View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4764-Insertion-1 (Length: 1040)

Name: NF4764-Insertion-1
Description: NF4764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4764-Insertion-1
NF4764-Insertion-1
[»] chr2 (5 HSPs)
chr2 (8-602)||(13335123-13335717)
chr2 (666-793)||(13335781-13335907)
chr2 (787-888)||(31409672-31409773)
chr2 (787-875)||(26449096-26449184)
chr2 (787-824)||(2985467-2985504)
[»] chr8 (6 HSPs)
chr8 (788-1026)||(40173138-40173373)
chr8 (788-1026)||(23820231-23820466)
chr8 (787-920)||(16395562-16395695)
chr8 (787-912)||(765511-765636)
chr8 (787-838)||(23103106-23103157)
chr8 (816-889)||(29729317-29729390)
[»] chr4 (17 HSPs)
chr4 (787-1026)||(8540897-8541133)
chr4 (787-915)||(1068914-1069042)
chr4 (787-888)||(14209436-14209537)
chr4 (787-888)||(14217133-14217234)
chr4 (787-888)||(14210387-14210488)
chr4 (787-888)||(14211356-14211457)
chr4 (787-888)||(14212307-14212408)
chr4 (787-888)||(14213276-14213377)
chr4 (787-888)||(14214244-14214345)
chr4 (787-888)||(14215213-14215314)
chr4 (787-888)||(14218084-14218185)
chr4 (787-888)||(14219054-14219155)
chr4 (787-888)||(14220023-14220124)
chr4 (787-888)||(14220974-14221075)
chr4 (787-888)||(14216182-14216283)
chr4 (787-888)||(14221943-14222044)
chr4 (787-888)||(14222912-14223013)
[»] chr7 (6 HSPs)
chr7 (787-920)||(45124787-45124920)
chr7 (788-888)||(1971096-1971196)
chr7 (823-889)||(37362567-37362633)
chr7 (951-1026)||(45124927-45125000)
chr7 (788-831)||(46906630-46906673)
chr7 (788-826)||(29396441-29396479)
[»] chr3 (11 HSPs)
chr3 (787-920)||(18996222-18996355)
chr3 (787-920)||(18998761-18998894)
chr3 (789-915)||(53556786-53556912)
chr3 (787-890)||(19009619-19009721)
chr3 (787-901)||(29129133-29129247)
chr3 (804-886)||(53689261-53689343)
chr3 (951-1025)||(18996143-18996215)
chr3 (951-1025)||(18998682-18998754)
chr3 (833-888)||(52311622-52311677)
chr3 (838-888)||(12812874-12812924)
chr3 (787-824)||(25612617-25612654)
[»] scaffold0096 (1 HSPs)
scaffold0096 (787-915)||(32839-32967)
[»] chr1 (7 HSPs)
chr1 (810-915)||(6919576-6919681)
chr1 (812-915)||(27843660-27843763)
chr1 (810-877)||(38240176-38240243)
chr1 (787-901)||(29836242-29836356)
chr1 (787-887)||(40981563-40981663)
chr1 (787-887)||(50290436-50290536)
chr1 (787-824)||(45118531-45118568)
[»] chr6 (1 HSPs)
chr6 (787-847)||(25357557-25357617)


Alignment Details
Target: chr2 (Bit Score: 510; Significance: 0; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 510; E-Value: 0
Query Start/End: Original strand, 8 - 602
Target Start/End: Original strand, 13335123 - 13335717
Alignment:
Q  8 tatacatttctttctactcaaccctcagctccaccaattccagattctttcactattggaaatatcaaattaaatatgttaagtaatttagacaatatgt 107  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  13335123 tatacatttctttctactcaaccctcagctccaccaattcaagattctttcactattggaaatatcaaattaaatatgttaggtaatttagacaatgtgt 13335222  T
Q  108 atgttcctttactagaaaaagtttgcaatattcatccttgtttaatagagtgtcaaaggaaaaggacttcaaagtatgtagagtgggcttttacagcact 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13335223 atgttcctttactagaaaaagtttgcaatattcatccttgtttaatagagtgtcaaaggaaaaggactccaaagtatgtagagtgggcttttacagcact 13335322  T
Q  208 tggaagggttttgtatttcattgagatcacaaaagtggatgaaatgaatgaagaggagtttgaatggcttcaactattgtgggatgaagttcaagtgttt 307  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13335323 tggaagggtattgtatttccttgagatcacaaaagtggatgaaatgaatgaagaggagtttgaatggcttcaactattgtgggatgaagttcaagtgttt 13335422  T
Q  308 ggatttgacttgtcatggcttgcacctcaagttgaatttcttttcaattatgtggagaaaatgagcaaagtgaataagcttaaggaggnnnnnnngagcc 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||       |||||    
T  13335423 ggatttgacttgtcatggcttgcacctcaagttgaatttcttttcaattatgtggagaaaatgagcaaagtgaataagcttgaggaggaaaaaaagagcc 13335522  T
Q  408 tagaggtgagaatttaagaattaagcatggaattgtttgagacagaaaaggagatggaaagttccaaaggtgatttggaaagtttaagggtggaattggg 507  Q
    |||||||||| ||| ||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13335523 tagaggtgaggattcaagaattgagcatggaattgtttgagagagaaaaagagatggaaagttccaaaggtgatttggaaagtttaaggttggaattggg 13335622  T
Q  508 tgacttggtggaatcagaaaggttgcttaatatcaagcgtttgatgtaaaattctcttaaaagaatgagtctatatttttaagggctaattaggg 602  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13335623 tgacttgatggaatcagaaaggttgcttaatatcaagggtttgatgtaaaattttcttaaaagaatgagtctatatttttaagggctaattaggg 13335717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 666 - 793
Target Start/End: Original strand, 13335781 - 13335907
Alignment:
Q  666 taaagttctatccttagcaactttagattcctttgaaattagtctaaggtcaccatatcactatacctagggctgacgtggacagattctcattgactgc 765  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13335781 taaagttctatcctt-gcaactttagattcctttgaaattagtctaaggtcaccatatcactatacctagggctgacgtggacagattctcaatgactgc 13335879  T
Q  766 tattgtcaatttgttattgatctttata 793  Q
    ||||||||||||||||||||| ||||||    
T  13335880 tattgtcaatttgttattgatttttata 13335907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 787 - 888
Target Start/End: Complemental strand, 31409773 - 31409672
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    |||||||| ||||  | ||||||||||  ||||||||| |||| | || | ||||||||||||||||||   ||||| | ||||||||||||||||||||    
T  31409773 ctttatatataatcctagcaaacatgcttaccctaatttccaaacccttaacctacttttttggctccaaactatccagaccgttagatcattgtaatta 31409674  T
Q  887 gg 888  Q
    ||    
T  31409673 gg 31409672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 787 - 875
Target Start/End: Original strand, 26449096 - 26449184
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagat 875  Q
    |||||||||||||  | ||||||||||  |||||||||||||| | ||||  ||| |||||||||||||  |||| ||| |||||||||    
T  26449096 ctttatatctaatcctagcaaacatgcttaccctaattgccaaaccctaattctaattttttggctccaaattattctgaccgttagat 26449184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 787 - 824
Target Start/End: Original strand, 2985467 - 2985504
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaatt 824  Q
    |||||||||||||||||||||||||||  |||||||||    
T  2985467 ctttatatctaatggttgcaaacatgcttaccctaatt 2985504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 183; Significance: 2e-98; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 183; E-Value: 2e-98
Query Start/End: Original strand, 788 - 1026
Target Start/End: Complemental strand, 40173373 - 40173138
Alignment:
Q  788 tttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaattag 887  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  40173373 tttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctatttttttggctccattttatcctggccgttagatcattgtaattag 40173274  T
Q  888 gaaaattaacacatcagccgttagatcattttaatttggaaatttgaaatccactattcccctctagactaccttgattaaaggacattgggtttaaaat 987  Q
    |||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||    
T  40173273 gaaaattagcacatcaaccgttagatcattttaattt-gaaatttgaaatccactattccctcctagactaccttgattaaaggacatt-ggtttaaaat 40173176  T
Q  988 gattatggaaccttcccatccacagttaattgaattatg 1026  Q
    |||||| ||| ||||||||||||| ||||||| ||||||    
T  40173175 gattattgaa-cttcccatccacaattaattgtattatg 40173138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 155; E-Value: 1e-81
Query Start/End: Original strand, 788 - 1026
Target Start/End: Original strand, 23820231 - 23820466
Alignment:
Q  788 tttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaattag 887  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||| ||  ||||||||||||||||||||    
T  23820231 tttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctatttttttggctcagttttatcgtgatcgttagatcattgtaattag 23820330  T
Q  888 gaaaattaacacatcagccgttagatcattttaatttggaaatttgaaatccactattcccctctagactaccttgattaaaggacattgggtttaaaat 987  Q
    |||||||| ||||||| | |||||||||||||||||| |||||||||||||||||||||||  ||| |||||||||||||||||||||| ||||||||||    
T  23820331 gaaaattagcacatcaactgttagatcattttaattt-gaaatttgaaatccactattccctcctaaactaccttgattaaaggacatt-ggtttaaaat 23820428  T
Q  988 gattatggaaccttcccatccacagttaattgaattatg 1026  Q
    |||||| ||| ||||||||||||| ||||||| ||||||    
T  23820429 gattattgaa-cttcccatccacaattaattgtattatg 23820466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 787 - 920
Target Start/End: Original strand, 16395562 - 16395695
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16395562 ctttatatctaatggttgcaaacatgcaaaccctaattgtcaacctctaaccctacttttttggctccattttatcctgaccgttagatcattgtaatta 16395661  T
Q  887 ggaaaattaacacatcagccgttagatcatttta 920  Q
    |||| |||| |||||||||  |||||||||||||    
T  16395662 ggaagattagcacatcagctcttagatcatttta 16395695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 787 - 912
Target Start/End: Original strand, 765511 - 765636
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    |||||||| |||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  765511 ctttatatttaatcgtagcaaacatgcaaaccctgattgccaacctctaaccctacttttttggctccattttatcctgatcgttagatccttgtaatta 765610  T
Q  887 ggaaaattaacacatcagccgttaga 912  Q
    |||| |||| ||||||||||||||||    
T  765611 ggaagattagcacatcagccgttaga 765636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 787 - 838
Target Start/End: Original strand, 23103106 - 23103157
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaacc 838  Q
    |||||||| ||||  | |||||||||||||||||| ||||||||||||||||    
T  23103106 ctttatatataatcctagcaaacatgcaaaccctacttgccaacctctaacc 23103157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 816 - 889
Target Start/End: Complemental strand, 29729390 - 29729317
Alignment:
Q  816 accctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaattagga 889  Q
    |||||||||||||| |  ||| |||| ||||||||||||| |  |||| | || ||||||||||||||||||||    
T  29729390 accctaattgccaaaccttaaacctaattttttggctccaatcaatccagaccattagatcattgtaattagga 29729317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 180; Significance: 1e-96; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 180; E-Value: 1e-96
Query Start/End: Original strand, 787 - 1026
Target Start/End: Original strand, 8540897 - 8541133
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8540897 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccttacttttttggctccattttatcctggccgttagatcattgtaatta 8540996  T
Q  887 ggaaaattaacacatcagccgttagatcattttaatttggaaatttgaaatccactattcccctctagactaccttgattaaaggacattgggtttaaaa 986  Q
    ||||||||| ||||||| |||||||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||||    
T  8540997 ggaaaattagcacatcaaccgttagatcattttaattt-gaaatttgaaatcctctattccctcctagactaccttgattaaaggacatt-ggtttaaaa 8541094  T
Q  987 tgattatggaaccttcccatccacagttaattgaattatg 1026  Q
    ||||||| ||| ||||||||||||| ||||||| ||||||    
T  8541095 tgattattgaa-cttcccatccacaattaattgtattatg 8541133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 787 - 915
Target Start/End: Complemental strand, 1069042 - 1068914
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  1069042 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctgactgttagatcattgtaatta 1068943  T
Q  887 ggaaaattaacacatcagccgttagatca 915  Q
    |||| |||| |||||||||||||||||||    
T  1068942 ggaagattagcacatcagccgttagatca 1068914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 787 - 888
Target Start/End: Complemental strand, 14209537 - 14209436
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    ||||||||||||| || ||||||||||  ||||||||| |||| | || | ||||||||||||||||||   ||||| | ||||||||||||||||||||    
T  14209537 ctttatatctaatcgtagcaaacatgcttaccctaatttccaaacccttaacctacttttttggctccaaactatccagaccgttagatcattgtaatta 14209438  T
Q  887 gg 888  Q
    ||    
T  14209437 gg 14209436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 787 - 888
Target Start/End: Complemental strand, 14217234 - 14217133
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    ||||||||||||| || ||||||||||  ||||||||| |||| | || | ||||||||||||||||||   ||||| | ||||||||||||||||||||    
T  14217234 ctttatatctaatcgtagcaaacatgcttaccctaatttccaaacccttaacctacttttttggctccaaactatccagaccgttagatcattgtaatta 14217135  T
Q  887 gg 888  Q
    ||    
T  14217134 gg 14217133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 787 - 888
Target Start/End: Complemental strand, 14210488 - 14210387
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    |||||||||||||  | ||||||||||  ||||||||| |||| | || | ||||||||||||||||||   ||||| | ||||||||||||||||||||    
T  14210488 ctttatatctaatcctagcaaacatgcttaccctaatttccaaacccttaacctacttttttggctccaaactatccagaccgttagatcattgtaatta 14210389  T
Q  887 gg 888  Q
    ||    
T  14210388 gg 14210387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 787 - 888
Target Start/End: Complemental strand, 14211457 - 14211356
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    |||||||||||||  | ||||||||||  ||||||||| |||| | || | ||||||||||||||||||   ||||| | ||||||||||||||||||||    
T  14211457 ctttatatctaatcctagcaaacatgcttaccctaatttccaaacccttaacctacttttttggctccaaactatccagaccgttagatcattgtaatta 14211358  T
Q  887 gg 888  Q
    ||    
T  14211357 gg 14211356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 787 - 888
Target Start/End: Complemental strand, 14212408 - 14212307
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    |||||||||||||  | ||||||||||  ||||||||| |||| | || | ||||||||||||||||||   ||||| | ||||||||||||||||||||    
T  14212408 ctttatatctaatcctagcaaacatgcttaccctaatttccaaacccttaacctacttttttggctccaaactatccagaccgttagatcattgtaatta 14212309  T
Q  887 gg 888  Q
    ||    
T  14212308 gg 14212307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 787 - 888
Target Start/End: Complemental strand, 14213377 - 14213276
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    |||||||||||||  | ||||||||||  ||||||||| |||| | || | ||||||||||||||||||   ||||| | ||||||||||||||||||||    
T  14213377 ctttatatctaatcctagcaaacatgcttaccctaatttccaaacccttaacctacttttttggctccaaactatccagaccgttagatcattgtaatta 14213278  T
Q  887 gg 888  Q
    ||    
T  14213277 gg 14213276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 787 - 888
Target Start/End: Complemental strand, 14214345 - 14214244
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    |||||||||||||  | ||||||||||  ||||||||| |||| | || | ||||||||||||||||||   ||||| | ||||||||||||||||||||    
T  14214345 ctttatatctaatcctagcaaacatgcttaccctaatttccaaacccttaacctacttttttggctccaaactatccagaccgttagatcattgtaatta 14214246  T
Q  887 gg 888  Q
    ||    
T  14214245 gg 14214244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 787 - 888
Target Start/End: Complemental strand, 14215314 - 14215213
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    |||||||||||||  | ||||||||||  ||||||||| |||| | || | ||||||||||||||||||   ||||| | ||||||||||||||||||||    
T  14215314 ctttatatctaatcctagcaaacatgcttaccctaatttccaaacccttaacctacttttttggctccaaactatccagaccgttagatcattgtaatta 14215215  T
Q  887 gg 888  Q
    ||    
T  14215214 gg 14215213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 787 - 888
Target Start/End: Complemental strand, 14218185 - 14218084
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    |||||||||||||  | ||||||||||  ||||||||| |||| | || | ||||||||||||||||||   ||||| | ||||||||||||||||||||    
T  14218185 ctttatatctaatcctagcaaacatgcttaccctaatttccaaacccttaacctacttttttggctccaaactatccagaccgttagatcattgtaatta 14218086  T
Q  887 gg 888  Q
    ||    
T  14218085 gg 14218084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 787 - 888
Target Start/End: Complemental strand, 14219155 - 14219054
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    |||||||||||||  | ||||||||||  ||||||||| |||| | || | ||||||||||||||||||   ||||| | ||||||||||||||||||||    
T  14219155 ctttatatctaatcctagcaaacatgcttaccctaatttccaaacccttaacctacttttttggctccaaactatccagaccgttagatcattgtaatta 14219056  T
Q  887 gg 888  Q
    ||    
T  14219055 gg 14219054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 787 - 888
Target Start/End: Complemental strand, 14220124 - 14220023
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    |||||||||||||  | ||||||||||  ||||||||| |||| | || | ||||||||||||||||||   ||||| | ||||||||||||||||||||    
T  14220124 ctttatatctaatcctagcaaacatgcttaccctaatttccaaacccttaacctacttttttggctccaaactatccagaccgttagatcattgtaatta 14220025  T
Q  887 gg 888  Q
    ||    
T  14220024 gg 14220023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 787 - 888
Target Start/End: Complemental strand, 14221075 - 14220974
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    |||||||||||||  | ||||||||||  ||||||||| |||| | || | ||||||||||||||||||   ||||| | ||||||||||||||||||||    
T  14221075 ctttatatctaatcctagcaaacatgcttaccctaatttccaaacccttaacctacttttttggctccaaactatccagaccgttagatcattgtaatta 14220976  T
Q  887 gg 888  Q
    ||    
T  14220975 gg 14220974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 787 - 888
Target Start/End: Complemental strand, 14216283 - 14216182
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    |||||||| ||||  | ||||||||||  ||||||||| |||| | || | ||||||||||||||||||   ||||| | ||||||||||||||||||||    
T  14216283 ctttatatataatcctagcaaacatgcttaccctaatttccaaacccttaacctacttttttggctccaaactatccagaccgttagatcattgtaatta 14216184  T
Q  887 gg 888  Q
    ||    
T  14216183 gg 14216182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 787 - 888
Target Start/End: Complemental strand, 14222044 - 14221943
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    |||||||||||||  | ||||||||||  ||||||||| |||| | || | ||||||||||||||||||   ||||| | ||||||||||||| ||||||    
T  14222044 ctttatatctaatcctagcaaacatgcttaccctaatttccaaacccttaacctacttttttggctccaaactatccagaccgttagatcattttaatta 14221945  T
Q  887 gg 888  Q
    ||    
T  14221944 gg 14221943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 787 - 888
Target Start/End: Complemental strand, 14223013 - 14222912
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    |||||||||||||  | ||||||||||  ||||||||| |||| | || | ||||||||||||||||||   ||||| | || |||||||||||||||||    
T  14223013 ctttatatctaatcctagcaaacatgcttaccctaatttccaaacccttaacctacttttttggctccaaactatccagaccattagatcattgtaatta 14222914  T
Q  887 gg 888  Q
    ||    
T  14222913 gg 14222912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 106; Significance: 2e-52; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 787 - 920
Target Start/End: Original strand, 45124787 - 45124920
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||| || |||    
T  45124787 ctttatatctaatgtttgcaaacatgcaaaccctaattcccaacctctaaccctacttttttggctccattttatcgtgaccgttagatcattttagtta 45124886  T
Q  887 ggaaaattaacacatcagccgttagatcatttta 920  Q
    ||||||||| ||||||||||||||||||||||||    
T  45124887 ggaaaattagcacatcagccgttagatcatttta 45124920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 788 - 888
Target Start/End: Original strand, 1971096 - 1971196
Alignment:
Q  788 tttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaattag 887  Q
    ||||||||||||  | ||||||||||  ||||||||| |||| | ||||  ||||||||||||||||| | ||||| | ||||||||||||| |||||||    
T  1971096 tttatatctaatcctagcaaacatgcttaccctaatttccaaaccctaaatctacttttttggctccaatctatccagaccgttagatcattataattag 1971195  T
Q  888 g 888  Q
    |    
T  1971196 g 1971196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 823 - 889
Target Start/End: Complemental strand, 37362633 - 37362567
Alignment:
Q  823 ttgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaattagga 889  Q
    ||||||| |||||| |||||||||||||||||| | ||||| |  ||||||||||||||||||||||    
T  37362633 ttgccaaactctaaacctacttttttggctccaatctatccagatcgttagatcattgtaattagga 37362567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 951 - 1026
Target Start/End: Original strand, 45124927 - 45125000
Alignment:
Q  951 ctagactaccttgattaaaggacattgggtttaaaatgattatggaaccttcccatccacagttaattgaattatg 1026  Q
    |||||||||||||||| ||||||||| |||||||||| ||||| |||  |||||||||||| ||||||| ||||||    
T  45124927 ctagactaccttgattcaaggacatt-ggtttaaaattattattgaa-tttcccatccacaattaattgtattatg 45125000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 788 - 831
Target Start/End: Original strand, 46906630 - 46906673
Alignment:
Q  788 tttatatctaatggttgcaaacatgcaaaccctaattgccaacc 831  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||    
T  46906630 tttatatctaatggttgcaaacatgcttaccctaattgctaacc 46906673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 788 - 826
Target Start/End: Complemental strand, 29396479 - 29396441
Alignment:
Q  788 tttatatctaatggttgcaaacatgcaaaccctaattgc 826  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  29396479 tttatatctaatggttgcaaacatgcttaccctaattgc 29396441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 4e-50; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 787 - 920
Target Start/End: Complemental strand, 18996355 - 18996222
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||| || |||    
T  18996355 ctttatatctaatgtttgcaaacatgcaaaccctaattcccaacctctaaccctacttttttggctccattttatcgtgaccgttagatcattttagtta 18996256  T
Q  887 ggaaaattaacacatcagccgttagatcatttta 920  Q
    |||| |||| ||||||||||||||||||||||||    
T  18996255 ggaagattagcacatcagccgttagatcatttta 18996222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 787 - 920
Target Start/End: Complemental strand, 18998894 - 18998761
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||| || |||    
T  18998894 ctttatatctaatgtttgcaaacatgcaaaccctaattcccaacctctaaccctacttttttggctccattttatcgtgaccgttagatcattttagtta 18998795  T
Q  887 ggaaaattaacacatcagccgttagatcatttta 920  Q
    |||| |||| ||||||||||||||||||||||||    
T  18998794 ggaagattagcacatcagccgttagatcatttta 18998761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 789 - 915
Target Start/End: Complemental strand, 53556912 - 53556786
Alignment:
Q  789 ttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaattagg 888  Q
    |||||||||||  | ||| | || |||||||||||||||||||||||||||||||||||| ||||||||||||| || | |||||||| ||||||||| |    
T  53556912 ttatatctaatcctagcagaaatacaaaccctaattgccaacctctaaccctacttttttagctccattttatcgtgactgttagatcgttgtaattaag 53556813  T
Q  889 aaaattaacacatcagccgttagatca 915  Q
    || |||| ||| |||||||||||||||    
T  53556812 aagattagcacttcagccgttagatca 53556786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 787 - 890
Target Start/End: Complemental strand, 19009721 - 19009619
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    |||||||||||||  | ||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||| | ||||||    
T  19009721 ctttatatctaatcctagcaaacaagcaaaccctaattgccaacctctaaacctac-tttttggctccattttatcctgaccgttagatcaatctaatta 19009623  T
Q  887 ggaa 890  Q
    ||||    
T  19009622 ggaa 19009619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 787 - 901
Target Start/End: Original strand, 29129133 - 29129247
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    |||||||||||||  | |||||||||   |||||||||||||| | |||| |||||||||||||||||| | ||||||| ||||||||||| | ||||||    
T  29129133 ctttatatctaatcctagcaaacatgtttaccctaattgccaaaccctaaacctacttttttggctccaatctatcctgaccgttagatcaatctaatta 29129232  T
Q  887 ggaaaattaacacat 901  Q
    |||| |||| |||||    
T  29129233 ggaagattagcacat 29129247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 804 - 886
Target Start/End: Original strand, 53689261 - 53689343
Alignment:
Q  804 gcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    ||||||||||  |||||||||||||| | |||| |||||||||||||||||| | ||||||| ||||||||||||||||||||    
T  53689261 gcaaacatgcttaccctaattgccaaaccctaaacctacttttttggctccaatctatcctgaccgttagatcattgtaatta 53689343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 951 - 1025
Target Start/End: Complemental strand, 18996215 - 18996143
Alignment:
Q  951 ctagactaccttgattaaaggacattgggtttaaaatgattatggaaccttcccatccacagttaattgaattat 1025  Q
    |||||||||||||||||||||||||| |||||||||| ||||| ||| ||||||||||||| ||||||| |||||    
T  18996215 ctagactaccttgattaaaggacatt-ggtttaaaattattattgaa-cttcccatccacaattaattgtattat 18996143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 951 - 1025
Target Start/End: Complemental strand, 18998754 - 18998682
Alignment:
Q  951 ctagactaccttgattaaaggacattgggtttaaaatgattatggaaccttcccatccacagttaattgaattat 1025  Q
    |||||||||||||||||||||||||| |||||||||| ||||| ||| ||||||||||||| ||||||| |||||    
T  18998754 ctagactaccttgattaaaggacatt-ggtttaaaattattattgaa-cttcccatccacaattaattgtattat 18998682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 833 - 888
Target Start/End: Complemental strand, 52311677 - 52311622
Alignment:
Q  833 ctaaccctacttttttggctccattttatcctggccgttagatcattgtaattagg 888  Q
    |||| |||||||||||| ||||| | ||||||| ||||||||| ||||||||||||    
T  52311677 ctaaacctacttttttgcctccaatctatcctgaccgttagatgattgtaattagg 52311622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 838 - 888
Target Start/End: Complemental strand, 12812924 - 12812874
Alignment:
Q  838 cctacttttttggctccattttatcctggccgttagatcattgtaattagg 888  Q
    ||||||||||| |||||| | ||||| | ||||||||||||||||||||||    
T  12812924 cctacttttttcgctccaatctatccagaccgttagatcattgtaattagg 12812874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 787 - 824
Target Start/End: Original strand, 25612617 - 25612654
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaatt 824  Q
    |||||||||||||||||||||||||||  |||||||||    
T  25612617 ctttatatctaatggttgcaaacatgcttaccctaatt 25612654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 101; Significance: 2e-49; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 787 - 915
Target Start/End: Complemental strand, 32967 - 32839
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  32967 ctttatatctaatggttgcaaacatgcaaaccttaattgccaacctctaaccctacttttttggctccattttatcctgaccgttagatcattgtattta 32868  T
Q  887 ggaaaattaacacatcagccgttagatca 915  Q
     ||| |||| |||||||||||| ||||||    
T  32867 agaagattagcacatcagccgtcagatca 32839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 1e-40; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 810 - 915
Target Start/End: Original strand, 6919576 - 6919681
Alignment:
Q  810 atgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaattaggaaaattaacacatcagccgtt 909  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||| |||||||||||||    
T  6919576 atgcaaactctaattgccaacctctaaccctacttttttggctccattttattctgaccgttagatcattgtaattagaaaaattagcacatcagccgtt 6919675  T
Q  910 agatca 915  Q
    ||||||    
T  6919676 agatca 6919681  T

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Target: chr1; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 812 - 915
Target Start/End: Complemental strand, 27843763 - 27843660
Alignment:
Q  812 gcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaattaggaaaattaacacatcagccgttag 911  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||| |||||||||||||||    
T  27843763 gcaaaccctaattgccaacctccaaccctacttttttggctccattttatcctgaccgttagatcattgtaattaagaagattagcacatcagccgttag 27843664  T
Q  912 atca 915  Q
    ||||    
T  27843663 atca 27843660  T

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Target: chr1; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 810 - 877
Target Start/End: Complemental strand, 38240243 - 38240176
Alignment:
Q  810 atgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatca 877  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  38240243 atgcaaaccctaattgtcaacctctaaccctacttttttggctccattttatcctaaccgttagatca 38240176  T

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Target: chr1; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 787 - 901
Target Start/End: Original strand, 29836242 - 29836356
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    |||||||||||||  | |||||||||   |||||||||||||| | |||| |||||||||||||||||| | ||||||| ||||||||||| | ||||||    
T  29836242 ctttatatctaatcctagcaaacatgtttaccctaattgccaaaccctaaacctacttttttggctccaatctatcctgaccgttagatcaatctaatta 29836341  T
Q  887 ggaaaattaacacat 901  Q
    |||| |||| |||||    
T  29836342 ggaagattagcacat 29836356  T

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Target: chr1; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 787 - 887
Target Start/End: Complemental strand, 40981663 - 40981563
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    |||||||||||||  | ||||||||||  ||||||||| |||| | |||| |||||||||||||||||| | ||||| | ||||||||||||||||||||    
T  40981663 ctttatatctaatcctagcaaacatgcttaccctaatttccaaaccctaaacctacttttttggctccaatctatccagaccgttagatcattgtaatta 40981564  T
Q  887 g 887  Q
    |    
T  40981563 g 40981563  T

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Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 787 - 887
Target Start/End: Original strand, 50290436 - 50290536
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttttggctccattttatcctggccgttagatcattgtaatta 886  Q
    |||||||||||||  |  |||||||||  | ||||| | |||| | |||| |||| ||||||||||||| ||||||| | ||||||||||||| ||||||    
T  50290436 ctttatatctaatcctaacaaacatgcttaacctaaattccaaaccctaaacctatttttttggctccaatttatccagaccgttagatcattataatta 50290535  T
Q  887 g 887  Q
    |    
T  50290536 g 50290536  T

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Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 787 - 824
Target Start/End: Complemental strand, 45118568 - 45118531
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaatt 824  Q
    |||||||||||||||||||||||||||  |||||||||    
T  45118568 ctttatatctaatggttgcaaacatgcttaccctaatt 45118531  T

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Target: chr6 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 787 - 847
Target Start/End: Complemental strand, 25357617 - 25357557
Alignment:
Q  787 ctttatatctaatggttgcaaacatgcaaaccctaattgccaacctctaaccctacttttt 847  Q
    |||||||||||||||||||||||||||  ||||||||| |||| | |||| |||| |||||    
T  25357617 ctttatatctaatggttgcaaacatgcttaccctaattaccaaaccctaaacctaattttt 25357557  T

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