View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4764-Insertion-10 (Length: 510)
Name: NF4764-Insertion-10
Description: NF4764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4764-Insertion-10 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 464; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 464; E-Value: 0
Query Start/End: Original strand, 8 - 510
Target Start/End: Complemental strand, 897047 - 896544
Alignment:
| Q |
8 |
ccgtgtttccgagtaggttatgagacatgtaggattgagattggactattaaatcttaggacaccactttggtttaggtattgatttgtgttgtcttaac |
107 |
Q |
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| T |
897047 |
ccgtgtttccgagtaggttatgatacatgtaggattgagattggactattaaatcttaggacaccactttggttgaggtattgatttgtgttgtcttaac |
896948 |
T |
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| Q |
108 |
aattttattgtgttatttgatttgtgttgtcttaaggcttttgattaccctaagg-gtcaatagttgttgcatttgttgttactcaatagcagcaagatt |
206 |
Q |
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| T |
896947 |
atttttattgtgttatttgatttgtgttgtcgtaaggcttttgattaccctaagatgtcaatagttgttgcatttgttgttactcaatagcagcaagatt |
896848 |
T |
|
| Q |
207 |
ctggtgttcaatgtaccaattatacgtttcattctattatatatatgtaagtgatttattatgatatgtcaaccaatttaattggtttatcttctgacat |
306 |
Q |
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| T |
896847 |
ctggtgttcaatgtaccaattatacgtttcattctattatatatatgtaagtgatttattatgatatgtcaaccaatttaattggtttatcttctgacat |
896748 |
T |
|
| Q |
307 |
gtgtaatatatgttatgtttgctcacctttttgcgttcattctaattatcagttgctttcagcaacaaaggtgattagaatttaaagggggcacatgagt |
406 |
Q |
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| T |
896747 |
gtgtaatatatgttatgtttgctcacctttttgcgttcattctaattatcagttgctttcagcaacaaaggtgattagaatttaaagggggcacatgagt |
896648 |
T |
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| Q |
407 |
ttgcttgtttgtgaccttgaatgaattaatagggaccatcaaattcttcaacttcttgttccaaatttcagtttctgtaatcattcctacaagtatatat |
506 |
Q |
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| T |
896647 |
ttgcttgtttgtgaccttgaatgaattaacagggaccatcaaattcttcgacttcttgttccaaatttcagtttatgtaatcattcctacaagtatatat |
896548 |
T |
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| Q |
507 |
gtgg |
510 |
Q |
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| T |
896547 |
gtgg |
896544 |
T |
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