View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4764-Insertion-8 (Length: 671)

Name: NF4764-Insertion-8
Description: NF4764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4764-Insertion-8
NF4764-Insertion-8
[»] chr1 (85 HSPs)
chr1 (107-418)||(50883766-50884077)
chr1 (418-578)||(34756427-34756586)
chr1 (416-579)||(50005077-50005239)
chr1 (414-579)||(38277411-38277574)
chr1 (416-576)||(15034657-15034816)
chr1 (456-579)||(40264068-40264190)
chr1 (418-576)||(4038077-4038234)
chr1 (413-576)||(44410306-44410468)
chr1 (416-574)||(27804269-27804426)
chr1 (421-539)||(45565397-45565515)
chr1 (456-576)||(32572960-32573079)
chr1 (418-576)||(15034661-15034818)
chr1 (416-576)||(4038073-4038232)
chr1 (420-553)||(28745799-28745931)
chr1 (456-576)||(23536069-23536188)
chr1 (456-553)||(37214843-37214939)
chr1 (450-539)||(5474437-5474526)
chr1 (456-576)||(27935523-27935642)
chr1 (423-578)||(28745797-28745950)
chr1 (416-493)||(23536065-23536142)
chr1 (416-505)||(31166308-31166397)
chr1 (420-573)||(34756432-34756584)
chr1 (418-493)||(30190220-30190295)
chr1 (422-576)||(27804269-27804422)
chr1 (418-502)||(24273209-24273293)
chr1 (418-505)||(6470672-6470759)
chr1 (415-502)||(8224765-8224852)
chr1 (416-502)||(26501068-26501154)
chr1 (488-576)||(30190206-30190293)
chr1 (420-576)||(38277417-38277571)
chr1 (420-576)||(50005081-50005236)
chr1 (421-500)||(37036940-37037019)
chr1 (415-502)||(28632575-28632661)
chr1 (427-502)||(37448390-37448465)
chr1 (420-539)||(40264068-40264187)
chr1 (456-575)||(45565397-45565515)
chr1 (415-497)||(29446747-29446828)
chr1 (419-539)||(32572960-32573080)
chr1 (418-502)||(47165201-47165285)
chr1 (415-502)||(49659214-49659300)
chr1 (415-493)||(27935569-27935647)
chr1 (415-505)||(43622964-43623054)
chr1 (415-553)||(44410335-44410473)
chr1 (456-535)||(17502222-17502301)
chr1 (427-502)||(44570687-44570762)
chr1 (491-553)||(25889182-25889243)
chr1 (456-505)||(15245480-15245529)
chr1 (417-490)||(32287934-32288007)
chr1 (417-505)||(10166498-10166586)
chr1 (414-502)||(39887123-39887211)
chr1 (418-492)||(49216337-49216412)
chr1 (502-576)||(24273218-24273291)
chr1 (436-502)||(31195474-31195540)
chr1 (425-502)||(37447891-37447968)
chr1 (434-502)||(946929-946997)
chr1 (502-553)||(31195480-31195531)
chr1 (502-576)||(6470684-6470757)
chr1 (502-576)||(8224770-8224843)
chr1 (411-453)||(17502191-17502233)
chr1 (502-576)||(26501077-26501150)
chr1 (502-576)||(47165210-47165283)
chr1 (11-45)||(50883670-50883704)
chr1 (507-576)||(43622981-43623049)
chr1 (418-502)||(946376-946458)
chr1 (511-575)||(37036956-37037019)
chr1 (441-493)||(37214842-37214894)
chr1 (415-458)||(5474414-5474457)
chr1 (418-493)||(25889158-25889232)
chr1 (502-553)||(37448399-37448450)
chr1 (502-576)||(49659219-49659291)
chr1 (415-453)||(15245457-15245495)
chr1 (456-502)||(44571239-44571285)
chr1 (456-502)||(48953607-48953652)
chr1 (456-502)||(52135614-52135660)
chr1 (445-502)||(15467952-15468009)
chr1 (456-501)||(32128068-32128113)
chr1 (523-576)||(32287952-32288004)
chr1 (421-502)||(51847855-51847935)
chr1 (520-553)||(52280969-52281002)
chr1 (520-552)||(946400-946432)
chr1 (502-578)||(28632584-28632658)
chr1 (418-502)||(32647301-32647385)
chr1 (413-453)||(37447379-37447419)
chr1 (415-447)||(41823186-41823218)
chr1 (411-447)||(48953580-48953616)
[»] chr2 (73 HSPs)
chr2 (413-578)||(41461515-41461679)
chr2 (416-535)||(27033488-27033607)
chr2 (418-576)||(784795-784952)
chr2 (418-576)||(14365702-14365858)
chr2 (411-576)||(41461508-41461672)
chr2 (456-576)||(14537201-14537320)
chr2 (426-553)||(11716432-11716550)
chr2 (416-576)||(14365698-14365856)
chr2 (416-495)||(17180295-17180374)
chr2 (415-576)||(784790-784950)
chr2 (415-539)||(11684596-11684711)
chr2 (417-539)||(14537198-14537320)
chr2 (415-502)||(10480116-10480203)
chr2 (411-502)||(13017772-13017863)
chr2 (415-493)||(17905651-17905729)
chr2 (418-539)||(10244177-10244298)
chr2 (414-502)||(33189246-33189334)
chr2 (492-579)||(44256181-44256266)
chr2 (411-502)||(1583798-1583889)
chr2 (418-493)||(11716408-11716483)
chr2 (416-502)||(769034-769120)
chr2 (420-502)||(11532242-11532324)
chr2 (420-502)||(11793897-11793979)
chr2 (456-539)||(11824718-11824801)
chr2 (416-502)||(11141303-11141389)
chr2 (410-502)||(3092274-3092366)
chr2 (456-539)||(3345783-3345867)
chr2 (418-502)||(45094460-45094544)
chr2 (416-502)||(7228001-7228087)
chr2 (416-502)||(39630223-39630308)
chr2 (502-579)||(11793894-11793970)
chr2 (460-576)||(27033492-27033607)
chr2 (421-501)||(28740599-28740679)
chr2 (426-502)||(30698289-30698365)
chr2 (418-502)||(35047668-35047752)
chr2 (451-553)||(14954290-14954393)
chr2 (502-576)||(11532251-11532324)
chr2 (419-500)||(30751338-30751418)
chr2 (424-505)||(40026070-40026151)
chr2 (420-493)||(44256191-44256263)
chr2 (454-501)||(11595355-11595402)
chr2 (510-576)||(17180299-17180364)
chr2 (456-505)||(21504488-21504537)
chr2 (445-502)||(32839637-32839694)
chr2 (520-576)||(7228028-7228083)
chr2 (523-575)||(28740599-28740650)
chr2 (438-505)||(740724-740791)
chr2 (454-501)||(11607257-11607304)
chr2 (523-574)||(11684603-11684653)
chr2 (444-502)||(7167656-7167714)
chr2 (456-502)||(8736430-8736476)
chr2 (502-576)||(10480121-10480194)
chr2 (502-576)||(13017781-13017854)
chr2 (416-478)||(14954264-14954326)
chr2 (456-493)||(11684674-11684711)
chr2 (456-576)||(10244179-10244298)
chr2 (414-502)||(11606709-11606797)
chr2 (523-570)||(11716504-11716550)
chr2 (502-576)||(769038-769111)
chr2 (502-576)||(1583807-1583880)
chr2 (418-488)||(8735844-8735914)
chr2 (456-502)||(20935744-20935790)
chr2 (502-576)||(33189255-33189328)
chr2 (514-576)||(39630227-39630288)
chr2 (502-572)||(40026070-40026139)
chr2 (523-576)||(11141307-11141359)
chr2 (456-493)||(11824718-11824755)
chr2 (423-464)||(39477976-39478017)
chr2 (520-553)||(45094487-45094520)
chr2 (414-502)||(2274777-2274865)
chr2 (507-551)||(7167670-7167714)
chr2 (502-550)||(32839646-32839694)
chr2 (458-502)||(44255674-44255718)
[»] chr8 (73 HSPs)
chr8 (418-578)||(3853616-3853775)
chr8 (418-578)||(3858074-3858233)
chr8 (435-579)||(13404826-13404969)
chr8 (418-576)||(17110871-17111028)
chr8 (415-576)||(17110866-17111026)
chr8 (418-576)||(33902667-33902823)
chr8 (418-539)||(14799999-14800119)
chr8 (420-576)||(3853618-3853773)
chr8 (420-576)||(3858076-3858231)
chr8 (415-553)||(40046801-40046925)
chr8 (420-516)||(4156228-4156324)
chr8 (497-576)||(37268086-37268164)
chr8 (456-535)||(42739969-42740048)
chr8 (456-574)||(30435250-30435365)
chr8 (420-553)||(13404829-13404962)
chr8 (416-493)||(42711364-42711441)
chr8 (418-502)||(24044960-24045044)
chr8 (415-502)||(33377296-33377383)
chr8 (416-502)||(23011732-23011818)
chr8 (418-502)||(29257350-29257434)
chr8 (418-502)||(44889354-44889438)
chr8 (416-503)||(11744717-11744804)
chr8 (416-502)||(1088276-1088362)
chr8 (420-502)||(29482806-29482888)
chr8 (410-502)||(28324661-28324753)
chr8 (418-494)||(31807409-31807484)
chr8 (422-502)||(44346677-44346757)
chr8 (414-501)||(33986000-33986087)
chr8 (415-502)||(36103098-36103185)
chr8 (415-501)||(14236-14321)
chr8 (421-502)||(35979003-35979084)
chr8 (450-539)||(38573433-38573522)
chr8 (415-576)||(33902669-33902828)
chr8 (416-475)||(14991690-14991749)
chr8 (418-493)||(37268091-37268166)
chr8 (434-493)||(40046874-40046933)
chr8 (456-576)||(42711324-42711437)
chr8 (418-502)||(515531-515615)
chr8 (438-502)||(15186816-15186880)
chr8 (410-466)||(32626069-32626125)
chr8 (523-578)||(4156272-4156326)
chr8 (435-502)||(8049271-8049338)
chr8 (418-501)||(9982637-9982719)
chr8 (415-502)||(28190702-28190788)
chr8 (523-576)||(14800065-14800117)
chr8 (411-478)||(8689125-8689192)
chr8 (451-502)||(13144616-13144667)
chr8 (416-463)||(27322687-27322734)
chr8 (422-481)||(30435250-30435309)
chr8 (456-502)||(26520438-26520484)
chr8 (456-502)||(30444932-30444978)
chr8 (456-502)||(34008819-34008865)
chr8 (456-492)||(7202885-7202921)
chr8 (523-578)||(8689132-8689186)
chr8 (502-553)||(9982660-9982711)
chr8 (502-553)||(23011758-23011809)
chr8 (502-577)||(29482815-29482889)
chr8 (450-493)||(32626023-32626066)
chr8 (510-553)||(40046828-40046871)
chr8 (415-453)||(14799976-14800014)
chr8 (502-576)||(24044962-24045035)
chr8 (502-576)||(29257359-29257432)
chr8 (456-502)||(29611408-29611454)
chr8 (502-576)||(33377305-33377378)
chr8 (502-576)||(44889356-44889429)
chr8 (508-553)||(8049278-8049323)
chr8 (523-576)||(14991694-14991746)
chr8 (456-505)||(24510273-24510322)
chr8 (523-576)||(28324691-28324743)
chr8 (451-492)||(31980492-31980533)
chr8 (413-453)||(30444963-30445003)
chr8 (434-502)||(35404741-35404809)
chr8 (502-574)||(44346686-44346757)
[»] chr4 (79 HSPs)
chr4 (418-578)||(10127974-10128133)
chr4 (418-576)||(15660185-15660342)
chr4 (416-579)||(42844541-42844703)
chr4 (420-576)||(7352814-7352969)
chr4 (414-576)||(28845867-28846028)
chr4 (418-576)||(41498489-41498647)
chr4 (418-576)||(1107053-1107211)
chr4 (445-576)||(857266-857396)
chr4 (456-578)||(26250909-26251030)
chr4 (415-576)||(7352814-7352974)
chr4 (418-515)||(36455907-36456004)
chr4 (411-550)||(857266-857405)
chr4 (411-576)||(4896650-4896798)
chr4 (456-576)||(11040970-11041088)
chr4 (413-576)||(15660178-15660340)
chr4 (418-493)||(49111396-49111471)
chr4 (418-535)||(14982280-14982396)
chr4 (418-578)||(4896648-4896791)
chr4 (418-553)||(28845895-28846030)
chr4 (418-502)||(31473849-31473933)
chr4 (488-576)||(49111382-49111469)
chr4 (415-492)||(1112602-1112679)
chr4 (419-539)||(4441338-4441449)
chr4 (420-576)||(10127976-10128131)
chr4 (415-539)||(26250906-26251030)
chr4 (412-496)||(36456007-36456091)
chr4 (415-576)||(1107048-1107209)
chr4 (421-502)||(10633035-10633116)
chr4 (418-502)||(2125857-2125941)
chr4 (416-492)||(41498575-41498651)
chr4 (413-491)||(11040963-11041040)
chr4 (418-495)||(1112704-1112781)
chr4 (420-553)||(42844567-42844700)
chr4 (426-502)||(1539649-1539725)
chr4 (418-489)||(5715744-5715815)
chr4 (418-487)||(11348327-11348396)
chr4 (456-524)||(12914051-12914119)
chr4 (460-576)||(14982282-14982396)
chr4 (418-502)||(16516171-16516255)
chr4 (418-502)||(35470122-35470206)
chr4 (416-502)||(41139473-41139557)
chr4 (489-535)||(46724195-46724241)
chr4 (418-500)||(55266852-55266934)
chr4 (445-502)||(29091164-29091221)
chr4 (410-467)||(31742874-31742931)
chr4 (502-576)||(2125859-2125932)
chr4 (456-502)||(53760779-53760825)
chr4 (507-576)||(31473851-31473919)
chr4 (508-577)||(31742777-31742845)
chr4 (507-575)||(10633035-10633102)
chr4 (436-504)||(12169037-12169104)
chr4 (450-502)||(26534525-26534577)
chr4 (416-492)||(52493924-52493998)
chr4 (418-493)||(467887-467960)
chr4 (420-487)||(31742778-31742845)
chr4 (507-553)||(1539665-1539711)
chr4 (456-502)||(42775643-42775689)
chr4 (507-576)||(1112607-1112675)
chr4 (523-576)||(4441339-4441391)
chr4 (511-576)||(16516173-16516237)
chr4 (456-501)||(21012566-21012611)
chr4 (523-576)||(36455909-36455961)
chr4 (420-465)||(42542979-42543024)
chr4 (450-501)||(16300209-16300260)
chr4 (523-578)||(19461755-19461809)
chr4 (420-502)||(19461725-19461807)
chr4 (502-576)||(35470124-35470197)
chr4 (416-502)||(42776635-42776721)
chr4 (456-493)||(4441412-4441449)
chr4 (437-494)||(10354361-10354418)
chr4 (523-576)||(11348342-11348394)
chr4 (451-492)||(21012494-21012535)
chr4 (502-539)||(21012574-21012611)
chr4 (420-453)||(46243115-46243148)
chr4 (542-579)||(46724230-46724266)
chr4 (502-550)||(29091164-29091212)
chr4 (528-576)||(31742874-31742921)
chr4 (416-502)||(31947588-31947675)
chr4 (438-502)||(46242533-46242597)
[»] chr7 (72 HSPs)
chr7 (413-576)||(5644672-5644834)
chr7 (416-576)||(29065817-29065976)
chr7 (416-576)||(40110735-40110895)
chr7 (424-576)||(21635887-21636038)
chr7 (410-576)||(2057397-2057562)
chr7 (415-579)||(43955514-43955674)
chr7 (450-579)||(46069423-46069548)
chr7 (415-576)||(2057392-2057552)
chr7 (415-576)||(40110739-40110900)
chr7 (420-576)||(43955519-43955671)
chr7 (414-553)||(34388261-34388400)
chr7 (422-576)||(49052788-49052937)
chr7 (418-553)||(5644701-5644836)
chr7 (418-553)||(29065843-29065978)
chr7 (414-505)||(31632718-31632809)
chr7 (450-576)||(44915197-44915322)
chr7 (456-576)||(40854007-40854127)
chr7 (416-572)||(21635883-21636038)
chr7 (418-576)||(34388267-34388424)
chr7 (413-502)||(35776930-35777019)
chr7 (418-502)||(26162112-26162196)
chr7 (413-576)||(46481941-46482102)
chr7 (413-502)||(28539143-28539232)
chr7 (416-574)||(49052784-49052937)
chr7 (411-502)||(29639190-29639281)
chr7 (416-502)||(25189201-25189287)
chr7 (416-502)||(39342617-39342703)
chr7 (413-502)||(6498740-6498829)
chr7 (413-502)||(14603237-14603326)
chr7 (422-502)||(23455222-23455302)
chr7 (415-547)||(44915192-44915324)
chr7 (418-487)||(34398938-34399008)
chr7 (418-502)||(18789221-18789305)
chr7 (418-502)||(23548586-23548670)
chr7 (418-502)||(35455804-35455888)
chr7 (419-502)||(9784906-9784989)
chr7 (415-539)||(40854007-40854132)
chr7 (420-502)||(22391562-22391644)
chr7 (420-547)||(46069421-46069545)
chr7 (413-576)||(46481948-46482109)
chr7 (507-553)||(22391576-22391622)
chr7 (502-576)||(26162121-26162194)
chr7 (416-502)||(30524253-30524339)
chr7 (502-576)||(31632724-31632797)
chr7 (444-502)||(43791116-43791174)
chr7 (445-501)||(18789544-18789600)
chr7 (422-502)||(30629061-30629141)
chr7 (502-576)||(28539152-28539225)
chr7 (456-502)||(32650611-32650657)
chr7 (502-576)||(35776939-35777012)
chr7 (456-502)||(40495755-40495801)
chr7 (437-502)||(3905634-3905699)
chr7 (523-576)||(6498770-6498822)
chr7 (456-516)||(31913256-31913316)
chr7 (508-576)||(34398938-34399006)
chr7 (507-551)||(43791116-43791160)
chr7 (456-502)||(14790151-14790197)
chr7 (502-576)||(29639199-29639272)
chr7 (502-576)||(39342626-39342699)
chr7 (456-502)||(45984378-45984424)
chr7 (456-502)||(45988738-45988784)
chr7 (523-576)||(9784936-9784988)
chr7 (523-576)||(14603267-14603319)
chr7 (411-448)||(19865565-19865602)
chr7 (416-465)||(29195707-29195756)
chr7 (415-448)||(30080812-30080845)
chr7 (416-453)||(31913234-31913271)
chr7 (523-576)||(35455806-35455858)
chr7 (427-475)||(22351874-22351922)
chr7 (502-574)||(23455231-23455302)
chr7 (520-576)||(29195711-29195766)
chr7 (413-453)||(30587909-30587949)
[»] chr6 (33 HSPs)
chr6 (420-576)||(9763014-9763169)
chr6 (415-577)||(6919709-6919869)
chr6 (418-539)||(9285647-9285768)
chr6 (415-576)||(776082-776242)
chr6 (416-579)||(9763011-9763173)
chr6 (420-576)||(6919710-6919864)
chr6 (418-502)||(1368477-1368561)
chr6 (456-576)||(9285649-9285768)
chr6 (418-502)||(34244969-34245053)
chr6 (415-478)||(8574764-8574827)
chr6 (415-502)||(28918162-28918249)
chr6 (418-576)||(776080-776237)
chr6 (422-492)||(15299510-15299579)
chr6 (418-478)||(8574695-8574755)
chr6 (418-502)||(13487275-13487359)
chr6 (418-502)||(29889423-29889507)
chr6 (436-490)||(15299417-15299471)
chr6 (523-576)||(8574697-8574749)
chr6 (523-576)||(8574770-8574822)
chr6 (422-502)||(15832470-15832550)
chr6 (440-505)||(6358237-6358302)
chr6 (523-576)||(34244999-34245051)
chr6 (445-502)||(34364770-34364827)
chr6 (507-574)||(15299514-15299579)
chr6 (418-458)||(33733432-33733472)
chr6 (502-550)||(34364770-34364818)
chr6 (447-478)||(15299471-15299502)
chr6 (463-502)||(15616350-15616389)
chr6 (502-576)||(29889432-29889505)
chr6 (415-448)||(1195348-1195381)
chr6 (456-501)||(1195371-1195416)
chr6 (507-576)||(13487277-13487345)
chr6 (507-576)||(28918167-28918235)
[»] chr5 (87 HSPs)
chr5 (416-576)||(15373962-15374121)
chr5 (419-576)||(20523135-20523291)
chr5 (415-576)||(9764335-9764495)
chr5 (416-553)||(2316376-2316514)
chr5 (420-554)||(32389974-32390108)
chr5 (418-576)||(40809343-40809500)
chr5 (415-576)||(32470879-32471037)
chr5 (415-539)||(40643856-40643979)
chr5 (456-579)||(28828387-28828507)
chr5 (418-576)||(9764340-9764497)
chr5 (421-576)||(6634017-6634170)
chr5 (418-576)||(15373960-15374117)
chr5 (418-576)||(20523133-20523290)
chr5 (413-576)||(32389974-32390136)
chr5 (415-576)||(40809338-40809498)
chr5 (418-576)||(32470884-32471039)
chr5 (419-505)||(3563278-3563364)
chr5 (418-576)||(23091963-23092119)
chr5 (418-502)||(22766952-22767036)
chr5 (414-502)||(25935276-25935364)
chr5 (418-502)||(37722880-37722964)
chr5 (414-502)||(40090400-40090488)
chr5 (418-576)||(2316380-2316537)
chr5 (420-491)||(2721557-2721628)
chr5 (413-496)||(16515099-16515182)
chr5 (418-495)||(26281262-26281339)
chr5 (414-502)||(927298-927386)
chr5 (416-576)||(23091965-23092123)
chr5 (418-493)||(15804322-15804397)
chr5 (415-502)||(41762201-41762288)
chr5 (418-502)||(22303856-22303940)
chr5 (413-575)||(6634010-6634170)
chr5 (420-502)||(19533893-19533975)
chr5 (416-502)||(32250084-32250169)
chr5 (422-502)||(9894308-9894388)
chr5 (418-498)||(35379344-35379423)
chr5 (420-502)||(37145487-37145569)
chr5 (502-576)||(37722889-37722962)
chr5 (422-495)||(16515009-16515081)
chr5 (420-473)||(28828369-28828422)
chr5 (420-493)||(28828431-28828504)
chr5 (522-578)||(15804398-15804453)
chr5 (415-491)||(34982213-34982288)
chr5 (456-576)||(40643856-40643974)
chr5 (507-578)||(2721560-2721630)
chr5 (415-502)||(10314646-10314733)
chr5 (419-494)||(33245366-33245441)
chr5 (415-473)||(13243454-13243514)
chr5 (411-472)||(15804399-15804460)
chr5 (484-553)||(16515028-16515097)
chr5 (502-576)||(927304-927377)
chr5 (420-502)||(14834826-14834908)
chr5 (456-502)||(22305132-22305178)
chr5 (456-505)||(15270837-15270886)
chr5 (499-576)||(15804324-15804400)
chr5 (456-505)||(17542344-17542393)
chr5 (523-576)||(28828369-28828421)
chr5 (507-579)||(19533907-19533978)
chr5 (450-502)||(35111258-35111310)
chr5 (528-579)||(13243514-13243564)
chr5 (502-576)||(3563279-3563352)
chr5 (420-502)||(20320634-20320716)
chr5 (411-453)||(22305105-22305147)
chr5 (502-576)||(22766954-22767027)
chr5 (502-576)||(25935285-25935358)
chr5 (502-576)||(26281264-26281337)
chr5 (456-502)||(33146211-33146257)
chr5 (502-576)||(40090409-40090482)
chr5 (457-502)||(17492634-17492679)
chr5 (523-576)||(22303886-22303938)
chr5 (457-502)||(28490031-28490076)
chr5 (456-492)||(2550348-2550384)
chr5 (415-463)||(5658773-5658821)
chr5 (451-502)||(8255060-8255110)
chr5 (420-467)||(13243514-13243561)
chr5 (419-502)||(37090282-37090365)
chr5 (415-453)||(2550325-2550363)
chr5 (523-553)||(13243483-13243513)
chr5 (502-576)||(16515102-16515175)
chr5 (450-492)||(30519036-30519078)
chr5 (450-492)||(30559376-30559418)
chr5 (523-576)||(32250114-32250165)
chr5 (450-492)||(37241598-37241640)
chr5 (502-576)||(41762210-41762283)
chr5 (507-576)||(37145501-37145569)
chr5 (532-576)||(5658778-5658821)
chr5 (502-574)||(9894317-9894388)
[»] chr3 (75 HSPs)
chr3 (426-553)||(31070415-31070541)
chr3 (418-576)||(44692822-44692979)
chr3 (415-544)||(44436255-44436384)
chr3 (416-576)||(9129342-9129501)
chr3 (416-576)||(9137449-9137608)
chr3 (418-576)||(5415785-5415942)
chr3 (456-576)||(46429434-46429553)
chr3 (415-576)||(44692824-44692984)
chr3 (416-576)||(9129346-9129505)
chr3 (416-576)||(9137453-9137612)
chr3 (456-572)||(28092220-28092335)
chr3 (460-576)||(47284268-47284383)
chr3 (456-576)||(27251932-27252051)
chr3 (450-578)||(42130692-42130819)
chr3 (418-494)||(46672799-46672875)
chr3 (417-576)||(5415782-5415940)
chr3 (460-579)||(39215880-39215998)
chr3 (415-498)||(49457340-49457423)
chr3 (415-493)||(27251978-27252056)
chr3 (451-576)||(44436260-44436384)
chr3 (416-502)||(7302344-7302430)
chr3 (422-502)||(21307520-21307600)
chr3 (411-539)||(28092207-28092335)
chr3 (437-553)||(31070430-31070546)
chr3 (414-502)||(53129831-53129919)
chr3 (418-500)||(36397979-36398061)
chr3 (456-539)||(332012-332096)
chr3 (415-515)||(40929605-40929704)
chr3 (418-502)||(47767432-47767516)
chr3 (415-502)||(42005941-42006028)
chr3 (415-500)||(34088568-34088653)
chr3 (418-539)||(46429434-46429555)
chr3 (414-502)||(671607-671695)
chr3 (418-502)||(37054394-37054478)
chr3 (418-493)||(39110394-39110469)
chr3 (466-576)||(46672770-46672873)
chr3 (418-487)||(47284316-47284385)
chr3 (426-502)||(19475824-19475900)
chr3 (418-502)||(48947605-48947689)
chr3 (418-502)||(53470417-53470501)
chr3 (456-539)||(25655335-25655418)
chr3 (436-502)||(30766571-30766637)
chr3 (486-576)||(39110396-39110485)
chr3 (415-472)||(35279920-35279977)
chr3 (415-502)||(7976544-7976632)
chr3 (418-502)||(31189385-31189469)
chr3 (415-547)||(42130689-42130821)
chr3 (418-493)||(37321550-37321625)
chr3 (456-505)||(38506861-38506910)
chr3 (507-576)||(42005955-42006023)
chr3 (523-576)||(49457345-49457397)
chr3 (421-502)||(52527039-52527120)
chr3 (502-574)||(21307529-21307600)
chr3 (414-505)||(21730898-21730988)
chr3 (415-474)||(46001361-46001420)
chr3 (502-576)||(34088573-34088646)
chr3 (502-576)||(36397986-36398059)
chr3 (456-493)||(332012-332049)
chr3 (445-502)||(8762153-8762210)
chr3 (508-577)||(34396510-34396579)
chr3 (420-493)||(39215922-39215995)
chr3 (418-475)||(46635857-46635914)
chr3 (523-576)||(47767434-47767486)
chr3 (434-502)||(50168598-50168666)
chr3 (523-574)||(35279920-35279970)
chr3 (456-502)||(2104772-2104818)
chr3 (452-502)||(13176550-13176600)
chr3 (413-475)||(30767099-30767161)
chr3 (456-493)||(25655335-25655372)
chr3 (523-576)||(37054396-37054448)
chr3 (523-576)||(46001366-46001418)
chr3 (523-576)||(53470447-53470499)
chr3 (330-378)||(21264008-21264056)
chr3 (411-447)||(25655409-25655445)
chr3 (422-502)||(47336885-47336965)
[»] scaffold1562 (2 HSPs)
scaffold1562 (414-579)||(401-565)
scaffold1562 (420-576)||(407-562)
[»] scaffold1158 (2 HSPs)
scaffold1158 (414-579)||(2028-2192)
scaffold1158 (420-576)||(2031-2186)
[»] scaffold0044 (2 HSPs)
scaffold0044 (422-547)||(56304-56429)
scaffold0044 (450-574)||(56306-56429)
[»] scaffold0169 (2 HSPs)
scaffold0169 (415-502)||(4072-4159)
scaffold0169 (502-553)||(4099-4150)
[»] scaffold0048 (2 HSPs)
scaffold0048 (420-500)||(82945-83025)
scaffold0048 (502-576)||(82945-83018)
[»] scaffold0009 (4 HSPs)
scaffold0009 (418-497)||(41997-42076)
scaffold0009 (416-475)||(42080-42139)
scaffold0009 (502-553)||(42021-42072)
scaffold0009 (523-576)||(42083-42135)
[»] scaffold0318 (1 HSPs)
scaffold0318 (418-502)||(2867-2950)
[»] scaffold0400 (2 HSPs)
scaffold0400 (419-502)||(4487-4570)
scaffold0400 (502-576)||(4496-4569)
[»] scaffold0365 (2 HSPs)
scaffold0365 (419-502)||(5131-5214)
scaffold0365 (502-576)||(5140-5213)
[»] scaffold0129 (3 HSPs)
scaffold0129 (415-501)||(19195-19280)
scaffold0129 (502-576)||(19200-19272)
scaffold0129 (420-492)||(19784-19855)
[»] scaffold0027 (1 HSPs)
scaffold0027 (419-502)||(10887-10970)
[»] scaffold0301 (1 HSPs)
scaffold0301 (420-502)||(7153-7235)
[»] scaffold0240 (1 HSPs)
scaffold0240 (456-515)||(17561-17620)
[»] scaffold0337 (1 HSPs)
scaffold0337 (411-502)||(15855-15943)
[»] scaffold0065 (1 HSPs)
scaffold0065 (411-502)||(2897-2985)
[»] scaffold0002 (1 HSPs)
scaffold0002 (452-502)||(130388-130438)
[»] scaffold0014 (1 HSPs)
scaffold0014 (451-492)||(221195-221236)


Alignment Details
Target: chr1 (Bit Score: 276; Significance: 1e-154; HSPs: 85)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 107 - 418
Target Start/End: Original strand, 50883766 - 50884077
Alignment:
Q  107 gagctctctttgttcgtatattgatcctttctctttgattgttttatcttgagttgatcctttttcagttgatttatgtttgatttagttcaattcgatt 206  Q
    ||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||| |||||||||||||    
T  50883766 gagctctctttatttgtatattgatcctttctctttgattgttttgtcttgagttgatcctttctcggttgatttatgtttgatttggttcaattcgatt 50883865  T
Q  207 catctctttggttgcttatttttctctttgattgattctttatatatgttgattgctttgtttgtttgatcgatcatgtctctattgacttctttatgtt 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  50883866 catctctttggttgcttatttttctctttgattgattctttatatatgttgattgctttgtttgtttgatcgatcatgtctctattggcttctttatgtt 50883965  T
Q  307 tgattgctcatctccgtgttgatttcttatgtttaattgatcatctccatatttattctttagtttgattgattttctctatattgattgttctatttga 406  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50883966 tgattgctcatctccctattgatttcttatgtttaattgatcatctccatatttattctttagtttgattgattttctctatattgattgttctatttga 50884065  T
Q  407 atgtttctctaa 418  Q
    ||||||||||||    
T  50884066 atgtttctctaa 50884077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 418 - 578
Target Start/End: Original strand, 34756427 - 34756586
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    |||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34756427 agagagtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaat 34756526  T
Q  518 aattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacactat 578  Q
    |||| |||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||    
T  34756527 aattgaattccctcaaaacattatattacctc-aaaatatttccccatccaaacacactat 34756586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 416 - 579
Target Start/End: Original strand, 50005077 - 50005239
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 515  Q
    ||||||||||||||||||  ||||| ||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||    
T  50005077 taagagtgtgtttggatgacggaatattttgagagaatgtaatgttttgagcgaattcaacttctttgaggtgaattctattgtttgaatccacctcaaa 50005176  T
Q  516 ataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacactata 579  Q
    |||||| |||||||||||||||||||||| |||| |||||||| | ||||||||||||||||||    
T  50005177 ataattgaattccctcaaaacattacattacctc-aaaatattcctccatccaaacacactata 50005239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 414 - 579
Target Start/End: Original strand, 38277411 - 38277574
Alignment:
Q  414 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctca 513  Q
    |||||||||||||||||||| | |||| ||||||| |||||||||||||||| |||||||||||| ||||||||||||| |||||||| |||||||||||    
T  38277411 tctaagagtgtgtttggatgagagaatattttgagggaatgtaatgttttgaaggaattcaactactttgaggtgaattatattgtttaaatccacctca 38277510  T
Q  514 aaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacactata 579  Q
    |||||||| |||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||    
T  38277511 aaataattgaattccctcaaaacattacattacctc-aaaata-ttccccatccaaacacactata 38277574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 416 - 576
Target Start/End: Original strand, 15034657 - 15034816
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 515  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||    
T  15034657 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaa 15034756  T
Q  516 ataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
     || || ||||||||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  15034757 gtagttgaattccctcaaaacattacattccctc-aaaacattcccccatccaaacacact 15034816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 456 - 579
Target Start/End: Original strand, 40264068 - 40264190
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaat 555  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||    
T  40264068 aatgttttgagggaattcaactactttgagatgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattacctc-aaaat 40264166  T
Q  556 atttccccatccaaacacactata 579  Q
    ||| ||||||||||||||||||||    
T  40264167 attcccccatccaaacacactata 40264190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 418 - 576
Target Start/End: Complemental strand, 4038234 - 4038077
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    |||||||||||||||| |||||| ||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||  ||||||||| |    
T  4038234 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaaagt 4038135  T
Q  518 aattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    | || ||||||||||||||||||||||||||| |||| ||| ||||| |||||||||||    
T  4038134 agttgaattccctcaaaacattacattccctc-aaaacattcccccacccaaacacact 4038077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 413 - 576
Target Start/End: Original strand, 44410306 - 44410468
Alignment:
Q  413 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctc 512  Q
    |||| ||||||| |||||||| | |||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||       
T  44410306 ctcttagagtgtatttggatgggagaatgttttgagggaatgtaatgttttaagcgaattcaactattttgaggtgaattctattgtctgaatccactca 44410405  T
Q  513 aaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||||||| |||||||||||||| ||||||| |||| |||||||| ||| |||||||||||||    
T  44410406 aaaataattgaattccctcaaaactttacattacctc-aaaatattccccaatccaaacacact 44410468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 416 - 574
Target Start/End: Complemental strand, 27804426 - 27804269
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 515  Q
    ||||||||||||||||||  |||||||||||||  |||||||||||| || |||||||||||| ||| || ||||||||||||||||||| |||||||||    
T  27804426 taagagtgtgtttggatggaggaatgttttgaggaaatgtaatgtttagaaggaattcaactactttaagttgaattctattgtttgaattcacctcaaa 27804327  T
Q  516 ataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacaca 574  Q
    ||| || ||||||||||||| ||||||||||||| |||| ||| |||||||||||||||    
T  27804326 atagttgaattccctcaaaatattacattccctc-aaaacattcccccatccaaacaca 27804269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 421 - 539
Target Start/End: Original strand, 45565397 - 45565515
Alignment:
Q  421 gtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataat 520  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||| || |    
T  45565397 gtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactattttaaggtgaattctattgtttaaattcacctcaaagtagt 45565496  T
Q  521 taaattccctcaaaacatt 539  Q
    | |||||||||||||||||    
T  45565497 tgaattccctcaaaacatt 45565515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 456 - 576
Target Start/End: Original strand, 32572960 - 32573079
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaat 555  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||| |||||    
T  32572960 aatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaagaattgaattccctcaaaacattacattacctc-aaaat 32573058  T
Q  556 atttccccatccaaacacact 576  Q
    ||| |||||||||| ||||||    
T  32573059 attcccccatccaatcacact 32573079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 418 - 576
Target Start/End: Complemental strand, 15034818 - 15034661
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |    | |||| ||||| ||| |    
T  15034818 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagt 15034719  T
Q  518 aattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    | || ||||||||||||||||||||||||||| |||| ||| | |||||||||||||||    
T  15034718 agttgaattccctcaaaacattacattccctc-aaaacattcctccatccaaacacact 15034661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 416 - 576
Target Start/End: Original strand, 4038073 - 4038232
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 515  Q
    ||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||| |    | |||| ||||| |||    
T  4038073 taagagtgtgtttgggtgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaa 4038172  T
Q  516 ataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
     || || ||||||||||||||||||| ||||||| |||||||| |||||||||||||||||    
T  4038173 gtagttgaattccctcaaaacattactttccctc-aaaatattcccccatccaaacacact 4038232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 420 - 553
Target Start/End: Original strand, 28745799 - 28745931
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 519  Q
    ||||| |||||||| |||||| ||||||| |||||||||| ||||||||||||||| |||||  |||||||||||||||||||||| ||||||||||||     
T  28745799 agtgtatttggatgggggaatattttgagggaatgtaatggtttgagggaattcaattattta-aggtgaattctattgtttgaattcacctcaaaatag 28745897  T
Q  520 ttaaattccctcaaaacattacattccctcaaaa 553  Q
    || ||||||||||||| |||||||||||| ||||    
T  28745898 ttgaattccctcaaaatattacattcccttaaaa 28745931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 456 - 576
Target Start/End: Complemental strand, 23536188 - 23536069
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaat 555  Q
    ||||||||||||||||||||||| ||| ||||||||| |||||||||||| ||||||||| || || ||||||||||||||||||||||||||| ||||     
T  23536188 aatgttttgagggaattcaactactttaaggtgaattatattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctc-aaaac 23536090  T
Q  556 atttccccatccaaacacact 576  Q
    ||| |||||||||||||||||    
T  23536089 attcccccatccaaacacact 23536069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 456 - 553
Target Start/End: Complemental strand, 37214939 - 37214843
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaa 553  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||    
T  37214939 aatgttttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattctctcaaaacattacattacctcaaaa 37214843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 450 - 539
Target Start/End: Complemental strand, 5474526 - 5474437
Alignment:
Q  450 gaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacatt 539  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  5474526 gaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacttcaaagtaattaaattccctcaaaacatt 5474437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 456 - 576
Target Start/End: Original strand, 27935523 - 27935642
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaat 555  Q
    |||||||||||  |||||||||| ||| |||||||||||||||||||||| || |||||| || || |||| |||||||||||||||||||||| |||||    
T  27935523 aatgttttgagaaaattcaactactttcaggtgaattctattgtttgaattcaactcaaagtagttgaatttcctcaaaacattacattccctc-aaaat 27935621  T
Q  556 atttccccatccaaacacact 576  Q
    ||||| |||||||||||||||    
T  27935622 atttctccatccaaacacact 27935642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 423 - 578
Target Start/End: Complemental strand, 28745950 - 28745797
Alignment:
Q  423 gtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataatta 522  Q
    ||||||||||| | |||| |||| || ||||||||| |||||||||||||||||||||||||||||||||| |    | |||| |||||  ||||||||     
T  28745950 gtgtttggatgagagaatattttaagggaatgtaatattttgagggaattcaactattttgaggtgaattcaaacaatagaattcacct-taaataattg 28745852  T
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacactat 578  Q
    |||||||||||| |||||||||||||| |||||||| ||||||||||| |||||||    
T  28745851 aattccctcaaaccattacattccctc-aaaatattcccccatccaaatacactat 28745797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 416 - 493
Target Start/End: Original strand, 23536065 - 23536142
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 493  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  23536065 taagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattc 23536142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 416 - 505
Target Start/End: Original strand, 31166308 - 31166397
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 505  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||| ||| ||||||||| |||||||||||||||||||    
T  31166308 taagagtgtgtttggatgagggaatgttttgagataatgtaatgttttgatggaatgcaaatattttgagatgaattctattgtttgaat 31166397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 420 - 573
Target Start/End: Complemental strand, 34756584 - 34756432
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 519  Q
    |||||||||||||| || ||| |||||||  ||| ||||||||||||||||||||| |||||||||||| |||| |    | |||| ||||||||| ||     
T  34756584 agtgtgtttggatggggaaatattttgaggtaatataatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtag 34756485  T
Q  520 ttaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacac 573  Q
    || ||||||||||||||||||||||||||| |||| ||| ||||||||||||||    
T  34756484 ttgaattccctcaaaacattacattccctc-aaaacattcccccatccaaacac 34756432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 418 - 493
Target Start/End: Complemental strand, 30190295 - 30190220
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 493  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  30190295 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtaattcaactattttgaggtgaattc 30190220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 422 - 576
Target Start/End: Original strand, 27804269 - 27804422
Alignment:
Q  422 tgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataatt 521  Q
    |||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |    | |||| || || ||| || ||    
T  27804269 tgtgtttggatgggggaatgttttgagggaatgtaatattttgagggaattcaactattttgaggtgaattcaaacaatagaattcaacttaaagtagtt 27804368  T
Q  522 aaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
     |||||| || |||||||||||| |||| |||| ||| | |||||||||||||||    
T  27804369 gaattccttctaaacattacatttcctc-aaaacattcctccatccaaacacact 27804422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 418 - 502
Target Start/End: Complemental strand, 24273293 - 24273209
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| || |||||||||||||| ||||||||    
T  24273293 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttg 24273209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 418 - 505
Target Start/End: Complemental strand, 6470759 - 6470672
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 505  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |  ||||||||| |||| |||||||||||    
T  6470759 agagtgtgtttggatggcggaatgttttgagagaatgtaatgttttgagggaattcaaattctttgaggtggattccattgtttgaat 6470672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 415 - 502
Target Start/End: Original strand, 8224765 - 8224852
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| || || ||||| |||||||| ||||||||    
T  8224765 ctaagagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattgaaatactttgatgtgaattccattgtttg 8224852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 416 - 502
Target Start/End: Complemental strand, 26501154 - 26501068
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| || ||||| |||||||| ||||||||    
T  26501154 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttgatgtgaattccattgtttg 26501068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 576
Target Start/End: Original strand, 30190206 - 30190293
Alignment:
Q  488 gaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||||||||||||||||| |||||||||||| || |||| |||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  30190206 gaattctattgtttgaattcacctcaaaatagttgaattacctcaaaacattacattccctc-aaaacattcccccatccaaacacact 30190293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 420 - 576
Target Start/End: Complemental strand, 38277571 - 38277417
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 519  Q
    |||||||||||||| |||||| |||||||  ||||||||||||||||||||||||| |||||||||||| |||  |    |  ||| ||||||||| ||     
T  38277571 agtgtgtttggatg-gggaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggatttaaacaatataattcacctcaaagtag 38277473  T
Q  520 ttaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    || |||||| |||||||||||||||||||| ||||||||  | ||||||||||||||    
T  38277472 ttgaattccttcaaaacattacattccctc-aaaatattctctcatccaaacacact 38277417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 420 - 576
Target Start/End: Complemental strand, 50005236 - 50005081
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 519  Q
    ||||||||||||||  ||||| |||||||  ||||||||||||||||||||||||| |||||||||||| |||| |    | |||| |||||||||  |     
T  50005236 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 50005137  T
Q  520 ttaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    || ||||| ||||||||||||||||| ||| |||||||| |  ||||||||||||||    
T  50005136 ttgaattcgctcaaaacattacattctctc-aaaatattccgtcatccaaacacact 50005081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 421 - 500
Target Start/End: Complemental strand, 37037019 - 37036940
Alignment:
Q  421 gtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtt 500  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| || ||||| ||||||    
T  37037019 gtgtgtttggatgagggaatgttttgagtgaatgtaatgttttgagggaattcaaatattttgatgtaaattccattgtt 37036940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 415 - 502
Target Start/End: Complemental strand, 28632661 - 28632575
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||| |||||||||||||| |||||||||| ||| ||||||||||||||||| |||||||| || |||||||||||||| ||||||||    
T  28632661 ctaatagtgtgtttggatgagggaatgtttggagggaatgtaatgttttgagagaattcaa-tactttgaggtgaattccattgtttg 28632575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 427 - 502
Target Start/End: Complemental strand, 37448465 - 37448390
Alignment:
Q  427 ttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| || || ||||| |||||||| ||||||||    
T  37448465 ttggatgagggaatgttttgagagaatgtaatgttttgagggaatttaaatactttgatgtgaattccattgtttg 37448390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 420 - 539
Target Start/End: Complemental strand, 40264187 - 40264068
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 519  Q
    |||||||||||||| |||||| |||||||  ||||||||||||||||||||||||| |||||||||||| |||| |    | |||| || |||||| ||     
T  40264187 agtgtgtttggatgggggaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcatctcaaagtag 40264088  T
Q  520 ttaaattccctcaaaacatt 539  Q
    || |||||||||||||||||    
T  40264087 ttgaattccctcaaaacatt 40264068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 456 - 575
Target Start/End: Complemental strand, 45565515 - 45565397
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaat 555  Q
    ||||||||||||||||||||||| |||||||||||||  |    | |||| ||||| |||||| || ||||||||||||||||||||||| ||| ||||     
T  45565515 aatgttttgagggaattcaactactttgaggtgaatttaaacaatagaattcaccttaaaatagttgaattccctcaaaacattacattctctc-aaaac 45565417  T
Q  556 atttccccatccaaacacac 575  Q
    ||| ||||||||||||||||    
T  45565416 attcccccatccaaacacac 45565397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 415 - 497
Target Start/End: Original strand, 29446747 - 29446828
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctatt 497  Q
    ||||||||||||||| | | |||||||||||||  ||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  29446747 ctaagagtgtgtttgaacgggggaatgttttgaaggaatgtaatgttttgagggaattcaacta-tttaaggtgaattctatt 29446828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 419 - 539
Target Start/End: Complemental strand, 32573080 - 32572960
Alignment:
Q  419 gagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaata 518  Q
    ||||||| ||||||| |||||| |||||||  ||||||||||||||||||||||||| | |||||||||| |||| |    | |||| ||||||||| ||    
T  32573080 gagtgtgattggatgggggaatattttgaggtaatgtaatgttttgagggaattcaattcttttgaggtggattcaaacaatagaattcacctcaaagta 32572981  T
Q  519 attaaattccctcaaaacatt 539  Q
     || |||||||||||||||||    
T  32572980 gttgaattccctcaaaacatt 32572960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 418 - 502
Target Start/End: Complemental strand, 47165285 - 47165201
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||||  | |||||||||||  ||||||||||||||||||||||||| || ||| |||||||||| ||||||||    
T  47165285 agagtgtgtttggatggagaaatgttttgaggaaatgtaatgttttgagggaattcaaatactttaaggtgaattccattgtttg 47165201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 415 - 502
Target Start/End: Original strand, 49659214 - 49659300
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||||||  ||||||||| || || |||||||||||||| ||||||||    
T  49659214 ctaagagtgtgtttggatg-gggaatgtattgagggaatgtaatgttacgagggaatttaaatactttgaggtgaattccattgtttg 49659300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 415 - 493
Target Start/End: Complemental strand, 27935647 - 27935569
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 493  Q
    |||||||||||||||||||  | ||| ||||||| |||||||||||||||||| |||||||||| |||||| |||||||    
T  27935647 ctaagagtgtgtttggatggagaaatattttgagggaatgtaatgttttgaggaaattcaactactttgagttgaattc 27935569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 415 - 505
Target Start/End: Complemental strand, 43623054 - 43622964
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 505  Q
    ||||||||||||||||||| |||||||||||||  |||||||||||||||||  |||| || || |||||||||||||  ||| |||||||    
T  43623054 ctaagagtgtgtttggatgggggaatgttttgatggaatgtaatgttttgagaaaatttaaatactttgaggtgaatttcattatttgaat 43622964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 415 - 553
Target Start/End: Complemental strand, 44410473 - 44410335
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 514  Q
    ||||||||||||||||||  |||||| |||||||  ||||||| ||||||||||||||||| ||||||   ||| ||||      | |||| ||||||||    
T  44410473 ctaagagtgtgtttggattggggaatattttgaggtaatgtaaagttttgagggaattcaattatttttgagtggattcagacaatagaattcacctcaa 44410374  T
Q  515 aataattaaattccctcaaaacattacattccctcaaaa 553  Q
    |||| || ||||| || ||||||||||||||||||||||    
T  44410373 aatagttgaattcgcttaaaacattacattccctcaaaa 44410335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 456 - 535
Target Start/End: Complemental strand, 17502301 - 17502222
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaa 535  Q
    ||||||||||||||||||||||| ||| || ||||||||||| ||||||| ||||||||| || || ||||| |||||||    
T  17502301 aatgttttgagggaattcaactactttaagttgaattctattatttgaattcacctcaaagtagttgaattctctcaaaa 17502222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 427 - 502
Target Start/End: Original strand, 44570687 - 44570762
Alignment:
Q  427 ttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||| | |||||||||||| |||||||||||||||| ||||||||| ||  ||||||||||||| ||||||||    
T  44570687 ttggatgggagaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattccattgtttg 44570762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 491 - 553
Target Start/End: Complemental strand, 25889243 - 25889182
Alignment:
Q  491 ttctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaa 553  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||| ||| ||||||||    
T  25889243 ttctattgtttgaatccacctcaaaataattgaattccttcaaaacatta-attacctcaaaa 25889182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 456 - 505
Target Start/End: Original strand, 15245480 - 15245529
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 505  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  15245480 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaat 15245529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 417 - 490
Target Start/End: Complemental strand, 32288007 - 32287934
Alignment:
Q  417 aagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaa 490  Q
    |||||||||||||||||  |||| |||||||| |||||||||||||||||| ||||||| || ||||| |||||    
T  32288007 aagagtgtgtttggatggaggaaagttttgagggaatgtaatgttttgaggaaattcaaatactttgaagtgaa 32287934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 417 - 505
Target Start/End: Original strand, 10166498 - 10166586
Alignment:
Q  417 aagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 505  Q
    ||||||||||||||||| | |||||||||| |  ||||||||||||||| |||| |||| ||| || |||||||||  |||||||||||    
T  10166498 aagagtgtgtttggatgagagaatgttttgtggtaatgtaatgttttgaaggaactcaaatatatttaggtgaatttcattgtttgaat 10166586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 414 - 502
Target Start/End: Original strand, 39887123 - 39887211
Alignment:
Q  414 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||| |||| ||||||||||| || |||| | ||||||||| | ||||||| || ||||| |||||||| ||||||||    
T  39887123 tctaagagtgtgtttagatgagggaatgttttaagggaatatgatgttttgaagaaattcaaatactttgatgtgaattccattgtttg 39887211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 418 - 492
Target Start/End: Complemental strand, 49216412 - 49216337
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgt-aatgttttgagggaattcaactattttgaggtgaatt 492  Q
    ||||||||||||||||||| |||||||||| |||| || ||||||| |||||||||||| || |||||||| ||||    
T  49216412 agagtgtgtttggatgtggaaatgttttgaaagaacgtaaatgtttcgagggaattcaaatactttgaggtaaatt 49216337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 24273218 - 24273291
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| ||||||||| || || |||||||||| |||||||||||||||| |||| ||| |||||||||||||||||    
T  24273218 gaattcacctcaaagtatttgaattccctcataacattacattccctc-aaaacattcccccatccaaacacact 24273291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 436 - 502
Target Start/End: Original strand, 31195474 - 31195540
Alignment:
Q  436 ggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||| ||||||| |||||||||||| ||||| |||| || ||||||||||||||||| ||||||||    
T  31195474 ggaatattttgagggaatgtaatgttctgaggaaatttaaatattttgaggtgaattccattgtttg 31195540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 425 - 502
Target Start/End: Complemental strand, 37447968 - 37447891
Alignment:
Q  425 gtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||  |||||| ||| ||| |||||||||||||||| ||||||||| ||  ||||||||||||| ||||||||    
T  37447968 gtttggataggggaatatttggagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattccattgtttg 37447891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 434 - 502
Target Start/End: Original strand, 946929 - 946997
Alignment:
Q  434 tgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||| ||||||| | |||||||| ||||||| || | |||||||||||| ||||||||    
T  946929 tgggaatgttttgagggaatgtattattttgaggaaattcaaatactatgaggtgaattccattgtttg 946997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 502 - 553
Target Start/End: Complemental strand, 31195531 - 31195480
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaa 553  Q
    |||| |||||||||||| ||||||| ||||| ||||||||||||||||||||    
T  31195531 gaattcacctcaaaatatttaaatttcctcagaacattacattccctcaaaa 31195480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 6470684 - 6470757
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||||||||||||  | || ||||||||||||||||||||||| ||| |||| ||| | |||||||||||||||    
T  6470684 gaatccacctcaaagaatttgaattccctcaaaacattacattctctc-aaaacattccgccatccaaacacact 6470757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 576
Target Start/End: Complemental strand, 8224843 - 8224770
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| ||| ||||| || || ||||||||||||||||||||||||||| |||| ||| || ||||||||||||||    
T  8224843 gaattcacatcaaagtatttcaattccctcaaaacattacattccctc-aaaacattccctcatccaaacacact 8224770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 453
Target Start/End: Original strand, 17502191 - 17502233
Alignment:
Q  411 ttctctaagagtgtgtttggatgtgggaatgttttgagagaat 453  Q
    ||||||||||||||||||||||| |||||| ||||||||||||    
T  17502191 ttctctaagagtgtgtttggatgagggaatattttgagagaat 17502233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 26501077 - 26501150
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| ||| ||||| || || ||||||||||||||||||||||||||| |||| ||| | |||||||||||||||    
T  26501077 gaattcacatcaaagtatttgaattccctcaaaacattacattccctc-aaaacattcctccatccaaacacact 26501150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 47165210 - 47165283
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| ||||| ||| || || |||||||||||||||||||||| |||| |||| ||||| |||||||||||||||    
T  47165210 gaattcaccttaaagtatttgaattccctcaaaacattacatttcctc-aaaacatttctccatccaaacacact 47165283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 45
Target Start/End: Original strand, 50883670 - 50883704
Alignment:
Q  11 agtagagtaaatattttgtattctaaattttgctc 45  Q
    |||||||||||||||||||||||||||||||||||    
T  50883670 agtagagtaaatattttgtattctaaattttgctc 50883704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 507 - 576
Target Start/End: Original strand, 43622981 - 43623049
Alignment:
Q  507 cacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||||||| || |||||||  |||||||||||||||||| || |||| ||| |||||||||||||||||    
T  43622981 cacctcaaagtatttaaattttctcaaaacattacattccatc-aaaacattcccccatccaaacacact 43623049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 418 - 502
Target Start/End: Original strand, 946376 - 946458
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||| |  |||| |||||| ||||||| ||||||||||||||| || || |||| | ||||||||||||||||    
T  946376 agagtgtgtttggatgaga-aatgctttgagggaatgtattgttttgagggaatttaaatactttg-gatgaattctattgtttg 946458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 511 - 575
Target Start/End: Original strand, 37036956 - 37037019
Alignment:
Q  511 tcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacac 575  Q
    |||||||| || ||||||||||||||||||||||| ||| |||| ||| || |||||||||||||    
T  37036956 tcaaaatatttgaattccctcaaaacattacattcactc-aaaacattccctcatccaaacacac 37037019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 441 - 493
Target Start/End: Original strand, 37214842 - 37214894
Alignment:
Q  441 gttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 493  Q
    ||||||||  |||||||||||||||| |||||||| |||||||||||| ||||    
T  37214842 gttttgaggtaatgtaatgttttgagagaattcaattattttgaggtggattc 37214894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 415 - 458
Target Start/End: Original strand, 5474414 - 5474457
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaat 458  Q
    ||||||||||||||||||| |||||||||||||| |||| ||||    
T  5474414 ctaagagtgtgtttggatgggggaatgttttgagggaatttaat 5474457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 418 - 493
Target Start/End: Original strand, 25889158 - 25889232
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 493  Q
    ||||||| || ||||| |||||| |||||||  ||| ||||||||||| ||||||||| |||||||||||| ||||    
T  25889158 agagtgtattgggatgagggaatattttgaggtaat-taatgttttgaaggaattcaattattttgaggtggattc 25889232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 553
Target Start/End: Original strand, 37448399 - 37448450
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaa 553  Q
    |||| ||| ||||| || |||||||||||||||||||||||||| |||||||    
T  37448399 gaattcacatcaaagtatttaaattccctcaaaacattacattctctcaaaa 37448450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 576
Target Start/End: Complemental strand, 49659291 - 49659219
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| ||||||||| || ||||||||||||  |||||||||||||||||| |    |||||||||||||||||||    
T  49659291 gaattcacctcaaagtatttaaattccctcgtaacattacattccctcaata--cattccccatccaaacacact 49659219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 415 - 453
Target Start/End: Original strand, 15245457 - 15245495
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaat 453  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  15245457 ctaagagtgtgtttggatgggggaatgttttgagggaat 15245495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 456 - 502
Target Start/End: Original strand, 44571239 - 44571285
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||||| || ||||| |||||||| ||||||||    
T  44571239 aatgttttgagggaattcaaatactttgaagtgaattccattgtttg 44571285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 456 - 502
Target Start/End: Original strand, 48953607 - 48953652
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  48953607 aatgttttgaaggaattcaaatattt-gaggtgaattctattgtttg 48953652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 456 - 502
Target Start/End: Complemental strand, 52135660 - 52135614
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||||| |||||| |||| |||| |||||||||    
T  52135660 aatgttttgagggaattcaaatatttttaggtaaattttattgtttg 52135614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 502
Target Start/End: Complemental strand, 15468009 - 15467952
Alignment:
Q  445 tgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||| ||||||| |||||| ||||||||||| || |||| ||||||||| ||||||||    
T  15468009 tgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttg 15467952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 32128068 - 32128113
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgttt 501  Q
    |||||||||||||||||||| || |||| ||||||||| |||||||    
T  32128068 aatgttttgagggaattcaaatactttgtggtgaattccattgttt 32128113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 523 - 576
Target Start/End: Original strand, 32287952 - 32288004
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| |||||||||||||||||||||||||| | || | |||||||||||||||    
T  32287952 aatttcctcaaaacattacattccctcaaaact-ttcctccatccaaacacact 32288004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 502
Target Start/End: Original strand, 51847855 - 51847935
Alignment:
Q  421 gtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||  |||||||||||||  ||||||||||||| | | ||||||| || ||| |||||||||| || |||||    
T  51847855 gtgtgtttggatggaggaatgttttgaggtaatgtaatgttttaaagaaattcaaatacttt-aggtgaattccatcgtttg 51847935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 520 - 553
Target Start/End: Original strand, 52280969 - 52281002
Alignment:
Q  520 ttaaattccctcaaaacattacattccctcaaaa 553  Q
    |||||||||||||||||||||| |||||||||||    
T  52280969 ttaaattccctcaaaacattactttccctcaaaa 52281002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 520 - 552
Target Start/End: Complemental strand, 946432 - 946400
Alignment:
Q  520 ttaaattccctcaaaacattacattccctcaaa 552  Q
    |||||||||||||||||| ||||||||||||||    
T  946432 ttaaattccctcaaaacaatacattccctcaaa 946400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 502 - 578
Target Start/End: Original strand, 28632584 - 28632658
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacactat 578  Q
    |||| ||||||||| || || ||||| |||||||||||||||||||||  ||| ||| || ||||||||||||||||    
T  28632584 gaattcacctcaaagta-ttgaattctctcaaaacattacattccctc-caaacattccctcatccaaacacactat 28632658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 502
Target Start/End: Original strand, 32647301 - 32647385
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||| |||||| |  ||||||||||||   |||||| |||||||||| ||||||| || |||| ||||||| | ||||||||    
T  32647301 agagtgtatttggacggaggaatgttttgaagaaatgtattgttttgaggaaattcaaatactttggggtgaataccattgtttg 32647385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 413 - 453
Target Start/End: Complemental strand, 37447419 - 37447379
Alignment:
Q  413 ctctaagagtgtgtttggatgtgggaatgttttgagagaat 453  Q
    ||||||||| ||||||||||  |||||||||||||||||||    
T  37447419 ctctaagagcgtgtttggataggggaatgttttgagagaat 37447379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 415 - 447
Target Start/End: Complemental strand, 41823218 - 41823186
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttga 447  Q
    ||||||||||||||||||| |||||||||||||    
T  41823218 ctaagagtgtgtttggatgggggaatgttttga 41823186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 48953580 - 48953616
Alignment:
Q  411 ttctctaagagtgtgtttggatgtgggaatgttttga 447  Q
    |||||| |||||||||||||||| |||||||||||||    
T  48953580 ttctcttagagtgtgtttggatgggggaatgttttga 48953616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 142; Significance: 3e-74; HSPs: 73)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 413 - 578
Target Start/End: Complemental strand, 41461679 - 41461515
Alignment:
Q  413 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctc 512  Q
    |||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41461679 ctcttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctc 41461580  T
Q  513 aaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacactat 578  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  41461579 aaaataattaaattccctcaaaacattacattacctc-aaaatatttccccatccaaacacactat 41461515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 416 - 535
Target Start/End: Original strand, 27033488 - 27033607
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 515  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27033488 taagagtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaa 27033587  T
Q  516 ataattaaattccctcaaaa 535  Q
    | |||| |||||||||||||    
T  27033588 agaattgaattccctcaaaa 27033607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 418 - 576
Target Start/End: Complemental strand, 784952 - 784795
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    |||||||||||||||| |||||| ||||||  ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| || |||||| |    
T  784952 agagtgtgtttggatgggggaatattttgatggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagt 784853  T
Q  518 aattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    | ||||||||| |||||||||||||||||||| |||| ||||  |||||||||||||||    
T  784852 agttaaattccttcaaaacattacattccctc-aaaacatttttccatccaaacacact 784795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 418 - 576
Target Start/End: Complemental strand, 14365858 - 14365702
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattg-tttgaatccacctcaaaa 516  Q
    ||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||| |||  |||||||||||||| ||||||| |||||||||     
T  14365858 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactacttt--ggtgaattctattgttttgaattcacctcaaag 14365761  T
Q  517 taattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    || || ||||||||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  14365760 tagttgaattccctcaaaacattacattccctc-aaaacattcccccatccaaacacact 14365702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 411 - 576
Target Start/End: Original strand, 41461508 - 41461672
Alignment:
Q  411 ttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacc 510  Q
    |||||||| |||||||||||||| || ||| |||||||  |||||||||||||||||||||| || |||||||||||| |||| |    | |||| ||||    
T  41461508 ttctctaatagtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaatttaattattttgaggtggattcaaacaatagaattcacc 41461607  T
Q  511 tcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||||||| || ||||||||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  41461608 tcaaaatagttgaattccctcaaaacattacattccctc-aaaacattcccccatccaaacacact 41461672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 456 - 576
Target Start/End: Complemental strand, 14537320 - 14537201
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaat 555  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||| || || |||| |||||||||||||||||||||| ||||     
T  14537320 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattacctcaaaacattacattccctc-aaaac 14537222  T
Q  556 atttccccatccaaacacact 576  Q
    ||| |||||||||||||||||    
T  14537221 attcccccatccaaacacact 14537201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 426 - 553
Target Start/End: Complemental strand, 11716550 - 11716432
Alignment:
Q  426 tttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaat 525  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||         ||||||||||||||||||||| ||||||||| || || |||    
T  11716550 tttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa---------ggtgaattctattgtttgaattcacctcaaagtagttgaat 11716460  T
Q  526 tccctcaaaacattacattccctcaaaa 553  Q
    ||||||||||||||||||||||||||||    
T  11716459 tccctcaaaacattacattccctcaaaa 11716432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 416 - 576
Target Start/End: Original strand, 14365698 - 14365856
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc-tattgtttgaatccacctcaa 514  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||  |    | |||| |||  |||    
T  14365698 taagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcac--caa 14365795  T
Q  515 aataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    | || || ||||||||||||||||||||||||||| |||| ||| | |||||||||||||||    
T  14365796 agtagttgaattccctcaaaacattacattccctc-aaaacattcctccatccaaacacact 14365856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 416 - 495
Target Start/End: Original strand, 17180295 - 17180374
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattcta 495  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  17180295 taagagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactattttgagatgaattcta 17180374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 415 - 576
Target Start/End: Original strand, 784790 - 784950
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 514  Q
    |||||||||||||||||||    ||||||||||| |||||||||||||||| |||||| ||||| |||||| ||||||| |    | |||| ||||| ||    
T  784790 ctaagagtgtgtttggatggaaaaatgttttgagggaatgtaatgttttgaaggaatttaactactttgagttgaattcaaacaatagaattcaccttaa 784889  T
Q  515 aataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    | || || |||||||||||||||||||||||| || |||||||| |||||||||||||||||    
T  784890 agtagttgaattccctcaaaacattacattccatc-aaaatattcccccatccaaacacact 784950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 415 - 539
Target Start/End: Original strand, 11684596 - 11684711
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 514  Q
    |||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||         |||||||||||||||||||||| ||||||||    
T  11684596 ctaagaatgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattca---------aggtgaattctattgtttgaattcacctcaa 11684686  T
Q  515 aataattaaattccctcaaaacatt 539  Q
    | || || |||||||||||||||||    
T  11684687 agtagttgaattccctcaaaacatt 11684711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 417 - 539
Target Start/End: Original strand, 14537198 - 14537320
Alignment:
Q  417 aagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaa 516  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||| |    | |||| ||||| |||     
T  14537198 aagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtaattcaactactttgaggtgaattcaaacaatagaattcaccttaaag 14537297  T
Q  517 taattaaattccctcaaaacatt 539  Q
    || || |||||||||||||||||    
T  14537298 tagttgaattccctcaaaacatt 14537320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 415 - 502
Target Start/End: Original strand, 10480116 - 10480203
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  |||||||||||| || |||||||||||||| ||||||||    
T  10480116 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttacgagggaattcaaatactttgaggtgaattccattgtttg 10480203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 411 - 502
Target Start/End: Original strand, 13017772 - 13017863
Alignment:
Q  411 ttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||| ||||||||||||||||||| ||||||||||| ||||||||| |||| ||||||||||| || |||||||||||||| ||||||||    
T  13017772 ttctcttagagtgtgtttggatgtggaaatgttttgagggaatgtaatattttaagggaattcaaatactttgaggtgaattccattgtttg 13017863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 415 - 493
Target Start/End: Original strand, 17905651 - 17905729
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 493  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||    
T  17905651 ctaagagtgtgttaggatgagggaatgttttgagagaatgtaatgttttaaaggaattcaaatattttgaggtgaattc 17905729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 418 - 539
Target Start/End: Original strand, 10244177 - 10244298
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    |||||||||||||||| | |||| || |||| ||| ||||||||||||||||||||||||| ||  ||||||||| |||||||||||  ||||||||| |    
T  10244177 agagtgtgtttggatgggagaatattctgagggaaagtaatgttttgagggaattcaactacttcaaggtgaattttattgtttgaactcacctcaaagt 10244276  T
Q  518 aattaaattccctcaaaacatt 539  Q
    | || |||||||| ||||||||    
T  10244277 agttgaattcccttaaaacatt 10244298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 414 - 502
Target Start/End: Complemental strand, 33189334 - 33189246
Alignment:
Q  414 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||| || |||| ||||||||| ||||||||    
T  33189334 tctaagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttg 33189246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 492 - 579
Target Start/End: Original strand, 44256181 - 44256266
Alignment:
Q  492 tctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacactata 579  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||||    
T  44256181 tctattgtttgaattcacctcaaaataatcgaattccctcaaaacattacattacctc--aaatattcccccatccaaacacactata 44256266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 411 - 502
Target Start/End: Complemental strand, 1583889 - 1583798
Alignment:
Q  411 ttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||| |||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||| || |||| ||||||||| ||||||||    
T  1583889 ttctcttagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttg 1583798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 418 - 493
Target Start/End: Original strand, 11716408 - 11716483
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 493  Q
    ||||||||||||||||   |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  11716408 agagtgtgtttggatggaagaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattc 11716483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 416 - 502
Target Start/End: Original strand, 769034 - 769120
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||| || |||| ||||||||| ||||||||    
T  769034 taagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttg 769120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 420 - 502
Target Start/End: Complemental strand, 11532324 - 11532242
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||| |||||| ||| ||| |||||||||||||||||||||||||| || |||||||||||||| ||||||||    
T  11532324 agtgtgtttggatgggggaatatttggagggaatgtaatgttttgagggaattcaaatactttgaggtgaattccattgtttg 11532242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 420 - 502
Target Start/End: Original strand, 11793897 - 11793979
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||| |||||| ||||||| |||||||||||| ||||||||||||| || |||||||||||||| ||||||||    
T  11793897 agtgtgtttggatgggggaatattttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttg 11793979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 456 - 539
Target Start/End: Complemental strand, 11824801 - 11824718
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacatt 539  Q
    ||||||||||||||||||||||| ||| ||||||||| |||||||||||| || |||||| || || |||||||||||||||||    
T  11824801 aatgttttgagggaattcaactactttaaggtgaattatattgtttgaattcatctcaaagtagttgaattccctcaaaacatt 11824718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 416 - 502
Target Start/End: Original strand, 11141303 - 11141389
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||| || |||| ||||||||  ||||||||    
T  11141303 taagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattacattgtttg 11141389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 410 - 502
Target Start/End: Original strand, 3092274 - 3092366
Alignment:
Q  410 tttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||| ||||||||  ||||||||||||| ||||||| |||||||||| ||||||| || |||| ||| ||||| ||||||||    
T  3092274 tttctctaagagtgtatttggatggaggaatgttttgagggaatgtattgttttgaggaaattcaaatactttggggtaaattccattgtttg 3092366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 456 - 539
Target Start/End: Original strand, 3345783 - 3345867
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaata-attaaattccctcaaaacatt 539  Q
    ||||||||||||||||||||||| ||| |||| ||||||||||||||||| ||||||||| ||  || |||||||||||||||||    
T  3345783 aatgttttgagggaattcaactactttaaggtaaattctattgtttgaattcacctcaaagtacgttgaattccctcaaaacatt 3345867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 418 - 502
Target Start/End: Complemental strand, 45094544 - 45094460
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||| ||| |||||||||||||| |||| |||||||||||||||||| ||||| ||| | |||||||| ||||||||    
T  45094544 agagtgtgtttgaatgagggaatgttttgagggaatataatgttttgagggaatttaactactttaaagtgaattccattgtttg 45094460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 416 - 502
Target Start/End: Complemental strand, 7228087 - 7228001
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||| |||||| || ||  ||||||| ||||  ||||||||    
T  7228087 taagagtgtgtttggatggggaaatgttttgagagaatgtaatgttttgaaggaatttaaataccttgaggtaaatttcattgtttg 7228001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 416 - 502
Target Start/End: Original strand, 39630223 - 39630308
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||| |||  | ||||||||||| ||||||| |||||||||||||||||| || ||||||| |||||||||||||||    
T  39630223 taagagtgtgtttgaatggagaaatgttttgagggaatgtattgttttgagggaattcaaata-tttgaggggaattctattgtttg 39630308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 502 - 579
Target Start/End: Complemental strand, 11793970 - 11793894
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacactata 579  Q
    |||| ||||||||| || || |||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||    
T  11793970 gaattcacctcaaagtatttgaattccctcataacattacattccctc-aaaatattcccccatccaaacacactata 11793894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 460 - 576
Target Start/End: Complemental strand, 27033607 - 27033492
Alignment:
Q  460 ttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatattt 559  Q
    |||||||||||||||| | |||||||||| |||| |    | |||| ||||||||| || || ||||||||||||||||||||||| ||| |||| |||     
T  27033607 ttttgagggaattcaattcttttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattctctc-aaaacattc 27033509  T
Q  560 ccccatccaaacacact 576  Q
    |||||||||||||||||    
T  27033508 ccccatccaaacacact 27033492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 421 - 501
Target Start/End: Original strand, 28740599 - 28740679
Alignment:
Q  421 gtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgttt 501  Q
    ||||||||| ||| || ||||||||||| |||||||||||||||||||||||||| || ||||| || ||||| |||||||    
T  28740599 gtgtgtttgaatggggaaatgttttgagggaatgtaatgttttgagggaattcaaatactttgatgtaaattccattgttt 28740679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 426 - 502
Target Start/End: Original strand, 30698289 - 30698365
Alignment:
Q  426 tttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||| |||||||||||||| |||||||||||||||| ||||||||| ||  ||||||||||||  ||||||||    
T  30698289 tttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaatttcattgtttg 30698365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 418 - 502
Target Start/End: Complemental strand, 35047752 - 35047668
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||| ||||||||||||||  |||||| |||||| ||||||||||| || |||| ||||||||| | ||||||    
T  35047752 agagtgtgtttggatgggggaatgttttgaggaaatgtattgttttaagggaattcaaatactttggggtgaattccaatgtttg 35047668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 451 - 553
Target Start/End: Complemental strand, 14954393 - 14954290
Alignment:
Q  451 aatgtaatgttttgagggaattcaactattttgaggtgaattctattg-tttgaatccacctcaaaataattaaattccctcaaaacattacattccctc 549  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||  || | ||| || || ||||| || |||| ||||||||| |||    
T  14954393 aatgtaatgttttgagggaattcaactactttaaggtgaattctattgttttgaatttactttaaagtagttgaattctcttaaaagattacattcactc 14954294  T
Q  550 aaaa 553  Q
    ||||    
T  14954293 aaaa 14954290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 11532251 - 11532324
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| ||||||||| || || |||||||||||||||||||||||||||  ||||||| |||||||||||||||||    
T  11532251 gaattcacctcaaagtatttgaattccctcaaaacattacattccctc-caaatattcccccatccaaacacact 11532324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 419 - 500
Target Start/End: Complemental strand, 30751418 - 30751338
Alignment:
Q  419 gagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtt 500  Q
    ||||||||||||||| | ||||||||||||| |||||||||||||||| ||||| || || ||| || ||||||||||||||    
T  30751418 gagtgtgtttggatgagagaatgttttgagataatgtaatgttttgagtgaatttaaata-tttaagatgaattctattgtt 30751338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 424 - 505
Target Start/End: Original strand, 40026070 - 40026151
Alignment:
Q  424 tgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 505  Q
    |||||| ||| |||||| |||||||  ||| ||||||||||||| |||| || || ||||||||||||||||||||||||||    
T  40026070 tgtttgaatgggggaatattttgaggtaatataatgttttgaggaaatttaaatactttgaggtgaattctattgtttgaat 40026151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 420 - 493
Target Start/End: Complemental strand, 44256263 - 44256191
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 493  Q
    |||||||||||||| |||||| ||| |||  ||||||||||||||||||||||| | |||||||||||||||||    
T  44256263 agtgtgtttggatgggggaatattt-gaggtaatgtaatgttttgagggaattcgattattttgaggtgaattc 44256191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 454 - 501
Target Start/End: Original strand, 11595355 - 11595402
Alignment:
Q  454 gtaatgttttgagggaattcaactattttgaggtgaattctattgttt 501  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||    
T  11595355 gtaatgttttgagggaattcaaatattttgaggtgaattccattgttt 11595402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 510 - 576
Target Start/End: Complemental strand, 17180364 - 17180299
Alignment:
Q  510 ctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||||||| || ||||||||||||||||||||||||||| |||| ||| || ||||||||||||||    
T  17180364 ctcaaaatagttgaattccctcaaaacattacattccctc-aaaacattccctcatccaaacacact 17180299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 456 - 505
Target Start/End: Original strand, 21504488 - 21504537
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 505  Q
    |||||||||||||||||||| ||||||||| ||||||| |||||||||||    
T  21504488 aatgttttgagggaattcaaatattttgagatgaattccattgtttgaat 21504537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 445 - 502
Target Start/End: Complemental strand, 32839694 - 32839637
Alignment:
Q  445 tgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||| |||||||||||||||||||||||||| || ||||| |||||||| ||||||||    
T  32839694 tgagggaatgtaatgttttgagggaattcaaatactttgacgtgaattccattgtttg 32839637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 520 - 576
Target Start/End: Original strand, 7228028 - 7228083
Alignment:
Q  520 ttaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||||||| |||||||||||||||| ||| |||| |||||||||||||||||||||    
T  7228028 ttaaattccttcaaaacattacattctctc-aaaacatttccccatccaaacacact 7228083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 523 - 575
Target Start/End: Complemental strand, 28740650 - 28740599
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacac 575  Q
    ||||||||||||||||||||||||||| |||| |||||||||| |||||||||    
T  28740650 aattccctcaaaacattacattccctc-aaaacatttccccattcaaacacac 28740599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 740724 - 740791
Alignment:
Q  438 aatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 505  Q
    |||||||||||| |||||||||||||| | |||||||  |  ||||||||||||| ||||||||||||    
T  740724 aatgttttgagataatgtaatgttttgtgagaattcatatcatttgaggtgaattttattgtttgaat 740791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 454 - 501
Target Start/End: Original strand, 11607257 - 11607304
Alignment:
Q  454 gtaatgttttgagggaattcaactattttgaggtgaattctattgttt 501  Q
    |||||||||||||||||||||| || |||||||||||||| |||||||    
T  11607257 gtaatgttttgagggaattcaaatactttgaggtgaattccattgttt 11607304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 523 - 574
Target Start/End: Complemental strand, 11684653 - 11684603
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacaca 574  Q
    ||||||||||||||||||||||||||| |||| ||| |||||||||||||||    
T  11684653 aattccctcaaaacattacattccctc-aaaacattcccccatccaaacaca 11684603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 502
Target Start/End: Complemental strand, 7167714 - 7167656
Alignment:
Q  444 ttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||| |||||||||||||||| ||||||||| || |||||||||||||  ||||||||    
T  7167714 ttgagggaatgtaatgttttgaaggaattcaaatactttgaggtgaatttcattgtttg 7167656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 456 - 502
Target Start/End: Complemental strand, 8736476 - 8736430
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||||| || |||||||||||||| ||||||||    
T  8736476 aatgttttgagggaattcaaatactttgaggtgaattccattgtttg 8736430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 576
Target Start/End: Complemental strand, 10480194 - 10480121
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| ||||||||| || || |||||||||  |||||||||||||||| |||| ||| |||||||||||||||||    
T  10480194 gaattcacctcaaagtatttgaattccctcgtaacattacattccctc-aaaacattcccccatccaaacacact 10480121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 576
Target Start/End: Complemental strand, 13017854 - 13017781
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| ||||||||| || || |||||||| |||| ||||||||||||| |||| |||||| ||||||||||||||    
T  13017854 gaattcacctcaaagtatttgaattcccttaaaatattacattccctc-aaaacatttccacatccaaacacact 13017781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 478
Target Start/End: Original strand, 14954264 - 14954326
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaacta 478  Q
    |||||||||||||||||   ||||||||||||| ||||||||| |||| || |||||||||||    
T  14954264 taagagtgtgtttggatagaggaatgttttgagtgaatgtaatcttttaagagaattcaacta 14954326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 493
Target Start/End: Complemental strand, 11684711 - 11684674
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattc 493  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  11684711 aatgttttgagggaattcaactactttgaggtgaattc 11684674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 576
Target Start/End: Complemental strand, 10244298 - 10244179
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaat 555  Q
    |||||||| |||||||||||||| |||||||||| ||| |    |  ||| |||||  || || || ||||||||||||||||||| ||||||| | |||    
T  10244298 aatgttttaagggaattcaactactttgaggtgagttcaaacaataaaattcaccttgaagtagttgaattccctcaaaacattactttccctc-agaat 10244200  T
Q  556 atttccccatccaaacacact 576  Q
    |||  ||||||||||||||||    
T  10244199 attctcccatccaaacacact 10244179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 414 - 502
Target Start/End: Original strand, 11606709 - 11606797
Alignment:
Q  414 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||| | |||| ||||| |||||||||||||  ||||||||| |||| | ||||| ||| || |||||||||||||  ||||||||    
T  11606709 tctaagaatttgttaggatgagggaatgttttgaaggaatgtaatattttcaaggaatacaaatactttgaggtgaatttaattgtttg 11606797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 570
Target Start/End: Original strand, 11716504 - 11716550
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaa 570  Q
    ||||||||||||||||||||||||||| |||| ||| |||||||||||    
T  11716504 aattccctcaaaacattacattccctc-aaaacattcccccatccaaa 11716550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 502 - 576
Target Start/End: Complemental strand, 769111 - 769038
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| |||| |||| || || |||||||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  769111 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctc-aaaacattcccccatccaaacacact 769038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 1583807 - 1583880
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| |||| |||| || || |||||||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  1583807 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctc-aaaacattcccccatccaaacacact 1583880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 418 - 488
Target Start/End: Original strand, 8735844 - 8735914
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtg 488  Q
    |||||||||||||||| |   |||||||||| |||| |||||||  |||||||||||| || |||||||||    
T  8735844 agagtgtgtttggatgggaacatgttttgagggaatataatgttacgagggaattcaaatactttgaggtg 8735914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 456 - 502
Target Start/End: Original strand, 20935744 - 20935790
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||||| || ||||| |||||||| ||||||||    
T  20935744 aatgttttgagggaattcaaatactttgatgtgaattccattgtttg 20935790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 33189255 - 33189328
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| |||| |||| || || |||||||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  33189255 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctc-aaaacattcccccatccaaacacact 33189328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 39630288 - 39630227
Alignment:
Q  514 aaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||| || ||||||||||||||| ||||||||||| |||| ||||| |||| ||||||||||    
T  39630288 aaatatttgaattccctcaaaacaatacattccctc-aaaacatttctccattcaaacacact 39630227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 502 - 572
Target Start/End: Complemental strand, 40026139 - 40026070
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaaca 572  Q
    |||| ||||||||| || ||||||| ||||||||||||| ||| |||| |||||||| |||||| ||||||    
T  40026139 gaattcacctcaaagtatttaaatttcctcaaaacattatattacctc-aaaatattcccccattcaaaca 40026070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 523 - 576
Target Start/End: Complemental strand, 11141359 - 11141307
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||||||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  11141359 aattcccttaaaacaatacattccctc-aaaacattcccccatccaaacacact 11141307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 493
Target Start/End: Original strand, 11824718 - 11824755
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattc 493  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  11824718 aatgttttgagggaattcaactactttgagatgaattc 11824755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 464
Target Start/End: Complemental strand, 39478017 - 39477976
Alignment:
Q  423 gtgtttggatgtgggaatgttttgagagaatgtaatgttttg 464  Q
    ||||||||||||| ||||||||||||  ||||||||||||||    
T  39478017 gtgtttggatgtgagaatgttttgaggtaatgtaatgttttg 39477976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 520 - 553
Target Start/End: Original strand, 45094487 - 45094520
Alignment:
Q  520 ttaaattccctcaaaacattacattccctcaaaa 553  Q
    ||||||||||||||||||||| ||||||||||||    
T  45094487 ttaaattccctcaaaacattatattccctcaaaa 45094520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 414 - 502
Target Start/End: Complemental strand, 2274865 - 2274777
Alignment:
Q  414 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||| ||||||||||||||  ||||||||| |||  |||  ||| |||| ||||||||||| |||||| || | ||||| ||||||||    
T  2274865 tctaatagtgtgtttggatgaaggaatgtttcgaggtaatacaatattttaagggaattcaaatatttttagatcaattccattgtttg 2274777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 507 - 551
Target Start/End: Original strand, 7167670 - 7167714
Alignment:
Q  507 cacctcaaaataattaaattccctcaaaacattacattccctcaa 551  Q
    ||||||||| || || |||||| ||||||||||||||||||||||    
T  7167670 cacctcaaagtatttgaattccttcaaaacattacattccctcaa 7167714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 502 - 550
Target Start/End: Original strand, 32839646 - 32839694
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctca 550  Q
    |||| ||| ||||| || || ||||||||||||||||||||||||||||    
T  32839646 gaattcacgtcaaagtatttgaattccctcaaaacattacattccctca 32839694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 458 - 502
Target Start/End: Original strand, 44255674 - 44255718
Alignment:
Q  458 tgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||| |||||||| || |||| ||||||||||||||||||    
T  44255674 tgttttgagagaattcaaatactttggggtgaattctattgtttg 44255718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 125; Significance: 5e-64; HSPs: 73)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 418 - 578
Target Start/End: Original strand, 3853616 - 3853775
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3853616 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgaggtgaattctattgtttgaatccacctcaaaat 3853715  T
Q  518 aattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacactat 578  Q
    |||| ||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||    
T  3853716 aattgaattccctccaaacattacattacctc-aaaatatttccccatccaaacacactat 3853775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 418 - 578
Target Start/End: Original strand, 3858074 - 3858233
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3858074 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgaggtgaattctattgtttgaatccacctcaaaat 3858173  T
Q  518 aattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacactat 578  Q
    |||| ||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||    
T  3858174 aattgaattccctccaaacattacattacctc-aaaatatttccccatccaaacacactat 3858233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 435 - 579
Target Start/End: Complemental strand, 13404969 - 13404826
Alignment:
Q  435 gggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaa 534  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||| ||||||||||||    
T  13404969 gggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagatgaattttattgtttgaatccacctcaaaataattgaattccctcaaa 13404870  T
Q  535 acattacattccctcaaaaatatttccccatccaaacacactata 579  Q
    |||||||||| |||| |||||||||||||||||||||||||||||    
T  13404869 acattacattacctc-aaaatatttccccatccaaacacactata 13404826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 418 - 576
Target Start/End: Complemental strand, 17111028 - 17110871
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    ||||||||||||||||  | ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| || |||||| |    
T  17111028 agagtgtgtttggatggagaaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagt 17110929  T
Q  518 aattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    | || ||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  17110928 agttgaattccctcaaaacattacattccctc-aaaacatttccccatccaaacacact 17110871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 415 - 576
Target Start/End: Original strand, 17110866 - 17111026
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 514  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||| |    | |||| ||||| ||    
T  17110866 ctaagagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaa 17110965  T
Q  515 aataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    | || || ||||||||||||||||||||||||||| |||| ||||| |||||||||||||||    
T  17110966 agtagttgaattccctcaaaacattacattccctc-aaaacatttctccatccaaacacact 17111026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 418 - 576
Target Start/End: Original strand, 33902667 - 33902823
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattg-tttgaatccacctcaaaa 516  Q
    ||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||| |||  |||||||||||||| ||||||| |||||||||     
T  33902667 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactacttt--ggtgaattctattgttttgaattcacctcaaag 33902764  T
Q  517 ta-attaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||  || |||||||||||||||  ||||||||||  ||| ||| |||||||| ||||||||    
T  33902765 tagtttgaattccctcaaaacaaaacattccctc--aaacattcccccatcccaacacact 33902823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 418 - 539
Target Start/End: Complemental strand, 14800119 - 14799999
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    |||||||||||||||| |||||| ||||||| ||| ||||||||||||||||||||||||| ||  ||||||||| |||||||||||  |||||| ||||    
T  14800119 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaactacttcaaggtgaattttattgtttgaactcacctc-aaat 14800021  T
Q  518 aattaaattccctcaaaacatt 539  Q
    | || |||||||||||||||||    
T  14800020 agtttaattccctcaaaacatt 14799999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 420 - 576
Target Start/End: Complemental strand, 3853773 - 3853618
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 519  Q
    |||||||||||||| || ||| |||||||  |||||||||||| |||||||||||| |||||||||||| |||| |    | |||| ||||||||| ||     
T  3853773 agtgtgtttggatggggaaatattttgaggtaatgtaatgtttggagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtag 3853674  T
Q  520 ttaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    || |||| |||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  3853673 ttgaatttcctcaaaacattacattccctc-aaaacattcccccatccaaacacact 3853618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 420 - 576
Target Start/End: Complemental strand, 3858231 - 3858076
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 519  Q
    |||||||||||||| || ||| |||||||  |||||||||||| |||||||||||| |||||||||||| |||| |    | |||| ||||||||| ||     
T  3858231 agtgtgtttggatggggaaatattttgaggtaatgtaatgtttggagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtag 3858132  T
Q  520 ttaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    || |||| |||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  3858131 ttgaatttcctcaaaacattacattccctc-aaaacattcccccatccaaacacact 3858076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 415 - 553
Target Start/End: Original strand, 40046801 - 40046925
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 514  Q
    |||||||||||||||||||   |||||||||||| ||||||||||||||||||||||||||||| ||||||              |||||||||||||||    
T  40046801 ctaagagtgtgtttggatggatgaatgttttgagggaatgtaatgttttgagggaattcaactactttgag--------------ttgaatccacctcaa 40046886  T
Q  515 aataattaaattccctcaaaacattacattccctcaaaa 553  Q
    ||||||| |||||||||||||||||||||| ||||||||    
T  40046887 aataattgaattccctcaaaacattacattacctcaaaa 40046925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 420 - 516
Target Start/End: Complemental strand, 4156324 - 4156228
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaa 516  Q
    |||||||||||||| | |||| ||||||| ||||||||||||||||||||||||||||| ||| || ||||||||||||||||||| || |||||||    
T  4156324 agtgtgtttggatgggagaatattttgagggaatgtaatgttttgagggaattcaactactttaagatgaattctattgtttgaattcaactcaaaa 4156228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 497 - 576
Target Start/End: Original strand, 37268086 - 37268164
Alignment:
Q  497 tgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||| |||||||||||||    
T  37268086 tgtttgaatccacctcaaaataattaaattccctcaaaacattacattacctc-aaaatattcccctatccaaacacact 37268164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 456 - 535
Target Start/End: Original strand, 42739969 - 42740048
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaa 535  Q
    ||||||||||||||||||||||| |||||| |||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  42739969 aatgttttgagggaattcaactactttgagatgaattttattgttagaatccacctcaaaataattgaattccctcaaaa 42740048  T

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Target: chr8; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 456 - 574
Target Start/End: Complemental strand, 30435365 - 30435250
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaat 555  Q
    ||||||||||||||||||||||||||  |||| ||||||||||||| ||| || |||||| || |||||||||||| ||||||||||||||||| ||||     
T  30435365 aatgttttgagggaattcaactattta-aggtaaattctattgtttaaattcaactcaaa-tagttaaattccctccaaacattacattccctc-aaaac 30435269  T
Q  556 atttccccatccaaacaca 574  Q
    ||||| |||||||||||||    
T  30435268 atttctccatccaaacaca 30435250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 420 - 553
Target Start/End: Original strand, 13404829 - 13404962
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 519  Q
    |||||||||||||| || ||| |||||||  ||||||||||||||||||||||||| |||||||||||| |||| |    |  ||| || |||||| ||     
T  13404829 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaataaaattcatctcaaagtag 13404928  T
Q  520 ttaaattccctcaaaacattacattccctcaaaa 553  Q
    || |||||||||||||||||||||||||||||||    
T  13404929 ttgaattccctcaaaacattacattccctcaaaa 13404962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 416 - 493
Target Start/End: Complemental strand, 42711441 - 42711364
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 493  Q
    |||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||    
T  42711441 taagagtgtgtttggattggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagttgaattc 42711364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 418 - 502
Target Start/End: Original strand, 24044960 - 24045044
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||| ||  ||||||||||||| ||||||||    
T  24044960 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattccattgtttg 24045044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 415 - 502
Target Start/End: Complemental strand, 33377383 - 33377296
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||||||| |||||||||||||| |||| || |||||||||||||||||| || |||| ||||||||| ||||||||    
T  33377383 ctaagagtgtgtttggatgggggaatgttttgagggaatatattgttttgagggaattcaaatactttggggtgaattccattgtttg 33377296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 416 - 502
Target Start/End: Original strand, 23011732 - 23011818
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||| | | |||||||||||| |||||||||||| ||||||||||||| || |||||||||||||| ||||||||    
T  23011732 taagagtgtgtttggacgggagaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttg 23011818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 418 - 502
Target Start/End: Complemental strand, 29257434 - 29257350
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||| || |||| ||||||||| ||||||||    
T  29257434 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttg 29257350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 418 - 502
Target Start/End: Original strand, 44889354 - 44889438
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||||  ||||||||||||| |||| ||||||||||||||||||||| || ||||| |||||||| ||||||||    
T  44889354 agagtgtgtttggatggaggaatgttttgagggaatataatgttttgagggaattcaaatactttgatgtgaattccattgtttg 44889438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 416 - 503
Target Start/End: Complemental strand, 11744804 - 11744717
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttga 503  Q
    |||||||||||||||||| | |||| ||| ||| |||||||||||| ||| |||||||||||| ||| ||||||||||||||||||||    
T  11744804 taagagtgtgtttggatgagagaatatttagagggaatgtaatgttgtgaaggaattcaactagtttaaggtgaattctattgtttga 11744717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 416 - 502
Target Start/End: Complemental strand, 1088362 - 1088276
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||| ||  ||||||||||||||||||||| |||||||||| ||||||| ||||||| ||| ||||| ||||||||    
T  1088362 taagagtgtgtttgggtggaggaatgttttgagagaatgtattgttttgaggaaattcaaatattttggggtaaattccattgtttg 1088276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 420 - 502
Target Start/End: Complemental strand, 29482888 - 29482806
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||| |||||||||||||| ||| ||| |||||||||||||||||| || |||| ||||||||| ||||||||    
T  29482888 agtgtgtttggatgggggaatgttttgagggaacgtattgttttgagggaattcaaatactttggggtgaattccattgtttg 29482806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 410 - 502
Target Start/End: Complemental strand, 28324753 - 28324661
Alignment:
Q  410 tttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||| ||||||||||||||||  ||||||||||||| |||||||||||||||| ||||||||| ||  ||||| ||||||  ||||||||    
T  28324753 tttctcttagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgagctgaattacattgtttg 28324661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 418 - 494
Target Start/End: Original strand, 31807409 - 31807484
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattct 494  Q
    |||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||  || ||||||||    
T  31807409 agagtgtgtttggatgagagaatgttttgag-gaatgtaatgttttgagggaattcaactatttaaagttgaattct 31807484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 422 - 502
Target Start/End: Complemental strand, 44346757 - 44346677
Alignment:
Q  422 tgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||| |||||||||||||| ||||||| |||||| ||||||||||| || |||| ||||||||| ||||||||    
T  44346757 tgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttg 44346677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 414 - 501
Target Start/End: Original strand, 33986000 - 33986087
Alignment:
Q  414 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgttt 501  Q
    |||||||||||||||||||| |||||||| ||||   |||||||||||||||| |||||||| || |||||||||||||  |||||||    
T  33986000 tctaagagtgtgtttggatgggggaatgtcttgaagtaatgtaatgttttgagagaattcaaatactttgaggtgaatttcattgttt 33986087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 415 - 502
Target Start/End: Original strand, 36103098 - 36103185
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||||  ||||||||||||| |||||||||||||| ||| ||||||| || ||||| |||||||  ||||||||    
T  36103098 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttaaggaaattcaaatactttgatgtgaattgcattgtttg 36103185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 415 - 501
Target Start/End: Original strand, 14236 - 14321
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgttt 501  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||||||| ||||||||||| || |||| ||||||||  |||||||    
T  14236 ctaagagtgtgtttggatg-gggaatgtttggagggaatgtaatgttttaagggaattcaaatactttggggtgaatttcattgttt 14321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 421 - 502
Target Start/End: Complemental strand, 35979084 - 35979003
Alignment:
Q  421 gtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||  ||||||||||||| ||||||||| ||  |||||||||||| || |||||||||||||| ||||||||    
T  35979084 gtgtgtttggatggaggaatgttttgagggaatgtaatcttaagagggaattcaaatactttgaggtgaattccattgtttg 35979003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 450 - 539
Target Start/End: Complemental strand, 38573522 - 38573433
Alignment:
Q  450 gaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacatt 539  Q
    ||||||| |||||||||| |||||||||| |||||| ||||||||||||||||||| || || ||| || || |||| ||||||||||||    
T  38573522 gaatgtagtgttttgaggaaattcaactactttgagttgaattctattgtttgaattcaactaaaagtagttgaatttcctcaaaacatt 38573433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 415 - 576
Target Start/End: Complemental strand, 33902828 - 33902669
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattc-aactattttgaggtgaattc-tattgtttgaatccacctc 512  Q
    ||||||||||||| ||||| ||||||| |||||| ||||||  |||||||||||||||| ||||| ||||||||||||||  |    | |||| |||  |    
T  33902828 ctaagagtgtgttgggatgggggaatg-tttgagggaatgttttgttttgagggaattcaaactactttgaggtgaattcaaaacaatagaattcac--c 33902732  T
Q  513 aaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||| || || ||||||||||||||||||||||||||| |||| ||| | |||||||||||||||    
T  33902731 aaagtagttgaattccctcaaaacattacattccctc-aaaacattcctccatccaaacacact 33902669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 416 - 475
Target Start/End: Original strand, 14991690 - 14991749
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaa 475  Q
    |||||||||||||||||| ||||||||||||||  ||||||||||||||||| |||||||    
T  14991690 taagagtgtgtttggatgggggaatgttttgaggtaatgtaatgttttgaggcaattcaa 14991749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 418 - 493
Target Start/End: Complemental strand, 37268166 - 37268091
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 493  Q
    |||||||||||||||  |||||| |||||||  |||||||||||||||||||||| || |||||||||||| ||||    
T  37268166 agagtgtgtttggataggggaatattttgaggtaatgtaatgttttgagggaatttaattattttgaggtggattc 37268091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 434 - 493
Target Start/End: Complemental strand, 40046933 - 40046874
Alignment:
Q  434 tgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 493  Q
    |||||||||||||||  ||||||||||||||||||||||||| |||||||||||| ||||    
T  40046933 tgggaatgttttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattc 40046874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 456 - 576
Target Start/End: Original strand, 42711324 - 42711437
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaat 555  Q
    |||||||||||| |||||||||| |||||| ||||| ||      ||||| || |||||| || || ||||||||||||||||||||||||||| ||||     
T  42711324 aatgttttgaggaaattcaactactttgagttgaatact------tgaattcaactcaaagtagttgaattccctcaaaacattacattccctc-aaaac 42711416  T
Q  556 atttccccatccaaacacact 576  Q
    ||| ||| |||||||||||||    
T  42711417 attccccaatccaaacacact 42711437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 418 - 502
Target Start/End: Complemental strand, 515615 - 515531
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||| ||||| ||||| || ||||| |||||||  ||||||||    
T  515615 agagtgtgtttggatggaggaatgttttgaaggaatgtaatgttttaagggagttcaaatactttgatgtgaatttcattgtttg 515531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 438 - 502
Target Start/End: Complemental strand, 15186880 - 15186816
Alignment:
Q  438 aatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||| ||||||||||||||||  ||||||| || ||| |||||||||||||||||||    
T  15186880 aatgttttgagataatgtaatgttttgagtaaattcaaatagtttaaggtgaattctattgtttg 15186816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 410 - 466
Target Start/End: Complemental strand, 32626125 - 32626069
Alignment:
Q  410 tttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgag 466  Q
    |||||||||||||||| ||||||| |||||| ||||||| |||||||||||||||||    
T  32626125 tttctctaagagtgtgcttggatgggggaatcttttgagggaatgtaatgttttgag 32626069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 523 - 578
Target Start/End: Original strand, 4156272 - 4156326
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacactat 578  Q
    ||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||    
T  4156272 aattccctcaaaacattacattccctc-aaaatattctcccatccaaacacactat 4156326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 435 - 502
Target Start/End: Original strand, 8049271 - 8049338
Alignment:
Q  435 gggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||| |||| ||||||||||||||||||||| || |||||||| ||||  ||||||||    
T  8049271 gggaatgttttgagggaatataatgttttgagggaattcaaatactttgaggtaaatttcattgtttg 8049338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 418 - 501
Target Start/End: Original strand, 9982637 - 9982719
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgttt 501  Q
    |||| ||||||||||| | ||||||||| ||  |||||||||||||||| ||||| || ||||||||||||||||| |||||||    
T  9982637 agagcgtgtttggatg-gagaatgttttaaggtaatgtaatgttttgagagaatttaaatattttgaggtgaattccattgttt 9982719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 415 - 502
Target Start/End: Complemental strand, 28190788 - 28190702
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||||||||||||||| ||| || ||||||  ||  |  |||||||| ||||||||||||||||| ||||||||    
T  28190788 ctaagagtgtgtttggatgtgggaatgtttcgagtgattgtaat-attgaaatgaattcaaatattttgaggtgaattcaattgtttg 28190702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 523 - 576
Target Start/End: Original strand, 14800065 - 14800117
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||||||||||||||||| ||||||| |||||||| |||||||||||||||||    
T  14800065 aattccctcaaaacattactttccctc-aaaatattcccccatccaaacacact 14800117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 411 - 478
Target Start/End: Original strand, 8689125 - 8689192
Alignment:
Q  411 ttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaacta 478  Q
    |||| ||| ||| ||||||||||  | ||||||||||  |||||||||||||||||||||||||||||    
T  8689125 ttctttaatagtatgtttggatggagaaatgttttgaaggaatgtaatgttttgagggaattcaacta 8689192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 451 - 502
Target Start/End: Original strand, 13144616 - 13144667
Alignment:
Q  451 aatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||| ||||||||||||| || |||||||||||||| ||||||||    
T  13144616 aatgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttg 13144667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 416 - 463
Target Start/End: Complemental strand, 27322734 - 27322687
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgtttt 463  Q
    |||||||||||||||||| | |||||||||||| ||||||||||||||    
T  27322734 taagagtgtgtttggatgggagaatgttttgagggaatgtaatgtttt 27322687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 422 - 481
Target Start/End: Original strand, 30435250 - 30435309
Alignment:
Q  422 tgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattt 481  Q
    ||||||||||||  | ||||||||||| ||||||||||||| ||||||||| ||||||||    
T  30435250 tgtgtttggatggagaaatgttttgagggaatgtaatgtttggagggaatttaactattt 30435309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 456 - 502
Target Start/End: Complemental strand, 26520484 - 26520438
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||||| || |||||||||||||| ||||||||    
T  26520484 aatgttttgagggaattcaaatactttgaggtgaattccattgtttg 26520438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 456 - 502
Target Start/End: Complemental strand, 30444978 - 30444932
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||||| || |||||||||||||| ||||||||    
T  30444978 aatgttttgagggaattcaaatactttgaggtgaattccattgtttg 30444932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 456 - 502
Target Start/End: Original strand, 34008819 - 34008865
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||||| || |||||||||||||| ||||||||    
T  34008819 aatgttttgagggaattcaaatactttgaggtgaattccattgtttg 34008865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 492
Target Start/End: Original strand, 7202885 - 7202921
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaatt 492  Q
    ||||||||||||||||||||||| |||||||||||||    
T  7202885 aatgttttgagggaattcaactactttgaggtgaatt 7202921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 578
Target Start/End: Complemental strand, 8689186 - 8689132
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacactat 578  Q
    |||||||||||||||||||||||| || |||| ||||| ||||||||||| |||||    
T  8689186 aattccctcaaaacattacattccttc-aaaacatttctccatccaaacatactat 8689132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 553
Target Start/End: Complemental strand, 9982711 - 9982660
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaa 553  Q
    |||| |||||||||||| |||||||| |||||||||||||||| ||| ||||    
T  9982711 gaattcacctcaaaatatttaaattctctcaaaacattacattaccttaaaa 9982660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 553
Target Start/End: Complemental strand, 23011809 - 23011758
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaa 553  Q
    |||| ||||||||| || || |||||||||| ||||||||||||||||||||    
T  23011809 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaa 23011758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 577
Target Start/End: Original strand, 29482815 - 29482889
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacacta 577  Q
    |||| |||| |||| || || ||||||||||||||| ||| ||||||| |||| ||| ||||||||||||||||||    
T  29482815 gaattcaccccaaagtatttgaattccctcaaaacaatacgttccctc-aaaacattcccccatccaaacacacta 29482889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 450 - 493
Target Start/End: Original strand, 32626023 - 32626066
Alignment:
Q  450 gaatgtaatgttttgagggaattcaactattttgaggtgaattc 493  Q
    |||| |||||||||||||||||||||||| ||| ||||||||||    
T  32626023 gaatataatgttttgagggaattcaactactttaaggtgaattc 32626066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 553
Target Start/End: Complemental strand, 40046871 - 40046828
Alignment:
Q  510 ctcaaaataattaaattccctcaaaacattacattccctcaaaa 553  Q
    |||||| || || |||||||||||||||||||||||||||||||    
T  40046871 ctcaaagtagttgaattccctcaaaacattacattccctcaaaa 40046828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 415 - 453
Target Start/End: Original strand, 14799976 - 14800014
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaat 453  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  14799976 ctaagagtgtgtttggatgggggaatgttttgagggaat 14800014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 502 - 576
Target Start/End: Complemental strand, 24045035 - 24044962
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| ||||||||  || || |||||| |||||||||||||||||||| |||| ||| || ||||||||||||||    
T  24045035 gaattcacctcaaggtatttgaattccttcaaaacattacattccctc-aaaacattccctcatccaaacacact 24044962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 29257359 - 29257432
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| |||| |||| || || |||||||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  29257359 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctc-aaaacattcccccatccaaacacact 29257432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 456 - 502
Target Start/End: Original strand, 29611408 - 29611454
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||||| || |||||||||||||  ||||||||    
T  29611408 aatgttttgagggaattcaaatactttgaggtgaatttcattgtttg 29611454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 33377305 - 33377378
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| |||| |||| || || ||||||||||||||| || |||||||| |||| ||| |||||||||||||||||    
T  33377305 gaattcaccccaaagtatttgaattccctcaaaacaatatattccctc-aaaacattcccccatccaaacacact 33377378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 502 - 576
Target Start/End: Complemental strand, 44889429 - 44889356
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| ||| ||||| || || |||||||||||||||||| |||||||| |||| ||| | |||||||||||||||    
T  44889429 gaattcacatcaaagtatttgaattccctcaaaacattatattccctc-aaaacattcctccatccaaacacact 44889356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 553
Target Start/End: Complemental strand, 8049323 - 8049278
Alignment:
Q  508 acctcaaaataattaaattccctcaaaacattacattccctcaaaa 553  Q
    |||||||| || || |||||||||||||||||| ||||||||||||    
T  8049323 acctcaaagtatttgaattccctcaaaacattatattccctcaaaa 8049278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 523 - 576
Target Start/End: Complemental strand, 14991746 - 14991694
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| ||||||||||||||||| |||| |||| ||| |||||||||||||||||    
T  14991746 aattgcctcaaaacattacattacctc-aaaacattcccccatccaaacacact 14991694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 505
Target Start/End: Complemental strand, 24510322 - 24510273
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 505  Q
    ||||||||||||| ||| || |||||||||||||| || |||||||||||    
T  24510322 aatgttttgaggggatttaagtattttgaggtgaactccattgtttgaat 24510273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 523 - 576
Target Start/End: Original strand, 28324691 - 28324743
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||||| |||||||||||||||||||| |||| ||| | |||||||||||||||    
T  28324691 aattccttcaaaacattacattccctc-aaaacattcctccatccaaacacact 28324743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 492
Target Start/End: Complemental strand, 31980533 - 31980492
Alignment:
Q  451 aatgtaatgttttgagggaattcaactattttgaggtgaatt 492  Q
    ||||||||||||| ||||||||||| ||||||| ||||||||    
T  31980533 aatgtaatgttttaagggaattcaaatattttggggtgaatt 31980492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 413 - 453
Target Start/End: Complemental strand, 30445003 - 30444963
Alignment:
Q  413 ctctaagagtgtgtttggatgtgggaatgttttgagagaat 453  Q
    |||||||||||||||||||||  ||||||||||||| ||||    
T  30445003 ctctaagagtgtgtttggatggaggaatgttttgagggaat 30444963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 502
Target Start/End: Complemental strand, 35404809 - 35404741
Alignment:
Q  434 tgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||  |||  |||||||| |||||||| ||||||| || ||||||||||||| || ||||||    
T  35404809 tgggaatgttacgaggtaatgtaatattttgaggaaattcaaatactttgaggtgaattttactgtttg 35404741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 502 - 574
Target Start/End: Original strand, 44346686 - 44346757
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacaca 574  Q
    |||| |||| |||| || || |||||||| |||||| ||||||||||| |||| ||| |||||||||||||||    
T  44346686 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctc-aaaacattcccccatccaaacaca 44346757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 3e-59; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 418 - 578
Target Start/End: Complemental strand, 10128133 - 10127974
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  10128133 agagtgtatttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactactttgagatgaattctattgtttgaatccacctcaaaat 10128034  T
Q  518 aattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacactat 578  Q
    |||| |||||| ||||||||||||||| | || |||||||| |||||||||||||||||||    
T  10128033 aattgaattccttcaaaacattacattacttc-aaaatattcccccatccaaacacactat 10127974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 418 - 576
Target Start/End: Complemental strand, 15660342 - 15660185
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||    
T  15660342 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagctgaattctattgtttgaatccatctcaaaat 15660243  T
Q  518 aattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| |||||||||||||||||||||| |||| |||||||| ||| |||||||||||||    
T  15660242 aattgaattccctcaaaacattacattacctc-aaaatattcccctatccaaacacact 15660185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 416 - 579
Target Start/End: Original strand, 42844541 - 42844703
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 515  Q
    ||||||||||| | |||| |||||||||||||| ||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||| |||||    
T  42844541 taagagtgtgtatagatgggggaatgttttgagggaatgtaatattttgaaggaattcaactactttgaggtgaattctattgtttgaatccacttcaaa 42844640  T
Q  516 ataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacactata 579  Q
    |||||| | |||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  42844641 ataattgatttccctcaaaacattacattacctc-aaaatatttccccatccaaacacactata 42844703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 420 - 576
Target Start/End: Original strand, 7352814 - 7352969
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 519  Q
    |||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||  ||||| ||     
T  7352814 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgatggaattcaactattttaaggtgaattctattgtttgaattcaattcaaagtag 7352913  T
Q  520 ttaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    || ||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  7352914 ttgaattccctcaaaacattacattccctc-aaaacatttccccatccaaacacact 7352969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 414 - 576
Target Start/End: Original strand, 28845867 - 28846028
Alignment:
Q  414 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctca 513  Q
    |||||||  |||||||||||  ||||||||||||| ||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||| || ||||    
T  28845867 tctaagaaagtgtttggatggaggaatgttttgagggaatgtaatgtttcgagggaattcaactactttaaggtgaattctattgtttgaattcaactca 28845966  T
Q  514 aaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    || || || |||||||||||||||||| |||||||| |||| |||||||||||||||||||||    
T  28845967 aagtagttgaattccctcaaaacattatattccctc-aaaacatttccccatccaaacacact 28846028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 418 - 576
Target Start/End: Original strand, 41498489 - 41498647
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgtttt-gagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaa 516  Q
    |||||||||||||||| |||| |||||||||||||  ||||||||| ||||||||||||| | ||| |||||||||||||||||| ||| ||||||||||    
T  41498489 agagtgtgtttggatgggggattgttttgagagaaaataatgtttttgagggaattcaaccactttaaggtgaattctattgtttaaattcacctcaaaa 41498588  T
Q  517 taattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||| |||||| |||||||||||||||||||| |||||||| | |||||||||||||||    
T  41498589 taattgaattccttcaaaacattacattccctc-aaaatattcctccatccaaacacact 41498647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 418 - 576
Target Start/End: Complemental strand, 1107211 - 1107053
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    ||||||| |||||||| |||||| ||||||| |||| |||||||||||||||||||||||| | | |||||||||||||||||||||| || |||||| |    
T  1107211 agagtgtatttggatgggggaatattttgagggaatataatgttttgagggaattcaactactctaaggtgaattctattgtttgaattcatctcaaagt 1107112  T
Q  518 aattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    | || |||||| ||||||||||||||||||| ||||| |||||| ||||||||||||||    
T  1107111 agttgaattccttcaaaacattacattcccttaaaaaaatttcctcatccaaacacact 1107053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 445 - 576
Target Start/End: Original strand, 857266 - 857396
Alignment:
Q  445 tgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacatt 544  Q
    |||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| || |||||| || || ||||||||||||||||||||||    
T  857266 tgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacatt 857365  T
Q  545 ccctcaaaaatatttccccatccaaacacact 576  Q
    ||||| |||| |||||||||||||||||||||    
T  857366 ccctc-aaaacatttccccatccaaacacact 857396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 456 - 578
Target Start/End: Complemental strand, 26251030 - 26250909
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaat 555  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||| |||| |||||    
T  26251030 aatgttttgagggaattcaactactttgaggtgaattctattatttgaatccacctcaaaataattgaatttcctcaaaacattacattacctc-aaaat 26250932  T
Q  556 atttccccatccaaacacactat 578  Q
    ||| || ||||||||||||||||    
T  26250931 attccctcatccaaacacactat 26250909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 415 - 576
Target Start/End: Complemental strand, 7352974 - 7352814
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 514  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||||  ||||||| |    | |||| ||||| ||    
T  7352974 ctaagagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgaattgaattcaaacaatagaattcaccttaa 7352875  T
Q  515 aataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| || |||||| |||||||||||||||||||| |||| ||| |||||||||||||||||    
T  7352874 aatagttgaattccatcaaaacattacattccctc-aaaacattcccccatccaaacacact 7352814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 418 - 515
Target Start/End: Original strand, 36455907 - 36456004
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 515  Q
    |||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||    
T  36455907 agagtgtgtttggatgggggaatgttttgagggaatctaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaa 36456004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 411 - 550
Target Start/End: Complemental strand, 857405 - 857266
Alignment:
Q  411 ttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacc 510  Q
    |||||| |||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||| |    | |||| ||||    
T  857405 ttctcttagagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgagttgaattcaaacaatagaattcacc 857306  T
Q  511 tcaaaataattaaattccctcaaaacattacattccctca 550  Q
    | ||| || || ||||||||||||||||||||||||||||    
T  857305 ttaaagtagttgaattccctcaaaacattacattccctca 857266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 411 - 576
Target Start/End: Complemental strand, 4896798 - 4896650
Alignment:
Q  411 ttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacc 510  Q
    |||||||| |||||||||||||| || ||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||                ||    
T  4896798 ttctctaatagtgtgtttggatggggaaatattttgagggaatgtaatgttttgagggaattcaactactttgaggtgaatt----------------cc 4896715  T
Q  511 tcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||||||||| |||||||||||||||||||||| |||| |||||||| |||||||||||||||||    
T  4896714 tcaaaataattgaattccctcaaaacattacattacctc-aaaatattcccccatccaaacacact 4896650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 456 - 576
Target Start/End: Complemental strand, 11041088 - 11040970
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaat 555  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||| || ||||||||| || || ||||| ||||||||||||||||||||| |||||    
T  11041088 aatgttttgagggaattcaactactttatggtgaattctattgtttggattcacctcaaagtagttgaattctctcaaaacattacattccctc-aaaat 11040990  T
Q  556 atttccccatccaaacacact 576  Q
    | |||||||||||||||||||    
T  11040989 a-ttccccatccaaacacact 11040970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 413 - 576
Target Start/End: Original strand, 15660178 - 15660340
Alignment:
Q  413 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctc 512  Q
    ||||||||||||||||||||  |||||| |||||||  ||||||||||||||||||||||||| ||||||||| || |||| |    | |||| || |||    
T  15660178 ctctaagagtgtgtttggataggggaatattttgaggtaatgtaatgttttgagggaattcaattattttgagatggattcaaacaatagaattcagctc 15660277  T
Q  513 aaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||| || || ||||||||||||||||||||||||||| |||| ||| || ||||||||||||||    
T  15660278 aaagtagttgaattccctcaaaacattacattccctc-aaaacattccctcatccaaacacact 15660340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 418 - 493
Target Start/End: Complemental strand, 49111471 - 49111396
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 493  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  49111471 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactattttgaggtgaattc 49111396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 418 - 535
Target Start/End: Original strand, 14982280 - 14982396
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    ||||||||||||||||  ||||||||||||| ||||||||||||||||||||||| ||||| ||| ||||||||| |||| ||||||| ||||||||| |    
T  14982280 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaatttaactactttaaggtgaattttatt-tttgaattcacctcaaagt 14982378  T
Q  518 aattaaattccctcaaaa 535  Q
    | || |||||||||||||    
T  14982379 agttgaattccctcaaaa 14982396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 418 - 578
Target Start/End: Original strand, 4896648 - 4896791
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    |||||||||||||||| |||||| |||||||  ||||||||||||||||||||||||| ||||||||||                ||| ||||||||| |    
T  4896648 agagtgtgtttggatgggggaatattttgaggtaatgtaatgttttgagggaattcaattattttgagg----------------aattcacctcaaagt 4896731  T
Q  518 aattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacactat 578  Q
    | || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4896732 agttgaattccctcaaaacattacattccctc-aaaatatttccccatccaaacacactat 4896791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 418 - 553
Target Start/End: Complemental strand, 28846030 - 28845895
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    |||||||||||||||| || ||||||||||| |||| |||||||||||||||||||||||| |||||| ||||||| |    | |||| ||||| ||| |    
T  28846030 agagtgtgtttggatggggaaatgttttgagggaatataatgttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagt 28845931  T
Q  518 aattaaattccctcaaaacattacattccctcaaaa 553  Q
    | || ||||||||| |||||||||||||||||||||    
T  28845930 agttgaattccctcgaaacattacattccctcaaaa 28845895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 418 - 502
Target Start/End: Original strand, 31473849 - 31473933
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| || ||||||||||||| |||||||||    
T  31473849 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattttattgtttg 31473933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 488 - 576
Target Start/End: Original strand, 49111382 - 49111469
Alignment:
Q  488 gaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  49111382 gaattctattgtttgaattcacctcaaaatagttgaattccctcaaaacattacattccctc-aaaacattcccccatccaaacacact 49111469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 415 - 492
Target Start/End: Original strand, 1112602 - 1112679
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaatt 492  Q
    ||||||||||||||||||| ||||||||||||||  |||||||||||| ||||||||||||||| |||||||||||||    
T  1112602 ctaagagtgtgtttggatgggggaatgttttgaggaaatgtaatgtttcgagggaattcaactactttgaggtgaatt 1112679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 419 - 539
Target Start/End: Original strand, 4441338 - 4441449
Alignment:
Q  419 gagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaata 518  Q
    |||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||         |||||||||||||||||||| ||||||||| ||    
T  4441338 gagtgtgtttggatggtggaatgttttgagggaatgtaatgttttgagggaattcaac---------gtgaattctattgtttgaattcacctcaaagta 4441428  T
Q  519 attaaattccctcaaaacatt 539  Q
     || |||| ||||||||||||    
T  4441429 gttgaatttcctcaaaacatt 4441449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 420 - 576
Target Start/End: Original strand, 10127976 - 10128131
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 519  Q
    |||||||||||||| |||||| ||||||   ||||||||||||||| ||||||||| |||||||||||| |||| |    | |||| || |||||| ||     
T  10127976 agtgtgtttggatgggggaatattttgaagtaatgtaatgttttgaaggaattcaattattttgaggtggattcaaacaatagaattcatctcaaagtag 10128075  T
Q  520 ttaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    || ||||||||||||||||||||||| ||| |||| ||| ||||||||||| |||||    
T  10128076 ttgaattccctcaaaacattacattctctc-aaaacattcccccatccaaatacact 10128131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 415 - 539
Target Start/End: Original strand, 26250906 - 26251030
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 514  Q
    |||| |||||||||||||| |||||| |||||||  ||||||||||||||||| ||||||| |||||||||||| |||| | |  | |||| ||||||||    
T  26250906 ctaatagtgtgtttggatgagggaatattttgaggtaatgtaatgttttgaggaaattcaattattttgaggtggattcaaataatagaattcacctcaa 26251005  T
Q  515 aataattaaattccctcaaaacatt 539  Q
    | || || |||||||||||||||||    
T  26251006 agtagttgaattccctcaaaacatt 26251030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 412 - 496
Target Start/End: Complemental strand, 36456091 - 36456007
Alignment:
Q  412 tctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctat 496  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||| |||||||| |||||||||| ||| |||||||||||||    
T  36456091 tctctaagagtgtgtttggatggaggaatgttttgagggaatgtaatattttgaggaaattcaactactttaaggtgaattctat 36456007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 415 - 576
Target Start/End: Original strand, 1107048 - 1107209
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttga-gagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctca 513  Q
    ||||||||||||||||||| || ||| |||| | | |||||||||||||||| |||||||||||| |||||| ||||||| |    | |||| ||||| |    
T  1107048 ctaagagtgtgtttggatgaggaaatttttttaagggaatgtaatgttttgaaggaattcaactactttgagatgaattcaaacaatagaattcacctta 1107147  T
Q  514 aaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
     | || || |||||||||||||||||| |||||||| |||||||| ||||||||||| |||||    
T  1107148 gagtagttgaattccctcaaaacattatattccctc-aaaatattcccccatccaaatacact 1107209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 421 - 502
Target Start/End: Original strand, 10633035 - 10633116
Alignment:
Q  421 gtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| || |||||||||||||  ||||||||    
T  10633035 gtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaatttcattgtttg 10633116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 418 - 502
Target Start/End: Original strand, 2125857 - 2125941
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||| |||||| ||||||| ||||||| |||||||||||||||||| || |||| ||||||||| ||||||||    
T  2125857 agagtgtgtttggatgggggaatattttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgtttg 2125941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 416 - 492
Target Start/End: Complemental strand, 41498651 - 41498575
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaatt 492  Q
    ||||||||||||||||||  ||||| ||||||| |||||||||||||||| ||||||||| ||||||||||||||||    
T  41498651 taagagtgtgtttggatggaggaatattttgagggaatgtaatgttttgaaggaattcaattattttgaggtgaatt 41498575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 413 - 491
Target Start/End: Original strand, 11040963 - 11041040
Alignment:
Q  413 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaat 491  Q
    |||| |||||||||||||||| |||||| ||||||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  11040963 ctcttagagtgtgtttggatg-gggaatattttgagggaatgtaatgttttgagagaattcaactactttgaggtgaat 11041040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 418 - 495
Target Start/End: Complemental strand, 1112781 - 1112704
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattcta 495  Q
    ||||| |||||||||| ||| ||||||||||  |||||||||||| ||||||||||||||| ||||||||||||||||    
T  1112781 agagtttgtttggatggggggatgttttgagcaaatgtaatgtttcgagggaattcaactactttgaggtgaattcta 1112704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 420 - 553
Target Start/End: Complemental strand, 42844700 - 42844567
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 519  Q
    |||||||||||||| || ||| |||||||  |||||||||||||||||||| |||| |||||||| ||| |||| |    | |||| ||||||||| ||     
T  42844700 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaaatcaattattttgaagtggattcaaacaatagaattcacctcaaagtag 42844601  T
Q  520 ttaaattccctcaaaacattacattccctcaaaa 553  Q
    || |||||| |||||| |||||||||||||||||    
T  42844600 ttgaattccttcaaaatattacattccctcaaaa 42844567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 426 - 502
Target Start/End: Original strand, 1539649 - 1539725
Alignment:
Q  426 tttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||  ||||||||||||| |||||||||||||||||||||||||| || |||||||||||||  ||||||||    
T  1539649 tttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttgaggtgaatttcattgtttg 1539725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 418 - 489
Target Start/End: Original strand, 5715744 - 5715815
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtga 489  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||| || ||||| ||||    
T  5715744 agagtgtgtttggatgagggaatgttttgagataatgtaatgttttgaggtaattcaaatactttgatgtga 5715815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 418 - 487
Target Start/End: Complemental strand, 11348396 - 11348327
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggt 487  Q
    ||||||| |||||||| ||||||||||| || ||||||||||||||||||||||||||| | ||||||||    
T  11348396 agagtgtatttggatgggggaatgttttaagggaatgtaatgttttgagggaattcaacaactttgaggt 11348327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 456 - 524
Target Start/End: Complemental strand, 12914119 - 12914051
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaa 524  Q
    ||||||||||||||||||||||||||| || |||||| |||||||||||| ||||||||| || |||||    
T  12914119 aatgttttgagggaattcaactattttaagatgaattttattgtttgaattcacctcaaagtagttaaa 12914051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 460 - 576
Target Start/End: Complemental strand, 14982396 - 14982282
Alignment:
Q  460 ttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatattt 559  Q
    ||||||||||||||||||| |||||||||||||| |   |   ||| ||||| ||| || |||||||||||||||||||||||||||||| |||| |||     
T  14982396 ttttgagggaattcaactactttgaggtgaattcaaaaataa-aattcaccttaaagtagttaaattccctcaaaacattacattccctc-aaaacattc 14982299  T
Q  560 ccccatccaaacacact 576  Q
    | |||||||||||||||    
T  14982298 ctccatccaaacacact 14982282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 418 - 502
Target Start/End: Original strand, 16516171 - 16516255
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||| |||||||||||||  |||||||||||||||| |||||| || || ||||| ||||| || ||||||||    
T  16516171 agagtgtgtttggatgggggaatgttttgacggaatgtaatgttttgaaggaatttaaatactttgatgtgaactccattgtttg 16516255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 418 - 502
Target Start/End: Original strand, 35470122 - 35470206
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||| ||||  | ||||||||||| ||||||| |||||||||||||||||| || |||| ||||||||| ||||||||    
T  35470122 agagtgtgtttagatggtgaaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgtttg 35470206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 416 - 502
Target Start/End: Original strand, 41139473 - 41139557
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||| ||||| | ||||||  ||||||||||||||||| ||||||| || ||| |||||||||||||||||||    
T  41139473 taagagtgtgtttggatg-gggaa-gctttgaggtaatgtaatgttttgaggaaattcaaatacttttaggtgaattctattgtttg 41139557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 535
Target Start/End: Original strand, 46724195 - 46724241
Alignment:
Q  489 aattctattgtttgaatccacctcaaaataattaaattccctcaaaa 535  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  46724195 aattctattgtttgaatccacctcaaaataattgaattccctcaaaa 46724241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 418 - 500
Target Start/End: Complemental strand, 55266934 - 55266852
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtt 500  Q
    ||||||||||||||||   ||||||||||||  ||| |||| ||||||||||||||||||| ||| ||||||||| |||||||    
T  55266934 agagtgtgtttggatggatgaatgttttgaggaaatataatattttgagggaattcaactactttaaggtgaattttattgtt 55266852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 445 - 502
Target Start/End: Original strand, 29091164 - 29091221
Alignment:
Q  445 tgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||| |||||||||||||||||||||||||| || ||||| |||||||||||||||||    
T  29091164 tgagggaatgtaatgttttgagggaattcaaatactttgatgtgaattctattgtttg 29091221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 410 - 467
Target Start/End: Complemental strand, 31742931 - 31742874
Alignment:
Q  410 tttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagg 467  Q
    |||||| |||||||||||||||||  ||||||||||||| ||||||||||||||||||    
T  31742931 tttctcaaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagg 31742874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 502 - 576
Target Start/End: Complemental strand, 2125932 - 2125859
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| |||| |||| || || ||||||||||||||| ||||||||||| |||||||| |||||||||||||||||    
T  2125932 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctc-aaaatattcccccatccaaacacact 2125859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 456 - 502
Target Start/End: Complemental strand, 53760825 - 53760779
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||    
T  53760825 aatgttttgagggaattcaaatattttgatgtgaattctattgtttg 53760779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 507 - 576
Target Start/End: Complemental strand, 31473919 - 31473851
Alignment:
Q  507 cacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||||||| || || |||||||||| |||||||||||||||| |||| ||| |||||||||||||||||    
T  31473919 cacctcaaagtatttgaattccctcataacattacattccctc-aaaacattcccccatccaaacacact 31473851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 508 - 577
Target Start/End: Complemental strand, 31742845 - 31742777
Alignment:
Q  508 acctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacacta 577  Q
    |||||||||||||| |||||||||||||||||||| | |||  |||||||| | ||||||||||||||||    
T  31742845 acctcaaaataattgaattccctcaaaacattacactacct-taaaatattcctccatccaaacacacta 31742777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 507 - 575
Target Start/End: Complemental strand, 10633102 - 10633035
Alignment:
Q  507 cacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacac 575  Q
    ||||||||| || || |||||||||| |||||||||||||||| |||| ||| ||||||||||||||||    
T  10633102 cacctcaaagtatttgaattccctcataacattacattccctc-aaaacattcccccatccaaacacac 10633035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 436 - 504
Target Start/End: Original strand, 12169037 - 12169104
Alignment:
Q  436 ggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaa 504  Q
    ||||||||||||| ||| |||||||||||||  |||||||||||||| | ||||||||| |||||||||    
T  12169037 ggaatgttttgagggaaagtaatgttttgaga-aattcaactattttaaagtgaattctgttgtttgaa 12169104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 450 - 502
Target Start/End: Original strand, 26534525 - 26534577
Alignment:
Q  450 gaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||||||||||| || ||||  |||||||||||||||||    
T  26534525 gaatgtaatgttttgagggaattcaaatactttgttgtgaattctattgtttg 26534577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 416 - 492
Target Start/End: Original strand, 52493924 - 52493998
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaatt 492  Q
    |||||||||||||||||| |||||||||||||   |||||||||||| ||||||||| || |||||| |||||||||    
T  52493924 taagagtgtgtttggatg-gggaatgttttgaagtaatgtaatgttt-gagggaattaaaatatttttaggtgaatt 52493998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 418 - 493
Target Start/End: Complemental strand, 467960 - 467887
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 493  Q
    |||||||||||||||| | |||||||||||  |||||||||||||||| |||||||||| | ||||| ||||||||    
T  467960 agagtgtgtttggatg-gagaatgttttgatggaatgtaatgttttga-ggaattcaaccactttgaagtgaattc 467887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 420 - 487
Target Start/End: Original strand, 31742778 - 31742845
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggt 487  Q
    ||||||||||||||  ||||| |||| ||  | ||||||||||||||||||||||| |||||||||||    
T  31742778 agtgtgtttggatggaggaatattttaaggtagtgtaatgttttgagggaattcaattattttgaggt 31742845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 507 - 553
Target Start/End: Complemental strand, 1539711 - 1539665
Alignment:
Q  507 cacctcaaaataattaaattccctcaaaacattacattccctcaaaa 553  Q
    ||||||||| || || |||||||||||||||||||||||||||||||    
T  1539711 cacctcaaagtatttgaattccctcaaaacattacattccctcaaaa 1539665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 456 - 502
Target Start/End: Original strand, 42775643 - 42775689
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||||| || |||||||||||||| ||||||||    
T  42775643 aatgttttgagggaattcaaatactttgaggtgaattccattgtttg 42775689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 507 - 576
Target Start/End: Complemental strand, 1112675 - 1112607
Alignment:
Q  507 cacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||||||| || || ||||||||| |||||||||||| |||| |||| ||| |||||||||||||||||    
T  1112675 cacctcaaagtagttgaattccctcgaaacattacatttcctc-aaaacattcccccatccaaacacact 1112607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 523 - 576
Target Start/End: Complemental strand, 4441391 - 4441339
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||||||||||||||||||||||||| |||| ||| | |||||||||||||||    
T  4441391 aattccctcaaaacattacattccctc-aaaacattccaccatccaaacacact 4441339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 511 - 576
Target Start/End: Complemental strand, 16516237 - 16516173
Alignment:
Q  511 tcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||| || ||||||||| ||||||||||||||||| || |||| ||| |||||||||||||||||    
T  16516237 tcaaagtatttaaattccttcaaaacattacattccgtc-aaaacattcccccatccaaacacact 16516173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 21012611 - 21012566
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgttt 501  Q
    ||||||||||||||||| || ||||||||||||||||| |||||||    
T  21012611 aatgttttgagggaatttaaatattttgaggtgaattccattgttt 21012566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 523 - 576
Target Start/End: Complemental strand, 36455961 - 36455909
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||||||||||||||||| |||||||| |||| ||| |||||||||||||||||    
T  36455961 aattccctcaaaacattagattccctc-aaaacattcccccatccaaacacact 36455909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 465
Target Start/End: Complemental strand, 42543024 - 42542979
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttga 465  Q
    ||||||||||||||  ||||||||||||| ||||||||||||||||    
T  42543024 agtgtgtttggatggtggaatgttttgagggaatgtaatgttttga 42542979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 450 - 501
Target Start/End: Complemental strand, 16300260 - 16300209
Alignment:
Q  450 gaatgtaatgttttgagggaattcaactattttgaggtgaattctattgttt 501  Q
    |||||||||||||||||  ||||||| || |||||||||||||| |||||||    
T  16300260 gaatgtaatgttttgagaaaattcaaatactttgaggtgaattccattgttt 16300209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 578
Target Start/End: Original strand, 19461755 - 19461809
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacactat 578  Q
    ||||| |||||||||||||||| | |||||| |||||||||||||||| |||||||    
T  19461755 aattcgctcaaaacattacattacttcaaaa-tatttccccatccaaaaacactat 19461809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 502
Target Start/End: Complemental strand, 19461807 - 19461725
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||| |||||||| || ||| ||||||   |||||||||||||||| |||||||| || |||||  | ||||||||||||||    
T  19461807 agtgtttttggatggggaaatattttgaagtaatgtaatgttttgagcgaattcaaataatttgatataaattctattgtttg 19461725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 502 - 576
Target Start/End: Complemental strand, 35470197 - 35470124
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| |||| |||| || || ||||||||||||||| ||||||||||| |||| ||||| ||||| |||||||||    
T  35470197 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctc-aaaacatttcaccatctaaacacact 35470124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 416 - 502
Target Start/End: Original strand, 42776635 - 42776721
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||||||   ||||||||| ||   |||||||||||||||  ||||||| || ||| |||||||||  ||||||||    
T  42776635 taagagtgtgtttggatggaagaatgtttttaggttatgtaatgttttgagtaaattcaaatacttttaggtgaatttcattgtttg 42776721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 493
Target Start/End: Complemental strand, 4441449 - 4441412
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattc 493  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  4441449 aatgttttgaggaaattcaactactttgaggtgaattc 4441412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 437 - 494
Target Start/End: Original strand, 10354361 - 10354418
Alignment:
Q  437 gaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattct 494  Q
    ||||||||||||  ||||||||||||||||  |||| || ||||| ||||||||||||    
T  10354361 gaatgttttgaggtaatgtaatgttttgagaaaattgaaatatttggaggtgaattct 10354418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 523 - 576
Target Start/End: Original strand, 11348342 - 11348394
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||||||||||||||||||||||||  |||| ||| ||||||||||| |||||    
T  11348342 aattccctcaaaacattacattccct-taaaacattcccccatccaaatacact 11348394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 492
Target Start/End: Complemental strand, 21012535 - 21012494
Alignment:
Q  451 aatgtaatgttttgagggaattcaactattttgaggtgaatt 492  Q
    ||||||||||| ||||||||||||| ||||||||||| ||||    
T  21012535 aatgtaatgttatgagggaattcaaatattttgaggtaaatt 21012494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 539
Target Start/End: Original strand, 21012574 - 21012611
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacatt 539  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  21012574 gaattcacctcaaaatatttaaattccctcaaaacatt 21012611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 453
Target Start/End: Complemental strand, 46243148 - 46243115
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaat 453  Q
    |||||||||||||| |||||||||||||||||||    
T  46243148 agtgtgtttggatgggggaatgttttgagagaat 46243115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 542 - 579
Target Start/End: Original strand, 46724230 - 46724266
Alignment:
Q  542 attccctcaaaaatatttccccatccaaacacactata 579  Q
    |||||||||||| |||||||||||||||||||||||||    
T  46724230 attccctcaaaa-tatttccccatccaaacacactata 46724266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 502 - 550
Target Start/End: Complemental strand, 29091212 - 29091164
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctca 550  Q
    |||| ||| ||||| || || ||||||||||||||||||||||||||||    
T  29091212 gaattcacatcaaagtatttgaattccctcaaaacattacattccctca 29091164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 528 - 576
Target Start/End: Original strand, 31742874 - 31742921
Alignment:
Q  528 cctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||||||||||||||||||||| |||| ||| | |||||||||||||||    
T  31742874 cctcaaaacattacattccctc-aaaacattcctccatccaaacacact 31742921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 416 - 502
Target Start/End: Original strand, 31947588 - 31947675
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaa---tgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||| |||||||||| | |||||||||||| |||   |||||||||  ||||||||||||  ||  |||||||||||| ||||||||    
T  31947588 taagagtatgtttggatgggagaatgttttgagggaatattgtaatgttacgagggaattcaa--atactgaggtgaattccattgtttg 31947675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 438 - 502
Target Start/End: Complemental strand, 46242597 - 46242533
Alignment:
Q  438 aatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||  ||| ||||||||||| |||||  || || |||||||||||||| ||||||||    
T  46242597 aatgttttgaggaaatataatgttttgaaggaatcaaaatactttgaggtgaattccattgtttg 46242533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 3e-56; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 413 - 576
Target Start/End: Original strand, 5644672 - 5644834
Alignment:
Q  413 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctc 512  Q
    ||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  5644672 ctctaagagtgtgtttgaatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaacccacctc 5644771  T
Q  513 aaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||||||| |||||||||||||||||||||| |||| ||||  || |||||||||||||||||    
T  5644772 aaaataattgaattccctcaaaacattacattacctc-aaaacgttcccccatccaaacacact 5644834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 416 - 576
Target Start/End: Original strand, 29065817 - 29065976
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 515  Q
    ||||||||||||||||||   |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29065817 taagagtgtgtttggatggatgaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaa 29065916  T
Q  516 ataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||||| |||||||||||||||||||||| |||  |||| ||| | |||||||||||||||    
T  29065917 ataattgaattccctcaaaacattacattacct-taaaacattcctccatccaaacacact 29065976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 416 - 576
Target Start/End: Original strand, 40110735 - 40110895
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattg-tttgaatccacctcaa 514  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||| ||||||||    
T  40110735 taagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgttttgaattcacctcaa 40110834  T
Q  515 aataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    | || || |||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  40110835 agtagttgaattccctcaaaacattacattccctc-gaaacatttccccatccaaacacact 40110895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 424 - 576
Target Start/End: Complemental strand, 21636038 - 21635887
Alignment:
Q  424 tgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaa 523  Q
    |||||||||| || ||||||||||| |||||||||||||||| |||||| ||||| |||||| ||||||||||||||||||||||||||||||||||| |    
T  21636038 tgtttggatggggaaatgttttgagggaatgtaatgttttgaaggaatttaactactttgagatgaattctattgtttgaatccacctcaaaataattga 21635939  T
Q  524 attccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    || |||||||||||||||||| |||| ||||||||  ||||||||| ||||||    
T  21635938 atcccctcaaaacattacattacctc-aaaatattctcccatccaagcacact 21635887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 410 - 576
Target Start/End: Complemental strand, 2057562 - 2057397
Alignment:
Q  410 tttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccac 509  Q
    ||||||| |||||||||||||||| |||||| ||||||| ||| ||||||||||||||||||||||||| ||  ||||||||| |||||||||||  |||    
T  2057562 tttctcttagagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaactacttcaaggtgaattttattgtttgaactcac 2057463  T
Q  510 ctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||||| || || ||||||||||||||||||||||| ||| |||| ||| |||||||||||||||||    
T  2057462 ctcaaagtagttgaattccctcaaaacattacattcgctc-aaaacattcccccatccaaacacact 2057397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 415 - 579
Target Start/End: Original strand, 43955514 - 43955674
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 514  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||| || |||||||||   || |||| ||||| ||    
T  43955514 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttaagatgaattcta---ttagaatgcaccttaa 43955610  T
Q  515 aataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacactata 579  Q
    | || || ||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  43955611 agtagttgaattccctcaaaacattacattccctc-aaaacattcccccatccaaacacactata 43955674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 450 - 579
Target Start/End: Original strand, 46069423 - 46069548
Alignment:
Q  450 gaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctc 549  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||  ||||||||||| ||||    
T  46069423 gaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccatctcaaaataattgaattccctc--aacattacattacctc 46069520  T
Q  550 aaaaatatttccccatccaaacacactata 579  Q
      ||||||| ||||||||||||||||||||    
T  46069521 --aaatattcccccatccaaacacactata 46069548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 415 - 576
Target Start/End: Original strand, 2057392 - 2057552
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 514  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||| |    |  ||| |||||  |    
T  2057392 ctaagagtgtgtttggatgggggaatgttttgagcgaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaataaaattcaccttga 2057491  T
Q  515 aataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    | || || ||||||||||||||||||| ||||||| |||||||| |||||||||||||||||    
T  2057492 agtagttgaattccctcaaaacattactttccctc-aaaatattcccccatccaaacacact 2057552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 415 - 576
Target Start/End: Complemental strand, 40110900 - 40110739
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc-tattgtttgaatccacctca 513  Q
    ||||||||||||||||||| || ||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||  |    | |||| ||||| |    
T  40110900 ctaagagtgtgtttggatggggaaatgtttcgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcacctta 40110801  T
Q  514 aaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    || || || ||||||||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  40110800 aagtagttgaattccctcaaaacattacattccctc-aaaacattcccccatccaaacacact 40110739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 420 - 576
Target Start/End: Complemental strand, 43955671 - 43955519
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 519  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||| ||||| ||||||    | |||| || || ||| ||     
T  43955671 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgcattcta---atagaattcatcttaaagtag 43955575  T
Q  520 ttaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    || ||||||||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  43955574 ttgaattccctcaaaacattacattccctc-aaaacattcccccatccaaacacact 43955519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 414 - 553
Target Start/End: Original strand, 34388261 - 34388400
Alignment:
Q  414 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctca 513  Q
    |||||||||||||||||||| || ||| |||||||  || |||||||| |||| ||||||||||| ||| |||||||||| ||||||||||  |||||||    
T  34388261 tctaagagtgtgtttggatggggaaatattttgaggaaaagtaatgttctgagagaattcaactactttaaggtgaattccattgtttgaactcacctca 34388360  T
Q  514 aaataattaaattccctcaaaacattacattccctcaaaa 553  Q
    || || || ||||||||||||| |||||||||||||||||    
T  34388361 aagtagttgaattccctcaaaatattacattccctcaaaa 34388400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 422 - 576
Target Start/End: Complemental strand, 49052937 - 49052788
Alignment:
Q  422 tgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataatt 521  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| || |||||| || ||    
T  49052937 tgtgtttggatg-gggaatgttt-gag-gaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagtt 49052841  T
Q  522 aaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
     ||||| |||||||||||||||| |||| |||| |||| | ||||||||||||||    
T  49052840 gaattcactcaaaacattacatt-cctc-aaaacattttctcatccaaacacact 49052788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 418 - 553
Target Start/End: Complemental strand, 5644836 - 5644701
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    |||||||||||||||| ||||| ||||||||  ||||||||||||||||||||||||| ||||||||||||  ||| |    | |||| ||||||||| |    
T  5644836 agagtgtgtttggatgggggaacgttttgaggtaatgtaatgttttgagggaattcaattattttgaggtgggttcaaacaatagaattcacctcaaagt 5644737  T
Q  518 aattaaattccctcaaaacattacattccctcaaaa 553  Q
    | || |||||||||||||||||||||||||||||||    
T  5644736 agttgaattccctcaaaacattacattccctcaaaa 5644701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 418 - 553
Target Start/End: Complemental strand, 29065978 - 29065843
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    ||||||||||||||||  |||||||||| ||  ||||||||||||||||||||||||| |||||||||||| |||| |    | |||| ||||||||| |    
T  29065978 agagtgtgtttggatggaggaatgttttaaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 29065879  T
Q  518 aattaaattccctcaaaacattacattccctcaaaa 553  Q
    | || |||||||||||||||||||||||||||||||    
T  29065878 agttgaattccctcaaaacattacattccctcaaaa 29065843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 414 - 505
Target Start/End: Original strand, 31632718 - 31632809
Alignment:
Q  414 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 505  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| || |||||||||||||| |||||||||||    
T  31632718 tctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttgaat 31632809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 450 - 576
Target Start/End: Complemental strand, 44915322 - 44915197
Alignment:
Q  450 gaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctc 549  Q
    |||| |||||||||||||||||||||||| | | |||||||||||||||||||||| ||||||||| || || |||||| |||||||||||| |||||||    
T  44915322 gaatttaatgttttgagggaattcaactactctaaggtgaattctattgtttgaattcacctcaaagtagttgaattccttcaaaacattacgttccctc 44915223  T
Q  550 aaaaatatttccccatccaaacacact 576  Q
    ||||| |||  | ||||||||||||||    
T  44915222 aaaaa-attctctcatccaaacacact 44915197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 456 - 576
Target Start/End: Original strand, 40854007 - 40854127
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaatt-ccctcaaaacattacattccctcaaaaa 554  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||| || |||||| || || |||| ||||||||| ||||||||||||| | ||    
T  40854007 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattcccctcaaaatattacattccctc-agaa 40854105  T
Q  555 tatttccccatccaaacacact 576  Q
     |||||||||||||||||||||    
T  40854106 catttccccatccaaacacact 40854127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 416 - 572
Target Start/End: Original strand, 21635883 - 21636038
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 515  Q
    |||||||||| ||||||| | |||| |||||||  |||||||||||||||||| |||||| |||||||||||| |||| |    | |||| || ||||||    
T  21635883 taagagtgtgcttggatgggagaatattttgaggtaatgtaatgttttgaggggattcaattattttgaggtggattcaaacaatagaattcatctcaaa 21635982  T
Q  516 ataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaaca 572  Q
     || ||||||||| |||||||||||||||||||| |||| |||||||||||||||||    
T  21635983 gtagttaaattccttcaaaacattacattccctc-aaaacatttccccatccaaaca 21636038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 418 - 576
Target Start/End: Complemental strand, 34388424 - 34388267
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    |||||||||||| |||  ||||||||||||| ||||||||| ||||||||||||||||||| |||||||||| ||| |    | |||| ||||| ||| |    
T  34388424 agagtgtgtttgaatgatggaatgttttgagggaatgtaatattttgagggaattcaactactttgaggtgagttcaaacaatggaattcaccttaaagt 34388325  T
Q  518 aattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    | || ||||| |||| |||||||| || |||| ||||||||||||||||||||||||||    
T  34388324 agttgaattctctcagaacattacttttcctc-aaaatatttccccatccaaacacact 34388267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 413 - 502
Target Start/End: Complemental strand, 35777019 - 35776930
Alignment:
Q  413 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| || |||||||||||||| ||| ||||    
T  35777019 ctctaagagtgtgtttggatgagggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattccattatttg 35776930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 418 - 502
Target Start/End: Complemental strand, 26162196 - 26162112
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| || |||||||||||||| ||||||||    
T  26162196 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttg 26162112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 413 - 576
Target Start/End: Original strand, 46481941 - 46482102
Alignment:
Q  413 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctc 512  Q
    ||||||||||||||||||||| |  ||| ||| || ||||||||||||||||||| |||| ||||||||  || ||||||||||||||||||| || |||    
T  46481941 ctctaagagtgtgtttggatgggaaaatatttcgaaagaatgtaatgttttgaggaaatttaactatttgaagatgaattctattgtttgaattcaactc 46482040  T
Q  513 aaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
     ||||| || ||||  |||||||||||||||||| || || | ||||| |||| ||||||||||    
T  46482041 -aaatagttgaattttctcaaaacattacattccttc-aacacatttctccattcaaacacact 46482102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 413 - 502
Target Start/End: Complemental strand, 28539232 - 28539143
Alignment:
Q  413 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||| |||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||| || |||| ||||||||| ||||||||    
T  28539232 ctcttagagtgtgtttggatgggggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgtttg 28539143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 416 - 574
Target Start/End: Original strand, 49052784 - 49052937
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 515  Q
    |||||||||||||||||| |  ||||||||||| ||||||||||||||||| ||||||||||| |||||| ||||||| |    | |||| ||||| |||    
T  49052784 taagagtgtgtttggatgagaaaatgttttgag-gaatgtaatgttttgagtgaattcaactactttgagttgaattcaaacaatagaattcaccttaaa 49052882  T
Q  516 ataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacaca 574  Q
     || || |||||||||||||||||||||| ||||||| |   |||||||||||||||||    
T  49052883 gtagttgaattccctcaaaacattacatt-cctcaaaca---ttccccatccaaacaca 49052937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 411 - 502
Target Start/End: Complemental strand, 29639281 - 29639190
Alignment:
Q  411 ttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||| ||||||||||| |||||| ||||||||||| || |||||||||||| ||||| ||||||| ||||||||||||||||| ||||||||    
T  29639281 ttctttaagagtgtgtatggatgggggaatgttttcagggaatgtaatgttatgaggaaattcaaatattttgaggtgaattccattgtttg 29639190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 416 - 502
Target Start/End: Complemental strand, 25189287 - 25189201
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||| || ||||| |||||||  ||||||||    
T  25189287 taagagtgtgtttggatgtgggaatgttttgaggtaatgcaatgttttgagggaattcaaatactttgaagtgaatttcattgtttg 25189201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 416 - 502
Target Start/End: Complemental strand, 39342703 - 39342617
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||| || |||| ||||||||| ||||||||    
T  39342703 taagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttg 39342617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 413 - 502
Target Start/End: Complemental strand, 6498829 - 6498740
Alignment:
Q  413 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||| ||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| || ||||| |||||| | ||||||||    
T  6498829 ctcttagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttgatgtgaataccattgtttg 6498740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 413 - 502
Target Start/End: Complemental strand, 14603326 - 14603237
Alignment:
Q  413 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||| || |||| ||| ||||| ||||||||    
T  14603326 ctctaagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtaaattccattgtttg 14603237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 422 - 502
Target Start/End: Complemental strand, 23455302 - 23455222
Alignment:
Q  422 tgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||| |||||||||||||| ||||||| |||||||||||||||||| || |||| ||||||||| ||||||||    
T  23455302 tgtgtttggatgagggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgtttg 23455222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 415 - 547
Target Start/End: Original strand, 44915192 - 44915324
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 514  Q
    ||||||||||||||||||| | |||| ||||||| ||| |||||||||||| |||||||||||| |||||||||||||| |    | |||| ||||| |     
T  44915192 ctaagagtgtgtttggatgagagaattttttgagggaacgtaatgttttgaaggaattcaactactttgaggtgaattcaaacaatagaattcaccttag 44915291  T
Q  515 aataattaaattccctcaaaacattacattccc 547  Q
    | || || |||||||||||||||||| ||||||    
T  44915292 agtagttgaattccctcaaaacattaaattccc 44915324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 418 - 487
Target Start/End: Complemental strand, 34399008 - 34398938
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagg-gaattcaactattttgaggt 487  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  34399008 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtgaattcaactactttgaggt 34398938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 418 - 502
Target Start/End: Complemental strand, 18789305 - 18789221
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||||  ||||| |||||||||||| ||||||| ||||||||||||| || ||| |||||||||| ||||||||    
T  18789305 agagtgtgtttggatggaggaatattttgagagaatataatgttatgagggaattcaaatactttaaggtgaattccattgtttg 18789221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 418 - 502
Target Start/End: Complemental strand, 23548670 - 23548586
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||||  ||||||||||||| ||||||| |||||||||| ||||||| || |||| ||||||||| ||||||||    
T  23548670 agagtgtgtttggatggaggaatgttttgagggaatgtattgttttgaggaaattcaaatactttggggtgaattccattgtttg 23548586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 418 - 502
Target Start/End: Original strand, 35455804 - 35455888
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||| || |||| ||| ||||| ||||||||    
T  35455804 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtaaattccattgtttg 35455888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 419 - 502
Target Start/End: Complemental strand, 9784989 - 9784906
Alignment:
Q  419 gagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||  ||||||||||||| ||||||| |||||||||||||||||| || |||| |||||| || ||||||||    
T  9784989 gagtgtgtttggatggaggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaaatccattgtttg 9784906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 415 - 539
Target Start/End: Complemental strand, 40854132 - 40854007
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttga-gggaattcaactattttgaggtgaattctattgtttgaatccacctca 513  Q
    ||||||||||||||||||| || |||||| |||| ||||||||| |||||| ||||||||||||| |||||| ||||||| |    | |||| ||||| |    
T  40854132 ctaagagtgtgtttggatggggaaatgttctgagggaatgtaatattttgaggggaattcaactactttgagttgaattcaaacaatagaattcacctta 40854033  T
Q  514 aaataattaaattccctcaaaacatt 539  Q
    || || || |||||||||||||||||    
T  40854032 aagtagttgaattccctcaaaacatt 40854007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 420 - 502
Target Start/End: Complemental strand, 22391644 - 22391562
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||| ||| |  ||||||||||| ||||||||||||||||| ||||| || ||||||||||||||||  ||||||||    
T  22391644 agtgtgtttgaatgagataatgttttgagggaatgtaatgttttgagagaatttaaatattttgaggtgaatttcattgtttg 22391562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 420 - 547
Target Start/End: Complemental strand, 46069545 - 46069421
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 519  Q
    |||||||||||||| |||||| ||| |||  |||||||||||  |||||||||||| ||||||||| || |||| |    | |||| ||||||||| ||     
T  46069545 agtgtgtttggatgggggaatattt-gaggtaatgtaatgtt--gagggaattcaattattttgagatggattcaaacaatagaattcacctcaaagtag 46069449  T
Q  520 ttaaattccctcaaaacattacattccc 547  Q
    || |||||||||||||||||||||||||    
T  46069448 ttgaattccctcaaaacattacattccc 46069421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 413 - 576
Target Start/End: Complemental strand, 46482109 - 46481948
Alignment:
Q  413 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctc 512  Q
    |||| |||||||||||| |||  | ||||| ||||  |||||||||||||||||  ||||||||||||| ||| ||||||| |    | |||| || ||     
T  46482109 ctcttagagtgtgtttgaatggagaaatgtgttgaaggaatgtaatgttttgagaaaattcaactattt-gagttgaattcaaacaatagaattcatctt 46482011  T
Q  513 aaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
     ||||| ||||||| ||||||||||||||||||  ||  |||||||| ||||||||||||||||    
T  46482010 caaatagttaaatttcctcaaaacattacattctttc-gaaatattttcccatccaaacacact 46481948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 507 - 553
Target Start/End: Original strand, 22391576 - 22391622
Alignment:
Q  507 cacctcaaaataattaaattccctcaaaacattacattccctcaaaa 553  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||    
T  22391576 cacctcaaaatatttaaattctctcaaaacattacattccctcaaaa 22391622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 26162121 - 26162194
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| ||||||||| || || |||||||||| |||||||||||||||| |||| ||| |||||||||||||||||    
T  26162121 gaattcacctcaaagtatttgaattccctcataacattacattccctc-aaaacattcccccatccaaacacact 26162194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 416 - 502
Target Start/End: Original strand, 30524253 - 30524339
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||| ||||||  | ||||||||||  |||||||||||||||||||||||||| || |||| | ||||||  ||||||||    
T  30524253 taagagtgtgtatggatggagtaatgttttgaaggaatgtaatgttttgagggaattcaaatactttgggatgaatttcattgtttg 30524339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 502 - 576
Target Start/End: Complemental strand, 31632797 - 31632724
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| ||||||||| || || |||||||||| |||||||||||||||| |||| ||| |||||||||||||||||    
T  31632797 gaattcacctcaaagtatttgaattccctcataacattacattccctc-aaaacattcccccatccaaacacact 31632724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 444 - 502
Target Start/End: Original strand, 43791116 - 43791174
Alignment:
Q  444 ttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||| |||||||||||||||||||||||||| || ||||||||||| || ||||||||    
T  43791116 ttgagggaatgtaatgttttgagggaattcaaatactttgaggtgaactccattgtttg 43791174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 18789544 - 18789600
Alignment:
Q  445 tgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgttt 501  Q
    |||||||||||||||||  |||||||||||| || |||||||||||||| |||||||    
T  18789544 tgagagaatgtaatgttacgagggaattcaaatactttgaggtgaattccattgttt 18789600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 422 - 502
Target Start/End: Original strand, 30629061 - 30629141
Alignment:
Q  422 tgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||| |||||||||||||| ||||||| |||||| || ||||| || || |||| ||||||||  ||||||||    
T  30629061 tgtgtttggatgggggaatgttttgagggaatgtattgttttaagagaatttaaatactttggggtgaatttcattgtttg 30629141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 28539152 - 28539225
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| |||| |||| || || ||||||||||||||| ||||||||||| |||| ||| |||||||||||||||||    
T  28539152 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctc-aaaacattcccccatccaaacacact 28539225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 456 - 502
Target Start/End: Original strand, 32650611 - 32650657
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||||| || ||||||||||||| |||||||||    
T  32650611 aatgttttgagggaattcaaatactttgaggtgaattttattgtttg 32650657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 35776939 - 35777012
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| ||||||||| || || |||||||||| |||||||||||||||| |||| ||| || ||||||||||||||    
T  35776939 gaattcacctcaaagtatttgaattccctcataacattacattccctc-aaaacattccctcatccaaacacact 35777012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 456 - 502
Target Start/End: Original strand, 40495755 - 40495801
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||||| ||||||| ||||||||| ||||||||    
T  40495755 aatgttttgagggaattcaaatattttggggtgaattccattgtttg 40495801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 437 - 502
Target Start/End: Complemental strand, 3905699 - 3905634
Alignment:
Q  437 gaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||  ||  ||||||||| | ||||||||| || |||||||||||||||||||||||    
T  3905699 gaatgttttgaggaaaaataatgttttcaaggaattcaaatactttgaggtgaattctattgtttg 3905634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 523 - 576
Target Start/End: Original strand, 6498770 - 6498822
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||||||||||||||||||||||||| |||| ||| | |||||||||||||||    
T  6498770 aattccctcaaaacattacattccctc-aaaacattcctccatccaaacacact 6498822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 516
Target Start/End: Original strand, 31913256 - 31913316
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtg-aattctattgtttgaatccacctcaaaa 516  Q
    ||||||||||||||||||||||| ||| ||||| |||||||||||||||||  |||||||||    
T  31913256 aatgttttgagggaattcaacta-tttaaggtgaaattctattgtttgaatttacctcaaaa 31913316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 508 - 576
Target Start/End: Original strand, 34398938 - 34399006
Alignment:
Q  508 acctcaaaataattaaattc-cctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||||||| || || ||||| |||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  34398938 acctcaaagtagttgaattcacctcaaaacattacattccctc-aaaacattcccccatccaaacacact 34399006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 507 - 551
Target Start/End: Complemental strand, 43791160 - 43791116
Alignment:
Q  507 cacctcaaaataattaaattccctcaaaacattacattccctcaa 551  Q
    ||||||||| || || |||||||||||||||||||||||||||||    
T  43791160 cacctcaaagtatttgaattccctcaaaacattacattccctcaa 43791116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 456 - 502
Target Start/End: Original strand, 14790151 - 14790197
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||||| || ||||||||||||| |||| ||||    
T  14790151 aatgttttgagggaattcaaatactttgaggtgaattttattatttg 14790197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 29639199 - 29639272
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| |||||||||||| || |||| ||||| |||||||||||||||  |||| ||| ||||||||| |||||||    
T  29639199 gaattcacctcaaaatatttgaatttcctcataacattacattccct-gaaaacattcccccatccatacacact 29639272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 39342626 - 39342699
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| |||| |||| || || |||||||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  39342626 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctc-aaaacattcccccatccaaacacact 39342699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 456 - 502
Target Start/End: Original strand, 45984378 - 45984424
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||| ||||||||||| || |||||||||||||| ||||||||    
T  45984378 aatgttttaagggaattcaaatactttgaggtgaattcaattgtttg 45984424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 456 - 502
Target Start/End: Original strand, 45988738 - 45988784
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||| ||||||||||| || |||||||||||||| ||||||||    
T  45988738 aatgttttaagggaattcaaatactttgaggtgaattcaattgtttg 45988784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 523 - 576
Target Start/End: Original strand, 9784936 - 9784988
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||||||||||||| ||||||||||| |||| ||| | |||||||||||||||    
T  9784936 aattccctcaaaacaatacattccctc-aaaacattcctccatccaaacacact 9784988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 523 - 576
Target Start/End: Original strand, 14603267 - 14603319
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||||||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  14603267 aattcccttaaaacaatacattccctc-aaaacattcccccatccaaacacact 14603319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 448
Target Start/End: Complemental strand, 19865602 - 19865565
Alignment:
Q  411 ttctctaagagtgtgtttggatgtgggaatgttttgag 448  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  19865602 ttctctgagagtgtgtttggatgagggaatgttttgag 19865565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 465
Target Start/End: Original strand, 29195707 - 29195756
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttga 465  Q
    ||||||||||||||||||  ||||| |||||||  |||||||||||||||    
T  29195707 taagagtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 29195756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 448
Target Start/End: Complemental strand, 30080845 - 30080812
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgag 448  Q
    ||||||||||||||||||| ||||||||||||||    
T  30080845 ctaagagtgtgtttggatgggggaatgttttgag 30080812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 453
Target Start/End: Original strand, 31913234 - 31913271
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaat 453  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  31913234 taagagtgtgtttggatgggggaatgttttgagggaat 31913271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 523 - 576
Target Start/End: Complemental strand, 35455858 - 35455806
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||||||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  35455858 aattcccttaaaacaatacattccctc-aaaacattcccccatccaaacacact 35455806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 475
Target Start/End: Complemental strand, 22351922 - 22351874
Alignment:
Q  427 ttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaa 475  Q
    ||||||| |||||||||||| |  |||||||||||||||| ||||||||    
T  22351922 ttggatgggggaatgttttggggtaatgtaatgttttgagagaattcaa 22351874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 502 - 574
Target Start/End: Original strand, 23455231 - 23455302
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacaca 574  Q
    |||| |||| |||| || || ||||||||||||||| ||||||||||| |||| ||| || ||||||||||||    
T  23455231 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctc-aaaacattccctcatccaaacaca 23455302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 520 - 576
Target Start/End: Complemental strand, 29195766 - 29195711
Alignment:
Q  520 ttaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||||||  ||||||||||||||| |||| |||||||| | |||||||||||||||    
T  29195766 ttaaattctttcaaaacattacattacctc-aaaatattcctccatccaaacacact 29195711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 413 - 453
Target Start/End: Complemental strand, 30587949 - 30587909
Alignment:
Q  413 ctctaagagtgtgtttggatgtgggaatgttttgagagaat 453  Q
    ||||| ||||||||||||||| |||||||||||||| ||||    
T  30587949 ctctaggagtgtgtttggatgggggaatgttttgagggaat 30587909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 2e-54; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 420 - 576
Target Start/End: Original strand, 9763014 - 9763169
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 519  Q
    |||||||||||| | || ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  9763014 agtgtgtttggaaggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcacaataa 9763113  T
Q  520 ttaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    || |||||||||||||||||||||| |||| |||||||| | |||||||||||||||    
T  9763114 ttgaattccctcaaaacattacattacctc-aaaatattcctccatccaaacacact 9763169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 415 - 577
Target Start/End: Complemental strand, 6919869 - 6919709
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 514  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||| ||||  |||||||||||||||||||||| ||||||||    
T  6919869 ctaagagtgtgtttggatgggggaatgttttgagggaaagtaatgttttgagggaattcaaccattta-aggtgaattctattgtttgaattcacctcaa 6919771  T
Q  515 aataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacacta 577  Q
    | || || ||||||||||||||||||||||||||| |||  ||| | ||||||||||||||||    
T  6919770 agtagttgaattccctcaaaacattacattccctc-aaaccattcctccatccaaacacacta 6919709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 418 - 539
Target Start/End: Original strand, 9285647 - 9285768
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| || |||||| |    
T  9285647 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagctgaattctattgtttgaattcatctcaaagt 9285746  T
Q  518 aattaaattccctcaaaacatt 539  Q
    | || |||||||||||||||||    
T  9285747 agttgaattccctcaaaacatt 9285768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 415 - 576
Target Start/End: Complemental strand, 776242 - 776082
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 514  Q
    ||||||||||||||||||  |  ||||||||||| |||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||  | || ||    
T  776242 ctaagagtgtgtttggataggaaaatgttttgagggaatgtaatgttttgaggaaattcaactactttaaggtgaattctattgtttgaatttaacttaa 776143  T
Q  515 aataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    | || || |||| |||||||||||||||||||||| |||| ||||| ||||| |||||||||    
T  776142 agtagttgaatttcctcaaaacattacattccctc-aaaacatttctccatctaaacacact 776082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 416 - 579
Target Start/End: Complemental strand, 9763173 - 9763011
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 515  Q
    ||||||||||||||||||  ||||| |||||||  ||||||||||||||||||||||||| |||| ||||||| |||| |    | |||| |||||||||    
T  9763173 taagagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgagggaattcaattattgtgaggtggattcaaacaatagaattcacctcaaa 9763074  T
Q  516 ataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacactata 579  Q
     || || ||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||    
T  9763073 gtagttgaattccctcaaaacattacattccctc-aaaacatttccccttccaaacacactata 9763011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 420 - 576
Target Start/End: Original strand, 6919710 - 6919864
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 519  Q
    ||||||||||||||  |||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||| |    | |||| |||||  ||||      
T  6919710 agtgtgtttggatggaggaatggtttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcacct-taaatgg 6919808  T
Q  520 ttaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    || ||||||||||||||||||| ||||||| |||| ||| |||||||||||||||||    
T  6919809 ttgaattccctcaaaacattactttccctc-aaaacattcccccatccaaacacact 6919864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 418 - 502
Target Start/End: Original strand, 1368477 - 1368561
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||||  ||||||||||||||||||||||| |||| ||||||||||| | ||||||||||||||||||||||||    
T  1368477 agagtgtgtttggatggaggaatgttttgagagaatgtaatattttaagggaattcaaatgttttgaggtgaattctattgtttg 1368561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 456 - 576
Target Start/End: Complemental strand, 9285768 - 9285649
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaat 555  Q
    ||||||||||||||||||||||| |||||| ||||||| |    | |||| || |||||| || || ||||||||||||||||||||||||||| ||||     
T  9285768 aatgttttgagggaattcaactactttgagatgaattcaaacaatagaattcagctcaaagtagttgaattccctcaaaacattacattccctc-aaaac 9285670  T
Q  556 atttccccatccaaacacact 576  Q
    ||| |||||||||||||||||    
T  9285669 attcccccatccaaacacact 9285649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 418 - 502
Target Start/End: Complemental strand, 34245053 - 34244969
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| || ||||| || ||||| ||||||||    
T  34245053 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttgatgtaaattccattgtttg 34244969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 415 - 478
Target Start/End: Complemental strand, 8574827 - 8574764
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaacta 478  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||    
T  8574827 ctaagagtgtgtttggatggggaaatgttttgagtgaatgtaatgttttgagggaattcaacta 8574764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 415 - 502
Target Start/End: Original strand, 28918162 - 28918249
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||||  ||||||||||||| |||||||||||||| ||| ||||||| || |||||||||||||  ||||||||    
T  28918162 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttaaggaaattcaaatactttgaggtgaatttcattgtttg 28918249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 418 - 576
Target Start/End: Original strand, 776080 - 776237
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    ||||||||||| ||||  | ||||||||||| |||||||||||||||||| |||||||||| ||| || | ||||| |    | |||| ||||| ||| |    
T  776080 agagtgtgtttagatggagaaatgttttgagggaatgtaatgttttgaggaaattcaactactttaagttaaattcaaacaatagaattcaccttaaagt 776179  T
Q  518 aattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    | || |||| |||||||||||||||||||||| |||| |||| || |||||||||||||    
T  776180 agttgaatttcctcaaaacattacattccctc-aaaacattttcctatccaaacacact 776237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 422 - 492
Target Start/End: Complemental strand, 15299579 - 15299510
Alignment:
Q  422 tgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaatt 492  Q
    |||||||||||| |||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||    
T  15299579 tgtgtttggatg-gggaatgttttgagggaatgtaatgttttgaaggaattcaactactttgaggtgaatt 15299510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 418 - 478
Target Start/End: Original strand, 8574695 - 8574755
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaacta 478  Q
    |||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||    
T  8574695 agagtgtgtttggatggggaaatgttttgagtgaatgtaatgttttgagggaattcaacta 8574755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 418 - 502
Target Start/End: Original strand, 13487275 - 13487359
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||| |||| |||||||||||||| ||||||| |||| ||||||||||||| || |||||||||||||  ||||||||    
T  13487275 agagtgtgtttagatgggggaatgttttgagggaatgtagtgttatgagggaattcaaatactttgaggtgaatttcattgtttg 13487359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 418 - 502
Target Start/End: Complemental strand, 29889507 - 29889423
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||||| || ||||| |||||||| ||| ||||    
T  29889507 agagtgtgtttggatggaggaatgttttgatggaatgtaatgttttgagggaattcaaatactttgatgtgaattccattatttg 29889423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 436 - 490
Target Start/End: Original strand, 15299417 - 15299471
Alignment:
Q  436 ggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaa 490  Q
    ||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||    
T  15299417 ggaatgttttgagcgaatgtaatgttttgagagaattcaactactttgaggtgaa 15299471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 523 - 576
Target Start/End: Complemental strand, 8574749 - 8574697
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||||||||    
T  8574749 aattccctcaaaacattacattcactc-aaaacatttccccatccaaacacact 8574697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 523 - 576
Target Start/End: Original strand, 8574770 - 8574822
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||||||||    
T  8574770 aattccctcaaaacattacattcactc-aaaacatttccccatccaaacacact 8574822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 422 - 502
Target Start/End: Original strand, 15832470 - 15832550
Alignment:
Q  422 tgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||| || ||||||| ||  |||||||||||||| ||||||||||| || |||| ||||||||  ||||||||    
T  15832470 tgtgtttggatgaggtaatgtttcgaaggaatgtaatgttttaagggaattcaaatactttggggtgaatttcattgtttg 15832550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 440 - 505
Target Start/End: Complemental strand, 6358302 - 6358237
Alignment:
Q  440 tgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 505  Q
    |||||||||  |||||||||||||||| ||||| || || |||| |||||||||||||||| ||||    
T  6358302 tgttttgaggtaatgtaatgttttgagagaatttaaatactttgtggtgaattctattgttagaat 6358237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 523 - 576
Target Start/End: Original strand, 34244999 - 34245051
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||||||||||||||||||||||||| |||| ||| | |||||||||||||||    
T  34244999 aattccctcaaaacattacattccctc-aaaacattcctccatccaaacacact 34245051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 445 - 502
Target Start/End: Original strand, 34364770 - 34364827
Alignment:
Q  445 tgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||| |||||||||||| |||||||||| || || |||||||||||||| ||||||||    
T  34364770 tgagggaatgtaatgttatgagggaatttaaatactttgaggtgaattccattgtttg 34364827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 507 - 574
Target Start/End: Original strand, 15299514 - 15299579
Alignment:
Q  507 cacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacaca 574  Q
    ||||||||| || || |||||| ||||||||||||||||||||||||    |||||||||||||||||    
T  15299514 cacctcaaagtagttgaattccttcaaaacattacattccctcaaaa--cattccccatccaaacaca 15299579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 418 - 458
Target Start/End: Original strand, 33733432 - 33733472
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaat 458  Q
    |||||||||||||||| |||||||||||||| |||||||||    
T  33733432 agagtgtgtttggatgggggaatgttttgagggaatgtaat 33733472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 502 - 550
Target Start/End: Complemental strand, 34364818 - 34364770
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctca 550  Q
    |||| ||||||||| || ||||||||||||| |||||||||||||||||    
T  34364818 gaattcacctcaaagtatttaaattccctcataacattacattccctca 34364770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 447 - 478
Target Start/End: Original strand, 15299471 - 15299502
Alignment:
Q  447 agagaatgtaatgttttgagggaattcaacta 478  Q
    ||||||||||||||||||||||||||||||||    
T  15299471 agagaatgtaatgttttgagggaattcaacta 15299502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 463 - 502
Target Start/End: Complemental strand, 15616389 - 15616350
Alignment:
Q  463 tgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  15616389 tgagggaatttaaatattttgaggtgaattctattgtttg 15616350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 29889432 - 29889505
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| ||| ||||| || || |||||||||||||||||||||||| || |||| ||| | |||||||||||||||    
T  29889432 gaattcacatcaaagtatttgaattccctcaaaacattacattccatc-aaaacattcctccatccaaacacact 29889505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 448
Target Start/End: Original strand, 1195348 - 1195381
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgag 448  Q
    ||||||||||||||||||| ||||||||||||||    
T  1195348 ctaagagtgtgtttggatgggggaatgttttgag 1195381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 1195371 - 1195416
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgttt 501  Q
    |||||||||||||| ||||| || |||||||||||||| |||||||    
T  1195371 aatgttttgagggatttcaaatactttgaggtgaattccattgttt 1195416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 576
Target Start/End: Complemental strand, 13487345 - 13487277
Alignment:
Q  507 cacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||||||| || || |||||||||| |||| ||||||||||| |||| ||| ||||||| |||||||||    
T  13487345 cacctcaaagtatttgaattccctcataacactacattccctc-aaaacattcccccatctaaacacact 13487277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 576
Target Start/End: Complemental strand, 28918235 - 28918167
Alignment:
Q  507 cacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||||||| || || |||| ||| |||||||||||||||||| |||| ||| | |||||||||||||||    
T  28918235 cacctcaaagtatttgaatttccttaaaacattacattccctc-aaaacattcctccatccaaacacact 28918167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 4e-52; HSPs: 87)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 416 - 576
Target Start/End: Complemental strand, 15374121 - 15373962
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 515  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | | |||||||||||||||||||||| |||||||||    
T  15374121 taagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactctaaggtgaattctattgtttgaattcacctcaaa 15374022  T
Q  516 ataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
     || || |||||||||||||||||||||||||||||||| |||   |||||||||||||||    
T  15374021 gtagttgaattccctcaaaacattacattccctcaaaaa-attcttccatccaaacacact 15373962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 419 - 576
Target Start/End: Complemental strand, 20523291 - 20523135
Alignment:
Q  419 gagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaata 518  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||| ||    
T  20523291 gagtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagta 20523192  T
Q  519 attaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
     || |||||||||| || ||||||||||||| |||| |||  ||||||||||||||||    
T  20523191 gttgaattccctcagaatattacattccctc-aaaacattctcccatccaaacacact 20523135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 415 - 576
Target Start/End: Original strand, 9764335 - 9764495
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 514  Q
    ||||||||||||||||||| |||||| ||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||  ||||||||    
T  9764335 ctaagagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaa 9764434  T
Q  515 aataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    | || || |||||||||||||||||||||||||||  ||| ||| |||||||||||||||||    
T  9764435 agtagttgaattccctcaaaacattacattccctc-gaaacattcccccatccaaacacact 9764495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 416 - 553
Target Start/End: Original strand, 2316376 - 2316514
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaacta-ttttgaggtgaattctattgtttgaatccacctcaa 514  Q
    |||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||| |||  |||||||||||||||||||||| ||||||||    
T  2316376 taagagtgtgtttggatgggggaatgttttgagggaatgtaatattttgagggaattcaactactttaaaggtgaattctattgtttgaattcacctcaa 2316475  T
Q  515 aataattaaattccctcaaaacattacattccctcaaaa 553  Q
    | || || ||||| |||||||||||||||||||||||||    
T  2316476 agtagttgaattctctcaaaacattacattccctcaaaa 2316514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 420 - 554
Target Start/End: Original strand, 32389974 - 32390108
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 519  Q
    |||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||| | | |||||||||||||| ||||||| ||||||||| ||     
T  32389974 agtgtgtttggatgagggaatgttttgaaggaatgtaatattttgagggaattcaactactctaaggtgaattctattatttgaattcacctcaaagtag 32390073  T
Q  520 ttaaattccctcaaaacattacattccctcaaaaa 554  Q
    || ||||||||||||||||||||||||||||||||    
T  32390074 ttgaattccctcaaaacattacattccctcaaaaa 32390108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 418 - 576
Target Start/End: Complemental strand, 40809500 - 40809343
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    ||||||||||| |||| || ||||||||||||||||||||||||||||| ||||||| ||| ||| ||||||||| |||||||||||| || |||||| |    
T  40809500 agagtgtgtttagatggggaaatgttttgagagaatgtaatgttttgagtgaattcagctactttaaggtgaattttattgtttgaattcaactcaaagt 40809401  T
Q  518 aattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    | || |||||||||||||||||| |||| ||| |||| |||||||||||||||||||||    
T  40809400 agttgaattccctcaaaacattatattctctc-aaaacatttccccatccaaacacact 40809343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 415 - 576
Target Start/End: Original strand, 32470879 - 32471037
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 514  Q
    |||||||||| ||||||||  | ||||||||||| |||||||||||||||| |||||||||||||||| |||| ||||||||| ||||||| || |||||    
T  32470879 ctaagagtgtatttggatggagaaatgttttgagggaatgtaatgttttgaaggaattcaactattttaaggtaaattctattatttgaattcaactcaa 32470978  T
Q  515 aataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    | || || |||||||||||||||||||||||||||   || |||||| ||||||||||||||    
T  32470979 agtagttgaattccctcaaaacattacattccctc---aagatttccacatccaaacacact 32471037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 415 - 539
Target Start/End: Complemental strand, 40643979 - 40643856
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 514  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||  | |||||    
T  40643979 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaacta-tttaaggtgaattctattgtttgaatttaactcaa 40643881  T
Q  515 aataattaaattccctcaaaacatt 539  Q
    | || || |||||||||||||||||    
T  40643880 agtagttgaattccctcaaaacatt 40643856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 456 - 579
Target Start/End: Original strand, 28828387 - 28828507
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaat 555  Q
    ||||||||||||||||  || | |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||    
T  28828387 aatgttttgagggaatgtaa-tgttttgagg-gaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattacctc-aaaat 28828483  T
Q  556 atttccccatccaaacacactata 579  Q
    ||||||||||||||||||||||||    
T  28828484 atttccccatccaaacacactata 28828507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 418 - 576
Target Start/End: Complemental strand, 9764497 - 9764340
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    |||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||| |||||||||| ||| |    | |||| ||||| ||| |    
T  9764497 agagtgtgtttggatgggggaatgtttcgagggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagt 9764398  T
Q  518 aattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    | || ||||||||||||||||||| ||||||| |||||||| |||||||||||||||||    
T  9764397 agttgaattccctcaaaacattactttccctc-aaaatattcccccatccaaacacact 9764340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 421 - 576
Target Start/End: Complemental strand, 6634170 - 6634017
Alignment:
Q  421 gtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataat 520  Q
    ||||||||||||| |||||  ||| ||| ||||||||| |||| | ||| |||||||| |||||||||||||||||||||||||| || ||| |||||||    
T  6634170 gtgtgtttggatgggggaacatttcgagggaatgtaatattttaaaggagttcaactactttgaggtgaattctattgtttgaattca-ctcgaaataat 6634072  T
Q  521 taaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    | |||||||||||||||||||||| |||| |||||||  |||||||||||||||||    
T  6634071 tgaattccctcaaaacattacattacctc-aaaatatccccccatccaaacacact 6634017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 418 - 576
Target Start/End: Original strand, 15373960 - 15374117
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    ||||||||||||||||   |||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||| |    | |||| ||||| | | |    
T  15373960 agagtgtgtttggatggaagaattttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttagagt 15374059  T
Q  518 aattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    | || ||||||||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  15374060 agttgaattccctcaaaacattacattccctc-aaaacattcccccatccaaacacact 15374117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 418 - 576
Target Start/End: Original strand, 20523133 - 20523290
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    |||||||||||||||| | |||||||||||| ||||||||| || |||||||||||||||| |||||||||||||| |    | |||| ||||| ||| |    
T  20523133 agagtgtgtttggatgggagaatgttttgagggaatgtaatattctgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagt 20523232  T
Q  518 aattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    | || ||||||||||||||||||||||| ||| |||| ||| |||||||||||||||||    
T  20523233 agttgaattccctcaaaacattacattctctc-aaaacattcccccatccaaacacact 20523290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 413 - 576
Target Start/End: Complemental strand, 32390136 - 32389974
Alignment:
Q  413 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctc 512  Q
    ||||||||||||||||||||  | |||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||| | |  | |||| |||||     
T  32390136 ctctaagagtgtgtttggattagagaattttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaataatagaattcacctt 32390037  T
Q  513 aaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    | | || || ||||||||||||| |||||||||| || |||| ||| || ||||||||||||||    
T  32390036 agagtagttgaattccctcaaaatattacattccttc-aaaacattccctcatccaaacacact 32389974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 415 - 576
Target Start/End: Original strand, 40809338 - 40809498
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 514  Q
    ||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||| |||||| ||||||| |    |  ||| ||||| ||    
T  40809338 ctaagagtgtgtttggatggggaaatgttttgagagaatataatgttttgagggaattcaactactttgagttgaattcaaacaataaaattcaccttaa 40809437  T
Q  515 aataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    | ||  | ||||| ||||||||||||||||| ||| |||| ||||||||||| |||||||||    
T  40809438 agtagctgaattcactcaaaacattacattctctc-aaaacatttccccatctaaacacact 40809498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 418 - 576
Target Start/End: Complemental strand, 32471039 - 32470884
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    ||||||||||||||||||| ||| ||  ||| ||||||||||||||||||||||||||||| |||||| ||||||| | |  | ||||  |||| |||||    
T  32471039 agagtgtgtttggatgtggaaatctt--gagggaatgtaatgttttgagggaattcaactactttgagttgaattcaaataatagaatttaccttaaaat 32470942  T
Q  518 aattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    | || |||||| |||||||||||||||||||| |||| ||||| ||||||||| |||||    
T  32470941 agttgaattccttcaaaacattacattccctc-aaaacatttctccatccaaatacact 32470884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 419 - 505
Target Start/End: Original strand, 3563278 - 3563364
Alignment:
Q  419 gagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 505  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||    
T  3563278 gagtgtgtttggataggggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgcttgaat 3563364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 418 - 576
Target Start/End: Original strand, 23091963 - 23092119
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    ||||||||||| |||| |||||| ||||||| |||||||||||||||| |||||||||||| ||| || ||||||||||| | ||||| || || ||| |    
T  23091963 agagtgtgttttgatg-gggaatattttgagggaatgtaatgttttgaaggaattcaactactttaagttgaattctattttctgaattcatctgaaagt 23092061  T
Q  518 aattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    | || || ||||||||||||||||||||  || |||| ||| |||||||||||||||||    
T  23092062 agttgaactccctcaaaacattacattcgttc-aaaacattcccccatccaaacacact 23092119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 418 - 502
Target Start/End: Original strand, 22766952 - 22767036
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||| || ||| |||||||||||||||||||    
T  22766952 agagtgtgtttggatgggggaatgttttgagggaatataatgttttgagggaattcaaatactttaaggtgaattctattgtttg 22767036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 414 - 502
Target Start/End: Complemental strand, 25935364 - 25935276
Alignment:
Q  414 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||| ||||| ||||||| || |||||||||||||| ||||||||    
T  25935364 tctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgaggaaattcaaatactttgaggtgaattccattgtttg 25935276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 418 - 502
Target Start/End: Complemental strand, 37722964 - 37722880
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||| || |||||||||||||| ||||||||    
T  37722964 agagtgtgtttggatgggggaatattttgagggaatgtaatgttttgagggaattcaaatactttgaggtgaattccattgtttg 37722880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 414 - 502
Target Start/End: Complemental strand, 40090488 - 40090400
Alignment:
Q  414 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||||| ||||||||||||||  ||||||||||||||| ||||||||| || |||||||||||||| ||||||||    
T  40090488 tctaagagtgtgtttggatgggggaatgttttgaggaaatgtaatgttttgatggaattcaaatactttgaggtgaattccattgtttg 40090400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 418 - 576
Target Start/End: Complemental strand, 2316537 - 2316380
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacc-tcaaaa 516  Q
    |||||||||||||||| |  ||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||| |    | |||| |||| | |||     
T  2316537 agagtgtgtttggatg-gaaaatgttttgagggaatgtaatgttttgagagaattcaactactttgaggtgaattcaaacaatagaattcacctttaaag 2316439  T
Q  517 taattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    || || ||||||||||||| ||||||||||||| |||| ||| |||||||||||||||||    
T  2316438 tagttgaattccctcaaaatattacattccctc-aaaacattcccccatccaaacacact 2316380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 420 - 491
Target Start/End: Complemental strand, 2721628 - 2721557
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaat 491  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  2721628 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaat 2721557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 413 - 496
Target Start/End: Complemental strand, 16515182 - 16515099
Alignment:
Q  413 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctat 496  Q
    ||||||||||||||||||||| | ||||||||| || ||||||||||||||||||||||||||||  |||||||||||||||||    
T  16515182 ctctaagagtgtgtttggatgagagaatgtttttagggaatgtaatgttttgagggaattcaacttctttgaggtgaattctat 16515099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 418 - 495
Target Start/End: Complemental strand, 26281339 - 26281262
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattcta 495  Q
    |||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||    
T  26281339 agagtgtgtttggatgggggaacgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattcta 26281262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 414 - 502
Target Start/End: Original strand, 927298 - 927386
Alignment:
Q  414 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||||| || ||||||||||| ||||||| |||||||||||||||||| || |||| ||||||||| ||||||||    
T  927298 tctaagagtgtgtttggatggggaaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgtttg 927386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 416 - 576
Target Start/End: Complemental strand, 23092123 - 23091965
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 515  Q
    |||||||||||||||||| |||||||||||||  |||||||||||||||||||| |||||||| ||| || |||||||      | |||| || || |||    
T  23092123 taagagtgtgtttggatgggggaatgttttgaacgaatgtaatgttttgagggagttcaactactttcagatgaattcagaaaatagaattcaacttaaa 23092024  T
Q  516 ataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
     || || |||||| |||||||||||||||||||| |||||| ||||||||| |||||||||    
T  23092023 gtagttgaattccttcaaaacattacattccctc-aaaata-ttccccatcaaaacacact 23091965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 418 - 493
Target Start/End: Original strand, 15804322 - 15804397
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 493  Q
    |||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||    
T  15804322 agagtgtgtttggatgggggaatgttttgagggaatgtagtgttttgagggaattcaactactttgagttgaattc 15804397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 415 - 502
Target Start/End: Complemental strand, 41762288 - 41762201
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||| || |||| ||||||||| ||||||||    
T  41762288 ctaagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttg 41762201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 418 - 502
Target Start/End: Complemental strand, 22303940 - 22303856
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||| ||  ||||||||||||  ||||||||    
T  22303940 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaatttcattgtttg 22303856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 413 - 575
Target Start/End: Original strand, 6634010 - 6634170
Alignment:
Q  413 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctc 512  Q
    ||||||||||||||||||||| ||| || |||||||  ||||||||||||||||||||||||| ||||| || |||||||| |    | |||| ||||||    
T  6634010 ctctaagagtgtgtttggatggggggatattttgaggtaatgtaatgttttgagggaattcaattatttcga-gtgaattcaaacaatagaattcacctc 6634108  T
Q  513 aaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacac 575  Q
    ||| || || || ||| | |||| |||||||||||||  |||| || ||||||||||||||||    
T  6634109 aaagtagttgaactcctttaaaatattacattccctc-gaaatgttcccccatccaaacacac 6634170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 420 - 502
Target Start/End: Complemental strand, 19533975 - 19533893
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||  ||||||||||||| |||||||||||| ||||||||||||| || |||||||||||||  ||||||||    
T  19533975 agtgtgtttggatggaggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaatttcattgtttg 19533893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 416 - 502
Target Start/End: Complemental strand, 32250169 - 32250084
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||| ||  ||||| ||||||| ||||||||    
T  32250169 taagagtgtgtttggatg-gggaatgttttgagggaaagtaatgttttgagggaattcaaataccttgagatgaattccattgtttg 32250084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 422 - 502
Target Start/End: Complemental strand, 9894388 - 9894308
Alignment:
Q  422 tgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||| |||||||||||||| ||||||||||||   ||||||||||| || |||||||||||||| ||||||||    
T  9894388 tgtgtttggatgggggaatgttttgagggaatgtaatgttaccagggaattcaaatactttgaggtgaattccattgtttg 9894308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 418 - 498
Target Start/End: Original strand, 35379344 - 35379423
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattg 498  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |  ||||| ||||||| |||||    
T  35379344 agagtgtgtttggatg-gggaatgttttgagataatgtaatgttttgagggaattcaaattctttgaagtgaattttattg 35379423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 420 - 502
Target Start/End: Complemental strand, 37145569 - 37145487
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||| ||||||||| |||||||||||||| |||||||||||| |||| |||||||| || |||||||||||||  ||||||||    
T  37145569 agtgggtttggatgggggaatgttttgagggaatgtaatgttatgagagaattcaaatactttgaggtgaatttcattgtttg 37145487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 37722889 - 37722962
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| ||||||||| || || ||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  37722889 gaattcacctcaaagtatttgaattccctcaaaacattacattccctc-aaaatattcccccatccaaacacact 37722962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 422 - 495
Target Start/End: Original strand, 16515009 - 16515081
Alignment:
Q  422 tgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattcta 495  Q
    |||||||||||| | |||||||||||| |||||||| |||||||||||||||||||  ||||||||||||||||    
T  16515009 tgtgtttggatg-gagaatgttttgagggaatgtaaggttttgagggaattcaacttctttgaggtgaattcta 16515081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 420 - 473
Target Start/End: Original strand, 28828369 - 28828422
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattc 473  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  28828369 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 28828422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 420 - 493
Target Start/End: Complemental strand, 28828504 - 28828431
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 493  Q
    |||||||||||||| || ||| |||||||  ||||||||||||||||||||||||| |||||||||||| ||||    
T  28828504 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattc 28828431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 522 - 578
Target Start/End: Original strand, 15804398 - 15804453
Alignment:
Q  522 aaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacactat 578  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  15804398 aaattccctcaaaacattacattccctc-aaaacatttccccatccaaacacactat 15804453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 415 - 491
Target Start/End: Original strand, 34982213 - 34982288
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaat 491  Q
    ||||||||||||||||||  |||||||||||||| |||||| |||||||||||||||||||| | ||| ||||||||    
T  34982213 ctaagagtgtgtttggataggggaatgttttgagggaatgt-atgttttgagggaattcaaccactttaaggtgaat 34982288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 456 - 576
Target Start/End: Original strand, 40643856 - 40643974
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaat 555  Q
    ||||||||||||||||||||||| |||||| | ||||| |    | |||| ||||| ||| || || ||||||||||||||||||||||||||| ||||     
T  40643856 aatgttttgagggaattcaactactttgagttaaattcaaacaatagaattcaccttaaa-tagttgaattccctcaaaacattacattccctc-aaaac 40643953  T
Q  556 atttccccatccaaacacact 576  Q
    ||| |||||||||||||||||    
T  40643954 attcccccatccaaacacact 40643974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 507 - 578
Target Start/End: Original strand, 2721560 - 2721630
Alignment:
Q  507 cacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacactat 578  Q
    ||||||||| || || ||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||    
T  2721560 cacctcaaagtagttgaattccctcaaaacattacattccctc-aaaacattcccccatccaaacacactat 2721630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 415 - 502
Target Start/End: Original strand, 10314646 - 10314733
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||| ||||||||||  | ||||||||||   |||||||| |||| ||||||||||| |||||||| |||||||||||||||||    
T  10314646 ctaagagtatgtttggatggagaaatgttttgaagaaatgtaatattttaagggaattcaaatattttgatgtgaattctattgtttg 10314733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 419 - 494
Target Start/End: Complemental strand, 33245441 - 33245366
Alignment:
Q  419 gagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattct 494  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||||  |||||||||| ||| || ||||||||    
T  33245441 gagtgtgtttggatgggggaatgttttgatggaatgtaatgttttgagaaaattcaactactttaagttgaattct 33245366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 415 - 473
Target Start/End: Original strand, 13243454 - 13243514
Alignment:
Q  415 ctaagagtgtgtttg--gatgtgggaatgttttgagagaatgtaatgttttgagggaattc 473  Q
    |||||||||||||||  |||| |||||||||||||| ||||||||||||||||||||||||    
T  13243454 ctaagagtgtgtttgtggatgagggaatgttttgagggaatgtaatgttttgagggaattc 13243514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 411 - 472
Target Start/End: Complemental strand, 15804460 - 15804399
Alignment:
Q  411 ttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaatt 472  Q
    |||||| | |||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  15804460 ttctctcatagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaatt 15804399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 484 - 553
Target Start/End: Complemental strand, 16515097 - 16515028
Alignment:
Q  484 aggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaa 553  Q
    ||||||||||||||||| |||| |||||||||  | || |||||||||||||| ||||||||||||||||    
T  16515097 aggtgaattctattgttagaattcacctcaaagaagttgaattccctcaaaaccttacattccctcaaaa 16515028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 502 - 576
Target Start/End: Complemental strand, 927377 - 927304
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| |||| |||| || || ||||||||||||||| ||||||||||| |||| |||||||||||||||||||||    
T  927377 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctc-aaaacatttccccatccaaacacact 927304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 420 - 502
Target Start/End: Original strand, 14834826 - 14834908
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||| ||| | |||||||| ||| |||||||||||||| ||||||| ||| || |||||||||||||  ||||||||    
T  14834826 agtgtgtttgcatgggagaatgtttcgagggaatgtaatgttttaagggaatccaaatactttgaggtgaatttcattgtttg 14834908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 456 - 502
Target Start/End: Original strand, 22305132 - 22305178
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  22305132 aatgttttgagggaattcaactactttgaggtgaattccattgtttg 22305178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 456 - 505
Target Start/End: Complemental strand, 15270886 - 15270837
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 505  Q
    |||||||||||||||||||| || |||||||||||||| |||||||||||    
T  15270886 aatgttttgagggaattcaaatactttgaggtgaattccattgtttgaat 15270837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 499 - 576
Target Start/End: Complemental strand, 15804400 - 15804324
Alignment:
Q  499 tttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||||| || |||||| || || ||||||||||||||| ||||||||||| |||| ||| |||||||||||||||||    
T  15804400 tttgaattcaactcaaagtagttgaattccctcaaaacactacattccctc-aaaacattcccccatccaaacacact 15804324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 456 - 505
Target Start/End: Complemental strand, 17542393 - 17542344
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 505  Q
    |||||||||||||||||||| || |||||||||||||| |||||||||||    
T  17542393 aatgttttgagggaattcaaatactttgaggtgaattccattgtttgaat 17542344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 523 - 576
Target Start/End: Complemental strand, 28828421 - 28828369
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||||||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  28828421 aattccctcaaaacattacattccctc-aaaacattcccccatccaaacacact 28828369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 507 - 579
Target Start/End: Original strand, 19533907 - 19533978
Alignment:
Q  507 cacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacactata 579  Q
    ||||||||| || || |||||||||| |||||||||||||||| |||| ||| | ||||||||||||||||||    
T  19533907 cacctcaaagtatttgaattccctcataacattacattccctc-aaaacattcctccatccaaacacactata 19533978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 450 - 502
Target Start/End: Original strand, 35111258 - 35111310
Alignment:
Q  450 gaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||| ||||||||| |||||||| |||| ||||||||||||    
T  35111258 gaatgtaatgttttgaaggaattcaaatattttgatgtgagttctattgtttg 35111310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 528 - 579
Target Start/End: Original strand, 13243514 - 13243564
Alignment:
Q  528 cctcaaaacattacattccctcaaaaatatttccccatccaaacacactata 579  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  13243514 cctcaaaacattacattacctcaaaa-tattcccccatccaaacacactata 13243564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 576
Target Start/End: Complemental strand, 3563352 - 3563279
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| ||||| ||| || || ||||||||||||||||||||||||||| |||| ||| ||| |||||||||||||    
T  3563352 gaattcaccttaaagtagttgaattccctcaaaacattacattccctc-aaaacattcccctatccaaacacact 3563279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 502
Target Start/End: Complemental strand, 20320716 - 20320634
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||   |||||||||||  ||||||||| |||| ||||||||||| || ||||  |||||||| ||||||||    
T  20320716 agtgtgtttggatgaatgaatgttttgaaggaatgtaatattttaagggaattcaaatactttggtgtgaattccattgtttg 20320634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 453
Target Start/End: Original strand, 22305105 - 22305147
Alignment:
Q  411 ttctctaagagtgtgtttggatgtgggaatgttttgagagaat 453  Q
    ||||||||||||||||||||||| |||||||||||||| ||||    
T  22305105 ttctctaagagtgtgtttggatgggggaatgttttgagggaat 22305147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 576
Target Start/End: Complemental strand, 22767027 - 22766954
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| ||||| ||| || || |||||||||||||||||| |||||||| |||| ||| |||||||||||||||||    
T  22767027 gaattcaccttaaagtatttgaattccctcaaaacattatattccctc-aaaacattcccccatccaaacacact 22766954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 25935285 - 25935358
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| ||||||||| || || |||| ||||| |||||||||||||||| |||| ||| |||||||||||||||||    
T  25935285 gaattcacctcaaagtatttgaatttcctcataacattacattccctc-aaaacattcccccatccaaacacact 25935358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 26281264 - 26281337
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| ||||| ||| || || ||||||||||||||||||||||||||| ||||  || |||||||||||||||||    
T  26281264 gaattcaccttaaagtagttgaattccctcaaaacattacattccctc-aaaacgttcccccatccaaacacact 26281337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 456 - 502
Target Start/End: Original strand, 33146211 - 33146257
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||||| || |||||||||||||| ||||||||    
T  33146211 aatgttttgagggaattcaaatactttgaggtgaattccattgtttg 33146257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 40090409 - 40090482
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| ||||||||| || || |||||| ||||||||||||||| |||| |||| ||| |||||||||||||||||    
T  40090409 gaattcacctcaaagtatttgaattccatcaaaacattacatttcctc-aaaacattcccccatccaaacacact 40090482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 457 - 502
Target Start/End: Complemental strand, 17492679 - 17492634
Alignment:
Q  457 atgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||||||| || |||||||||||||| ||||||||    
T  17492679 atgttttgagggaattcaaataatttgaggtgaattccattgtttg 17492634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 523 - 576
Target Start/End: Original strand, 22303886 - 22303938
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||||| |||||||||||||||||||| |||| ||| |||||||||||||||||    
T  22303886 aattccttcaaaacattacattccctc-aaaacattcccccatccaaacacact 22303938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 457 - 502
Target Start/End: Original strand, 28490031 - 28490076
Alignment:
Q  457 atgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||||||| || |||||||||||||| ||||||||    
T  28490031 atgttttgagggaattcaaatactttgaggtgaattccattgtttg 28490076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 492
Target Start/End: Original strand, 2550348 - 2550384
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaatt 492  Q
    ||||||||||||||||||||||| |||||||||||||    
T  2550348 aatgttttgagggaattcaactactttgaggtgaatt 2550384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 415 - 463
Target Start/End: Original strand, 5658773 - 5658821
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgtttt 463  Q
    |||||||||||||||||||  | ||||||||||| ||||||||||||||    
T  5658773 ctaagagtgtgtttggatggagaaatgttttgagggaatgtaatgtttt 5658821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 451 - 502
Target Start/End: Original strand, 8255060 - 8255110
Alignment:
Q  451 aatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||||||||||||| |||||| |||||||||  ||||||||    
T  8255060 aatgtaatgttttgagggaattcaaatatttt-aggtgaatttcattgtttg 8255110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 420 - 467
Target Start/End: Complemental strand, 13243561 - 13243514
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagg 467  Q
    |||||||||||||| |||||| |||||||  |||||||||||||||||    
T  13243561 agtgtgtttggatgggggaatattttgaggtaatgtaatgttttgagg 13243514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 419 - 502
Target Start/End: Original strand, 37090282 - 37090365
Alignment:
Q  419 gagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||    ||||||||||||  ||||  ||||||||||| ||||||| |||||| | |||||||| ||||||||    
T  37090282 gagtgtgtttggatagaagaatgttttgaggtaatgcgatgttttgaggaaattcaaatatttttatgtgaattccattgtttg 37090365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 415 - 453
Target Start/End: Original strand, 2550325 - 2550363
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaat 453  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  2550325 ctaagagtgtgtttggatgggggaatgttttgagggaat 2550363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 523 - 553
Target Start/End: Complemental strand, 13243513 - 13243483
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaa 553  Q
    |||||||||||||||||||||||||||||||    
T  13243513 aattccctcaaaacattacattccctcaaaa 13243483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 16515102 - 16515175
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| |||||||||  | || |||||||||||||||||||||||||| ||||| |||  | ||||||||||||||    
T  16515102 gaattcacctcaaagaagttgaattccctcaaaacattacattccct-aaaaacattctctcatccaaacacact 16515175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 450 - 492
Target Start/End: Original strand, 30519036 - 30519078
Alignment:
Q  450 gaatgtaatgttttgagggaattcaactattttgaggtgaatt 492  Q
    |||||||||||| ||||||||||||| ||||||| ||||||||    
T  30519036 gaatgtaatgttatgagggaattcaaatattttgcggtgaatt 30519078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 450 - 492
Target Start/End: Original strand, 30559376 - 30559418
Alignment:
Q  450 gaatgtaatgttttgagggaattcaactattttgaggtgaatt 492  Q
    |||||||||||| ||||||||||||| ||||||| ||||||||    
T  30559376 gaatgtaatgttatgagggaattcaaatattttgcggtgaatt 30559418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 523 - 576
Target Start/End: Original strand, 32250114 - 32250165
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||||||||||||||||| |||||||||||    |||||||||||||||||||    
T  32250114 aattccctcaaaacattactttccctcaaaa--cattccccatccaaacacact 32250165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 450 - 492
Target Start/End: Complemental strand, 37241640 - 37241598
Alignment:
Q  450 gaatgtaatgttttgagggaattcaactattttgaggtgaatt 492  Q
    |||||||||||||||||||||||||| || |||||| ||||||    
T  37241640 gaatgtaatgttttgagggaattcaaatactttgagctgaatt 37241598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 41762210 - 41762283
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| |||| |||| || || |||||||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  41762210 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctc-aaaacattcccccatccaaacacact 41762283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 576
Target Start/End: Original strand, 37145501 - 37145569
Alignment:
Q  507 cacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||||||| || || ||||| |||| |||||||||||||||| |||| ||| |||||||||||| ||||    
T  37145501 cacctcaaagtatttgaattctctcataacattacattccctc-aaaacattcccccatccaaacccact 37145569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 532 - 576
Target Start/End: Complemental strand, 5658821 - 5658778
Alignment:
Q  532 aaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||||||||||||||||| |||| ||||| |||||||||||||||    
T  5658821 aaaacattacattccctc-aaaacatttctccatccaaacacact 5658778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 502 - 574
Target Start/End: Original strand, 9894317 - 9894388
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacaca 574  Q
    |||| ||||||||| || || ||||||||   |||||||||||||||| |||| ||| |||||||||||||||    
T  9894317 gaattcacctcaaagtatttgaattccctggtaacattacattccctc-aaaacattcccccatccaaacaca 9894388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 2e-51; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 426 - 553
Target Start/End: Original strand, 31070415 - 31070541
Alignment:
Q  426 tttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaat 525  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  31070415 tttggatg-gggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaataattgaat 31070513  T
Q  526 tccctcaaaacattacattccctcaaaa 553  Q
    ||||||||||||||||||| ||||||||    
T  31070514 tccctcaaaacattacattacctcaaaa 31070541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 418 - 576
Target Start/End: Original strand, 44692822 - 44692979
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    |||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||| | ||| |||||||||||||||||||||| ||||||||| |    
T  44692822 agagtgtgtttggatgggggaatgttttgagggaaagtaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagt 44692921  T
Q  518 aattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    | || ||||||||||||||||||||||||||| |||| ||| | |||||||||||||||    
T  44692922 agttgaattccctcaaaacattacattccctc-aaaacattcctccatccaaacacact 44692979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 415 - 544
Target Start/End: Original strand, 44436255 - 44436384
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 514  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||    
T  44436255 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactattttaaggtgaattctattgtttgaattcacctcaa 44436354  T
Q  515 aataattaaattccctcaaaacattacatt 544  Q
    | || || ||||||||||||||||||||||    
T  44436355 agtagttgaattccctcaaaacattacatt 44436384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 416 - 576
Target Start/End: Original strand, 9129342 - 9129501
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 515  Q
    |||||||||||||||||| | || | ||||||| |||||||||||||||| |||||||||||| ||| || ||||||||||||||||||| |||||||||    
T  9129342 taagagtgtgtttggatgggagactattttgagggaatgtaatgttttgatggaattcaactactttaagttgaattctattgtttgaattcacctcaaa 9129441  T
Q  516 ataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
     || || ||||||||||||||||||||||||||| |||| ||| || ||||||||||||||    
T  9129442 gtagttgaattccctcaaaacattacattccctc-aaaacattccctcatccaaacacact 9129501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 416 - 576
Target Start/End: Original strand, 9137449 - 9137608
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 515  Q
    |||||||||||||||||| | || | ||||||| |||||||||||||||| |||||||||||| ||| || ||||||||||||||||||| |||||||||    
T  9137449 taagagtgtgtttggatgggagactattttgagggaatgtaatgttttgatggaattcaactactttaagttgaattctattgtttgaattcacctcaaa 9137548  T
Q  516 ataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
     || || ||||||||||||||||||||||||||| |||| ||| || ||||||||||||||    
T  9137549 gtagttgaattccctcaaaacattacattccctc-aaaacattccctcatccaaacacact 9137608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 418 - 576
Target Start/End: Complemental strand, 5415942 - 5415785
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    |||||||||||||||| |||||| ||||||| ||| |||||||||||| |||||||||||| ||| ||||||||||||||||||| |  ||||| ||| |    
T  5415942 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttgatggaattcaactactttaaggtgaattctattgtttgtactcaccttaaagt 5415843  T
Q  518 aattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    | || ||||||||||||||||||||||||||| |||||||| ||| |||||||||||||    
T  5415842 agttgaattccctcaaaacattacattccctc-aaaatattcccctatccaaacacact 5415785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 456 - 576
Target Start/End: Original strand, 46429434 - 46429553
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaat 555  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||| |||||    
T  46429434 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaatccacctcaaaataattgaattccttcaaaacattacattacctc-aaaat 46429532  T
Q  556 atttccccatccaaacacact 576  Q
    ||| || ||||||||||||||    
T  46429533 attccctcatccaaacacact 46429553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 415 - 576
Target Start/End: Complemental strand, 44692984 - 44692824
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 514  Q
    |||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |    | |||| ||||| ||    
T  44692984 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaa 44692885  T
Q  515 aataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    | |  || ||||||||||||||||||| ||||||| |||| ||| |||||||||||||||||    
T  44692884 agtggttgaattccctcaaaacattactttccctc-aaaacattcccccatccaaacacact 44692824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 416 - 576
Target Start/End: Complemental strand, 9129505 - 9129346
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 515  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |    | |||| || || |||    
T  9129505 taagagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaa 9129406  T
Q  516 ataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
     || || |||||| |||||||||||||||||||| |||||| |  ||||||||||||||||    
T  9129405 gtagttgaattccatcaaaacattacattccctc-aaaatagtctcccatccaaacacact 9129346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 416 - 576
Target Start/End: Complemental strand, 9137612 - 9137453
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 515  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |    | |||| || || |||    
T  9137612 taagagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaa 9137513  T
Q  516 ataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
     || || |||||| |||||||||||||||||||| |||||| |  ||||||||||||||||    
T  9137512 gtagttgaattccatcaaaacattacattccctc-aaaatagtctcccatccaaacacact 9137453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 456 - 572
Target Start/End: Complemental strand, 28092335 - 28092220
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaat 555  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||| ||||| |||| ||||     
T  28092335 aatgttttgagggaattcaactgttttgaggtgaattctattgtttgaattcacctcaaagtaattgaattccctcaaaacatcacatttcctc-aaaac 28092237  T
Q  556 atttccccatccaaaca 572  Q
    ||| |||||||||||||    
T  28092236 attcccccatccaaaca 28092220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 460 - 576
Target Start/End: Original strand, 47284268 - 47284383
Alignment:
Q  460 ttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatattt 559  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||| ||||||||     
T  47284268 ttttgagggaattcagctactttgaggtgaattctattgtttgaatcaacctcaaaataattgaattccctcaaaacattacattacctc-aaaatattc 47284366  T
Q  560 ccccatccaaacacact 576  Q
     | ||||||||||||||    
T  47284367 tctcatccaaacacact 47284383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 456 - 576
Target Start/End: Original strand, 27251932 - 27252051
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaat 555  Q
    |||||||| |||||||||||||| ||| || ||||||||||||||||||| ||||||||| || || ||||||||||||||||||||||||||| ||||     
T  27251932 aatgttttaagggaattcaactactttaagttgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctc-aaaac 27252030  T
Q  556 atttccccatccaaacacact 576  Q
    ||  |||||||||||||||||    
T  27252031 atccccccatccaaacacact 27252051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 450 - 578
Target Start/End: Complemental strand, 42130819 - 42130692
Alignment:
Q  450 gaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctc 549  Q
    ||||||||| |||| ||||||||||| || |||||||||||||||| | ||||||||||| | || |||||| |||||||||||||||||||||  ||||    
T  42130819 gaatgtaatctttttagggaattcaattactttgaggtgaattctactctttgaatccacttaaagataattgaattccctcaaaacattacatcacctc 42130720  T
Q  550 aaaaatatttccccatccaaacacactat 578  Q
     |||||||| ||||| |||||||||||||    
T  42130719 -aaaatattcccccacccaaacacactat 42130692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 418 - 494
Target Start/End: Complemental strand, 46672875 - 46672799
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattct 494  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  46672875 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattct 46672799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 417 - 576
Target Start/End: Original strand, 5415782 - 5415940
Alignment:
Q  417 aagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaa 516  Q
    ||||||||||||||||  |||||| ||||||| ||||||||||||||||||||||||||||| ||| |||||| | | |    | |||| ||||| |||     
T  5415782 aagagtgtgtttggataggggaatattttgagggaatgtaatgttttgagggaattcaactactttaaggtgagtacaaacaatagaattcaccttaaag 5415881  T
Q  517 taattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    || || |||||| |||||||||||| ||||||| |||||||| |||||||||||||||||    
T  5415882 tagttgaattccatcaaaacattactttccctc-aaaatattcccccatccaaacacact 5415940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 460 - 579
Target Start/End: Original strand, 39215880 - 39215998
Alignment:
Q  460 ttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatattt 559  Q
    |||| ||||||||||| || ||||||||||||| |||||||||||||||||||||||||||| ||||  |||||||||||| ||| |||| ||||||||     
T  39215880 tttttagggaattcaattactttgaggtgaattttattgtttgaatccacctcaaaataattgaattttctcaaaacattatattacctc-aaaatattc 39215978  T
Q  560 ccccatccaaacacactata 579  Q
     | |||||||||||||||||    
T  39215979 tctcatccaaacacactata 39215998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 415 - 498
Target Start/End: Original strand, 49457340 - 49457423
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattg 498  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||| |||||||||||||||    
T  49457340 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaaccactttaaggtgaattctattg 49457423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 415 - 493
Target Start/End: Complemental strand, 27252056 - 27251978
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 493  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  27252056 ctaagagtgtgtttggatggggggatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattc 27251978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 451 - 576
Target Start/End: Complemental strand, 44436384 - 44436260
Alignment:
Q  451 aatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctca 550  Q
    |||||||||||||||||||||||||||| |||||||||||||| |    | |||| ||||| |||||| || |||| ||||||||||||||||||||||     
T  44436384 aatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaaatagttgaatttcctcaaaacattacattccctc- 44436286  T
Q  551 aaaatatttccccatccaaacacact 576  Q
    |||| ||| |||||||||||||||||    
T  44436285 aaaacattcccccatccaaacacact 44436260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 416 - 502
Target Start/End: Original strand, 7302344 - 7302430
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||  ||  ||||||||||||| ||||||||    
T  7302344 taagagtgtgtttggatgagggaatgttttgagagaatgtaatgttttgaaggaattcagataccttgaggtgaattccattgtttg 7302430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 422 - 502
Target Start/End: Complemental strand, 21307600 - 21307520
Alignment:
Q  422 tgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||| |||||||||||| | |||||||||||||||||||||||||| || |||||||||||||| ||||||||    
T  21307600 tgtgtttggatgggggaatgttttgcgggaatgtaatgttttgagggaattcaaatactttgaggtgaattccattgtttg 21307520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 411 - 539
Target Start/End: Original strand, 28092207 - 28092335
Alignment:
Q  411 ttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacc 510  Q
    |||||| ||||| |||||||||| ||||||||||||||  ||||| ||||||||||||||||||| || |||||||||||||| |    | |||| ||||    
T  28092207 ttctcttagagtatgtttggatgggggaatgttttgaggaaatgtgatgttttgagggaattcaattactttgaggtgaattcaaacaatagaattcacc 28092306  T
Q  511 tcaaaataattaaattccctcaaaacatt 539  Q
    |||||| | || |||||||||||||||||    
T  28092307 tcaaaacagttgaattccctcaaaacatt 28092335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 437 - 553
Target Start/End: Complemental strand, 31070546 - 31070430
Alignment:
Q  437 gaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaac 536  Q
    |||| |||||||  ||||||||||||||||||||||||| |||||||||||| |||| |    | |||| ||||||||| || || ||||||||||||||    
T  31070546 gaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaac 31070447  T
Q  537 attacattccctcaaaa 553  Q
    |||||||||||||||||    
T  31070446 attacattccctcaaaa 31070430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 414 - 502
Target Start/End: Complemental strand, 53129919 - 53129831
Alignment:
Q  414 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||||||| |||||||||| ||| |||||||||||||| ||||||||||| || |||| ||||||||| ||||||||    
T  53129919 tctaagagtgtgtttggatgagggaatgtttcgagggaatgtaatgttttaagggaattcaaatactttggggtgaattccattgtttg 53129831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 418 - 500
Target Start/End: Complemental strand, 36398061 - 36397979
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtt 500  Q
    |||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||| || |||| ||||||||| ||||||    
T  36398061 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgtt 36397979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 456 - 539
Target Start/End: Complemental strand, 332096 - 332012
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattg-tttgaatccacctcaaaataattaaattccctcaaaacatt 539  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| ||||||| ||||||||| || || |||||||||||||||||    
T  332096 aatgttttgagggaattcaactactttaaggtgaattctattgttttgaattcacctcaaagtagttgaattccctcaaaacatt 332012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 415 - 515
Target Start/End: Original strand, 40929605 - 40929704
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 514  Q
    ||||||||||||||||||| ||||||||||| ||||||| |||||||  |||  |||||||||||||| |  ||||||||||||||||||| ||||||||    
T  40929605 ctaagagtgtgtttggatg-gggaatgttttcagagaatataatgttcggagaaaattcaactattttaatatgaattctattgtttgaattcacctcaa 40929703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 418 - 502
Target Start/End: Original strand, 47767432 - 47767516
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||| ||  ||||||||||||  ||||||||    
T  47767432 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattacattgtttg 47767516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 415 - 502
Target Start/End: Complemental strand, 42006028 - 42005941
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||| || ||  ||||||||||||  ||||||||    
T  42006028 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaatttaaataccttgaggtgaatttcattgtttg 42005941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 415 - 500
Target Start/End: Original strand, 34088568 - 34088653
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtt 500  Q
    |||||||||||||||||||  | ||||||||||| ||||||| |||||||||||||||||| || |||| ||||||||| ||||||    
T  34088568 ctaagagtgtgtttggatggagaaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgtt 34088653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 418 - 539
Target Start/End: Complemental strand, 46429555 - 46429434
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 517  Q
    |||||||||||||||| |||||| |||||||  ||||||||||||||| ||||||||| |||||||||||| |||| |    | |||| ||||| ||| |    
T  46429555 agagtgtgtttggatgagggaatattttgaggtaatgtaatgttttgaaggaattcaattattttgaggtggattcaaacaatagaattcaccttaaagt 46429456  T
Q  518 aattaaattccctcaaaacatt 539  Q
    | || |||||||||||||||||    
T  46429455 agttgaattccctcaaaacatt 46429434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 414 - 502
Target Start/End: Complemental strand, 671695 - 671607
Alignment:
Q  414 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||| |||||||  |||||||||||||| ||||||| |||||||||||||||||  || |||| ||||||||| ||||||||    
T  671695 tctaagagtgtttttggataggggaatgttttgagggaatgtattgttttgagggaattcagatactttggggtgaattccattgtttg 671607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 418 - 502
Target Start/End: Original strand, 37054394 - 37054478
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||| ||||||||||| || |||||||||||||||| ||||||||| ||  ||||||||||||  ||||||||    
T  37054394 agagtgtgtttggatgggggaatgttttaagggaatgtaatgttttgaaggaattcaaataccttgaggtgaatttcattgtttg 37054478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 418 - 493
Target Start/End: Original strand, 39110394 - 39110469
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 493  Q
    ||||||||||||||||  | ||||||||||| ||||||||||||||| ||||||||||||| |||||| |||||||    
T  39110394 agagtgtgtttggatgaagaaatgttttgagcgaatgtaatgttttgtgggaattcaactactttgagttgaattc 39110469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 466 - 576
Target Start/End: Original strand, 46672770 - 46672873
Alignment:
Q  466 gggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccat 565  Q
    ||||||||||||| |||||||||||||| |      |||| ||||||||| || || ||||||||||||||||||||||||||| |||| ||| ||||||    
T  46672770 gggaattcaactactttgaggtgaattcaa------gaattcacctcaaagtagttgaattccctcaaaacattacattccctc-aaaacattcccccat 46672862  T
Q  566 ccaaacacact 576  Q
    |||||||||||    
T  46672863 ccaaacacact 46672873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 418 - 487
Target Start/End: Complemental strand, 47284385 - 47284316
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggt 487  Q
    |||||||||||||||| | |||| |||||||  ||||||||||||||||||||||||| |||||||||||    
T  47284385 agagtgtgtttggatgagagaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggt 47284316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 426 - 502
Target Start/End: Original strand, 19475824 - 19475900
Alignment:
Q  426 tttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||  ||||||||||||| |||||||||||| ||||| ||||||| || |||||||||||||| ||||||||    
T  19475824 tttggatggaggaatgttttgagggaatgtaatgttatgaggtaattcaaatactttgaggtgaattccattgtttg 19475900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 418 - 502
Target Start/End: Original strand, 48947605 - 48947689
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||||   |||||||||||| ||||||| ||||||||| |||||||| || |||| ||||||||| ||||||||    
T  48947605 agagtgtgtttggatggaagaatgttttgagggaatgtattgttttgagagaattcaaatactttggggtgaattccattgtttg 48947689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 418 - 502
Target Start/End: Complemental strand, 53470501 - 53470417
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||| || ||||||||||| |||| || |||||||||||||||||| || |||| ||||||||  ||||||||    
T  53470501 agagtgtgtttggatgaggaaatgttttgagggaatctattgttttgagggaattcaaatactttggggtgaatttcattgtttg 53470417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 456 - 539
Target Start/End: Complemental strand, 25655418 - 25655335
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacatt 539  Q
    |||||||||| |||||||||||| ||| || ||||||||||| ||||||| || |||||| || || |||||||||||||||||    
T  25655418 aatgttttgacggaattcaactactttaagttgaattctattatttgaattcaactcaaagtagttgaattccctcaaaacatt 25655335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 436 - 502
Target Start/End: Original strand, 30766571 - 30766637
Alignment:
Q  436 ggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||| |||||||||||||||| ||||||||| ||  ||||||||||||| ||||||||    
T  30766571 ggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattccattgtttg 30766637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 486 - 576
Target Start/End: Complemental strand, 39110485 - 39110396
Alignment:
Q  486 gtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||||||||||||||||||| || |||||| || || ||||||| ||||||||||||||| ||| |||| |||||  ||||||||||||||    
T  39110485 gtgaattctattgtttgaattcaactcaaagtagttgaattcccacaaaacattacattcgctc-aaaacatttcttcatccaaacacact 39110396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 415 - 472
Target Start/End: Complemental strand, 35279977 - 35279920
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaatt 472  Q
    |||||| |||||||||||| |||||||||||||| ||||||||||||||||| |||||    
T  35279977 ctaagaatgtgtttggatgggggaatgttttgagggaatgtaatgttttgagtgaatt 35279920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 415 - 502
Target Start/End: Original strand, 7976544 - 7976632
Alignment:
Q  415 ctaagagtgtgtttg-gatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||  |||| | |||||||||||  |||||||||||||||| |||||| || ||  ||||||||||||||||||||||    
T  7976544 ctaagagtgtgttttagatgagagaatgttttgaaggaatgtaatgttttgaaggaatttaaatacattgaggtgaattctattgtttg 7976632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 418 - 502
Target Start/End: Complemental strand, 31189469 - 31189385
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||| ||| | ||||||||||||  |||||||||||||||| |||||||| || |||||||| |||| ||| |||||    
T  31189469 agagtgtgtttgaatgagagaatgttttgaggtaatgtaatgttttgagagaattcaaatactttgaggtaaattttatcgtttg 31189385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 415 - 547
Target Start/End: Original strand, 42130689 - 42130821
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 514  Q
    |||| ||||||||||| || |||||| |||||||   |||||||||||||||||||||||| ||| || | ||| |||| |    | |||| ||||||||    
T  42130689 ctaatagtgtgtttgggtgggggaatattttgaggtgatgtaatgttttgagggaattcaattatctttaagtggattcaaagagtagaattcacctcaa 42130788  T
Q  515 aataattaaattccctcaaaacattacattccc 547  Q
    | ||||| |||||||| |||| |||||||||||    
T  42130789 agtaattgaattccctaaaaagattacattccc 42130821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 418 - 493
Target Start/End: Original strand, 37321550 - 37321625
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 493  Q
    ||||||| |||||||| |||||| |||||||  || |||||||||||||| |||||||||| ||| ||||||||||    
T  37321550 agagtgtatttggatgggggaatattttgaggaaaagtaatgttttgaggaaattcaactactttaaggtgaattc 37321625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 456 - 505
Target Start/End: Complemental strand, 38506910 - 38506861
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 505  Q
    |||||||||||||||||||| || |||||||||||||| |||||||||||    
T  38506910 aatgttttgagggaattcaaataatttgaggtgaattccattgtttgaat 38506861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 507 - 576
Target Start/End: Original strand, 42005955 - 42006023
Alignment:
Q  507 cacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||||||  || ||||||||| |||||||||||||||||||| |||| ||| |||||||||||||||||    
T  42005955 cacctcaaggtatttaaattccttcaaaacattacattccctc-aaaacattcccccatccaaacacact 42006023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 523 - 576
Target Start/End: Complemental strand, 49457397 - 49457345
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||||||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  49457397 aattccctcaaaacattacattccctc-aaaacattcccccatccaaacacact 49457345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 421 - 502
Target Start/End: Original strand, 52527039 - 52527120
Alignment:
Q  421 gtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||| |||||||||||||  | |||||||||| ||  ||||||||| || |||||||| ||||| ||||||||    
T  52527039 gtgtgtttggatgggggaatgttttgaagggatgtaatgttatggaggaattcaaatactttgaggtaaattccattgtttg 52527120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 502 - 574
Target Start/End: Original strand, 21307529 - 21307600
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacaca 574  Q
    |||| ||||||||| || || ||||||||||||||||||||||||| | |||| ||| |||||||||||||||    
T  21307529 gaattcacctcaaagtatttgaattccctcaaaacattacattcccgc-aaaacattcccccatccaaacaca 21307600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 505
Target Start/End: Original strand, 21730898 - 21730988
Alignment:
Q  414 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 505  Q
    |||||||||||||||||||| ||||||||  | ||   |||||||||||||| ||||||||| || |||||| ||||||  |||||||||||    
T  21730898 tctaagagtgtgtttggatgagggaatgtcctaaggttatgtaatgttttgaaggaattcaaata-tttgagatgaatttcattgtttgaat 21730988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 415 - 474
Target Start/End: Original strand, 46001361 - 46001420
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattca 474  Q
    |||||||||||||||||||  ||||| |||||||  |||||||||||| |||||||||||    
T  46001361 ctaagagtgtgtttggatggcggaatattttgaggtaatgtaatgtttcgagggaattca 46001420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 576
Target Start/End: Complemental strand, 34088646 - 34088573
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| |||| |||| || || ||||||||||||||| ||||||||||| |||| ||||| |||||||||||||||    
T  34088646 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctc-aaaacatttctccatccaaacacact 34088573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 36397986 - 36398059
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| |||| |||| || || ||||||||||||||| ||||||||||| |||| ||| |||||||||||||||||    
T  36397986 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctc-aaaacattcccccatccaaacacact 36398059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 493
Target Start/End: Original strand, 332012 - 332049
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattc 493  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  332012 aatgttttgagggaattcaactactttgaggtgaattc 332049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 445 - 502
Target Start/End: Original strand, 8762153 - 8762210
Alignment:
Q  445 tgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||| ||||||||||| ||||||||||||| || ||||| |||||||| ||||||||    
T  8762153 tgagataatgtaatgttatgagggaattcaaatactttgatgtgaattccattgtttg 8762210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 508 - 577
Target Start/End: Original strand, 34396510 - 34396579
Alignment:
Q  508 acctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacacta 577  Q
    |||||||| || || ||||||||   || |||||||||||||||||||||| || |||||||||||||||    
T  34396510 acctcaaagtatttgaattcccttgtaatattacattccctcaaaaatattgcctcatccaaacacacta 34396579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 493
Target Start/End: Complemental strand, 39215995 - 39215922
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 493  Q
    |||||||||||||| | |||| |||||||  ||| ||||||||||||  ||||||| |||||||||||| ||||    
T  39215995 agtgtgtttggatgagagaatattttgaggtaatataatgttttgagaaaattcaattattttgaggtggattc 39215922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 418 - 475
Target Start/End: Original strand, 46635857 - 46635914
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaa 475  Q
    |||||||||||||||| |  |||||||||||  ||||||||||||||||| |||||||    
T  46635857 agagtgtgtttggatgagaaaatgttttgagctaatgtaatgttttgaggaaattcaa 46635914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 523 - 576
Target Start/End: Complemental strand, 47767486 - 47767434
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||||| |||||||||||||||||||| |||| ||| |||||||||||||||||    
T  47767486 aattccttcaaaacattacattccctc-aaaacattcccccatccaaacacact 47767434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 434 - 502
Target Start/End: Complemental strand, 50168666 - 50168598
Alignment:
Q  434 tgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||||||||||||||  ||||||||||||||||| || |||| || ||| || ||||||| ||||||||    
T  50168666 tgggaatgttttgaggtaatgtaatgttttgaggaaactcaaataattttagctgaattccattgtttg 50168598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 574
Target Start/End: Original strand, 35279920 - 35279970
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacaca 574  Q
    ||||| ||||||||||||||||||||| |||| ||| |||||||||||||||    
T  35279920 aattcactcaaaacattacattccctc-aaaacattcccccatccaaacaca 35279970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 456 - 502
Target Start/End: Original strand, 2104772 - 2104818
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||| |||||||||||| || ||||| |||||||||||||||||    
T  2104772 aatgtttcgagggaattcaaatactttgatgtgaattctattgtttg 2104818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 452 - 502
Target Start/End: Complemental strand, 13176600 - 13176550
Alignment:
Q  452 atgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||||||||||||  | ||| ||||| |||||||||||||    
T  13176600 atgtaatgttttgagggaattcaaagacttttaggtggattctattgtttg 13176550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 475
Target Start/End: Original strand, 30767099 - 30767161
Alignment:
Q  413 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaa 475  Q
    |||| ||||||| |||||||| || ||||||||||| |||| ||||||| ||| |||||||||    
T  30767099 ctcttagagtgtatttggatggggtaatgttttgagggaatctaatgttatgaaggaattcaa 30767161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 493
Target Start/End: Original strand, 25655335 - 25655372
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattc 493  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  25655335 aatgttttgagggaattcaactactttgagttgaattc 25655372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 523 - 576
Target Start/End: Complemental strand, 37054448 - 37054396
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||||| |||||||||||||||||||  |||| ||| |||||||||||||||||    
T  37054448 aattccttcaaaacattacattccct-taaaacattcccccatccaaacacact 37054396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 523 - 576
Target Start/End: Complemental strand, 46001418 - 46001366
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||||||| |||||||||||| |||| |||||||| | |||||||||||||||    
T  46001418 aattccctcgaaacattacattacctc-aaaatattccgccatccaaacacact 46001366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 523 - 576
Target Start/End: Original strand, 53470447 - 53470499
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||||||||||||| || |||||||| |||| |||||| ||||||||||||||    
T  53470447 aattccctcaaaacaatagattccctc-aaaacatttcctcatccaaacacact 53470499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 21264008 - 21264056
Alignment:
Q  330 ttcttatgtttaattgatcatctccatatttattctttagtttgattga 378  Q
    ||||| ||||| ||||||||||||||| || ||||||| ||||||||||    
T  21264008 ttcttttgtttgattgatcatctccatgttgattcttttgtttgattga 21264056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 25655445 - 25655409
Alignment:
Q  411 ttctctaagagtgtgtttggatgtgggaatgttttga 447  Q
    ||||||||||||||||||||||| || ||||||||||    
T  25655445 ttctctaagagtgtgtttggatggggaaatgttttga 25655409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 422 - 502
Target Start/End: Original strand, 47336885 - 47336965
Alignment:
Q  422 tgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||| |||||| || |||||||| ||  ||||||||||||||||  |||| || ||| || |||||||||| ||||||||    
T  47336885 tgtgtgtggatggggaaatgttttaaggtaatgtaatgttttgagataatttaaatatgtttaggtgaattccattgtttg 47336965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 94; Significance: 2e-45; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 414 - 579
Target Start/End: Original strand, 401 - 565
Alignment:
Q  414 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctca 513  Q
    |||||||||||||||||||| |||||| ||||||| |||  |||||||||||||||||||||||| ||   ||||||||||||||||||||  |||||||    
T  401 tctaagagtgtgtttggatgggggaatattttgagggaaaataatgttttgagggaattcaactacttcagggtgaattctattgtttgaactcacctca 500  T
Q  514 aaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacactata 579  Q
    || || || ||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  501 aagtagttgaattccctcaaaacattacattccctc-aaaacattcccccatccaaacacactata 565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 420 - 576
Target Start/End: Complemental strand, 562 - 407
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 519  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||| |    | |||| ||||   || ||     
T  562 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccctgaagtag 463  T
Q  520 ttaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    || ||||||||||||||||||  ||||||| |||||||| |||||||||||||||||    
T  462 ttgaattccctcaaaacattattttccctc-aaaatattcccccatccaaacacact 407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 94; Significance: 2e-45; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 414 - 579
Target Start/End: Complemental strand, 2192 - 2028
Alignment:
Q  414 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctca 513  Q
    |||||||||||||||||||| |||||| ||||||| |||  |||||||||||||||||||||||| ||   ||||||||||||||||||||  |||||||    
T  2192 tctaagagtgtgtttggatgggggaatattttgagggaaaataatgttttgagggaattcaactacttcagggtgaattctattgtttgaactcacctca 2093  T
Q  514 aaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacactata 579  Q
    || || || ||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  2092 aagtagttgaattccctcaaaacattacattccctc-aaaacattcccccatccaaacacactata 2028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 420 - 576
Target Start/End: Original strand, 2031 - 2186
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 519  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||| |    | |||| ||||   || ||     
T  2031 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccctgaagtag 2130  T
Q  520 ttaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    || ||||||||||||||||||  ||||||| |||||||| |||||||||||||||||    
T  2131 ttgaattccctcaaaacattattttccctc-aaaatattcccccatccaaacacact 2186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 422 - 547
Target Start/End: Complemental strand, 56429 - 56304
Alignment:
Q  422 tgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataatt 521  Q
    |||||||||||| |||||| ||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||  ||||||||| || ||    
T  56429 tgtgtttggatgagggaatattttgagggaaagtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaaagtagtt 56330  T
Q  522 aaattccctcaaaacattacattccc 547  Q
     |||||||||||||||||||||||||    
T  56329 gaattccctcaaaacattacattccc 56304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 450 - 574
Target Start/End: Original strand, 56306 - 56429
Alignment:
Q  450 gaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctc 549  Q
    ||||||||||||||||||||||||||||| |||||||||| ||| |    | |||| ||||| ||| || || ||||||||||||||||||| |||||||    
T  56306 gaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttccctc 56405  T
Q  550 aaaaatatttccccatccaaacaca 574  Q
     |||||||| || ||||||||||||    
T  56406 -aaaatattccctcatccaaacaca 56429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 68; Significance: 5e-30; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 415 - 502
Target Start/End: Original strand, 4072 - 4159
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  4072 ctaagagtgtgtttggataaaggaatgttttgagagaatgtaatgttttgagggaattcaaatactttgaggtgaattctattgtttg 4159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 553
Target Start/End: Complemental strand, 4150 - 4099
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaa 553  Q
    |||| ||||||||| || || ||||||||||||||||||||||| |||||||    
T  4150 gaattcacctcaaagtatttgaattccctcaaaacattacattctctcaaaa 4099  T

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Target: scaffold0048 (Bit Score: 61; Significance: 8e-26; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 420 - 500
Target Start/End: Original strand, 82945 - 83025
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtt 500  Q
    |||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  82945 agtgtgtttggatgggtgaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtt 83025  T

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Target: scaffold0048; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 576
Target Start/End: Complemental strand, 83018 - 82945
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| ||||| ||| || || ||||||||||||||||||||||||||| |||| |||  ||||||||||||||||    
T  83018 gaattcaccttaaagtagttgaattccctcaaaacattacattccctc-aaaacattcacccatccaaacacact 82945  T

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Target: scaffold0009 (Bit Score: 60; Significance: 3e-25; HSPs: 4)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 418 - 497
Target Start/End: Original strand, 41997 - 42076
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctatt 497  Q
    |||||||||||| |||  ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41997 agagtgtgtttgaatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctatt 42076  T

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Target: scaffold0009; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 416 - 475
Target Start/End: Complemental strand, 42139 - 42080
Alignment:
Q  416 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaa 475  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||    
T  42139 taagagtgtgtttggatgggggaacgttttgagggaatgtaatgttttgagagaattcaa 42080  T

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Target: scaffold0009; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 502 - 553
Target Start/End: Complemental strand, 42072 - 42021
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaa 553  Q
    |||| ||||||||| || || |||||||||||||||||||||||||||||||    
T  42072 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaa 42021  T

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Target: scaffold0009; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 523 - 576
Target Start/End: Original strand, 42083 - 42135
Alignment:
Q  523 aattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    ||||| ||||||||||||||||||||| ||||  || |||||||||||||||||    
T  42083 aattctctcaaaacattacattccctc-aaaacgttcccccatccaaacacact 42135  T

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Target: scaffold0318 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 418 - 502
Target Start/End: Original strand, 2867 - 2950
Alignment:
Q  418 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||| || |||||||||||||| ||||||||    
T  2867 agagtgtgtttagatgggggaatgtttcgagagaatgtaatgttttgagggaattcaaata-tttgaggtgaattccattgtttg 2950  T

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Target: scaffold0400 (Bit Score: 56; Significance: 7e-23; HSPs: 2)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 419 - 502
Target Start/End: Complemental strand, 4570 - 4487
Alignment:
Q  419 gagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||| |||||||||||||| |||| ||||||||||||| ||||||| ||||||| ||||||||| ||||||||    
T  4570 gagtgtgtttggatgagggaatgttttgagggaatataatgttttgaggaaattcaaatattttggggtgaattccattgtttg 4487  T

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Target: scaffold0400; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 4496 - 4569
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| |||| ||||||| || |||| ||||||||||||| |||||||| |||| ||| || ||||||||||||||    
T  4496 gaattcaccccaaaatatttgaatttcctcaaaacattatattccctc-aaaacattccctcatccaaacacact 4569  T

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Target: scaffold0365 (Bit Score: 56; Significance: 7e-23; HSPs: 2)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 419 - 502
Target Start/End: Complemental strand, 5214 - 5131
Alignment:
Q  419 gagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||| |||||||||||||| |||| ||||||||||||| ||||||| ||||||| ||||||||| ||||||||    
T  5214 gagtgtgtttggatgagggaatgttttgagggaatataatgttttgaggaaattcaaatattttggggtgaattccattgtttg 5131  T

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Target: scaffold0365; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 5140 - 5213
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| |||| ||||||| || |||| ||||||||||||| |||||||| |||| ||| || ||||||||||||||    
T  5140 gaattcaccccaaaatatttgaatttcctcaaaacattatattccctc-aaaacattccctcatccaaacacact 5213  T

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Target: scaffold0129 (Bit Score: 51; Significance: 7e-20; HSPs: 3)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 415 - 501
Target Start/End: Original strand, 19195 - 19280
Alignment:
Q  415 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgttt 501  Q
    |||| |||||||||||||| |||| | ||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||||||    
T  19195 ctaaaagtgtgtttggatgggggagtattttgagggaatgtaatgttttga-ggaattcaaatattttgaggtgaattccattgttt 19280  T

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Target: scaffold0129; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 502 - 576
Target Start/End: Complemental strand, 19272 - 19200
Alignment:
Q  502 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaaatatttccccatccaaacacact 576  Q
    |||| |||||||||||| || |||||| |||||||||||||||||||| |||||| | |||||||||||||||||    
T  19272 gaattcacctcaaaatatttgaattcc-tcaaaacattacattccctc-aaaatactcccccatccaaacacact 19200  T

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Target: scaffold0129; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 420 - 492
Target Start/End: Complemental strand, 19855 - 19784
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaatt 492  Q
    |||||||||||||| |||| ||||||||| |||||||||||||| ||  ||||||| || |||||||||||||    
T  19855 agtgtgtttggatggggga-tgttttgagggaatgtaatgttttaagaaaattcaaatactttgaggtgaatt 19784  T

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Target: scaffold0027 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 419 - 502
Target Start/End: Original strand, 10887 - 10970
Alignment:
Q  419 gagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||| |||   ||||||||| || |||||||||||||||||||||||||| || ||||| |||||||| ||||||||    
T  10887 gagtgtgtttgaatggaagaatgttttaagggaatgtaatgttttgagggaattcaaatactttgacgtgaattccattgtttg 10970  T

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Target: scaffold0301 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 420 - 502
Target Start/End: Original strand, 7153 - 7235
Alignment:
Q  420 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||  ||||||||||||| ||||||| |||||| ||||||||||| || ||||  |||||||| ||||||||    
T  7153 agtgtgtttggatggaggaatgttttgagggaatgtattgttttaagggaattcaaatactttggagtgaattccattgtttg 7235  T

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Target: scaffold0240 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 456 - 515
Target Start/End: Complemental strand, 17620 - 17561
Alignment:
Q  456 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 515  Q
    ||||||||||||||||||||||  ||||||||| ||| |||||||||  |||||||||||    
T  17620 aatgttttgagggaattcaactcctttgaggtgcattttattgtttggttccacctcaaa 17561  T

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Target: scaffold0337 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 411 - 502
Target Start/End: Complemental strand, 15943 - 15855
Alignment:
Q  411 ttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||| |||||||||||||||||| |||| ||||||| | |||||||||| | |||| |||||||| || ||  |||||||||| ||||||||    
T  15943 ttctttaagagtgtgtttggatgggggattgttttg-gggaatgtaatgctatgagagaattcaaatactt--aggtgaattccattgtttg 15855  T

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Target: scaffold0065 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 411 - 502
Target Start/End: Complemental strand, 2985 - 2897
Alignment:
Q  411 ttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    |||| |||||||||||||||||| |||| ||||||| | |||||||||| | |||| |||||||| || ||  |||||||||| ||||||||    
T  2985 ttctttaagagtgtgtttggatgggggattgttttg-gggaatgtaatgctatgagagaattcaaatactt--aggtgaattccattgtttg 2897  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 452 - 502
Target Start/End: Original strand, 130388 - 130438
Alignment:
Q  452 atgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 502  Q
    ||||||||||||||||||||||||  | ||| ||||| |||||||||||||    
T  130388 atgtaatgttttgagggaattcaaagacttttaggtggattctattgtttg 130438  T

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Target: scaffold0014 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 492
Target Start/End: Complemental strand, 221236 - 221195
Alignment:
Q  451 aatgtaatgttttgagggaattcaactattttgaggtgaatt 492  Q
    ||||||||||||| ||||||||||| ||||||| ||||||||    
T  221236 aatgtaatgttttaagggaattcaaatattttggggtgaatt 221195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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