View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4763_high_3 (Length: 347)
Name: NF4763_high_3
Description: NF4763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4763_high_3 |
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Alignment Details
Target: chr3 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 10 - 332
Target Start/End: Original strand, 52409693 - 52410015
Alignment:
| Q |
10 |
gcagagaagaggaaaggcgtggaatatgatgttttttgtgctcaaattcaagagattagttggccatgtttaaacacaactactatcaagaatcaagata |
109 |
Q |
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| T |
52409693 |
gcagagaagaggaaaggcgtggaatatgatgttttttgtgctcaaattcaagagattagttggccatgtttaaacacaactactatcaagaatcaagata |
52409792 |
T |
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| Q |
110 |
tatagaataatagcaactgctactacttgagtgttttttattataatataaactagagtcaagttttgacaaccaaacatttgatttggtttatcgatcg |
209 |
Q |
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| T |
52409793 |
tatagaataatagcaactgctactacttgagtgttttttattataatataaactagagtcaagttttgacaaccaaacatttgatttggtttatcgatcg |
52409892 |
T |
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| Q |
210 |
gttgttggatggttgttatttatagccattcgtgtttgtttcatctggctagcttgctgtgtatatatacattatttactaagaagtcatattatgtggt |
309 |
Q |
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| T |
52409893 |
gttgttggatggttgttatatatagccattcgtgtttgtttgatctggctagcttgctgtgtatatatacattatttactaagaagtcagattatgtggt |
52409992 |
T |
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| Q |
310 |
ggcaatataggctgacatgaaac |
332 |
Q |
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| T |
52409993 |
ggcaatataggctgacatgaaac |
52410015 |
T |
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