View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4764_high_5 (Length: 230)
Name: NF4764_high_5
Description: NF4764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4764_high_5 |
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Alignment Details
Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 47001266 - 47001487
Alignment:
| Q |
1 |
cttggaagatataaaacaattggaatcttttctgcaatacaaacactggttagttacattactattagttctaagtttcatttttattccgccgaaataa |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
47001266 |
cttggaagatataaaacaattggaatcttttctgcaatacaaacactggttagttacattactattagttctaagtttcatttatattccgccgaaataa |
47001365 |
T |
|
| Q |
101 |
acttacaccatctctcctcctacttagggggaccaaaattgcgaaattaaaaatatgagaccaaaatagtatatgacgtaaaaatagtttctaatatttg |
200 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47001366 |
acttacaccatct---ctcctacttagggggaccaaaattgcgaaattaaaaatatgagaccaaaatagtatatgacgtaaaaatagtttctaatatttg |
47001462 |
T |
|
| Q |
201 |
ttccaaacatttcgaagcgattagt |
225 |
Q |
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||||||||||||||||| ||||||| |
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| T |
47001463 |
ttccaaacatttcgaagtgattagt |
47001487 |
T |
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