View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4763-Insertion-9 (Length: 585)
Name: NF4763-Insertion-9
Description: NF4763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4763-Insertion-9 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 487; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 487; E-Value: 0
Query Start/End: Original strand, 8 - 585
Target Start/End: Original strand, 10594637 - 10595212
Alignment:
| Q |
8 |
ataactttgtttttgaaacatgtacataaggaacatgttttcaaacaaatttaattcaacataaacataaagttaaacgacaaagcctacaactaaagca |
107 |
Q |
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| T |
10594637 |
ataactttgtttttgaaacatgtatataaggaacatgttttcaaacaaatttcattcaacataaacataaagttaaacgacaaagcctacaactaaagca |
10594736 |
T |
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| Q |
108 |
cacaagtacacttttattttatctcttcttgggttggtggtttgattttgcatcgataaattttcttttggattgtgtggaaggaccattggctggattt |
207 |
Q |
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| T |
10594737 |
cacaactacacttttatttaatctcttcttgggttggtggtttgattttgcatcgataaattttcttttggattgtgtggtaggatctttggctggattt |
10594836 |
T |
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| Q |
208 |
ttgtgtacctgttttgttaatgtaagtcatgcttttccttagctatgttatatcgtgtatagtatagataataaaatataggaaaggtttgtgtatgtta |
307 |
Q |
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| T |
10594837 |
ttgtgtacctgttttgttaatgtaagtcatgcttttccttggctatgttatatcgtgtatagtatagataatagaatataggaaaggtttttgtatgtta |
10594936 |
T |
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| Q |
308 |
aattccctgtataatagcagtacaactttgtgaaccaggaatgtgttgaattttgtaaattttgatgtagtataatagtgagaagctctggagaaattac |
407 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| |
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| T |
10594937 |
aattccctgtataatagcagtacaactttgtgaaccaggaatgtgttgaattttg-aaattttgatgtagtataatagtgagaagctctagagatattac |
10595035 |
T |
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| Q |
408 |
caaattgttttgcctatgtaataaaaaagatcctcagatgtgtttgcttcatattgtttgaattggaggaaatgatgtgcttgatgcgtgccttattgtt |
507 |
Q |
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| T |
10595036 |
caaattgttttgcctatgtaataaaaaagatcctcagatgtgtttgcttcatattgtttgaattggaggaaatgatgtgcttgatgtatgccttattgtt |
10595135 |
T |
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| Q |
508 |
gtaacc-aaaaaatgcagttttttatgccaaaagatgataggatatttggatctataggaccaagaaggaatttattgt |
585 |
Q |
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| T |
10595136 |
gtaaccaaaaaaatgcagttttttatgcc-aaagatgataggatattaggatctataggaccaagaa-gaatttattgt |
10595212 |
T |
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