View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4764_low_13 (Length: 202)

Name: NF4764_low_13
Description: NF4764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4764_low_13
NF4764_low_13
[»] chr6 (34 HSPs)
chr6 (1-202)||(29808553-29808753)
chr6 (1-202)||(28496143-28496342)
chr6 (1-202)||(1561554-1561754)
chr6 (70-202)||(19303211-19303342)
chr6 (63-202)||(22779897-22780036)
chr6 (8-199)||(21939642-21939831)
chr6 (70-202)||(18409497-18409628)
chr6 (64-202)||(29060854-29060991)
chr6 (1-201)||(19652446-19652645)
chr6 (64-201)||(20594087-20594223)
chr6 (1-202)||(4667883-4668082)
chr6 (87-202)||(17287466-17287581)
chr6 (1-202)||(4185493-4185692)
chr6 (1-202)||(4189208-4189407)
chr6 (1-202)||(4674730-4674929)
chr6 (1-202)||(23019659-23019858)
chr6 (1-202)||(27332954-27333153)
chr6 (1-202)||(27393694-27393893)
chr6 (64-202)||(20637964-20638091)
chr6 (65-200)||(25611395-25611530)
chr6 (64-201)||(20360642-20360768)
chr6 (64-202)||(18457029-18457165)
chr6 (65-202)||(18821500-18821626)
chr6 (1-106)||(22080502-22080607)
chr6 (64-177)||(25629050-25629162)
chr6 (70-200)||(25603057-25603187)
chr6 (64-110)||(22831815-22831861)
chr6 (1-202)||(31155068-31155267)
chr6 (71-116)||(16920389-16920434)
chr6 (8-77)||(27325227-27325296)
chr6 (1-40)||(19668625-19668664)
chr6 (1-103)||(35008403-35008503)
chr6 (70-110)||(11185821-11185861)
chr6 (146-202)||(16920314-16920370)
[»] chr3 (50 HSPs)
chr3 (1-201)||(12933981-12934180)
chr3 (1-201)||(49667754-49667953)
chr3 (1-202)||(32307920-32308119)
chr3 (1-201)||(1644354-1644552)
chr3 (1-202)||(9513160-9513361)
chr3 (1-202)||(9521135-9521336)
chr3 (8-200)||(12340011-12340201)
chr3 (64-201)||(17247957-17248093)
chr3 (8-199)||(14665864-14666053)
chr3 (8-199)||(14735377-14735566)
chr3 (8-199)||(14669019-14669208)
chr3 (1-202)||(13209998-13210197)
chr3 (64-202)||(40213391-40213528)
chr3 (64-200)||(14572902-14573037)
chr3 (8-199)||(12852037-12852226)
chr3 (1-198)||(16104032-16104227)
chr3 (64-202)||(26687200-26687338)
chr3 (64-202)||(13442587-13442725)
chr3 (64-202)||(18438848-18438985)
chr3 (65-202)||(11424433-11424569)
chr3 (64-200)||(17488170-17488306)
chr3 (64-201)||(25476056-25476192)
chr3 (70-202)||(14973174-14973305)
chr3 (70-200)||(17499658-17499788)
chr3 (64-200)||(14576505-14576640)
chr3 (1-201)||(16097581-16097780)
chr3 (3-201)||(49389315-49389496)
chr3 (64-202)||(53070369-53070505)
chr3 (121-202)||(14179693-14179773)
chr3 (64-149)||(43841245-43841330)
chr3 (64-202)||(20698117-20698244)
chr3 (1-106)||(1465174-1465279)
chr3 (4-57)||(15471179-15471232)
chr3 (70-202)||(23083031-23083163)
chr3 (120-200)||(4588487-4588566)
chr3 (1-107)||(12171868-12171974)
chr3 (145-202)||(43842572-43842629)
chr3 (8-48)||(4588610-4588650)
chr3 (63-200)||(30030151-30030277)
chr3 (1-100)||(43927386-43927484)
chr3 (163-201)||(12171788-12171826)
chr3 (164-202)||(12399608-12399646)
chr3 (4-106)||(14234745-14234847)
chr3 (143-201)||(324627-324685)
chr3 (64-106)||(12399519-12399561)
chr3 (163-201)||(17247191-17247229)
chr3 (143-201)||(22109946-22110004)
chr3 (64-198)||(42386725-42386858)
chr3 (8-42)||(45797426-45797460)
chr3 (60-100)||(1982584-1982624)
[»] scaffold0217 (1 HSPs)
scaffold0217 (64-202)||(16269-16407)
[»] scaffold0211 (1 HSPs)
scaffold0211 (1-202)||(28479-28679)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-201)||(132904-133103)
[»] scaffold0075 (1 HSPs)
scaffold0075 (6-200)||(7966-8158)
[»] chr2 (24 HSPs)
chr2 (1-202)||(22133887-22134085)
chr2 (1-202)||(28406230-28406430)
chr2 (70-202)||(23660342-23660473)
chr2 (64-202)||(22730903-22731041)
chr2 (70-202)||(27753894-27754026)
chr2 (64-202)||(298485-298622)
chr2 (64-202)||(32451599-32451737)
chr2 (1-202)||(23071633-23071831)
chr2 (64-202)||(22737850-22737988)
chr2 (64-202)||(23076755-23076891)
chr2 (64-202)||(22337429-22337566)
chr2 (137-202)||(37797-37862)
chr2 (137-202)||(23286236-23286301)
chr2 (137-202)||(23654080-23654145)
chr2 (1-104)||(22459327-22459429)
chr2 (1-103)||(23791528-23791629)
chr2 (137-202)||(20309480-20309545)
chr2 (147-202)||(28291972-28292027)
chr2 (65-110)||(37878-37923)
chr2 (1-40)||(23207531-23207570)
chr2 (64-106)||(23286174-23286216)
chr2 (163-201)||(25176254-25176292)
chr2 (1-45)||(7556-7600)
chr2 (4-40)||(25109145-25109181)
[»] chr4 (41 HSPs)
chr4 (1-201)||(12774250-12774448)
chr4 (8-200)||(24029000-24029190)
chr4 (12-199)||(22633886-22634071)
chr4 (64-202)||(14038962-14039100)
chr4 (8-200)||(20156962-20157152)
chr4 (64-201)||(44928594-44928730)
chr4 (64-202)||(15091210-15091348)
chr4 (8-200)||(13812481-13812671)
chr4 (1-201)||(8846625-8846825)
chr4 (8-153)||(3332144-3332287)
chr4 (1-202)||(16596898-16597096)
chr4 (1-202)||(15552066-15552264)
chr4 (64-202)||(7799010-7799148)
chr4 (64-202)||(16377192-16377329)
chr4 (64-202)||(22636747-22636885)
chr4 (64-202)||(44053142-44053280)
chr4 (64-202)||(44102524-44102660)
chr4 (94-202)||(16239662-16239769)
chr4 (120-202)||(6190802-6190884)
chr4 (64-198)||(7089190-7089313)
chr4 (1-100)||(15190568-15190667)
chr4 (1-201)||(39705959-39706157)
chr4 (1-106)||(15099601-15099706)
chr4 (64-197)||(3096956-3097078)
chr4 (137-200)||(12903132-12903195)
chr4 (137-202)||(14052983-14053048)
chr4 (64-200)||(17047756-17047880)
chr4 (64-202)||(21814973-21815109)
chr4 (64-202)||(21815302-21815438)
chr4 (64-202)||(21818395-21818531)
chr4 (137-201)||(43198259-43198323)
chr4 (1-40)||(43198384-43198423)
chr4 (163-200)||(17046728-17046765)
chr4 (1-105)||(53081915-53082018)
chr4 (64-127)||(7894014-7894077)
chr4 (1-40)||(46640285-46640324)
chr4 (143-201)||(15464600-15464658)
chr4 (143-201)||(15868306-15868364)
chr4 (64-197)||(52242868-52243000)
chr4 (70-106)||(23374125-23374161)
chr4 (16-48)||(32851642-32851674)
[»] scaffold0150 (1 HSPs)
scaffold0150 (6-201)||(32339-32533)
[»] scaffold0023 (3 HSPs)
scaffold0023 (1-201)||(101646-101844)
scaffold0023 (2-82)||(100628-100708)
scaffold0023 (1-48)||(39995-40042)
[»] chr5 (37 HSPs)
chr5 (8-200)||(22119865-22120055)
chr5 (8-200)||(24767009-24767199)
chr5 (1-202)||(19660507-19660706)
chr5 (64-202)||(9078266-9078403)
chr5 (64-202)||(11580915-11581052)
chr5 (64-202)||(21985817-21985954)
chr5 (64-202)||(23390166-23390304)
chr5 (64-202)||(24529534-24529672)
chr5 (64-202)||(1096781-1096918)
chr5 (1-201)||(21565795-21565994)
chr5 (64-202)||(25421846-25421983)
chr5 (64-202)||(25431708-25431845)
chr5 (64-202)||(36154498-36154635)
chr5 (1-201)||(22959204-22959403)
chr5 (70-202)||(24493888-24494019)
chr5 (64-202)||(13025624-13025761)
chr5 (64-202)||(13095808-13095945)
chr5 (1-201)||(19669150-19669350)
chr5 (1-201)||(21329166-21329365)
chr5 (13-201)||(5888846-5889033)
chr5 (64-202)||(21292651-21292778)
chr5 (1-103)||(25743973-25744074)
chr5 (1-106)||(21741308-21741413)
chr5 (77-202)||(21871241-21871365)
chr5 (77-202)||(21875521-21875645)
chr5 (1-106)||(26011799-26011903)
chr5 (137-200)||(8286525-8286588)
chr5 (1-104)||(20026706-20026808)
chr5 (137-202)||(22075394-22075459)
chr5 (143-200)||(22107056-22107113)
chr5 (64-201)||(22144364-22144500)
chr5 (143-201)||(20026534-20026592)
chr5 (4-106)||(21501919-21502019)
chr5 (64-106)||(22075332-22075374)
chr5 (64-106)||(22107139-22107181)
chr5 (60-100)||(14079454-14079494)
chr5 (60-104)||(31342409-31342453)
[»] scaffold0628 (1 HSPs)
scaffold0628 (1-202)||(2473-2672)
[»] scaffold0839 (1 HSPs)
scaffold0839 (64-201)||(1748-1884)
[»] scaffold0192 (1 HSPs)
scaffold0192 (8-200)||(10169-10359)
[»] chr7 (41 HSPs)
chr7 (8-200)||(39267318-39267508)
chr7 (1-202)||(15754557-15754757)
chr7 (8-200)||(9751222-9751412)
chr7 (19-199)||(18302448-18302626)
chr7 (1-201)||(810800-810999)
chr7 (1-201)||(28504972-28505169)
chr7 (64-202)||(3564034-3564171)
chr7 (64-202)||(9509502-9509640)
chr7 (64-202)||(38227794-38227931)
chr7 (64-200)||(15143709-15143844)
chr7 (64-200)||(44116819-44116953)
chr7 (8-200)||(2831978-2832167)
chr7 (1-201)||(44014425-44014624)
chr7 (64-202)||(17061630-17061767)
chr7 (70-202)||(12699151-12699283)
chr7 (1-202)||(34201036-34201234)
chr7 (1-104)||(11995796-11995898)
chr7 (64-202)||(12756387-12756523)
chr7 (137-202)||(40443763-40443828)
chr7 (1-201)||(16056580-16056778)
chr7 (1-104)||(9389462-9389565)
chr7 (1-104)||(15116733-15116835)
chr7 (1-103)||(67997-68099)
chr7 (8-105)||(2529818-2529915)
chr7 (1-102)||(15113196-15113296)
chr7 (4-201)||(16219387-16219582)
chr7 (137-202)||(16385928-16385993)
chr7 (137-202)||(27847514-27847579)
chr7 (1-201)||(22073168-22073366)
chr7 (1-57)||(47832060-47832116)
chr7 (163-201)||(11995729-11995767)
chr7 (163-201)||(47832220-47832258)
chr7 (64-201)||(12255462-12255598)
chr7 (137-200)||(26212371-26212434)
chr7 (143-201)||(2279789-2279847)
chr7 (163-201)||(16324418-16324456)
chr7 (64-110)||(16386009-16386055)
chr7 (163-201)||(18006053-18006091)
chr7 (64-106)||(40443702-40443744)
chr7 (60-100)||(11987504-11987544)
chr7 (1-57)||(16324258-16324313)
[»] chr1 (32 HSPs)
chr1 (1-201)||(21754288-21754485)
chr1 (64-202)||(433321-433458)
chr1 (64-202)||(34510094-34510231)
chr1 (64-200)||(50209885-50210020)
chr1 (64-202)||(22532583-22532720)
chr1 (1-202)||(20918854-20919052)
chr1 (1-201)||(33681260-33681459)
chr1 (1-201)||(52927652-52927850)
chr1 (1-201)||(22237881-22238079)
chr1 (70-202)||(22354242-22354374)
chr1 (63-202)||(20135500-20135638)
chr1 (4-201)||(20248531-20248727)
chr1 (1-106)||(20637101-20637206)
chr1 (1-104)||(12271800-12271902)
chr1 (1-103)||(22921635-22921737)
chr1 (1-106)||(35981451-35981556)
chr1 (137-202)||(22355855-22355920)
chr1 (137-202)||(22357541-22357606)
chr1 (1-105)||(16368051-16368154)
chr1 (1-57)||(49261592-49261648)
chr1 (137-202)||(20846900-20846965)
chr1 (137-202)||(27250410-27250475)
chr1 (1-104)||(21861335-21861437)
chr1 (137-200)||(38801074-38801137)
chr1 (137-202)||(21027055-21027120)
chr1 (163-201)||(22921538-22921576)
chr1 (165-202)||(21301208-21301245)
chr1 (1-98)||(21896030-21896126)
chr1 (2-105)||(50613881-50613983)
chr1 (2-105)||(50621709-50621811)
chr1 (65-107)||(21162080-21162122)
chr1 (13-106)||(28194213-28194306)
[»] scaffold1137 (1 HSPs)
scaffold1137 (1-201)||(1972-2171)
[»] scaffold0347 (1 HSPs)
scaffold0347 (9-199)||(288-476)
[»] chr8 (38 HSPs)
chr8 (64-202)||(6759570-6759708)
chr8 (64-202)||(41598498-41598635)
chr8 (1-202)||(5865947-5866145)
chr8 (64-202)||(18878907-18879045)
chr8 (64-202)||(20536521-20536659)
chr8 (1-202)||(21249634-21249832)
chr8 (1-202)||(21255472-21255670)
chr8 (64-202)||(22627049-22627186)
chr8 (64-202)||(23406694-23406832)
chr8 (1-202)||(17141166-17141364)
chr8 (1-201)||(21673956-21674155)
chr8 (71-202)||(28648714-28648844)
chr8 (64-202)||(18818080-18818217)
chr8 (64-202)||(16092011-16092148)
chr8 (1-201)||(26355369-26355568)
chr8 (86-202)||(7373084-7373200)
chr8 (64-202)||(22875379-22875516)
chr8 (1-202)||(21491245-21491443)
chr8 (64-202)||(21923598-21923736)
chr8 (70-202)||(23648873-23649004)
chr8 (137-202)||(45130701-45130766)
chr8 (64-202)||(21918680-21918808)
chr8 (137-202)||(31971630-31971695)
chr8 (10-198)||(19801101-19801286)
chr8 (70-200)||(25362823-25362942)
chr8 (2-106)||(38855015-38855119)
chr8 (143-202)||(16199328-16199387)
chr8 (13-201)||(39834095-39834282)
chr8 (1-105)||(37116602-37116704)
chr8 (1-40)||(21285850-21285889)
chr8 (163-201)||(38854922-38854960)
chr8 (1-105)||(17266757-17266860)
chr8 (1-101)||(22364915-22365014)
chr8 (1-40)||(6520620-6520659)
chr8 (1-40)||(23760670-23760709)
chr8 (143-201)||(20499052-20499110)
chr8 (164-201)||(23760511-23760548)
chr8 (1-101)||(24353277-24353376)
[»] scaffold0016 (2 HSPs)
scaffold0016 (8-200)||(207191-207381)
scaffold0016 (64-202)||(2164-2302)
[»] scaffold0124 (1 HSPs)
scaffold0124 (8-199)||(24324-24513)
[»] scaffold0122 (2 HSPs)
scaffold0122 (70-198)||(33168-33296)
scaffold0122 (64-201)||(25736-25872)
[»] scaffold0037 (2 HSPs)
scaffold0037 (8-199)||(80005-80194)
scaffold0037 (1-34)||(22509-22542)
[»] scaffold0166 (1 HSPs)
scaffold0166 (8-200)||(9506-9696)
[»] scaffold0056 (2 HSPs)
scaffold0056 (64-202)||(16885-17022)
scaffold0056 (138-202)||(79032-79096)
[»] scaffold0011 (2 HSPs)
scaffold0011 (64-202)||(52225-52363)
scaffold0011 (64-202)||(167660-167787)
[»] scaffold0305 (1 HSPs)
scaffold0305 (65-202)||(20717-20854)
[»] scaffold0228 (3 HSPs)
scaffold0228 (64-202)||(4821-4959)
scaffold0228 (64-202)||(12403-12541)
scaffold0228 (64-202)||(22355-22493)
[»] scaffold0221 (1 HSPs)
scaffold0221 (8-200)||(12481-12670)
[»] scaffold0218 (2 HSPs)
scaffold0218 (1-202)||(28950-29148)
scaffold0218 (1-105)||(7841-7944)
[»] scaffold0413 (1 HSPs)
scaffold0413 (64-202)||(15285-15422)
[»] scaffold0145 (1 HSPs)
scaffold0145 (64-202)||(39074-39210)
[»] scaffold0142 (2 HSPs)
scaffold0142 (64-202)||(17094-17231)
scaffold0142 (8-172)||(7471-7633)
[»] scaffold0121 (1 HSPs)
scaffold0121 (64-202)||(8202-8340)
[»] scaffold0556 (1 HSPs)
scaffold0556 (1-201)||(7062-7261)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-202)||(2115-2313)
[»] scaffold1984 (1 HSPs)
scaffold1984 (1-201)||(381-580)
[»] scaffold0026 (4 HSPs)
scaffold0026 (70-202)||(40176-40307)
scaffold0026 (84-188)||(26559-26662)
scaffold0026 (65-196)||(59179-59308)
scaffold0026 (123-202)||(39601-39680)
[»] scaffold0540 (1 HSPs)
scaffold0540 (64-202)||(683-820)
[»] scaffold0292 (2 HSPs)
scaffold0292 (64-202)||(3783-3921)
scaffold0292 (64-202)||(656-793)
[»] scaffold0175 (2 HSPs)
scaffold0175 (64-202)||(13405-13543)
scaffold0175 (1-202)||(34373-34571)
[»] scaffold0100 (1 HSPs)
scaffold0100 (64-202)||(20426-20563)
[»] scaffold0261 (2 HSPs)
scaffold0261 (1-202)||(15911-16109)
scaffold0261 (8-48)||(18165-18205)
[»] scaffold0125 (1 HSPs)
scaffold0125 (1-201)||(45460-45660)
[»] scaffold0021 (2 HSPs)
scaffold0021 (64-202)||(124898-125033)
scaffold0021 (122-201)||(62932-63011)
[»] scaffold1257 (1 HSPs)
scaffold1257 (1-96)||(1991-2086)
[»] scaffold0042 (1 HSPs)
scaffold0042 (64-202)||(23972-24109)
[»] scaffold0003 (1 HSPs)
scaffold0003 (64-202)||(339621-339758)
[»] scaffold0627 (1 HSPs)
scaffold0627 (72-201)||(226-354)
[»] scaffold0352 (1 HSPs)
scaffold0352 (86-202)||(17678-17794)
[»] scaffold0476 (1 HSPs)
scaffold0476 (1-104)||(13019-13122)
[»] scaffold0034 (2 HSPs)
scaffold0034 (70-202)||(51554-51686)
scaffold0034 (1-198)||(32788-32983)
[»] scaffold0475 (1 HSPs)
scaffold0475 (1-202)||(9328-9527)
[»] scaffold0266 (1 HSPs)
scaffold0266 (120-202)||(18628-18710)
[»] scaffold0080 (1 HSPs)
scaffold0080 (64-202)||(40226-40362)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-201)||(19517-19716)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-201)||(160936-161135)
[»] scaffold0647 (1 HSPs)
scaffold0647 (70-202)||(5791-5923)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-201)||(130158-130357)
[»] scaffold0639 (1 HSPs)
scaffold0639 (70-202)||(8794-8926)
[»] scaffold0876 (1 HSPs)
scaffold0876 (132-202)||(2755-2825)
[»] scaffold0555 (2 HSPs)
scaffold0555 (1-106)||(10305-10409)
scaffold0555 (163-201)||(10239-10277)
[»] scaffold0427 (1 HSPs)
scaffold0427 (137-202)||(13870-13935)
[»] scaffold0333 (2 HSPs)
scaffold0333 (1-106)||(6864-6969)
scaffold0333 (1-106)||(14244-14349)
[»] scaffold0120 (3 HSPs)
scaffold0120 (125-202)||(16461-16538)
scaffold0120 (122-202)||(32629-32709)
scaffold0120 (122-202)||(46296-46376)
[»] scaffold1842 (1 HSPs)
scaffold1842 (64-202)||(730-857)
[»] scaffold0231 (1 HSPs)
scaffold0231 (64-200)||(23196-23331)
[»] scaffold0070 (1 HSPs)
scaffold0070 (70-202)||(4843-4974)
[»] scaffold0621 (2 HSPs)
scaffold0621 (2-104)||(8723-8824)
scaffold0621 (1-201)||(6787-6987)
[»] scaffold0598 (1 HSPs)
scaffold0598 (63-202)||(733-861)
[»] scaffold0456 (1 HSPs)
scaffold0456 (137-202)||(10107-10172)
[»] scaffold0395 (1 HSPs)
scaffold0395 (70-202)||(632-764)
[»] scaffold0235 (2 HSPs)
scaffold0235 (137-202)||(11194-11259)
scaffold0235 (8-42)||(13822-13856)
[»] scaffold0130 (2 HSPs)
scaffold0130 (64-141)||(28144-28220)
scaffold0130 (143-202)||(28928-28987)
[»] scaffold0810 (1 HSPs)
scaffold0810 (13-201)||(3195-3382)
[»] scaffold0718 (1 HSPs)
scaffold0718 (137-200)||(4814-4877)
[»] scaffold0141 (1 HSPs)
scaffold0141 (64-139)||(39790-39864)
[»] scaffold0049 (1 HSPs)
scaffold0049 (64-139)||(74948-75022)
[»] scaffold0503 (1 HSPs)
scaffold0503 (64-202)||(12243-12379)
[»] scaffold0358 (4 HSPs)
scaffold0358 (144-202)||(318-376)
scaffold0358 (144-202)||(5094-5152)
scaffold0358 (70-106)||(255-291)
scaffold0358 (70-106)||(5031-5067)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-103)||(15598-15700)
[»] scaffold0389 (1 HSPs)
scaffold0389 (145-202)||(13278-13335)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-201)||(10780-10978)
[»] scaffold0247 (1 HSPs)
scaffold0247 (140-196)||(6504-6560)
[»] scaffold0207 (2 HSPs)
scaffold0207 (1-57)||(2457-2513)
scaffold0207 (163-201)||(2315-2353)
[»] scaffold0193 (1 HSPs)
scaffold0193 (64-202)||(13524-13651)
[»] scaffold0031 (1 HSPs)
scaffold0031 (70-202)||(20096-20226)
[»] scaffold0351 (1 HSPs)
scaffold0351 (143-202)||(16660-16719)
[»] scaffold0507 (1 HSPs)
scaffold0507 (1-106)||(7822-7926)
[»] scaffold0484 (1 HSPs)
scaffold0484 (64-200)||(1227-1352)
[»] scaffold0165 (3 HSPs)
scaffold0165 (64-200)||(3794-3919)
scaffold0165 (64-200)||(7858-7983)
scaffold0165 (143-201)||(27313-27371)
[»] scaffold0403 (1 HSPs)
scaffold0403 (137-202)||(5223-5288)
[»] scaffold0138 (3 HSPs)
scaffold0138 (1-106)||(13192-13296)
scaffold0138 (1-105)||(18002-18105)
scaffold0138 (163-201)||(13352-13390)
[»] scaffold0114 (1 HSPs)
scaffold0114 (137-202)||(15146-15211)
[»] scaffold0113 (1 HSPs)
scaffold0113 (137-202)||(32439-32504)
[»] scaffold1765 (1 HSPs)
scaffold1765 (1-57)||(1335-1390)
[»] scaffold1351 (1 HSPs)
scaffold1351 (1-105)||(259-362)
[»] scaffold0530 (2 HSPs)
scaffold0530 (4-48)||(856-900)
scaffold0530 (163-201)||(699-737)
[»] scaffold0243 (1 HSPs)
scaffold0243 (4-48)||(5944-5988)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-57)||(14509-14565)
[»] scaffold0151 (1 HSPs)
scaffold0151 (147-202)||(10540-10595)
[»] scaffold0084 (1 HSPs)
scaffold0084 (84-154)||(10497-10568)
[»] scaffold0032 (2 HSPs)
scaffold0032 (137-200)||(51954-52017)
scaffold0032 (64-110)||(51892-51938)
[»] scaffold0005 (1 HSPs)
scaffold0005 (6-105)||(267909-268007)
[»] scaffold0139 (1 HSPs)
scaffold0139 (1-103)||(38571-38672)
[»] scaffold0420 (1 HSPs)
scaffold0420 (1-98)||(6054-6150)
[»] scaffold0064 (1 HSPs)
scaffold0064 (137-202)||(47361-47426)
[»] scaffold0320 (1 HSPs)
scaffold0320 (137-201)||(12381-12445)
[»] scaffold0098 (1 HSPs)
scaffold0098 (8-48)||(26847-26887)
[»] scaffold0088 (1 HSPs)
scaffold0088 (137-201)||(21276-21340)
[»] scaffold0046 (1 HSPs)
scaffold0046 (1-61)||(11542-11602)
[»] scaffold1403 (1 HSPs)
scaffold1403 (1-40)||(802-841)
[»] scaffold0490 (2 HSPs)
scaffold0490 (137-200)||(2327-2390)
scaffold0490 (64-106)||(2265-2307)
[»] scaffold0309 (2 HSPs)
scaffold0309 (137-200)||(6985-7048)
scaffold0309 (64-106)||(6923-6965)
[»] scaffold0278 (1 HSPs)
scaffold0278 (163-201)||(6005-6043)
[»] scaffold0022 (1 HSPs)
scaffold0022 (143-201)||(80730-80788)
[»] scaffold0123 (1 HSPs)
scaffold0123 (136-201)||(25567-25632)
[»] scaffold0116 (2 HSPs)
scaffold0116 (137-201)||(43455-43519)
scaffold0116 (137-201)||(47375-47439)
[»] scaffold0106 (2 HSPs)
scaffold0106 (64-116)||(1599-1651)
scaffold0106 (64-116)||(7576-7628)
[»] scaffold0076 (1 HSPs)
scaffold0076 (137-201)||(24191-24255)
[»] scaffold0044 (1 HSPs)
scaffold0044 (60-100)||(62552-62592)
[»] scaffold0017 (1 HSPs)
scaffold0017 (60-100)||(192757-192797)
[»] scaffold0012 (1 HSPs)
scaffold0012 (137-201)||(227878-227942)


Alignment Details
Target: chr6 (Bit Score: 131; Significance: 4e-68; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 29808753 - 29808553
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||| ||||||||||||| |||||||||||||||||    
T  29808753 ctcacatcaactcgtgcgacaaagatcgcatt-aacctaaacaaggcattctgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcgagt 29808655  T
Q  101 tcaggttagatttccaaacgtttcattct-aaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    |||||| ||||| ||||| |||||||||| |||||||||||| |||||||||||| ||| || |||| ||||||||||| ||||||||||||||||||||    
T  29808654 tcaggtcagattcccaaa-gtttcattctaaaaatctttccaggttcaatctcattctacattcttttctaatcattattagacatgttcaggcactcaa 29808556  T
Q  200 aag 202  Q
    |||    
T  29808555 aag 29808553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 28496342 - 28496143
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||| ||||||||||||| |||||||||||||||||    
T  28496342 ctcacatcaactcgtgcgacaaagatcgcatt-aacctaaacaaggcattctgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcgagt 28496244  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    |||||| |||||  |||| |||||||||| || |||||||| |||||||||||| ||| || |||| ||||||||||| |||||||||||||||||||||    
T  28496243 tcaggtcagattctcaaaagtttcattct-aagtctttccaggttcaatctcattctacattcttttctaatcattattagacatgttcaggcactcaaa 28496145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 1561554 - 1561754
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | | ||| |||||| |||  ||||||||||||| |||||||| |||| |||    
T  1561554 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaaaacaagtgctcccgaggcgagagcctatgctcgccgtggcaagt 1561653  T
Q  101 tcaggttagatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    || ||| ||||| || |||  ||||||||| || | |||||| |||||||||||| |||  | |||||||||||||||| ||||||||||||||||||||    
T  1561654 tc-ggtcagattctcaaaagttttcattct-aagtttttccaggttcaatctcattctactttctttcctaatcattattagacatgttcaggcactcaa 1561751  T
Q  200 aag 202  Q
    |||    
T  1561752 aag 1561754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 70 - 202
Target Start/End: Complemental strand, 19303342 - 19303211
Alignment:
Q  70 gaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcct 169  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||| ||||||||||||| ||||| || |||||||||||| ||| || |||||||    
T  19303342 gaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaa-tcttttcaggttcaatctcattctacattctttcct 19303244  T
Q  170 aatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||| |||||||||||||||||||||||    
T  19303243 aatcattattagacatgttcaggcactcaaaag 19303211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 63 - 202
Target Start/End: Complemental strand, 22780036 - 22779897
Alignment:
Q  63 tactcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatg 162  Q
    |||||| |||||||||||||||||| ||| ||||||||| |||| ||| | ||| | ||||||||||| |||||||||| |||||||||||| ||| ||     
T  22780036 tactcgcgaggcgagagcctttgcttgccgtggcgagtttaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacatt 22779937  T
Q  163 ctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  22779936 ctttcctaatcattattagacatgttcaggcactcaaaag 22779897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 8 - 199
Target Start/End: Original strand, 21939642 - 21939831
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcaggtt 107  Q
    ||||||||||||||| |||| ||||||||||||||||| || ||| ||| || ||| |||| ||||||||||||| |||||||||||||||||||| ||     
T  21939642 caactcgtgcgacaaggatcacatttaacctaaacaagacattctgtaatactagtgctcgcgaggcgagagcctctgctcgccatggcgagttca-gtc 21939740  T
Q  108 agatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    ||||| |||||| |||| ||||| || |||||||| | |||||||||| ||| || |||||||||||| ||| | ||||||||||||||||||    
T  21939741 agattctccaaa-gttttattct-aagtctttccaggctcaatctcatcctacattctttcctaatcaatattacacatgttcaggcactcaa 21939831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 70 - 202
Target Start/End: Complemental strand, 18409628 - 18409497
Alignment:
Q  70 gaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcct 169  Q
    ||||||||||||| |||||||| |||||||||||||| ||| ||| ||| ||||||||||||| |||||||| |||||||||||| ||| || |||||||    
T  18409628 gaggcgagagcctctgctcgccgtggcgagttcaggtcagaattcaaaaagtttcattctaaa-tctttccaggttcaatctcattctacattctttcct 18409530  T
Q  170 aatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||  ||||||||| |||||||||||||    
T  18409529 aatcattaatagacatgttaaggcactcaaaag 18409497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 29060854 - 29060991
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| | |||| | |||||||||||||| ||||||||||| ||| ||||||| |||||||||| |||||||||||| ||| || |    
T  29060854 actcgcgaggcgagagcctctactcgtcgtggcgagttcaggtcagatttccaaaagtt-cattctacaatctttccaggttcaatctcatcctacattc 29060952  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
     ||||||||||||||  ||||||||||||||||||||||    
T  29060953 cttcctaatcattattggacatgttcaggcactcaaaag 29060991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 19652446 - 19652645
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagta-ctcgggaggcgagagcctttgctcgccatggcgag 99  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| | | | ||||  |  || | || ||||||||||||| | ||||||||||||||    
T  19652446 ctcacatcaactcgtgcgacaaagatcgcatttatcctaaacaaggtattttgtaact-agttagcccgcgaggcgagagcctctactcgccatggcgag 19652544  T
Q  100 ttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    |||||||   |||  ||||  || ||||||||| |||||||| |||||||||||| ||  |  |||||||||||||||| ||||||||||||||||||||    
T  19652545 ttcaggtacaattcacaaaaatt-cattctaaagtctttccaggttcaatctcattcttcaatctttcctaatcattattagacatgttcaggcactcaa 19652643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 64 - 201
Target Start/End: Original strand, 20594087 - 20594223
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| | |||||||||||| ||||||||||| |||| |||||| |||||||||| |||||||||||| ||| || |    
T  20594087 actcgcgaggcgagagcctctgctcgccgtagcgagttcaggtcagatttccaaaagttt-attctacaatctttccaggttcaatctcatcctacattc 20594185  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    || |||||||||  | ||||||||| ||||||||||||    
T  20594186 ttccctaatcatatttagacatgtttaggcactcaaaa 20594223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 4668082 - 4667883
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagta-ctcgggaggcgagagcctttgctcgccatggcgag 99  Q
    |||||| ||||||||||||||| ||||||||||||||||  ||||||| ||| ||| |   ||| |||| ||||||||||||| | ||||||||||||||    
T  4668082 ctcacaacaactcgtgcgacaaggatcgcatttaacctag-caaggcattctgtaa-atgggtagctcgcgaggcgagagcctctactcgccatggcgag 4667985  T
Q  100 ttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    ||||||||   ||  ||||  || ||||||||| |||||||| || ||||||||  ||| || ||||||||||| |||| |||| |||||||||||||||    
T  4667984 ttcaggttcagttcacaaaaatt-cattctaaactctttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaa 4667886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 17287581 - 17287466
Alignment:
Q  87 tcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatg 186  Q
    ||||| ||||||||| |||| ||| | ||| | ||||||||||| |||||||||| || ||||| ||| ||| || |||||||||||||||| |||||||    
T  17287581 tcgccgtggcgagtttaggtcagaatcccacaagtttcattctacaatctttccaggtacaatcacatcctacattctttcctaatcattattagacatg 17287482  T
Q  187 ttcaggcactcaaaag 202  Q
    ||||||||||||||||    
T  17287481 ttcaggcactcaaaag 17287466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 4185692 - 4185493
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagta-ctcgggaggcgagagcctttgctcgccatggcgag 99  Q
    |||||| ||||||||||| ||| ||||||||||||||||  ||||||| ||||||| |   ||| |||| ||||||||||||| | ||||||||||||||    
T  4185692 ctcacaacaactcgtgcggcaaggatcgcatttaacctag-caaggcattctataa-atgggtagctcgcgaggcgagagcctctactcgccatggcgag 4185595  T
Q  100 ttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    ||||||||   ||  ||||  || ||||||||| |||||||| |||||||||||  ||| || ||||| ||||| |||| |||| |||||| ||||||||    
T  4185594 ttcaggttcagttcacaaaaatt-cattctaaactctttccaggttcaatctcactctacattctttcataatcgttattagacttgttcatgcactcaa 4185496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 4189208 - 4189407
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagta-ctcgggaggcgagagcctttgctcgccatggcgag 99  Q
    |||||| ||||||||||||||| ||||||||||||||||  ||||||| ||| ||| |   ||| |||| ||||||||||||| | ||||||||| ||||    
T  4189208 ctcacaacaactcgtgcgacaacgatcgcatttaacctag-caaggcattctgtaa-atgggtagctcgcgaggcgagagcctctactcgccatgacgag 4189305  T
Q  100 ttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    || |||||   ||  ||||  || ||||||||| |||||||| || ||||||||  ||| || ||||||||||| |||| |||| |||||||||||||||    
T  4189306 tttaggttcagttcacaaaaatt-cattctaaactctttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaa 4189404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 4674929 - 4674730
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagta-ctcgggaggcgagagcctttgctcgccatggcgag 99  Q
    |||||| ||||||||||||||| ||||||||||||||||  ||||||| ||| ||| |   ||| |||| ||||||||||||| | ||||||||| ||||    
T  4674929 ctcacaacaactcgtgcgacaaggatcgcatttaacctag-caaggcattctgtaa-atgggtagctcgcgaggcgagagcctctactcgccatgacgag 4674832  T
Q  100 ttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    || |||||   ||  ||||  || ||||||||| |||||||| || ||||||||  ||| || ||||||||||| |||| |||| |||||||||||||||    
T  4674831 ttaaggttcagttcacaaaaatt-cattctaaactctttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaa 4674733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 23019659 - 23019858
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||||| |||||||||||||||||||||||| |||| || | | |||    |  ||||| ||||| || |||| | |||||||||||||||    
T  23019659 ctcacatcaactcgttcgacaaagatcgcatttaacctaaccaag-cattttgtaattggacaactcgcgaggcaagggcctctactcgccatggcgagt 23019757  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||||   | | |||||  || |||||| |||   ||||| |||||||||||  |||||  |||||||||||||||| | |||||||||||||||||||    
T  23019758 tcaggtgtaactcccaaaaatt-cattcttaaaatattccaggttcaatctcaatctaaaatctttcctaatcattatcacacatgttcaggcactcaaa 23019856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 27333153 - 27332954
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||| |||| |||||||||||| ||| ||| ||| |||         ||| ||||||||||||| | |||||||||||||||    
T  27333153 ctcacatcaactcgtgcgacaaggatcacatttaacctaa-caaagcattctgtaattgggcagttcgcgaggcgagagcctctactcgccatggcgagt 27333055  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||||   | |  ||||  || |||||||||||||||||| |||||| ||||| |||||  ||||||||||||| || | |||||||||| ||||||||    
T  27333054 tcaggtgcaactcacaaaactt-cattctaaaatctttccaggttcaacctcattctaaaatctttcctaatcatcattatacatgttcagccactcaaa 27332956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 27393893 - 27393694
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||| |||| |||||||||||| ||| ||| ||| |||         ||| ||||||||||||| | |||||||||||||||    
T  27393893 ctcacatcaactcgtgcgacaaggatcacatttaacctaa-caaagcattctgtaattgggcagttcgcgaggcgagagcctctactcgccatggcgagt 27393795  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||||   | |  ||||  || |||||||||||||||||| |||||| ||||| |||||  ||||||||||||| || | |||||||||| ||||||||    
T  27393794 tcaggtgcaactcacaaaactt-cattctaaaatctttccaggttcaacctcattctaaaatctttcctaatcatcattatacatgttcagccactcaaa 27393696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 20638091 - 20637964
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| |||| ||||||||||||||||| |||||||||||||| ||| | ||| | |||||||||           || |||||||||||| ||| || |    
T  20638091 actcgcgaggtgagagcctttgctcgccgtggcgagttcaggtcagaatcccacaagtttcattc-----------caggttcaatctcatcctacattc 20638003  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  20638002 tttcctaatcattattagacatgttcaggcactcaaaag 20637964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 65 - 200
Target Start/End: Complemental strand, 25611530 - 25611395
Alignment:
Q  65 ctcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaac-gtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    |||| ||||||||||||| ||||| ||||||||||||||||| ||| | | ||   ||||||||||||  |||||||| || ||||||||||||  || |    
T  25611530 ctcgcgaggcgagagcctctgctctccatggcgagttcaggtcagaatcctaagttgtttcattctaag-tctttccaggtccaatctcatgctgcattc 25611432  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaa 200  Q
      ||||||||||||| |||||||||||||||||||||    
T  25611431 actcctaatcattattagacatgttcaggcactcaaa 25611395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 64 - 201
Target Start/End: Complemental strand, 20360768 - 20360642
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| |||||||||||||  |||||||||||||||||||||| ||| | ||| | |||||||||           || |||||||||||| ||| || |    
T  20360768 actcgcgaggcgagagcctcagctcgccatggcgagttcaggtcagaatcccacaagtttcattc-----------caggttcaatctcatcctacattc 20360680  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  20360679 tttcctaatcattattagacatgttcaggcactcaaaa 20360642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 18457029 - 18457165
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| | ||||||||||| ||||||||| || || | ||| ||| |||||| || |  | ||| |||||||||||| ||| || |    
T  18457029 actcgcgaggcgagagcctctactcgccatggctagttcaggtcagcttccaaaaagtt-cattcttaattaat-ccaggttcaatctcattctacattc 18457126  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  18457127 tttcctaatcattattaaacatgttcaggcactcaaaag 18457165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 65 - 202
Target Start/End: Complemental strand, 18821626 - 18821500
Alignment:
Q  65 ctcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgct 164  Q
    |||| ||||||||||||| ||||||||||||||||||||||| ||| | ||| | |||||||||           || |||||||||||| ||| || ||    
T  18821626 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattc-----------caggttcaatctcatcctacattct 18821538  T
Q  165 ttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
     ||||||||||||| | |||||||||||||||||||||    
T  18821537 ctcctaatcattattaaacatgttcaggcactcaaaag 18821500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 22080607 - 22080502
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||| |||||||||   |||||||||||   ||| | | |||    |||| ||||||||||||| | |||||||||||||||    
T  22080607 ctcacatcaactcgtgcgacaaggatcgcattattcctaaacaaggtgttctgtcagacacaagctcgcgaggcgagagcctctactcgccatggcgagt 22080508  T
Q  101 tcaggt 106  Q
    ||||||    
T  22080507 tcaggt 22080502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 177
Target Start/End: Complemental strand, 25629162 - 25629050
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| ||||||||| ||||||| ||||| | | |  |||| |||| |||||||||| |||||| |||||||||||| ||| |       
T  25629162 actcgcgaggcgagagcctctgctcgccacggcgagtacaggtcataatcacaaaagttt-attctaaaatatttccaggttcaatctcattctacaata 25629064  T
Q  164 tttcctaatcatta 177  Q
    ||||||||||||||    
T  25629063 tttcctaatcatta 25629050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 200
Target Start/End: Complemental strand, 25603187 - 25603057
Alignment:
Q  70 gaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaac-gtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcc 168  Q
    ||||||||||||| |||||||||||| ||||||| || ||| | | ||   ||||||||||||  |||||||| || |||||||||  |  || |  |||    
T  25603187 gaggcgagagcctctgctcgccatggtgagttcaagtcagaatcctaagttgtttcattctaag-tctttccaggtccaatctcatcatgcattcactcc 25603089  T
Q  169 taatcattatgagacatgttcaggcactcaaa 200  Q
    |||||||||| |||||||||||||||||||||    
T  25603088 taatcattattagacatgttcaggcactcaaa 25603057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 64 - 110
Target Start/End: Original strand, 22831815 - 22831861
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttaga 110  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||||    
T  22831815 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggttaga 22831861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 31155267 - 31155068
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagta-ctcgggaggcgagagcctttgctcgccatggcgag 99  Q
    |||||| ||||||||||||||| || |||||||||||||| |||||||   | ||| |   ||| |||| ||||||||||||| |||||||||||| |||    
T  31155267 ctcacaacaactcgtgcgacaaggaccgcatttaacctaa-caaggcatgttgtaa-aggggtagctcgcgaggcgagagcctctgctcgccatggagag 31155170  T
Q  100 ttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    | ||||||  ||| ||||    ||| || |   ||||||||| |||||||||||| ||| || |||||| |||| |||| |||| | |||||||||||||    
T  31155169 tacaggttc-attcccaaggaattcgttttctgatctttccaggttcaatctcattctacattctttcccaatcgttattagacttattcaggcactcaa 31155071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 16920434 - 16920389
Alignment:
Q  71 aggcgagagcctttgctcgccatggcgagttcaggttagatttcca 116  Q
    |||||||||||| ||||||||||||||||||||||| ||| |||||    
T  16920434 aggcgagagcctctgctcgccatggcgagttcaggtcagaattcca 16920389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 27325296 - 27325227
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgag 77  Q
    ||||||||||||||||||| | ||||||| ||||||||||| ||| ||| || ||| |||| ||||||||    
T  27325296 caactcgtgcgacaaagattgtatttaacataaacaaggcattctgtaatactagtgctcgcgaggcgag 27325227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 19668625 - 19668664
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaa 40  Q
    |||||||||||||||||||||||| || ||||||||||||    
T  19668625 ctcacatcaactcgtgcgacaaaggtcacatttaacctaa 19668664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 35008403 - 35008503
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||||||| |||||| || |||||| ||||| |||| |||||| |  |||||   |||| ||||||||||||| | ||||| |||||||||    
T  35008403 ctcacatcaactcgtgcaacaaaggtcacatttatcctaa-caag-cagtctgtctcacaacagctcgcgaggcgagagcctctactcgctatggcgagt 35008500  T
Q  101 tca 103  Q
    |||    
T  35008501 tca 35008503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 11185821 - 11185861
Alignment:
Q  70 gaggcgagagcctttgctcgccatggcgagttcaggttaga 110  Q
    |||||||| |||| |||||||| ||||||||||||||||||    
T  11185821 gaggcgagggcctctgctcgccgtggcgagttcaggttaga 11185861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 16920370 - 16920314
Alignment:
Q  146 caatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    |||||| || ||| || |||| ||||||||||| |||||| ||||||||||||||||    
T  16920370 caatcttatcctacattcttttctaatcattattagacatattcaggcactcaaaag 16920314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 121; Significance: 3e-62; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 12934180 - 12933981
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||| || |||||||||||||||||    
T  12934180 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggaagtctgtaacacaagtactcgcgaggcgagagtctctgctcgccatggcgagt 12934081  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    |||||||  | |||  ||  ||||||||||||||||||||| |||||||||||| ||  |  |||||||||||||||| |||||||||||||||||||||    
T  12934080 tcaggtt-cagttcacaaaatttcattctaaaatctttccaggttcaatctcattctctaatctttcctaatcattattagacatgttcaggcactcaaa 12933982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 49667953 - 49667754
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||    
T  49667953 ctcacatcaactcgtgcgacaaagatcgtatttaacctaaacaaggcagtctgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcgagt 49667854  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    |||||||  | |||  ||  ||||||||||||||||||||| |||||||||||| ||  |  |||||||||||||||| |||||||||||||| ||||||    
T  49667853 tcaggtt-cagttcacaatatttcattctaaaatctttccaggttcaatctcattctctaatctttcctaatcattattagacatgttcaggcgctcaaa 49667755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 32307920 - 32308119
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||| ||||||||||||| |||||||||||||||||    
T  32307920 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcgagt 32308019  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    |||||||   || |||||   ||||||||||| |||| | | |||||||||||| ||  |  |||||||||||||||| ||| |||||||||||||||||    
T  32308020 tcaggttcagttcccaaa--attcattctaaagtcttcctaggttcaatctcattctccaatctttcctaatcattattagatatgttcaggcactcaaa 32308117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 1644552 - 1644354
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||| | ||||||||||||||| ||||||||||||| |||||||||||||||||    
T  1644552 ctcacatcaactcgtgcgacaaggatcgcatttaacttaaacaaggcagtttgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcgagt 1644453  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    |||||||   ||  ||||   ||||||||||| ||||  || |||||||||||| ||  |  |||||||||||||||| |||||||||||||||||||||    
T  1644452 tcaggttcagttcacaaa--attcattctaaagtcttctcaggttcaatctcattctctaatctttcctaatcattatcagacatgttcaggcactcaaa 1644355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 9513160 - 9513361
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||| |||| ||||||||||||||||||||||| ||| ||||||| ||| ||||||||||| ||  ||||||||||||| |||||||||||| ||||    
T  9513160 ctcacataaacttgtgcgacaaagatcgcatttaacataagcaaggcattctgtaacacaagtaatctcgaggcgagagcctctgctcgccatggtgagt 9513259  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    |||||||   ||  ||||  |||||||||||||||||| || |||||||||||| ||  |  |||||||||||||||| |||||||||||||||||||||    
T  9513260 tcaggtttagttcacaaaaatttcattctaaaatcttttcaggttcaatctcattctctaatctttcctaatcattattagacatgttcaggcactcaaa 9513359  T
Q  201 ag 202  Q
    ||    
T  9513360 ag 9513361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 9521135 - 9521336
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||| |||| ||||||||||||||||||||||| ||| ||||||| ||| ||||||||||| ||  ||||||||||||| |||||||||||| ||||    
T  9521135 ctcacataaacttgtgcgacaaagatcgcatttaacataagcaaggcattctgtaacacaagtaatctcgaggcgagagcctctgctcgccatggtgagt 9521234  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    |||||||   ||  ||||  |||||||||||||||||| || |||||||||||| ||  |  |||||||||||||||| |||||||||||||||||||||    
T  9521235 tcaggtttagttcacaaaaatttcattctaaaatcttttcaggttcaatctcattctctaatctttcctaatcattattagacatgttcaggcactcaaa 9521334  T
Q  201 ag 202  Q
    ||    
T  9521335 ag 9521336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 8 - 200
Target Start/End: Original strand, 12340011 - 12340201
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcaggtt 107  Q
    |||||||||||||||||||| |||||||||||||||||||| | | ||| || ||| |||| ||||||||||||| |||||||||||||||||||| |||    
T  12340011 caactcgtgcgacaaagatcacatttaacctaaacaaggcattatgtaatactagtgctcgcgaggcgagagcctctgctcgccatggcgagttca-gtt 12340109  T
Q  108 agatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||| |||||| |||||||||| || |||||||| |||||||||||| ||| || |||||||||||| ||| |||||||||||||||||||||    
T  12340110 agattctccaaa-gtttcattct-aagtctttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaa 12340201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 64 - 201
Target Start/End: Complemental strand, 17248093 - 17247957
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| ||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||| |||||||||||| ||| || |    
T  17248093 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaa-gtttcattctaaaatctttccaggttcaatctcattctacattc 17247995  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  17247994 tttcctaatcattattagacatgttcaggcactcaaaa 17247957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 8 - 199
Target Start/End: Original strand, 14665864 - 14666053
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcaggtt 107  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||| || ||| |||| ||||||||||||| |||||||||| ||||||||| ||     
T  14665864 caactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctctgctcgccattgcgagttca-gtc 14665962  T
Q  108 agatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    ||||| |||||| |||||||||| || |||||||| |||||||||||| ||| || |||||||||||| ||| || |||||||||||||||||    
T  14665963 agattctccaaa-gtttcattct-aagtctttccaggttcaatctcatcctacattctttcctaatcaatattagccatgttcaggcactcaa 14666053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 8 - 199
Target Start/End: Original strand, 14735377 - 14735566
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcaggtt 107  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||| || ||| |||| ||||||||||||| |||||||||| ||||||||| ||     
T  14735377 caactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctctgctcgccattgcgagttca-gtc 14735475  T
Q  108 agatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    ||||| |||||| |||||||||| || |||||||| |||||||||||| ||| || |||||||||||| ||| || |||||||||||||||||    
T  14735476 agattctccaaa-gtttcattct-aagtctttccaggttcaatctcatcctacattctttcctaatcaatattagccatgttcaggcactcaa 14735566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 8 - 199
Target Start/End: Original strand, 14669019 - 14669208
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcaggtt 107  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||| ||| || ||| |||| |||| |||||||| |||||||||||||||||||| ||     
T  14669019 caactcgtgcgacaaagatcgaatttaacctaaacaaggcattctgtaatactagtgctcgcgaggtgagagcctctgctcgccatggcgagttca-gtc 14669117  T
Q  108 agatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    ||||| |||||| |||||||||| || |||||||| |||||||||||| ||| || |||||||| ||| ||| ||||||||||||||||||||    
T  14669118 agattctccaaa-gtttcattct-aagtctttccaggttcaatctcatcctacattctttcctattcaatattagacatgttcaggcactcaa 14669208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 13210197 - 13209998
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||| |||| ||||||||||||| | |||||||||||||||    
T  13210197 ctcacatcaactcgtgcgacaaagatcacatttaacctaaacaaggcattctgtaacacaagtgctcgcgaggcgagagcctctactcgccatggcgagt 13210098  T
Q  101 tcaggttagatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    || ||| | ||| || | |  ||||||||| || |||||||| |||||||||||| |||  | |||||||||||| ||| ||||||||| ||||||||||    
T  13210097 tc-ggtcacattctcaagagttttcattct-aagtctttccaggttcaatctcattctactttctttcctaatca-tattagacatgtttaggcactcaa 13210001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 40213528 - 40213391
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||||||||||||||||||| ||||| ||| ||||||| |||||||||| |||||||||||| ||| || |    
T  40213528 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagattcccaaaagtt-cattctacaatctttccaggttcaatctcatcctacattc 40213430  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  40213429 tttcctaatcattattagacatgttcaggcactcaaaag 40213391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 64 - 200
Target Start/End: Original strand, 14572902 - 14573037
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| | ||||||||||||||||||||| ||||||||||| |||||||||| || |||||||| |||||||||||| ||| || |    
T  14572902 actcgcgaggcgagagcctctactcgccatggcgagttcaggtcagatttccaaaggtttcattct-aagtctttccaggttcaatctcattctacattc 14573000  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||||||||||||| |||||||||||||||||||||    
T  14573001 tttcctaatcattattagacatgttcaggcactcaaa 14573037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 8 - 199
Target Start/End: Complemental strand, 12852226 - 12852037
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcaggtt 107  Q
    |||||||| | |||| |||||||||||||||||||| |||| ||| ||| |||||| |||| ||||| ||||||| |||||||||||||||||||| ||     
T  12852226 caactcgtactacaaggatcgcatttaacctaaacatggcattctgtaatacaagtgctcgcgaggcaagagcctctgctcgccatggcgagttca-gtc 12852128  T
Q  108 agatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    |||||  |||| |||||||||| || ||||||||  ||||||||||| ||| || |||||||||||| ||| ||||||||||||||||||||    
T  12852127 agattatcaaaagtttcattct-aagtctttccagattcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaa 12852037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 16104032 - 16104227
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||  ||||||||||||| ||||||||| | |||||    
T  16104032 ctcacatcaactcgtgcgacaaagagcgcatttaacctaaacaaggcagtctgtaacaccagtactcacgaggcgagagcctctgctcgccacgacgagt 16104131  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactca 198  Q
    || | ||  |||  ||||   |||| |||||| |||| ||| |||||| ||||| ||  |  |||||||||||||||| |||||||||||||||||||    
T  16104132 tcggattcaattcacaaa--attcaatctaaagtcttcccaggttcaacctcattctccaatctttcctaatcattattagacatgttcaggcactca 16104227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 26687200 - 26687338
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| ||| | ||| | ||||||||||| |||||||||| |||||||||||| ||| || |    
T  26687200 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattc 26687299  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  26687300 tttcctaatcattattagacatgtttaggcactcaaaag 26687338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 13442587 - 13442725
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||| ||||||||| ||| | ||| | ||||||||||| |||||||||| |||||||||||| ||| ||      
T  13442587 actcgcgaggcgagagcctctgctcgccgtggcaagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattt 13442686  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  13442687 tttcctaatcattattagacatgttcaggcactcaaaag 13442725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 18438848 - 18438985
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||| | ||||||| ||| ||||||| ||||||||||||| |||||||| ||||||||||||  || || |    
T  18438848 actcgcgaggcgagagcctctgctcgccgtggcaacttcaggtcagaattccaaaagtttcattctaaa-tctttccaggttcaatctcattttacattc 18438946  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  18438947 tttcctaatcattattagacatgttcaggcactcaaaag 18438985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 65 - 202
Target Start/End: Complemental strand, 11424569 - 11424433
Alignment:
Q  65 ctcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgct 164  Q
    |||| ||||||||||||| | |||||| |||||||||||||| ||| ||| ||| ||||||||||||| |||||||| |||||||||||| ||| ||  |    
T  11424569 ctcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagagttcaaaaagtttcattctaaa-tctttccaggttcaatctcattctacattat 11424471  T
Q  165 ttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    |||||||||||||| |||||||||||||||||||||||    
T  11424470 ttcctaatcattattagacatgttcaggcactcaaaag 11424433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 64 - 200
Target Start/End: Original strand, 17488170 - 17488306
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||||| ||||||| ||| | | | | ||||||||||| |||||||||| |||||||||||| ||| || |    
T  17488170 actcgcgaggcgagagcctctgctcgccgtggcgatttcaggtcagaatcctacaagtttcattctacaatctttccaggttcaatctcatcctacattc 17488269  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||||||||||||| |||||||||||||||||||||    
T  17488270 tttcctaatcattattagacatgttcaggcactcaaa 17488306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 64 - 201
Target Start/End: Complemental strand, 25476192 - 25476056
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| | |||| | |||||||||||||| ||||| ||||| |||||||||||||||||||||| |||| ||||||| ||| || |    
T  25476192 actcgcgaggcgagagcctctactcgtcgtggcgagttcaggtcagatt-ccaaaagtttcattctaaaatctttccaggttcgatctcattctacattc 25476094  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    |||| |||||||||| ||||||||||||| ||||||||    
T  25476093 tttcataatcattattagacatgttcaggtactcaaaa 25476056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 70 - 202
Target Start/End: Original strand, 14973174 - 14973305
Alignment:
Q  70 gaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcct 169  Q
    ||||||||||||| |||||||| |||||||||||||| ||| ||||||| ||| | ||||||||||||| |  ||| |||||||| ||| || |||||||    
T  14973174 gaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccaaaagtt-ctttctaaaatcttttctggtttaatctcattctacattctttcct 14973272  T
Q  170 aatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||| |||||||||||||||||||||||    
T  14973273 aatcattattagacatgttcaggcactcaaaag 14973305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 70 - 200
Target Start/End: Original strand, 17499658 - 17499788
Alignment:
Q  70 gaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcct 169  Q
    ||||||||||||| ||||| || |||||| ||||||| ||| | | | | ||||||||||| |||||||||| |||||||||||| ||| || |||||||    
T  17499658 gaggcgagagcctctgctcaccgtggcgaattcaggtcagaatccaacaagtttcattctacaatctttccaggttcaatctcatcctacattctttcct 17499757  T
Q  170 aatcattatgagacatgttcaggcactcaaa 200  Q
    ||||||||| |||||||||||||||||||||    
T  17499758 aatcattattagacatgttcaggcactcaaa 17499788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 64 - 200
Target Start/End: Complemental strand, 14576640 - 14576505
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| | |||||| ||||| |||||||| ||||||||||| |||||||||| || |||||||| ||||||| |||| ||| || |    
T  14576640 actcgcgaggcgagagcctctactcgccgtggcgtgttcaggtcagatttccaaaggtttcattct-aagtctttccaggttcaatgtcattctacattc 14576542  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||| |||||||| || |||||||||||||||||||||    
T  14576541 ttttctaatcataattagacatgttcaggcactcaaa 14576505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 16097581 - 16097780
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagta-ctcgggaggcgagagcctttgctcgccatggcgag 99  Q
    |||||||||||||||||||||||||||||||||||| |||||||| || | | ||||  |  || |||| ||||||||||||| | ||| ||||||||||    
T  16097581 ctcacatcaactcgtgcgacaaagatcgcatttaacataaacaagacattttgtaac-tagttagctcgcgaggcgagagcctctactcaccatggcgag 16097679  T
Q  100 ttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    |||||||   |||  ||||   ||||||||||||||||| || |||||||||||| ||  |  |||||||||| ||||| |||||||||||| |||||||    
T  16097680 ttcaggtccaattcacaaa-aattcattctaaaatcttttcaggttcaatctcattctccaatctttcctaataattattagacatgttcagacactcaa 16097778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 201
Target Start/End: Complemental strand, 49389496 - 49389315
Alignment:
Q  3 cacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttc 102  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||               | ||||||||| ||| |||||||||||||||||||    
T  49389496 cacatcaactcgtgcgacaaggatcgcatttaacctaaacaaggtagtct---------------gcgaggcgagaacctctgctcgccatggcgagttc 49389412  T
Q  103 aggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    |||||   ||  ||||   ||||||||||| ||| |||| |||||||||||| ||  |  |||||||||||||||| ||||||||||||||||||||||    
T  49389411 aggttcagttcacaaaa--ttcattctaaagtctctccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaa 49389315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 53070505 - 53070369
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| | ||||||||||||||||||||| || || | ||| ||| |||||| || |  | ||| |||||||||||| ||| || |    
T  53070505 actcgcgaggcgagagcctctactcgccatggcgagttcaggtcagcttccaaaaagtt-cattcttaattaat-ccaggttcaatctcattctacattc 53070408  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  53070407 tttcctaatcattattaaacatgttcaggcactcaaaag 53070369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 121 - 202
Target Start/End: Original strand, 14179693 - 14179773
Alignment:
Q  121 tttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    |||||||||||  |||||||| |||||||||||| ||| || |||||||||||||||| |||||||||||||||||||||||    
T  14179693 tttcattctaag-tctttccaagttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaag 14179773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 149
Target Start/End: Original strand, 43841245 - 43841330
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaat 149  Q
    ||||| |||||||| ||||||||||||  |||||||||||||| ||| ||||| | ||||||||||| |||||||||| |||||||    
T  43841245 actcgcgaggcgagggcctttgctcgctgtggcgagttcaggtcagaattccacaagtttcattctacaatctttccaggttcaat 43841330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 20698244 - 20698117
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| ||| | ||| | |||||||||           || |||||||||||| ||| || |    
T  20698244 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattc-----------caggttcaatctcatcctacattc 20698156  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  20698155 tttcctaatcattattagacatgttcagacactcaaaag 20698117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 1465279 - 1465174
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||||||||||||||||  | |||||||||||||||||| ||| ||||       |||| ||||||||||||| | ||||||||||| |||    
T  1465279 ctcacatcaactcgtgcgacaaagattacttttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcaagt 1465180  T
Q  101 tcaggt 106  Q
    ||||||    
T  1465179 tcaggt 1465174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 15471179 - 15471232
Alignment:
Q  4 acatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataac 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  15471179 acatcaactcgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaac 15471232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 70 - 202
Target Start/End: Complemental strand, 23083163 - 23083031
Alignment:
Q  70 gaggcgagagcctttgctcgccatggcgagttcaggtt-agatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcc 168  Q
    ||||||||||||| | |||||||||||||||| ||| | ||| | | ||| ||||||||||||| |||||||| || ||||||||| ||| ||  | |||    
T  23083163 gaggcgagagcctctactcgccatggcgagttaagggtcagaatccaaaaagtttcattctaaa-tctttccaggtccaatctcatcctacattttgtcc 23083065  T
Q  169 taatcattatgagacatgttcaggcactcaaaag 202  Q
    |||||| ||| |||||| | ||||||||||||||    
T  23083064 taatcactattagacatatccaggcactcaaaag 23083031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 4588566 - 4588487
Alignment:
Q  120 gtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||||||||||  ||||| || |||||||||||| ||| || |||||||||||| ||| |||||||||||||||||||||    
T  4588566 gtttcattctaag-tctttacaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaa 4588487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 12171974 - 12171868
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagta-ctcgggaggcgagagcctttgctcgccatggcgag 99  Q
    |||||||||||| |||||||||  |||||||||||||||||||||||| ||| ||||  |  ||  ||| ||||||||||||| | ||||||||||| ||    
T  12171974 ctcacatcaacttgtgcgacaagaatcgcatttaacctaaacaaggcattctgtaac-tagttagatcgcgaggcgagagcctctactcgccatggccag 12171876  T
Q  100 ttcaggtt 107  Q
    ||||||||    
T  12171875 ttcaggtt 12171868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 43842572 - 43842629
Alignment:
Q  145 tcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    |||||||||| ||| || |||||||||||||||| ||||||| |||||||||||||||    
T  43842572 tcaatctcatcctacattctttcctaatcattattagacatgctcaggcactcaaaag 43842629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 4588650 - 4588610
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaacaaggca 48  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  4588650 caactcgtgcgacaaagctcgcatttaacctaaacaaggca 4588610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 30030151 - 30030277
Alignment:
Q  63 tactcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaac-gtttcattctaaaatctttccacgttcaatctcatgctaaat 161  Q
    |||||| ||||||||||||| |||||||||||||||||| |||| ||| |||||||| ||||||           ||||| |||||||||||| | | ||    
T  30030151 tactcgcgaggcgagagcctctgctcgccatggcgagtt-aggtcagaattccaaactgtttca-----------ttccaggttcaatctcatcccacat 30030238  T
Q  162 gctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
     ||||| |||||||||| |||||||||||| ||||||||    
T  30030239 tctttcgtaatcattattagacatgttcagacactcaaa 30030277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 43927386 - 43927484
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||||| || |||||| ||| ||||||| | ||| |  ||||||  |||| ||||||||||||| | ||||| |||||||||    
T  43927386 ctcacatcaactcgtgcgacaaaggtcacatttatcct-aacaaggtattctgtctcacaagggctcgcgaggcgagagcctctactcgctatggcgagt 43927484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 163 - 201
Target Start/End: Complemental strand, 12171826 - 12171788
Alignment:
Q  163 ctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  12171826 ctttcctaatcattattagacatgttcaggcactcaaaa 12171788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 12399608 - 12399646
Alignment:
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  12399608 tttcctaatcattattagacatgttcaggcactcaaaag 12399646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 14234745 - 14234847
Alignment:
Q  4 acatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttca 103  Q
    ||||||||| || ||||||||||| |||||||||||||||||||| ||| ||||       || | |||||||| |||| | ||||||||||||||||||    
T  14234745 acatcaacttgttcgacaaagatcacatttaacctaaacaaggcattctgtaactggttagcttgcgaggcgagggcctctactcgccatggcgagttca 14234844  T
Q  104 ggt 106  Q
    |||    
T  14234845 ggt 14234847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 324627 - 324685
Alignment:
Q  143 gttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    |||||||||||| ||| |  |||||||||||||||| | |||| |||||||||||||||    
T  324627 gttcaatctcattctacaatctttcctaatcattattatacatattcaggcactcaaaa 324685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 12399519 - 12399561
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggt 106  Q
    ||||| ||||||||||||||| |||||| ||||||||||||||    
T  12399519 actcgtgaggcgagagcctttactcgccgtggcgagttcaggt 12399561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 201
Target Start/End: Complemental strand, 17247229 - 17247191
Alignment:
Q  163 ctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  17247229 ctttcctaatcattattagacatgttccggcactcaaaa 17247191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 22110004 - 22109946
Alignment:
Q  143 gttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    |||||||||||  |||||  ||| |||||||||||| | ||||||||||||||||||||    
T  22110004 gttcaatctcaaactaaaaacttgcctaatcattattatacatgttcaggcactcaaaa 22109946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 198
Target Start/End: Original strand, 42386725 - 42386858
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| |||| |||||||| | |||||||||||||||||||||   | | ||||| |||||||||| || | ||| || |||||||| ||  |||||  |    
T  42386725 actcgcgaggtgagagcctctactcgccatggcgagttcaggtataactcccaaaagtttcattcttaactattt-caggttcaatcacagtctaaagtc 42386823  T
Q  164 tttcctaatcattatgagacatgttcaggcactca 198  Q
    || |||||||||||| |  |||||||| |||||||    
T  42386824 ttgcctaatcattattatgcatgttcatgcactca 42386858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 45797426 - 45797460
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaac 42  Q
    ||||||| |||||||||||||||||||||||||||    
T  45797426 caactcgcgcgacaaagatcgcatttaacctaaac 45797460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 1982624 - 1982584
Alignment:
Q  60 aagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||| |||| ||||||||||| |||||||||||||||||||    
T  1982624 aagtgctcgcgaggcgagagcatttgctcgccatggcgagt 1982584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 111; Significance: 3e-56; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 16407 - 16269
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||| |    
T  16407 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttagatttccaaacgtttcattcgaaaatctttccaggttcaatctcattctaaattc 16308  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  16307 tttcctaatcattattagacatgttcaggcactcaaaag 16269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 28679 - 28479
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||| |||||||||||||||||    
T  28679 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcgagt 28580  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    |||||||  | |||  ||  |||||||||||| ||||   | |||||||||||| ||  |  |||||||||||||||| |||||||||||||||||||||    
T  28579 tcaggtt-cagttcacaaaatttcattctaaagtcttcgtaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaa 28481  T
Q  201 ag 202  Q
    ||    
T  28480 ag 28479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 109; Significance: 5e-55; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 132904 - 133103
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| | | ||| ||||||||||| ||||||||||||| |||||||||||||||||    
T  132904 ctcacatcaactcgtgcgacaaagatcacatttaacctaaacaaggcattatgtaagacaagtactcgcgaggcgagagcctctgctcgccatggcgagt 133003  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    |||||||  | |||  ||  |||||||||||| |||||||| |||||||||||| ||  |  |||||||||||||||| |||||||||||||||||||||    
T  133004 tcaggtt-cagttcacaaaatttcattctaaagtctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaa 133102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 6 - 200
Target Start/End: Complemental strand, 8158 - 7966
Alignment:
Q  6 atcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcagg 105  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||| |||| ||||||||||||| |||||||||||||||||||  |    
T  8158 atcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaacactagtgctcgcgaggcgagagcctctgctcgccatggcgagttc-tg 8060  T
Q  106 ttagatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||||| |||||| |||||||||| || |||||||| |||||||||||| ||| || |||||||||||| ||| |||||||||||||||||||||    
T  8059 ttagattctccaaa-gtttcattct-aagtctttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaa 7966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 2e-54; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 22134085 - 22133887
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| |||||||||||||||||    
T  22134085 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctgtaacacaagtattcgcgaggcgagagcctctgctcgccatggcgagt 22133986  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    |||| | || |  | |||   ||||||||||| |||| | | |||||||||||| ||  |  |||||||||||||||| |||||||||||||||||||||    
T  22133985 tcagttcagttcacaaaa---ttcattctaaagtcttcctaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaa 22133889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 28406230 - 28406430
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | | ||||||||||||| | ||||||||||||| | |||||||||||||||    
T  28406230 ctcacatcaactcgtgcgacaaggatcgcatttaacctaaacaaggcattatgtaacacaagtacttgcgaggcgagagcctctactcgccatggcgagt 28406329  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    |||||||  | |||  ||  ||| |||||||||||||| || |||||||||||| ||  |  |||||||||| ||||| |||||||||||||||||||||    
T  28406330 tcaggtt-cagttcacaaaattttattctaaaatctttacaggttcaatctcattctccaatctttcctaattattattagacatgttcaggcactcaaa 28406428  T
Q  201 ag 202  Q
    ||    
T  28406429 ag 28406430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 70 - 202
Target Start/End: Original strand, 23660342 - 23660473
Alignment:
Q  70 gaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcct 169  Q
    ||||||||||||| |||||||| |||||||||||||| ||||| ||||| |||||||||||||||||||||| |||||||||||| ||| || |||||||    
T  23660342 gaggcgagagcctctgctcgccgtggcgagttcaggtcagatt-ccaaaagtttcattctaaaatctttccaggttcaatctcattctacattctttcct 23660440  T
Q  170 aatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||| |||||||||||||||||||||||    
T  23660441 aatcattattagacatgttcaggcactcaaaag 23660473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 22731041 - 22730903
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||||||||| || |||||||||||||| ||| | ||| | ||||||||||| |||||||||| |||||||||||| ||| || |    
T  22731041 actcgtgaggcgagagcctttgctccccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattc 22730942  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  22730941 tttcctaatcattattagacatgttcaggcactcaaaag 22730903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 70 - 202
Target Start/End: Original strand, 27753894 - 27754026
Alignment:
Q  70 gaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcct 169  Q
    ||||||||||||| |||||||| |||||||||||||| ||| | ||| | ||||||||||| |||||||||| |||||||||||| ||| || |||||||    
T  27753894 gaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattctttcct 27753993  T
Q  170 aatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||| ||||||||| |||||||||||||    
T  27753994 aatcattattagacatgttgaggcactcaaaag 27754026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 298622 - 298485
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| | |||||| |||||||||||||| ||| | ||| | ||||||||||||| |||||||| |||||||||||| ||| || |    
T  298622 actcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattctaaa-tctttccaggttcaatctcatcctatattc 298524  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  298523 tttcctaatcattattagacatgttcaggcactcaaaag 298485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 32451737 - 32451599
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| ||| | ||| | ||||||||||| |||||||||| |||||||||||| ||| || |    
T  32451737 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccatgttcaatctcatcctacattc 32451638  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    | ||||||||||||| | |||||||||||||||||||||    
T  32451637 tctcctaatcattattaaacatgttcaggcactcaaaag 32451599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 23071831 - 23071633
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||||  ||| ||||||| |||| |||||||| |||||| | | ||||||||   |||| ||||||||||||| |||||||||||||||||    
T  23071831 ctcacatcaactcgaacgaaaaagatctcattcaacctaaa-aaggcattttgtaacacaaacgctcgcgaggcgagagcctctgctcgccatggcgagt 23071733  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    || ||| |||||  | ||  |||||||||||  ||||| || |||||||||||| ||| || |||||||||||||||| |||||||||||||||||||||    
T  23071732 tc-ggtcagattctctaaattttcattctaag-tcttttcaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaa 23071635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 22737988 - 22737850
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||||||||||| | ||| | ||| | ||||||||||| |||||||| | |||||||||||| ||| || |    
T  22737988 actcgcgaggcgagagcctctgctcgccgtggcgagttcagttcagaatcccacaagtttcattctacaatctttctaggttcaatctcatcctacattc 22737889  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| ||| |||||||||||||||||||    
T  22737888 tttcctaatcattattagatatgttcaggcactcaaaag 22737850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 23076755 - 23076891
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| | |||||| |||||||||||||| ||| ||||||| ||||||||||||| |||||||| || ||||||||| ||| || |    
T  23076755 actcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaattccaaa-gtttcattctaaa-tctttccaggtccaatctcatcctacattc 23076852  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||| ||||| |||||||||||||||||||||||    
T  23076853 tttcctaattattattagacatgttcaggcactcaaaag 23076891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 22337429 - 22337566
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| | |||||| |||||| ||||||| |||  || ||| ||||||||||||| |||||||| |||||||||||| ||| || |    
T  22337429 actcgcgaggcgagagcctctactcgccgtggcgaattcaggtcagaactcaaaaagtttcattctaaa-tctttccaggttcaatctcatcctacattc 22337527  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||  ||||||||||    
T  22337528 tttcctaatcattattagacatgttcatacactcaaaag 22337566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 37862 - 37797
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||| |||||||||||| ||| ||  ||||||||||||||| |||||||||||||||||||||||    
T  37862 ttccaggttcaatctcatcctacatcttttcctaatcattattagacatgttcaggcactcaaaag 37797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 23286236 - 23286301
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||| |||||||||||| ||| || |||||||||||||||| |||||||||||| ||||||||||    
T  23286236 ttccatgttcaatctcatcctacattctttcctaatcattattagacatgttcagacactcaaaag 23286301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 23654145 - 23654080
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||| |||||||||||| ||| || |||||||||||||||| ||||||||||||||| |||||||    
T  23654145 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcagtcaaaag 23654080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 22459429 - 22459327
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||  ||||||| || |||||||||||| ||||||| ||| |  |||||| ||||| ||||| ||||||| | ||||| |||||||||    
T  22459429 ctcacatcaactcgtaggacaaaggtcacatttaacctaa-caaggcattctgtctcacaaggactcgcgaggcaagagcctctactcgctatggcgagt 22459331  T
Q  101 tcag 104  Q
    ||||    
T  22459330 tcag 22459327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 23791528 - 23791629
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||   ||| |  ||||||  |||| ||||||||||||| | ||||| |||||||||    
T  23791528 ctcacatcaactcgtgcgacaaaggtcacatttaacctaa-caaggtgttctgtctcacaagggctcgcgaggcgagagcctctactcgcgatggcgagt 23791626  T
Q  101 tca 103  Q
    |||    
T  23791627 tca 23791629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 20309480 - 20309545
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||| |||||||||||| ||| || |||||||||||||||| |||||| | ||||||||||||||    
T  20309480 ttccaggttcaatctcatcctacattctttcctaatcattattagacatatccaggcactcaaaag 20309545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 28292027 - 28291972
Alignment:
Q  147 aatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    |||||||| ||| || |||||||||||||| | |||||||||||||||||||||||    
T  28292027 aatctcattctacattctttcctaatcattcttagacatgttcaggcactcaaaag 28291972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 37923 - 37878
Alignment:
Q  65 ctcgggaggcgagagcctttgctcgccatggcgagttcaggttaga 110  Q
    |||| ||||||||||||| |||||||| ||||||||||||||||||    
T  37923 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggttaga 37878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 23207531 - 23207570
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaa 40  Q
    |||||||||||||||||||||||| || ||||||||||||    
T  23207531 ctcacatcaactcgtgcgacaaaggtcacatttaacctaa 23207570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 23286174 - 23286216
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggt 106  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||    
T  23286174 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 23286216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 201
Target Start/End: Original strand, 25176254 - 25176292
Alignment:
Q  163 ctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  25176254 ctttcctaatcataattagacatgttcaggcactcaaaa 25176292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 7600 - 7556
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaag 45  Q
    |||||||||||||||||||||||| || |||| ||||||| ||||    
T  7600 ctcacatcaactcgtgcgacaaaggtcacattaaacctaaccaag 7556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 25109145 - 25109181
Alignment:
Q  4 acatcaactcgtgcgacaaagatcgcatttaacctaa 40  Q
    ||||||||||||||||||||| || ||||||||||||    
T  25109145 acatcaactcgtgcgacaaaggtcacatttaacctaa 25109181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 3e-53; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 12774250 - 12774448
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||    
T  12774250 ctcacatcaactcgtgcgacaaggatcgcatttaacctaaacaaggcagtctgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcgagt 12774349  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    |||||||   ||  ||||   ||||||||||  ||| |||| |||||||||||| ||  |  |||| ||||||||||| |||||||||||||||||||||    
T  12774350 tcaggttcagttcacaaa--attcattctaacgtctctccaggttcaatctcattctccaatcttttctaatcattattagacatgttcaggcactcaaa 12774447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 8 - 200
Target Start/End: Original strand, 24029000 - 24029190
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcaggtt 107  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||| || ||| |||| ||||||||||||| |||||||||||||||||||| ||     
T  24029000 caactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctctgctcgccatggcgagttca-gtc 24029098  T
Q  108 agatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||| |||||| |||||||||| || |||||||| |||||||||||| ||| || ||||| |||||| ||| |||||||||||||||||||||    
T  24029099 agattctccaaa-gtttcattct-aagtctttccaggttcaatctcatcctacattctttcataatcaatattagacatgttcaggcactcaaa 24029190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 12 - 199
Target Start/End: Complemental strand, 22634071 - 22633886
Alignment:
Q  12 tcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcaggttagat 111  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||| ||||||||||||| ||||||||||||||||||||  |  |||    
T  22634071 tcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaacacaagtgctcgcgaggcgagagcctctgctcgccatggcgagttca-atctgat 22633973  T
Q  112 t-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    | |||||| |||||||||| || |||||||| |||||||||||| ||| || |||||||||||| ||| ||||||||||||||||||||    
T  22633972 tatccaaa-gtttcattct-aagtctttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaa 22633886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 14038962 - 14039100
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||||||||| ||| ||||||||||| |||||||||||||||||||| | |||||||||||| ||| || |    
T  14038962 actcgcgaggcgagagcctctgctcgccgtggcgagttctggtcagatttccaaaagtttcattctaaaatctttctaggttcaatctcattctacattc 14039061  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  14039062 tttccaaatcattattagacatgttcaggcactcaaaag 14039100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 8 - 200
Target Start/End: Complemental strand, 20157152 - 20156962
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcaggtt 107  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||| || ||| |||| ||||||||||||| ||| |||||||||||||||| ||     
T  20157152 caactcgtgcgacaaagatcgcatttaacctaaacaaggcactctgtaatactagtgctcgcgaggcgagagcctctgcacgccatggcgagttca-gtc 20157054  T
Q  108 agatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    | ||| | |||| |||||||||| ||  ||||||| |||||||||||| ||| || |||||||||||| ||| |||||||||||||||||||||    
T  20157053 atattcttcaaa-gtttcattct-aagcctttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaa 20156962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 64 - 201
Target Start/End: Complemental strand, 44928730 - 44928594
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||| ||||| ||||| |||||||||||||||||||||| |||||||||||| ||| || |    
T  44928730 actcgcgaggcgagagcctctgctcgccatggcgagttctggtcagattcccaaa-gtttcattctaaaatctttccaggttcaatctcattctacattc 44928632  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  44928631 tttcctaatcattattagatatgttcaggcactcaaaa 44928594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 15091210 - 15091348
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||||||||||| ||||| |||||||||||| ||| || |    
T  15091210 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaaatccttccaggttcaatctcattctacattc 15091309  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||| ||| ||||||||||||  |||||||||    
T  15091310 tttcctaatcaatattagacatgttcagaaactcaaaag 15091348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 8 - 200
Target Start/End: Complemental strand, 13812671 - 13812481
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcaggtt 107  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||| ||| || ||| |||| ||||||||||||| |||||||||||||||||| | ||     
T  13812671 caactcgtgcgacaaagatcacatttaacctaaacaaagcattctgtaatactagtgctcgcgaggcgagagcctctgctcgccatggcgagttta-gtc 13812573  T
Q  108 agatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||| |||||| |||||||||| || |||||||| |||||||||||| ||| ||  ||||||||||| ||| |||||||||||| ||||||||    
T  13812572 agattctccaaa-gtttcattct-aagtctttccaggttcaatctcatcctacattatttcctaatcaatattagacatgttcagacactcaaa 13812481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 8846625 - 8846825
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagta-ctcgggaggcgagagcctttgctcgccatggcgag 99  Q
    |||||||||||||||||||||||||||||||||||| |||||||| || ||| ||||  |  || |||| ||||||||||||| | ||||||||||||||    
T  8846625 ctcacatcaactcgtgcgacaaagatcgcatttaacataaacaagacattctgtaact-agttagctcgcgaggcgagagcctctactcgccatggcgag 8846723  T
Q  100 ttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    || ||||   | |  ||||   |||||||||||||||||||| |||||||||||| ||  |  |||||||||||||||| ||||||||||||| ||||||    
T  8846724 ttaaggtgcaactcacaaaaaattcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggtactcaa 8846823  T
Q  200 aa 201  Q
    ||    
T  8846824 aa 8846825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 3332144 - 3332287
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcaggtt 107  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| ||| || ||| |||| ||||||||||||| |||||||||||||||||||| ||     
T  3332144 caactcatgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctctgctcgccatggcgagttca-gtc 3332242  T
Q  108 agatt-tccaaacgtttcattctaaaatctttccacgttcaatctca 153  Q
    ||||| |||||| |||||||||| || |||||||| |||||||||||    
T  3332243 agattctccaaa-gtttcattct-aagtctttccaggttcaatctca 3332287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 16596898 - 16597096
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||||  ||||||||||| |||| |||||||| |||||| ||| ||||||||   | || | ||||||| ||| | |||||||||||||||    
T  16596898 ctcacatcaactcgaacgacaaagatcacattcaacctaaa-aaggcattctgtaacacaaacgcccgcggggcgagaacctctactcgccatggcgagt 16596996  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    || ||| |||||  | ||  |||||||||||  |||||||| |||||||||||| ||| || |||||||||||||||| |||||||||||||||||||||    
T  16596997 tc-ggtcagattctctaaattttcattctaag-tctttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaa 16597094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 15552066 - 15552264
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||||  ||||||||||||||||| ||||||| ||| || | | |||||| | | |||| |||||| |||||| |||||||| ||||||||    
T  15552066 ctcacatcaactcgaacgacaaagatcgcattttacctaaa-aagacattttgtaacaccaatgctcgcgaggcgcgagcctctgctcgccgtggcgagt 15552164  T
Q  101 tcaggttagatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    || ||| ||||| ||||||  ||| |||||||  |||||||| || ||||||||| ||| || |||||||||||||||| ||||||||||||||||||||    
T  15552165 tc-ggtcagattctccaaat-tttgattctaag-tctttccaggtccaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaa 15552261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 7799010 - 7799148
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| ||| | | | | ||||||||||| || ||||||| |||||||||||| ||| ||      
T  7799010 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatactacaagtttcattctacaaactttccaggttcaatctcatcctacatta 7799109  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    | ||||||||||||| || ||||||||||||||||||||    
T  7799110 tgtcctaatcattattagtcatgttcaggcactcaaaag 7799148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 16377329 - 16377192
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| ||||| ||||| ||| |||||||  ||| ||||| |||||||||||| ||| ||      
T  16377329 actcgtgaggcgagagcctctgctcgccgtggcgagttcaggtcagattcccaaaagtt-cattctacgatcattccaggttcaatctcatcctacatta 16377231  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||| | ||||||||    
T  16377230 tttcctaatcattattagacatgttcagacgctcaaaag 16377192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 22636747 - 22636885
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| ||||||| ||| || ||| | ||| | ||||||||||| ||| |||||| |||||||||||| ||| || |    
T  22636747 actcgtgaggcgagagcctctgctcgccgtggcgaggtcaagtcagaatcccacaagtttcattctacaatttttccaggttcaatctcatcctacattc 22636846  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||| ||||| ||||||||||    
T  22636847 tttcctaatcattattagacatcttcagacactcaaaag 22636885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 44053142 - 44053280
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| |||||||||| || |||||||| |||||||||||||| ||| | ||| | ||||||| ||| ||||||| || |||||||||||| ||| || |    
T  44053142 actcgcgaggcgagagtctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcatcctataatctttacaggttcaatctcatcctacattc 44053241  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||| ||||||||| |||||||||||| ||||||||||    
T  44053242 tttcccaatcattattagacatgttcagacactcaaaag 44053280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 44102524 - 44102660
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| ||||||||||||||||||||||| |||||  |||| |||| |||||||||||| |||| |||||||||||| ||| || |    
T  44102524 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattctcaaa-gttttattctaaaatctatccaggttcaatctcatcctacattc 44102622  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
     ||| |||||||||| | ||||| |||||||||||||||    
T  44102623 -ttcataatcattattaaacatgctcaggcactcaaaag 44102660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 94 - 202
Target Start/End: Complemental strand, 16239769 - 16239662
Alignment:
Q  94 ggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatg-ctttcctaatcattatgagacatgttcagg 192  Q
    ||||||||||||||||| | ||| | ||||||||||||| |||||||| |||||||||||| ||| ||  |||||||||||||||| |||||||||||||    
T  16239769 ggcgagttcaggttagaat-ccacaagtttcattctaaa-tctttccaggttcaatctcattctacatttctttcctaatcattattagacatgttcagg 16239672  T
Q  193 cactcaaaag 202  Q
    ||||||||||    
T  16239671 cactcaaaag 16239662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 120 - 202
Target Start/End: Original strand, 6190802 - 6190884
Alignment:
Q  120 gtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||| |||||||||| |||||||||||| ||| || || ||||||||||||| | |||||||||||||||||||||    
T  6190802 gtttcattctacaatctttccaggttcaatctcatcctacattctctcctaatcattattaaacatgttcaggcactcaaaag 6190884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 64 - 198
Target Start/End: Original strand, 7089190 - 7089313
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| ||||||||||||||||||||||| ||| | ||| | |||||||||           || |||||||||||| ||| || |    
T  7089190 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccataagtttcattc-----------caggttcaatctcatcctacattc 7089278  T
Q  164 tttcctaatcattatgagacatgttcaggcactca 198  Q
    ||||||||||||||| |||||||||||||||||||    
T  7089279 tttcctaatcattattagacatgttcaggcactca 7089313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 15190568 - 15190667
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||       |||| ||||||||||||| | |||||||||||||||    
T  15190568 ctcacatcaactcgtgcgacaaagatcgcttttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcgagt 15190667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 39706157 - 39705959
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||        ||| |||||||| |||| | |||||||||||||||    
T  39706157 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagt 39706058  T
Q  101 tcaggt-tagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    |||||| ||  | || |||   ||| |||| |||   ||||| ||||||||| |  ||  |  |||||||||||||||| ||||||||||||||||||||    
T  39706057 tcaggtgtaactctcaaaa---ttcgttcttaaactattccaggttcaatcttaatcttcaatctttcctaatcattattagacatgttcaggcactcaa 39705961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 15099601 - 15099706
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||| || ||| ||||       |||| ||||||||||||| | |||||||||||||||    
T  15099601 ctcacatcaactcatgcgacaaagatcgcttttaacctaaacaagacattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcgagt 15099700  T
Q  101 tcaggt 106  Q
    ||||||    
T  15099701 tcaggt 15099706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 64 - 197
Target Start/End: Original strand, 3096956 - 3097078
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| ||| | ||| | |||||||||           || |||||||||||| ||| || |    
T  3096956 actcgcgaggcgagagcctctgctcgccttggcgagttcaggtcagaatcccacaagtttcattc-----------caggttcaatctcatcctacattc 3097044  T
Q  164 tttcctaatcattatgagacatgttcaggcactc 197  Q
    ||||||||||||||| ||||||||||||||||||    
T  3097045 tttcctaatcattattagacatgttcaggcactc 3097078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 12903132 - 12903195
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||| |||||||||||| ||| || |||||||||||||||| |||||||||||||||||||||    
T  12903132 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaa 12903195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 14053048 - 14052983
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||| |||||||||||| ||| || |||||||||||||||| |||||| ||||||||||||||||    
T  14053048 ttccaagttcaatctcatcctacattctttcctaatcattattagacatattcaggcactcaaaag 14052983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 64 - 200
Target Start/End: Complemental strand, 17047880 - 17047756
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| ||||||||||||||||||||||| ||| | ||| | ||||||||| |            |||||||||||| ||| ||      
T  17047880 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattcca------------gttcaatctcatcctacattt 17047793  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||||||||||||| || ||||||||||||||||||    
T  17047792 tttcctaatcattattagtcatgttcaggcactcaaa 17047756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 21815109 - 21814973
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| | |||||||||||||||||| || || || | ||| ||| |||||| || |  | ||| ||||| | |||| |||||| |    
T  21815109 actcgcgaggcgagagcctctactcgccatggcgagttcaagtcagcttccaaaaagtt-cattcttaattaat-ccaggttcattatcattctaaattc 21815012  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| | |||||||||| ||||||||||    
T  21815011 tttcctaatcattattaaacatgttcagacactcaaaag 21814973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 21815438 - 21815302
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| | ||||||||||||||||||||| ||  |||||||   ||||||||  |||   |||| ||||| | |||| ||||||      
T  21815438 actcgcgaggcgagagcctctactcgccatggcgagttcaggtcag-cttccaaaaagttcattct-taattaatccaggttcattatcattctaaatta 21815341  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| | |||||||||| ||||||||||    
T  21815340 tttcctaatcattattaaacatgttcagacactcaaaag 21815302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 21818531 - 21818395
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| | |||||||||||||||||| || || || | ||| ||| |||||| || |  | ||| ||||| | |||| |||||| |    
T  21818531 actcgcgaggcgagagcctctactcgccatggcgagttcaagtcagcttccaaaaagtt-cattcttaattaat-ccaggttcattatcattctaaattc 21818434  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| | |||||||||| ||||||||||    
T  21818433 tttcctaatcattattaaacatgttcagacactcaaaag 21818395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 43198323 - 43198259
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    ||||| |||||||||||  |||||  |||||||||||||||| | ||||||||||||||||||||    
T  43198323 ttccatgttcaatctcaatctaaaatctttcctaatcattattacacatgttcaggcactcaaaa 43198259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 43198423 - 43198384
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaa 40  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  43198423 ctcacatcaactcgtgtgacaaagatcgcatttaacctaa 43198384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 200
Target Start/End: Original strand, 17046728 - 17046765
Alignment:
Q  163 ctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    |||||||||||||||| |||||||||||||||||||||    
T  17046728 ctttcctaatcattattagacatgttcaggcactcaaa 17046765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 53082018 - 53081915
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||||  || |||||||||||| |||||   ||| |  ||||||  |||| || |||||||||| | ||||| |||||||||    
T  53082018 ctcacatcaactcgtgcgacaaatgtcacatttaacctaa-caaggtgttctgtctcacaagggctcgcgacgcgagagcctctactcgctatggcgagt 53081920  T
Q  101 tcagg 105  Q
    |||||    
T  53081919 tcagg 53081915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 7894014 - 7894077
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcatt 127  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| ||| | ||| | ||||||||    
T  7894014 actcgtgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcatt 7894077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 46640324 - 46640285
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaa 40  Q
    |||||||||||||||||||||||| || ||||||||||||    
T  46640324 ctcacatcaactcgtgcgacaaaggtcacatttaacctaa 46640285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 15464658 - 15464600
Alignment:
Q  143 gttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    |||||||||||  |||||  |||||||||||||||| | |||| |||||||||||||||    
T  15464658 gttcaatctcaatctaaaatctttcctaatcattattatacatattcaggcactcaaaa 15464600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 15868364 - 15868306
Alignment:
Q  143 gttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    |||||||||||  |||||  |||||||||||||||| | |||| |||||||||||||||    
T  15868364 gttcaatctcaatctaaaaactttcctaatcattattatacatattcaggcactcaaaa 15868306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 197
Target Start/End: Complemental strand, 52243000 - 52242868
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| | ||||| |||||||||||||||   | | |||| |  | |||||| |||   ||||| |||||||||||| ||| |  |    
T  52243000 actcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaactcccaa-caatgcattcttaaactattccaggttcaatctcattctagaatc 52242902  T
Q  164 tttcctaatcattatgagacatgttcaggcactc 197  Q
    |||||| |||||||| | ||||||||||||||||    
T  52242901 tttcctgatcattattatacatgttcaggcactc 52242868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 106
Target Start/End: Complemental strand, 23374161 - 23374125
Alignment:
Q  70 gaggcgagagcctttgctcgccatggcgagttcaggt 106  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  23374161 gaggcgagagcctctgctcgccgtggcgagttcaggt 23374125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 32851642 - 32851674
Alignment:
Q  16 gcgacaaagatcgcatttaacctaaacaaggca 48  Q
    ||||||||||||||||||||||||||| |||||    
T  32851642 gcgacaaagatcgcatttaacctaaaccaggca 32851674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 6 - 201
Target Start/End: Original strand, 32339 - 32533
Alignment:
Q  6 atcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcagg 105  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | | ||||||||||||||| |||| |||||||| ||||||||||||||||||||||    
T  32339 atcaactagtgcgacaaagatcgcatttaacctaaacaaggcattatgtaacacaagtactcgcgaggtgagagcctctgctcgccatggcgagttcagg 32438  T
Q  106 ttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    ||  | |||  ||  |||||||||||| |||||||| |||||||||||| ||  |  |||||||||||||||| ||||||||||||||||||||||    
T  32439 tt-cagttcacaaaatttcattctaaagtctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaa 32533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 102; Significance: 7e-51; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 101646 - 101844
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||  ||||| ||||||| |||||||||||||||||    
T  101646 ctcacatcaactcgtgcgacaaggatcacatttaacctaaacaagacagtctataacacaagtactcccgaggcaagagcctctgctcgccatggcgagt 101745  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    |||||| |  ||  ||||   ||||||||||| ||| |||| |||||||||||| ||  |  |||||||||||||||| |||||||||||||||||||||    
T  101746 tcaggtcaagttcacaaa--attcattctaaagtctctccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaa 101843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 100628 - 100708
Alignment:
Q  2 tcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcct 82  Q
    ||||||||||||||||||||||||||||||||||| || |||||||| | | ||||||||||||||| |||||| ||||||    
T  100628 tcacatcaactcgtgcgacaaagatcgcatttaacttagacaaggcattttgtaacacaagtactcgcgaggcgggagcct 100708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 40042 - 39995
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggca 48  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  40042 ctcacatcaactcgtgcaacaaagatcgcatttaacctaaataaggca 39995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 7e-51; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 8 - 200
Target Start/End: Complemental strand, 22120055 - 22119865
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcaggtt 107  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||| || ||| |||| ||||||||||||| |||||||||||||||||||| ||     
T  22120055 caactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctctgctcgccatggcgagttca-gtc 22119957  T
Q  108 agatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||| |||||| |||||||||| || |||||||| |||||||||||| ||| || |||||||||||| ||| |||||||||||||||||||||    
T  22119956 agattctccaaa-gtttcattct-aagtctttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaa 22119865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 8 - 200
Target Start/End: Complemental strand, 24767199 - 24767009
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcaggtt 107  Q
    |||||||||||||||||||| |||||||||||||||||||| ||| ||| || ||| |||| ||||||||||||| ||||||||||| |||||||| ||     
T  24767199 caactcgtgcgacaaagatcacatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctctgctcgccatgacgagttca-gtc 24767101  T
Q  108 agatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||| |||||| |||||||||| || ||||||||  ||||||||||| ||| || ||||| |||||| ||| |||||||||||||||||||||    
T  24767100 agattctccaaa-gtttcattct-aagtctttccagattcaatctcatcctacattctttcgtaatcaatattagacatgttcaggcactcaaa 24767009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 19660706 - 19660507
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||||  |||||||||| ||||| |||||||| |||||  ||| ||||||||   |||| ||||||||||||| |||||||||||||||||    
T  19660706 ctcacatcaactcgaacgacaaagattgcattcaacctaaa-aaggcgttctgtaacacaaacgctcgcgaggcgagagcctctgctcgccatggcgagt 19660608  T
Q  101 tcaggttagatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    || ||||||||| ||||||  |||||||||||  |||||||| ||| |||||||| | | || |||||||||||||||| ||||||||||||||||||||    
T  19660607 tc-ggttagattctccaaagttttcattctaag-tctttccaggtttaatctcattccacattctttcctaatcattattagacatgttcaggcactcaa 19660510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 9078266 - 9078403
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| ||| ||| ||| ||||||||||||| |||||||| |||||||||||| ||| ||      
T  9078266 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattcaaaaggtttcattctaaa-tctttccaggttcaatctcattctacattt 9078364  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  9078365 tttcctaatcattattagacatgttcaggcactcaaaag 9078403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 11581052 - 11580915
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| ||||||||||||||||||||||| |||||  |||| |||| |||||||||||| |||| |||||||||||| ||| || |    
T  11581052 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattctcaaa-gttttattctaaaatctatccaggttcaatctcattctacattc 11580954  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  11580953 tttcctaatcattattaaacatgttcaggcactcaaaag 11580915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 21985954 - 21985817
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| |||||||| |||| |||| ||| |||||||||||||| ||| ||||||| ||||||||||||| |||||||| |||||||||||| ||| || |    
T  21985954 actcgcgaggcgagggcctctgcttgccgtggcgagttcaggtcagaattccaaaagtttcattctaaa-tctttccaggttcaatctcattctacattc 21985856  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  21985855 tttcctaatcattattagacatgttcaggcactcaaaag 21985817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 23390304 - 23390166
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||| ||||| | ||||||||||||||||||||| ||| | ||| | ||||||||||| |||||||||| |||||||||||| ||| || |    
T  23390304 actcgtgaggcgatagcctctactcgccatggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattc 23390205  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  23390204 tttcctaatcattattagacatgttcaggcactcaaaag 23390166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 24529534 - 24529672
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||||||||||| | ||| ||||||| ||||||||||| || ||||||| |||||||||||| ||| || |    
T  24529534 actcgcgaggcgagagcctctgctcgccgtggcgagttcagatcagaattccaaaagtttcattctacaacctttccaggttcaatctcatcctacattc 24529633  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| ||||||||||||||||| |||||    
T  24529634 tttcctaatcattattagacatgttcaggcactgaaaag 24529672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 1096781 - 1096918
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| | |||||| |||||||||||||| ||||||||||| ||| ||||||  ||||||||||  ||||||||||| ||| || |    
T  1096781 actcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagatttccaaaagtt-cattctgcaatctttccagattcaatctcatcctacattc 1096879  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  1096880 tttcctaatcattattagacatgttcaggcactcaaaag 1096918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 21565795 - 21565994
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagta-ctcgggaggcgagagcctttgctcgccatggcgag 99  Q
    ||||||||||||||||||||||||||||||||| || |||||||| || ||| ||||  |  || |||  ||||||||||||| ||||||||||||||||    
T  21565795 ctcacatcaactcgtgcgacaaagatcgcattttacataaacaagtcattctgtaact-agttagctcacgaggcgagagcctctgctcgccatggcgag 21565893  T
Q  100 ttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    |||||||   |||  | ||  || |||||||||||||||||| |||||||||||| ||  |  |||||||||||||||| ||||||||||||||||||||    
T  21565894 ttcaggtacaattcacgaaaatt-cattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaa 21565992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 25421846 - 25421983
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| | |||||| ||||||||||| || |||||||| || ||||||||||||| |||||||| || ||||||||| |||| | |    
T  25421846 actcgcgaggcgagagcctctactcgccgtggcgagttcaagtcagatttccgaaagtttcattctaaa-tctttccaggtccaatctcatcctaagttc 25421944  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  25421945 tttcctaatcattaatagacatgttcaggcactcaaaag 25421983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 25431708 - 25431845
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| |||| |||||||| | |||||| ||||||||||| || ||||||||||| ||||||||||||| |||||||| || ||||||||| |||||| |    
T  25431708 actcgcgaggtgagagcctctactcgccgtggcgagttcaagtcagatttccaaaagtttcattctaaa-tctttccaggtccaatctcatcctaaattc 25431806  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||  | |||||||||||||||||||||    
T  25431807 tttcctaatcattaataaacatgttcaggcactcaaaag 25431845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 36154635 - 36154498
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| | ||||||||||||||||||||| |||||  |||| |||| |||||||||||| |||| |||||||||||  ||| || |    
T  36154635 actcgcgaggcgagagcctctactcgccatggcgagttcaggtcagattctcaaa-gttttattctaaaatctatccaggttcaatctcactctacattc 36154537  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  36154536 tttcctaatcattattagacatgttcaagcactcaaaag 36154498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 22959403 - 22959204
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagta-ctcgggaggcgagagcctttgctcgccatggcgag 99  Q
    |||||||||||| |||| ||||  |||||||||||||||||||||||| ||| ||||  |  || |||| ||||||||||||| | ||||||||||||||    
T  22959403 ctcacatcaacttgtgcaacaagaatcgcatttaacctaaacaaggcattctgtaact-agttagctcgcgaggcgagagcctctactcgccatggcgag 22959305  T
Q  100 ttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    ||||||||   ||  ||||  || ||||||||| ||| |||| |||||||||||| ||  |  |||||||||||||||| ||||||||||||||||||||    
T  22959304 ttcaggttcagttcacaaaaatt-cattctaaagtctctccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaa 22959206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 70 - 202
Target Start/End: Original strand, 24493888 - 24494019
Alignment:
Q  70 gaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcct 169  Q
    ||||||| ||||| |||||||| |||||||||||||| ||| | | ||| ||||||||||||| |||||||| |||||||||||| ||| || |||||||    
T  24493888 gaggcgaaagcctctgctcgccgtggcgagttcaggtcagaatccaaaaagtttcattctaaa-tctttccaggttcaatctcatcctacattctttcct 24493986  T
Q  170 aatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||| ||||||||||||||  |||||||    
T  24493987 aatcattattagacatgttcaggcgttcaaaag 24494019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 13025624 - 13025761
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| |||||||| ||||||||||||  |||||||||||||| ||| | ||| | ||||||||||||| |||||||| || ||||||||| ||| || |    
T  13025624 actcgcgaggcgagggcctttgctcgctgtggcgagttcaggtcagaatcccacaagtttcattctaaa-tctttccaggtccaatctcatcctacattc 13025722  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| ||||||||||||||  |||||||    
T  13025723 tttcctaatcattattagacatgttcaggctttcaaaag 13025761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 13095808 - 13095945
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| |||||||| |||| |||||||  |||||||||||||| ||| | ||| | ||||||||||||| |||||||| || ||||||||| ||| || |    
T  13095808 actcgcgaggcgagggcctctgctcgctgtggcgagttcaggtcagaatcccacaagtttcattctaaa-tctttccaggtccaatctcatcctacattc 13095906  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| ||||||||||||||  |||||||    
T  13095907 tttcctaatcattattagacatgttcaggctttcaaaag 13095945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 19669150 - 19669350
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagta-ctcgggaggcgagagcctttgctcgccatggcgag 99  Q
    |||||||||||| |||||||||  ||| |||||| ||||||||||||| ||| ||||  |  || || | ||||||||||||| | | ||||||||||||    
T  19669150 ctcacatcaacttgtgcgacaagaatcacatttatcctaaacaaggcattctgtaact-agttagctggtgaggcgagagcctctacacgccatggcgag 19669248  T
Q  100 ttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    |||||||   |||  ||||   ||||||||||| ||||||||||||||||||||| |   |  |||||||||||||||| |||||||||||| |||||||    
T  19669249 ttcaggtacaattcacaaaaaattcattctaaagtctttccacgttcaatctcattccccaatctttcctaatcattattagacatgttcagacactcaa 19669348  T
Q  200 aa 201  Q
    ||    
T  19669349 aa 19669350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 21329365 - 21329166
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagt-actcgggaggcgagagcctttgctcgccatggcgag 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||  | || | ||| ||||||||||||| | ||||| ||||||||    
T  21329365 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaac-taggtaattcgcgaggcgagagcctctactcgctatggcgag 21329267  T
Q  100 ttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    |||| ||   | | |||||   |||||||  ||||  ||||| |||||||||||  ||| |  |||| |||||||| |  ||||||||||||||||||||    
T  21329266 ttcaagtgcaactcccaaa-aattcattcctaaattattccaggttcaatctcaatctagaatcttttctaatcataactagacatgttcaggcactcaa 21329168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 13 - 201
Target Start/End: Complemental strand, 5889033 - 5888846
Alignment:
Q  13 cgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagta-ctcgggaggcgagagcctttgctcgccatggcgagttcaggttagat 111  Q
    |||||||||||||||||||||||||||||||||||| ||| ||| |   ||| |||| ||||||||||||| | |||||||||||||||||||||   |     
T  5889033 cgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaa-atgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaac 5888935  T
Q  112 ttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    |  |||| | |||||||| |||   ||||| |||||||||||  ||| |  ||||||||||||| || | ||| ||||||||||||||||    
T  5888934 tcacaaa-gattcattcttaaactattccatgttcaatctcaatctacaatctttcctaatcatcatcatacaagttcaggcactcaaaa 5888846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 21292778 - 21292651
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| ||| ||||| | |||| ||||           || |||||||||||| ||| || |    
T  21292778 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccacaagtttaattc-----------caggttcaatctcatcctacattc 21292690  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||| ||||| |||||||||||||||||||||||    
T  21292689 tttcctaattattattagacatgttcaggcactcaaaag 21292651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 25743973 - 25744074
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||||| || |||  | ||||| ||||||||||| | || ||||  |||| ||||||||||||| | |||||||||||||||    
T  25743973 ctcacatcaactcgtgcgacaaaggtcacataaaccctaa-caaggcagtctgtcactcaagggctcgcgaggcgagagcctctactcgccatggcgagt 25744071  T
Q  101 tca 103  Q
    |||    
T  25744072 tca 25744074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 21741413 - 21741308
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| || | | ||||       |||  ||||||||||||| | |||||||||||||||    
T  21741413 ctcacatcaactcgtgcgacaaagatcgcttttaacctaaacaagacattatgtaactggttagctcacgaggcgagagcctctactcgccatggcgagt 21741314  T
Q  101 tcaggt 106  Q
    ||||||    
T  21741313 tcaggt 21741308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 202
Target Start/End: Complemental strand, 21871365 - 21871241
Alignment:
Q  77 gagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcatt 176  Q
    |||||| | ||||||||||||||| ||||| ||| |  |||| ||  ||||| | |||||||||| |||||||||||| ||| |  ||||||||||||||    
T  21871365 gagcctctactcgccatggcgagtacaggtcagaatcacaaaagtc-cattccataatctttccaggttcaatctcatcctacactctttcctaatcatt 21871267  T
Q  177 atgagacatgttcaggcactcaaaag 202  Q
    |  | |||||||||||||||||||||    
T  21871266 aataaacatgttcaggcactcaaaag 21871241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 202
Target Start/End: Complemental strand, 21875645 - 21875521
Alignment:
Q  77 gagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcatt 176  Q
    |||||| | ||||||||||||||| ||||| ||| |  |||| ||  ||||| | |||||||||| |||||||||||| ||| |  ||||||||||||||    
T  21875645 gagcctctactcgccatggcgagtacaggtcagaatcacaaaagtc-cattccataatctttccaggttcaatctcatcctacactctttcctaatcatt 21875547  T
Q  177 atgagacatgttcaggcactcaaaag 202  Q
    |  | |||||||||||||||||||||    
T  21875546 aataaacatgttcaggcactcaaaag 21875521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 26011903 - 26011799
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||| |||||||||| |||||||||||| ||| ||| ||| ||||   |  ||||| |||||||  |||| | |||||||||||||||    
T  26011903 ctcacatcaactcgtgtgacaaagatcacatttaacctaa-caaagcattctgtaactagacaactcgcgaggcgaaggcctctactcgccatggcgagt 26011805  T
Q  101 tcaggt 106  Q
    ||||||    
T  26011804 tcaggt 26011799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 8286588 - 8286525
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||| |||||||||||| ||| || ||||| |||||||||| |||||||||| ||||||||||    
T  8286588 ttccaggttcaatctcatcctacattctttcttaatcattattagacatgttccggcactcaaa 8286525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 20026808 - 20026706
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||| ||||||||||||| | || ||||||| |||| ||||||| ||| |  |||||| ||||| ||||||||||||| | |||||  ||||||||    
T  20026808 ctcacatcgactcgtgcgacaacggtcacatttaagctaa-caaggcattctgtctcacaaggactcgcgaggcgagagcctctactcgctgtggcgagt 20026710  T
Q  101 tcag 104  Q
    ||||    
T  20026709 tcag 20026706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 22075394 - 22075459
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||| ||||| | |||| ||| || ||| |||||||||||| |||||||||||||||||||||||    
T  22075394 ttccaggttcattttcatcctacattcttacctaatcattattagacatgttcaggcactcaaaag 22075459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 22107113 - 22107056
Alignment:
Q  143 gttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    |||||||||| | ||| || |||||||||||| ||| |||||||||||||||||||||    
T  22107113 gttcaatctcgtcctacattctttcctaatcaatattagacatgttcaggcactcaaa 22107056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 201
Target Start/End: Original strand, 22144364 - 22144500
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| | ||||| |||||||||||||||   | | |||||  |  |||||| ||||  ||||| |||||||||||  ||| |  |    
T  22144364 actcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaactcccaaaaatc-cattcttaaattattccaggttcaatctcaatctagaatc 22144462  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    ||||||||||||| | | ||||||||||||||||||||    
T  22144463 tttcctaatcattgttacacatgttcaggcactcaaaa 22144500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 20026592 - 20026534
Alignment:
Q  143 gttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    |||||||||||  |||||  ||| |||||||||||| | ||||||||||||||||||||    
T  20026592 gttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcaaaa 20026534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 21502019 - 21501919
Alignment:
Q  4 acatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttca 103  Q
    |||||||||||||||||||| |||||||||||||  ||||||||| |||  |||      ||||| ||||||||||||| | ||||| ||||||||||||    
T  21502019 acatcaactcgtgcgacaaatatcgcatttaacc-caacaaggcattct-gaactgggtaactcgcgaggcgagagcctctactcgctatggcgagttca 21501922  T
Q  104 ggt 106  Q
    |||    
T  21501921 ggt 21501919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 22075332 - 22075374
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggt 106  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||    
T  22075332 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 22075374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 22107181 - 22107139
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggt 106  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||    
T  22107181 actcgcgaggcgagagcctctgctcgccatggtgagttcaggt 22107139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 14079454 - 14079494
Alignment:
Q  60 aagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||| |||| ||||||||||| |||||||||||||||||||    
T  14079454 aagtgctcgcgaggcgagagcatttgctcgccatggcgagt 14079494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 31342409 - 31342453
Alignment:
Q  60 aagtactcgggaggcgagagcctttgctcgccatggcgagttcag 104  Q
    |||| |||| ||||||||||| | |||||||||||||||||||||    
T  31342409 aagtgctcgcgaggcgagagcatctgctcgccatggcgagttcag 31342453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 2672 - 2473
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||| |||| |||||  ||||||||||||| ||| ||||||||||||||| ||||||||||||| | |||||||||||||||    
T  2672 ctcacatcaactcgtgcgacaaggatcacatttttcctaaacaaggcattctgtaacacaagtactcgcgaggcgagagcctctactcgccatggcgagt 2573  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    |||||||   ||  ||||  |||||||||||||||||| || |||||| ||||| ||  |  |||||||||||||||| ||||||||||||| |||||||    
T  2572 tcaggttcagttcacaaa--tttcattctaaaatctttacaggttcaaactcattctccaatctttcctaatcattattagacatgttcaggtactcaaa 2475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 94; Significance: 4e-46; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 64 - 201
Target Start/End: Complemental strand, 1884 - 1748
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| ||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| |||||||||||| ||| || |    
T  1884 actcgcgaggcgagagcctctgctcgccatggcgaattcaggtcagatttccaaa-gtttcattctaaaatctttccaggttcaatctcattctacattc 1786  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  1785 tttcctaatcattattagacatgttcaggcactcaaaa 1748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 94; Significance: 4e-46; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 8 - 200
Target Start/End: Original strand, 10169 - 10359
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcaggtt 107  Q
    |||||||| |||||||||||||||||||||||||||||||| ||| |||||||||| |||| ||||||||||||| |||||||||||||||||||| ||     
T  10169 caactcgtacgacaaagatcgcatttaacctaaacaaggcattctgtaacacaagtgctcgcgaggcgagagcctctgctcgccatggcgagttca-gtc 10267  T
Q  108 agatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||| |||||| ||||| |||| || |||||||| |||||||||||| ||| || |||||||||||| ||  ||||||||| |||||||||||    
T  10268 agattctccaaa-gtttccttct-aagtctttccaggttcaatctcatcctacattctttcctaatcaataatagacatgtttaggcactcaaa 10359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 4e-46; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 8 - 200
Target Start/End: Complemental strand, 39267508 - 39267318
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcaggtt 107  Q
    |||||||||||||||||||| |||||||||||||||||||| ||| ||| || ||| |||  ||||||||||||| |||||||||||||||||||| ||     
T  39267508 caactcgtgcgacaaagatcacatttaacctaaacaaggcattctgtaatactagtgctcccgaggcgagagcctctgctcgccatggcgagttca-gtc 39267410  T
Q  108 agatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||| |||||| |||||||||| || |||||||| |||||||||||| ||| || |||||||||||| ||| |||||||||||||||||||||    
T  39267409 agattctccaaa-gtttcattct-aagtctttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaa 39267318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 15754757 - 15754557
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | | ||| |||||| |||  ||||||||||||| |||||||| |||| |||    
T  15754757 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaaaacaagtgctcccgaggcgagagcctatgctcgccgtggcaagt 15754658  T
Q  101 tcaggttagatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    || ||| ||||| || |||  ||||||||| || | |||||| |||||||||||| |||  | |||||||||||||||| ||||||||||||||||||||    
T  15754657 tc-ggtcagattctcaaaagttttcattct-aagtttttccaggttcaatctcattctactttctttcctaatcattattagacatgttcaggcactcaa 15754560  T
Q  200 aag 202  Q
    |||    
T  15754559 aag 15754557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 8 - 200
Target Start/End: Complemental strand, 9751412 - 9751222
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcaggtt 107  Q
    |||||||||||||||||||||||||||| |||||||||||| ||| |||||||||  |||| ||||||||||||| ||||| ||||||||||||||| |     
T  9751412 caactcgtgcgacaaagatcgcatttaaactaaacaaggcattctgtaacacaagcgctcgcgaggcgagagcctctgctcaccatggcgagttcag-tc 9751314  T
Q  108 agatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    | ||| |||||| ||||||||||||  |||||||| |||||| ||||| ||| || |||||||||||| ||| |||||||||||||||||||||    
T  9751313 aaattctccaaa-gtttcattctaag-tctttccaggttcaacctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaa 9751222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 199
Target Start/End: Original strand, 18302448 - 18302626
Alignment:
Q  19 acaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcaggttagatt-tccaa 117  Q
    |||| |||||||||||||||||||| |||| ||| |||||||||| |||| ||||||||||||| |||||||||||||||||||| || ||||| |||||    
T  18302448 acaaggatcgcatttaacctaaacatggcattctgtaacacaagtgctcgcgaggcgagagcctctgctcgccatggcgagttca-gtcagattatccaa 18302546  T
Q  118 acgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    | |||||||||| || |||||||| |||||||||||| ||| || |||||||||| | ||| ||||||||||||||||||||    
T  18302547 a-gtttcattct-aagtctttccaggttcaatctcatcctacattctttcctaataaatattagacatgttcaggcactcaa 18302626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 810999 - 810800
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||| | ||||||||||||||||||||| ||||||||||| | | ||||| ||||||||| ||||||||||||| | |||||||||||||||    
T  810999 ctcacatcaacttgcgcgacaaagatcgcatttaacttaaacaaggcattttgtaacataagtactcgcgaggcgagagcctctactcgccatggcgagt 810900  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||| || | |||  ||   ||||||||||| |||||||| ||||||||| || ||  |  |||||||||||||||| ||| |||||||||||||||||    
T  810899 tcagg-tacagttcacaaaaattcattctaaattctttccaggttcaatcttattctccaatctttcctaatcattattagatatgttcaggcactcaaa 810801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 28505169 - 28504972
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||||  |||||||||||||||| |||||||| |||||| ||| ||||||||   |||| ||||||||||||| |||||||||||||||||    
T  28505169 ctcacatcaactcgaacgacaaagatcgcattcaacctaaa-aaggcattctgtaacacaaacgctcgcgaggcgagagcctctgctcgccatggcgagt 28505071  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    || ||| |||||  | ||  |||||||||||  ||||| || |||||||||||| ||| || |||||||||||||||| |||||||||||||||||||||    
T  28505070 tc-ggtcagattctctaaattttcattctaag-tcttttcaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaa 28504973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 3564171 - 3564034
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||| |||||||||  |||||||||||||| ||||||||||| ||| ||||||| |||||||||| |||||||||||| ||| || |    
T  3564171 actcgcgaggcgagagcatttgctcgctgtggcgagttcaggtcagatttccaaaagtt-cattctacaatctttccaggttcaatctcatcctacattc 3564073  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  3564072 tttcctaatcattattagacatgttcaggcactcaaaag 3564034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 9509502 - 9509640
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| | |||||| |||||||||||||| ||| | ||| | ||||||||||| |||||||||| |||||||||||| ||| || |    
T  9509502 actcgcgaggcgagagcctctcctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattc 9509601  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  9509602 tttcctaatcattattagacatgttcaggcactcaaaag 9509640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 38227794 - 38227931
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| ||| | | ||| ||||||||||||| |||||||| |||||||||||| ||| || |    
T  38227794 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccaaaaagtttcattctaaa-tctttccaggttcaatctcattctacattc 38227892  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  38227893 tttcctaatcattattagacatgttcaggcactcaaaag 38227931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 64 - 200
Target Start/End: Complemental strand, 15143844 - 15143709
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| ||||||||||||||||| ||||| ||| |  |||| ||| |||||||||||||||||| |||||||||||| |||||  |    
T  15143844 actcgcgaggcgagagcctctgctcgccatggcgagtacaggtcagaatcacaaaagtt-cattctaaaatctttccaggttcaatctcattctaaaatc 15143746  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||||||||||||| |||||||||||||||||||||    
T  15143745 tttcctaatcattattagacatgttcaggcactcaaa 15143709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 64 - 200
Target Start/End: Original strand, 44116819 - 44116953
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| ||||||||||||||||||||||| ||||| ||||| ||||||||||||| |||||||  |||||||||||| ||| || |    
T  44116819 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaa-gtttcattctaaa-tctttccgggttcaatctcattctacattc 44116916  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  44116917 tttcctaatcattattagacatgttcagggactcaaa 44116953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 8 - 200
Target Start/End: Complemental strand, 2832167 - 2831978
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcaggtt 107  Q
    ||||||||||||||| |||| ||||||||||||||||| || ||| ||| || ||| |||| ||||||||||||| |||||||||||| ||||||| ||     
T  2832167 caactcgtgcgacaaggatcacatttaacctaaacaagacattctgtaatactagtgctcgcgaggcgagagcctctgctcgccatggtgagttca-gtc 2832069  T
Q  108 agatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||| ||||||   |||||||| || |||||| | |||||||||||| ||| || |||||||||||| ||| |||||||||||||||||||||    
T  2832068 agattctccaaa--gttcattct-aagtctttctaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaa 2831978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 44014425 - 44014624
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagta-ctcgggaggcgagagcctttgctcgccatggcgag 99  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||| ||| |||| |   || |||| ||||||||||||| | ||| ||||||||||    
T  44014425 ctcacatcaattcgtgcgacaatgatcgcatttaacctaaacaaggcattctgtaac-cggttagctcgcgaggcgagagcctctactcaccatggcgag 44014523  T
Q  100 ttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    |||||||   | |  ||||  || |||||||||||||||||| |||||||||||| ||  |  |||||||||||||||| ||||||||||||||||||||    
T  44014524 ttcaggtgcaactaacaaaaatt-cattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaa 44014622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 17061767 - 17061630
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| | |||||||| |||||||||||| |||||  |||| |||| |||||||||||| |||| |||||||||||| ||| || |    
T  17061767 actcgcgaggcgagagcctctactcgccatcgcgagttcaggtcagattctcaaa-gttttattctaaaatctatccaggttcaatctcattctacattc 17061669  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  17061668 tttcctaatcattattaaacatgttcaggcactcaaaag 17061630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 70 - 202
Target Start/End: Original strand, 12699151 - 12699283
Alignment:
Q  70 gaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcct 169  Q
    |||| |||||||| |||||||| |||||||||||||| ||| | |||   ||||||||| | |||||||||| ||||||| |||| ||| || |||||||    
T  12699151 gaggtgagagcctctgctcgccgtggcgagttcaggtcagaatcccacgagtttcattcaacaatctttccaggttcaatttcatcctacattctttcct 12699250  T
Q  170 aatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||| |||||||||||||||||||||||    
T  12699251 aatcattattagacatgttcaggcactcaaaag 12699283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 34201036 - 34201234
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||||   ||||  |||||||||||||||||| |||||| | | ||||||||   |||| ||||| ||||||| |||||||||||||||||    
T  34201036 ctcacatcaactcgaatgacagggatcgcatttaacctaaa-aaggcattatgtaacacaaacgctcgcgaggcaagagcctctgctcgccatggcgagt 34201134  T
Q  101 tcaggttagatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    |||| | ||||| ||||||  |||||||||||  ||||| || |||||||||||| |||||| ||||| | |||||||| |||||||||||| |||||||    
T  34201135 tcag-tcagattctccaaat-tttcattctaag-tctttacaggttcaatctcattctaaattctttcttgatcattattagacatgttcagacactcaa 34201231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 11995898 - 11995796
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||||  ||||||||||||||||||||||||| |||||| ||| |||||||| | |||| ||||||||||||| |||| ||||||||||||    
T  11995898 ctcacatcaactcgaacgacaaagatcgcatttaacctaaa-aaggcattctgtaacacaaatgctcgcgaggcgagagcctctgcttgccatggcgagt 11995800  T
Q  101 tcag 104  Q
    ||||    
T  11995799 tcag 11995796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 12756523 - 12756387
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| | |||||||||| |||||||||| || || | ||| ||| |||||| ||||  | ||| |||||||||||| ||| || |    
T  12756523 actcgcgaggcgagagcctctactcgccatggtgagttcaggtcagcttccaaaaagtt-cattcttaaataat-ccaggttcaatctcattctacattc 12756426  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  12756425 tttcctaatcattattaaacatgttcaggcactcaaaag 12756387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 40443763 - 40443828
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||| |||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||    
T  40443763 ttccaggttcaatctcatcctaaattctttcctaatcattattagacatgttcaggcactcaaaag 40443828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 16056580 - 16056778
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||| ||| ||||      ||||| ||||||||||||| | ||||| |||||||||    
T  16056580 ctcacatcaactcgtgctacaaagatcgcatttaacct-aacaaggcattctgtaactgggtaactcgcgaggcgagagcctctactcgctatggcgagt 16056678  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||||   ||| |||||   | |||||| |||   ||||| |||||||||||  |||||  |||||||| ||||||| | ||||||||||| || ||||    
T  16056679 tcaggtgtaattcccaaa-aatccattcttaaactattccaggttcaatctcaatctaaaatctttcctattcattattatacatgttcaggtacacaaa 16056777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 9389565 - 9389462
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| ||| ||||       |||| ||||||||||||| | |||||||||||||||    
T  9389565 ctcacatcaactcgtgtgacaaagatcgcttttaacctaaacaaggcattctgtaactgcttagctcgcgaggcgagagcctctactcgccatggcgagt 9389466  T
Q  101 tcag 104  Q
    ||||    
T  9389465 tcag 9389462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 15116733 - 15116835
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||||| || |||||||||| ||||||||| ||| |  |||||| ||||| ||||||||||||| | ||||| |||| ||||    
T  15116733 ctcacatcaactcgtgcgacaaaggtcacatttaacct-aacaaggcattctgtctcacaaggactcgcgaggcgagagcctctactcgctatggtgagt 15116831  T
Q  101 tcag 104  Q
    ||||    
T  15116832 tcag 15116835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 67997 - 68099
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||| ||| ||||       |||| ||||||||||||| | |||||||||||||||    
T  67997 ctcacatcaacttgtgcgacaaggatcgcatttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcgagt 68096  T
Q  101 tca 103  Q
    |||    
T  68097 tca 68099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 2529915 - 2529818
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcagg 105  Q
    |||||||||||||||||||||||||||||||||  |||||| ||| |||||| ||| |||| |||||||| |   || ||||| ||||||||||||||    
T  2529915 caactcgtgcgacaaagatcgcatttaacctaattaaggcattctgtaacactagtgctcgcgaggcgagggatattactcgctatggcgagttcagg 2529818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 15113196 - 15113296
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||||| || |||||||||| |||||||||  || |  |||||| ||||| ||||||||||||| | ||||| |||||||||    
T  15113196 ctcacatcaactcgtgcgacaaaggtcacatttaacct-aacaaggcatcctgtctcacaaggactcgcgaggcgagagcctctactcgctatggcgagt 15113294  T
Q  101 tc 102  Q
    ||    
T  15113295 tc 15113296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 201
Target Start/End: Complemental strand, 16219582 - 16219387
Alignment:
Q  4 acatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttca 103  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||| ||| ||||   |  ||||| |||||||| |||| | ||||||||||||||||||    
T  16219582 acatcaacttgtgcgacaaagatcgcatttaacct-aacaaggcattctgtaactagacaactcgcgaggcgagggcctctactcgccatggcgagttca 16219484  T
Q  104 ggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
     ||   | | |||||   |||||||| |||   ||||| |||||||||||  |||||  |||||||||||||||| | ||| ||| || |||||||||    
T  16219483 cgtgtaactcccaaa-aattcattcttaaactattccaggttcaatctcaatctaaaatctttcctaatcattattatacaagtttagacactcaaaa 16219387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 16385993 - 16385928
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||| |||||||||||| ||| || |||||||||||||||| |||||||||||||||||||||||    
T  16385993 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaag 16385928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 27847579 - 27847514
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||| |||||||||||| |||||| ||||||||||||| || |||||||||||||||||||||||    
T  27847579 ttccaggttcaatctcatcctaaattctttcctaatcataattagacatgttcaggcactcaaaag 27847514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 22073168 - 22073366
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||| ||||||||||||||| ||||| ||| ||| ||||      ||||| |||||||| |||| | |||||||||||||||    
T  22073168 ctcacatcaactcgtgcgacaaggatcgcatttaacct-aacaaagcattctgtaactgggtaactcgcgaggcgagggcctctactcgccatggcgagt 22073266  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||||   | | |||||   | |||||| |||   ||| | |||||||||||| ||| |  |||| ||||||||||| | |||||||||||||||||||    
T  22073267 tcaggtgtaactcccaaa-aatccattcttaaactattctaggttcaatctcattctagaatcttttctaatcattattacacatgttcaggcactcaaa 22073365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 47832060 - 47832116
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataac 57  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| ||| ||| ||||    
T  47832060 ctcacatcaactcgtccgacaaagatcacatttaacctaaacaaagcattctgtaac 47832116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 163 - 201
Target Start/End: Complemental strand, 11995767 - 11995729
Alignment:
Q  163 ctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  11995767 ctttcctaatcattattagacatgttcaggcactcaaaa 11995729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 163 - 201
Target Start/End: Original strand, 47832220 - 47832258
Alignment:
Q  163 ctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  47832220 ctttcctaatcattattagacatgttcaggcactcaaaa 47832258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 201
Target Start/End: Complemental strand, 12255598 - 12255462
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| | ||||| |||||||||||||||   | | |||||  || |||||| |||   ||||| |||||||||||  ||| |  |    
T  12255598 actcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaactcccaaaaatt-cattcttaaactattccaggttcaatctcaatctagaatc 12255500  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    ||||||||||||||| | ||||||||| ||||||||||    
T  12255499 tttcctaatcattattatacatgttcaagcactcaaaa 12255462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 26212371 - 26212434
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||| |||||||||||| ||| || ||| |||||| | ||| |||||||||||||||||||||    
T  26212371 ttccaggttcaatctcatcctacattcttacctaataaatattagacatgttcaggcactcaaa 26212434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 2279847 - 2279789
Alignment:
Q  143 gttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    |||||||||||  |||||  |||||||||||||||| |  |||||||||||||||||||    
T  2279847 gttcaatctcaatctaaaatctttcctaatcattattatgcatgttcaggcactcaaaa 2279789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 201
Target Start/End: Original strand, 16324418 - 16324456
Alignment:
Q  163 ctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  16324418 ctttcctaatcattattagacatgttcaagcactcaaaa 16324456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 110
Target Start/End: Complemental strand, 16386055 - 16386009
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttaga 110  Q
    ||||| ||||||||||||  |||||||| ||||||||||||||||||    
T  16386055 actcgcgaggcgagagccactgctcgccgtggcgagttcaggttaga 16386009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 201
Target Start/End: Original strand, 18006053 - 18006091
Alignment:
Q  163 ctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  18006053 ctttcataatcattattagacatgttcaggcactcaaaa 18006091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 40443702 - 40443744
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggt 106  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||    
T  40443702 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 40443744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 11987504 - 11987544
Alignment:
Q  60 aagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||| |||| ||||||||||| |||||||||||||||||||    
T  11987504 aagtgctcgcgaggcgagagcatttgctcgccatggcgagt 11987544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16324258 - 16324313
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataac 57  Q
    ||||||||||||| |||||||| |||| |||||||||| ||||||||| ||| ||||    
T  16324258 ctcacatcaactcatgcgacaaggatcacatttaacct-aacaaggcattctgtaac 16324313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 4e-46; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 21754288 - 21754485
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||| ||||||||||| ||||||||||||| |||||||||||||||||    
T  21754288 ctcacatcaactcgtgcgacaaggatcacatttaacctaa-caaggcagtctgtaaaacaagtactcgcgaggcgagagcctctgctcgccatggcgagt 21754386  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    |||||||   ||  ||||   ||||||||||| |||| ||| |||||||||| | ||  |  |||||||||||||||| |||||||||||||||||||||    
T  21754387 tcaggttcagttcacaaa--attcattctaaagtcttcccaggttcaatctctttctccaatctttcctaatcattattagacatgttcaggcactcaaa 21754484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 433321 - 433458
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| ||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||| |||||||||||| ||| || |    
T  433321 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaa-gtttcattctaaaatctttccaggttcaatctcattctacattc 433419  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||  |||||||||||| ||||||||||    
T  433420 tttcctaatcattaatagacatgttcagacactcaaaag 433458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 34510094 - 34510231
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| ||||||||||| ||| ||||||| |||||||||| |||||||||||| ||| || |    
T  34510094 actcgtgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtt-cattctacaatctttccaggttcaatctcatcctacattc 34510192  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  34510193 tttcctaatcattattagacatgttcaggcactcaaaag 34510231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 64 - 200
Target Start/End: Complemental strand, 50210020 - 50209885
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| ||| ||||||| ||||||||||||| |||||||| |||||||||||| ||| || |    
T  50210020 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccaaaagtttcattctaaa-tctttccaggttcaatctcattctacattc 50209922  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||||||||||||| |||||||||||||||||||||    
T  50209921 tttcctaatcattattagacatgttcaggcactcaaa 50209885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 22532583 - 22532720
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| ||||| || ||||||||||| || ||||||||||| ||| ||||||| |||| ||||| |||||||||||| ||| || |    
T  22532583 actcgcgaggcgagagcctctgctcaccgtggcgagttcaagtcagatttccaaaagtt-cattctacaatccttccaggttcaatctcatcctacattc 22532681  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  22532682 tttcctaatcattattagacatgttcaggcactcaaaag 22532720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 20918854 - 20919052
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||| |||  |||||||||||||||| |||||||| |||||| ||| |||||||    |||| ||||||||||||| |||||||||||||||||    
T  20918854 ctcacatcaagtcgaacgacaaagatcgcattcaacctaaa-aaggcattctttaacacacaagctcgcgaggcgagagcctctgctcgccatggcgagt 20918952  T
Q  101 tcaggttagatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    ||| || ||||| ||||||  ||  ||||| || ||||| || |||||||||||| ||| || |||||||||||||||| ||||||||||||||||||||    
T  20918953 tca-gtcagattctccaaa-tttaaattct-aagtcttttcaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaa 20919049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 33681260 - 33681459
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||| ||||||||||||||||||| ||| ||||||| ||| ||||      | ||| ||||||||||||| |||||||||||||||||    
T  33681260 ctcacatcaactcgtgtgacaaagatcgcatttaacataagcaaggcactctgtaactgggtaattcgcgaggcgagagcctctgctcgccatggcgagt 33681359  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||||   | |  ||||  || |||||||||||||||||| |||||||||||| ||  |  |||||||||||||||| |||||| |||||| |||||||    
T  33681360 tcaggtgcaactcacaaaaatt-cattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatattcaggaactcaaa 33681458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 52927850 - 52927652
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||      | ||| |||||||| |||| | |||||||||||||||    
T  52927850 ctcacatcaactcgtgcgacaaagatcgcatttaacctaa-caaggcattctgtaactggtcaattcgcgaggcgagggcctctactcgccatggcgagt 52927752  T
Q  101 tcaggt-tagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    |||||| ||  |||  |||   ||||||| |||||||||||| |||||||||||| ||  |  ||||| |||||||||| ||||||||||||||||||||    
T  52927751 tcaggtctaactttaaaaaa--ttcattccaaaatctttccaggttcaatctcattctccaatctttcataatcattattagacatgttcaggcactcaa 52927654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 22237881 - 22238079
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||      | ||| |||||||| |||| | |||||||||||||||    
T  22237881 ctcacatcaactcgtgcgaaaaagatcgcatttaacctaaacaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagt 22237980  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||| ||   | |  ||||   ||||||| |||||||||||| ||| |||||||| ||  |  ||||||||| |||||| |||||||||||||||||||||    
T  22237981 tcaagtgcaactcacaaa--attcattccaaaatctttccaggtttaatctcattctccaatctttcctaaccattattagacatgttcaggcactcaaa 22238078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 70 - 202
Target Start/End: Complemental strand, 22354374 - 22354242
Alignment:
Q  70 gaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcct 169  Q
    ||||||||||||| | |||||| |||||||||||||| ||| | ||| | ||||||||||| ||||| |||| |||||||||||| |||  |  ||||||    
T  22354374 gaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctatccaggttcaatctcatcctacgttatttcct 22354275  T
Q  170 aatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||| ||||||||||| |||||||||||    
T  22354274 aatcattataagacatgttcaagcactcaaaag 22354242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 63 - 202
Target Start/End: Original strand, 20135500 - 20135638
Alignment:
Q  63 tactcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaac-gtttcattctaaaatctttccacgttcaatctcatgctaaat 161  Q
    |||||| |||| |||||| | ||||||||||||||||||| ||| ||| |||||||  ||||||||||||  |||||||| || ||||||||| ||| ||    
T  20135500 tactcgcgaggtgagagcttctgctcgccatggcgagttc-ggtcagaattccaaaatgtttcattctaag-tctttccaggtccaatctcatcctacat 20135597  T
Q  162 gctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
     |||||||||||||||| ||||||||||| |||||||||||    
T  20135598 tctttcctaatcattattagacatgttcaagcactcaaaag 20135638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 20248531 - 20248727
Alignment:
Q  4 acatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagta-ctcgggaggcgagagcctttgctcgccatggcgagttc 102  Q
    ||||||||| |||||||||  ||||||||||||||||| |||||| ||| ||||  |  || |||| ||||||| ||||| | |||||||||||||||||    
T  20248531 acatcaacttgtgcgacaagaatcgcatttaacctaaataaggcattctgtaact-agttagctcgcgaggcgatagcctctactcgccatggcgagttc 20248629  T
Q  103 aggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    |||||   ||  ||||  || ||||||||| ||| |||| |||||||||||| ||     |||||||||||||||| ||||||||||||||||||||||    
T  20248630 aggttcagttcacaaaaatt-cattctaaagtctctccaggttcaatctcattctccgatctttcctaatcattattagacatgttcaggcactcaaaa 20248727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 20637101 - 20637206
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||| || ||| ||||  |    |||| ||||||||||||| | |||||||||||||||    
T  20637101 ctcacatcaactcatgcgacaaagatcgcttttaacctaaacaagacattctgtaactgattagctcgcgaggcgagagcctctactcgccatggcgagt 20637200  T
Q  101 tcaggt 106  Q
    ||||||    
T  20637201 tcaggt 20637206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 12271800 - 12271902
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||||| || |||||||||| ||||||||| ||| |  |||||| ||||| ||||||||||||| | ||||| |||| ||||    
T  12271800 ctcacatcaactcgtgcgacaaaggtcacatttaacct-aacaaggcattctgtctcacaaggactcgcgaggcgagagcctctactcgctatggagagt 12271898  T
Q  101 tcag 104  Q
    ||||    
T  12271899 tcag 12271902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 22921737 - 22921635
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagta-ctcgggaggcgagagcctttgctcgccatggcgag 99  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||  | | |  ||| ||||||||||||| | ||||||||||||||    
T  22921737 ctcacatcaactcgtgcgacaaagatcgcatttaacccaaacaaggcattctgtaac-taggcagttcgcgaggcgagagcctctactcgccatggcgag 22921639  T
Q  100 ttca 103  Q
    ||||    
T  22921638 ttca 22921635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 35981556 - 35981451
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagta-ctcgggaggcgagagcctttgctcgccatggcgag 99  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||| ||| ||||  |  || |||| ||||||||||||| | ||| ||||||||||    
T  35981556 ctcacatcaattcgtgcgacaaagatcgcttttaacctaaacaaggcattctgtaac-tagttagctcgcgaggcgagagcctctactcaccatggcgag 35981458  T
Q  100 ttcaggt 106  Q
    |||||||    
T  35981457 ttcaggt 35981451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 22355920 - 22355855
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||| |||||||||||| ||| || |||||||||||||||| |||||||||||||||||||||||    
T  22355920 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaag 22355855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 22357606 - 22357541
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||| |||||||||||| ||| || |||||||||||||||| |||||||||||||||||||||||    
T  22357606 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaag 22357541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 16368154 - 16368051
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||   ||| |  ||||||  |||| ||||||||||||||| ||||| |||||||||    
T  16368154 ctcacatcaactcgtgcgacaaaggtcacatttaacctaa-caaggtgttctgtctcacaagggctcgcgaggcgagagcctttactcgctatggcgagt 16368056  T
Q  101 tcagg 105  Q
    |||||    
T  16368055 tcagg 16368051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 49261592 - 49261648
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataac 57  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||    
T  49261592 ctcacatcaactcgtgcgacaaagatcgcttttaacctaaacaaggcattctgtaac 49261648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 20846965 - 20846900
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||| |||||||||||| ||| || ||| |||||||||||| |||||||||||||||||||||||    
T  20846965 ttccaggttcaatctcatcctacattcttacctaatcattattagacatgttcaggcactcaaaag 20846900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 27250475 - 27250410
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||| |||||||| ||| ||| || |||||||||||||||| |||||||||||||||||||||||    
T  27250475 ttccaggttcaatcccatcctacattctttcctaatcattattagacatgttcaggcactcaaaag 27250410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 21861437 - 21861335
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||||  || |||||||||| ||||||||| ||| |  |||||| || || |||||||| |||| | ||||| |||||||||    
T  21861437 ctcacatcaactcgtgcgacaaatgtcacatttaacct-aacaaggcattctgtctcacaaggacacgcgaggcgagggcctctactcgctatggcgagt 21861339  T
Q  101 tcag 104  Q
    ||||    
T  21861338 tcag 21861335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 38801137 - 38801074
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||| |||||||| ||| ||| || |||||||||||||||| |||||||||||||||||||||    
T  38801137 ttccaggttcaatcacatcctacattctttcctaatcattattagacatgttcaggcactcaaa 38801074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 21027055 - 21027120
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||| |||||||||||| ||| || ||| |||||||||||| ||||||||||| |||||||||||    
T  21027055 ttccaggttcaatctcatcctacattcttacctaatcattattagacatgttcaagcactcaaaag 21027120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 163 - 201
Target Start/End: Complemental strand, 22921576 - 22921538
Alignment:
Q  163 ctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  22921576 ctttcctaatcattattagacatgttcaggcactcaaaa 22921538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 21301245 - 21301208
Alignment:
Q  165 ttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    |||||||||||||| |||||||||||||||||||||||    
T  21301245 ttcctaatcattattagacatgttcaggcactcaaaag 21301208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 21896126 - 21896030
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcga 98  Q
    |||||||||||||||||||||||| || |||||||||| ||||||||| | | |  |||||| ||||| |||||| | |||| | ||||| |||||||    
T  21896126 ctcacatcaactcgtgcgacaaaggtcacatttaacct-aacaaggcattttgtctcacaaggactcgcgaggcgggggcctctactcgctatggcga 21896030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 50613983 - 50613881
Alignment:
Q  2 tcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagtt 101  Q
    ||||||||||||||||||||||| || |||||||||||| |||||   ||| |  ||||||  |||| | ||||||| ||| | ||||| ||||||||||    
T  50613983 tcacatcaactcgtgcgacaaaggtcacatttaacctaa-caaggtgttctgtctcacaagggctcgcggggcgagaacctctactcgctatggcgagtt 50613885  T
Q  102 cagg 105  Q
    ||||    
T  50613884 cagg 50613881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 50621811 - 50621709
Alignment:
Q  2 tcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagtt 101  Q
    ||||||||||||||||||||||| || |||||||||||| |||||   ||| |  ||||||  |||| | ||||||| ||| | ||||| ||||||||||    
T  50621811 tcacatcaactcgtgcgacaaaggtcacatttaacctaa-caaggtgttctgtctcacaagggctcgcggggcgagaacctctactcgctatggcgagtt 50621713  T
Q  102 cagg 105  Q
    ||||    
T  50621712 cagg 50621709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 107
Target Start/End: Original strand, 21162080 - 21162122
Alignment:
Q  65 ctcgggaggcgagagcctttgctcgccatggcgagttcaggtt 107  Q
    |||| ||||||||||||| ||||||||||||||||| ||||||    
T  21162080 ctcgcgaggcgagagcctctgctcgccatggcgagtacaggtt 21162122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 28194306 - 28194213
Alignment:
Q  13 cgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagta-ctcgggaggcgagagcctttgctcgccatggcgagttcaggt 106  Q
    ||||||||||||||||||| ||||||||||||| || | | ||| |   ||| |||| ||||||||||||| | || ||||||||||||||||||    
T  28194306 cgtgcgacaaagatcgcatgtaacctaaacaagacattttgtaa-atgggtagctcgcgaggcgagagcctctacttgccatggcgagttcaggt 28194213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 2171 - 1972
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||| |||| ||||||||||||    
T  2171 ctcacatccactcgtgcgacaaggatcgcatttaacctaaacaaggcattctgtaacacaagtactcgcgaggcgagagcctctgcttgccatggcgagt 2072  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    |||||||  | |||  ||  |||||||||||| |||||  | |||||||||||| ||  |  |||||||||||||||| ||||||||||||  |||||||    
T  2071 tcaggtt-cagttcacaaaatttcattctaaagtctttttatgttcaatctcattctccaatctttcctaatcattattagacatgttcagtgactcaaa 1973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 288 - 476
Alignment:
Q  9 aactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcaggtta 108  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||| || ||| |||| ||||||||||||| ||||||||||||||||||||| | |    
T  288 aactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctctgctcgccatggcgagttcag-tca 386  T
Q  109 gatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    |||| |||||| ||| ||||||||  | |||||| |||||||||||| ||| || |||||||||||| ||| ||||||||||||||||||||    
T  387 gattctccaaa-gttccattctaag-tatttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaa 476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 3e-44; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 6759570 - 6759708
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| ||||||||||| ||||||||||||||| |||||| |||||||||||| ||| || |    
T  6759570 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaaatatttccaagttcaatctcattctacattc 6759669  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  6759670 tttcctaatcattattagacatgttcaagcactcaaaag 6759708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 41598498 - 41598635
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| ||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||| |||||||||||| ||| || |    
T  41598498 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaa-gtttcattctaaaatctttccaggttcaatctcattctacattc 41598596  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  41598597 tttcataatcattattagacatgttcaggcactcaaaag 41598635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 5866145 - 5865947
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||||  |||||||||||||||| |||||||| |||||| ||| ||||||||   |||| ||||||||||||| |||||||||||||||||    
T  5866145 ctcacatcaactcgaacgacaaagatcgcattcaacctaaa-aaggcattctgtaacacaaacgctcgcgaggcgagagcctctgctcgccatggcgagt 5866047  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    || ||| |||||  | ||  |||||||||||  ||||| || |||||||||||| ||| || |||||||||||||||| |||||||||||||||||||||    
T  5866046 tc-ggtcagattctctaaattttcattctaag-tcttttcaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaa 5865949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 18879045 - 18878907
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||| | |||||||||||||| ||| | ||| | ||||||||||| |||||||||| |||||||||||| ||| || |    
T  18879045 actcgcgaggcgagagcctctgctcgtcttggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattc 18878946  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  18878945 tttcctaatcattattagacatgttcaggcactcaaaag 18878907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 20536521 - 20536659
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| | |||||| |||||||||||||| ||| | ||| | ||||||||||| |||||||||| |||||||||||| ||| || |    
T  20536521 actcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccataagtttcattctacaatctttccaggttcaatctcatcctacattc 20536620  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  20536621 tttcctaatcattatcagacatgttcaggcactcaaaag 20536659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 21249634 - 21249832
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||| |  ||||||||||||||||||||||||| |||||| ||| |||||||| | |||| ||||||||||||| |||||||||||||||||    
T  21249634 ctcacatcaacttgaacgacaaagatcgcatttaacctaaa-aaggcattctgtaacacaaatgctcgcgaggcgagagcctctgctcgccatggcgagt 21249732  T
Q  101 tcaggttagatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    || ||| ||||| ||||||  ||||||||  || |||||||| ||||| |||||| ||| || |||||||||||||||| |||||||||  |||||||||    
T  21249733 tc-ggtcagattctccaaa-ttttcattc-caagtctttccaggttcagtctcatcctacattctttcctaatcattattagacatgtttgggcactcaa 21249829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 21255472 - 21255670
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||||  ||||||||||||||||||||||||| |||||| ||| ||| |||| | |||| ||||||||||||  |||||||||||||||||    
T  21255472 ctcacatcaactcgaacgacaaagatcgcatttaacctaaa-aaggcattctgtaatacaaatgctcgcgaggcgagagccgctgctcgccatggcgagt 21255570  T
Q  101 tcaggttagatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    || ||| ||||| ||||||  ||||||||  || |||||||| |||||||||||| ||| || |||||||||||||||| |||||||||  |||||||||    
T  21255571 tc-ggtcagattctccaaa-ttttcattc-caagtctttccaggttcaatctcatcctacattctttcctaatcattattagacatgtttgggcactcaa 21255667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 22627049 - 22627186
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||| ||||| ||| ||||||||||| ||| ||||||| |||||||| | |||||||||||| ||| || |    
T  22627049 actcgcgaggcgagagcctctgctcgccgtggcaagttcgggtcagatttccaaaggtt-cattctacaatctttcgaggttcaatctcatcctacattc 22627147  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  22627148 tttcctaatcattattagacatgttcaggcactcaaaag 22627186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 23406694 - 23406832
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| | |||||| |||||||||||||| ||| | ||| | ||||||||||| |||||||||| || ||||||||| ||| || |    
T  23406694 actcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggtccaatctcatcctacattc 23406793  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  23406794 tttcctaatcattattagacatgttcaggcactcaaaag 23406832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 17141166 - 17141364
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||||   ||||||||||||||| |||||||| |||||  ||| ||||||||   |||| ||||||||||||| |||||||||||||||||    
T  17141166 ctcacatcaactcgaatgacaaagatcgcattcaacctaaa-aaggcgttctgtaacacaaacgctcgcgaggcgagagcctctgctcgccatggcgagt 17141264  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    || |||  ||||  | ||  ||||||||| || ||||| || |||||||||||| ||| || |||||||||||||||| |||||||||||||||||||||    
T  17141265 tc-ggtctgattctctaaattttcattct-aagtcttttcaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaa 17141362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 21673956 - 21674155
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||| |||| ||||||||||||||||||||| ||||||||||||| ||| |||||     | ||| |||||||| |||| | |||||||||||||||    
T  21673956 ctcacattaacttgtgcgacaaagatcgcatttatcctaaacaaggcattctgtaacaagtcaattcgcgaggcgagggcctctactcgccatggcgagt 21674055  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||||   | |  ||||  || |||||||||||||||||| |||||||||||| ||  |  |||||||||||||||| |||||||||||||||||||||    
T  21674056 tcaggtgcaactcacaaatatt-cattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaa 21674154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 71 - 202
Target Start/End: Complemental strand, 28648844 - 28648714
Alignment:
Q  71 aggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttccta 170  Q
    |||||||||||| |||||||| |||||||||||||| | | ||| ||| ||||||||||||| |||||||| |||||||||||| ||| || ||||| ||    
T  28648844 aggcgagagcctctgctcgccgtggcgagttcaggtcaaaattcaaaaggtttcattctaaa-tctttccatgttcaatctcatcctacattctttcata 28648746  T
Q  171 atcattatgagacatgttcaggcactcaaaag 202  Q
    |||||||| |||||||||||||||||||||||    
T  28648745 atcattattagacatgttcaggcactcaaaag 28648714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 18818217 - 18818080
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| |||   ||||| |||||||| || |||||||||| |||||||||||| ||| ||      
T  18818217 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaaa-ccaaaagtttcattttacaatctttccaggttcaatctcatcctacattt 18818119  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  18818118 tttcctaatcattattagacatgttcaggcactcaaaag 18818080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 16092148 - 16092011
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||||||||||||||||| |||||||| |||||||||||||| ||| ||||||| ||||  || |||| ||||| || ||| |||||||| ||| || |    
T  16092148 actcgggaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccaaaagtttttttttaaa-tcttttcaggtttaatctcattctacattc 16092050  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  16092049 tttcctaatcattattagacatgttcatgcactcaaaag 16092011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 26355568 - 26355369
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagta-ctcgggaggcgagagcctttgctcgccatggcgag 99  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||| ||| ||||  |  || |||| ||||||||||||| | ||||||||||| ||    
T  26355568 ctcacatcaacttgtgcgacaaagatcgcatttaacataaacaaggcattctgtaac-tagttagctcgtgaggcgagagcctctactcgccatggcaag 26355470  T
Q  100 ttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    |||||| || | |||  ||   ||||||||||| |||||||| |||||||||||  ||  |  || ||||||||||||| ||||||||||||||||||||    
T  26355469 ttcagg-tacaattcacaaaaattcattctaaagtctttccaggttcaatctcaatcttcaatctctcctaatcattattagacatgttcaggcactcaa 26355371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 7373084 - 7373200
Alignment:
Q  86 ctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacat 185  Q
    |||||| |||||||||||||| ||| || || | ||||||||||| |||||||||| ||||||| |||| ||| || |||||||||||||||| ||||||    
T  7373084 ctcgccgtggcgagttcaggtcagaatttcacaagtttcattctacaatctttccaggttcaatttcatcctacattctttcctaatcattattagacat 7373183  T
Q  186 gttcaggcactcaaaag 202  Q
    |||||||||||||||||    
T  7373184 gttcaggcactcaaaag 7373200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 22875379 - 22875516
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||| |||||||||||||||| ||||| ||||| |||||||||||||||||||||| |||||| ||| | ||| |  |    
T  22875379 actcgcgaggcgagagcctctgctcgtcatggcgagttcaggtcagattcccaaa-gtttcattctaaaatctttccaggttcaacctcgttctacaatc 22875477  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| | ||||||| || | ||||||||    
T  22875478 tttcctaatcattattaaacatgtttagacgctcaaaag 22875516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 21491245 - 21491443
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||| ||||||  | |||||||||||||| |||||||| |||||| ||| ||||||||   |||| ||||| ||||||| | ||||||||||| |||    
T  21491245 ctcacattaactcgaactacaaagatcgcattcaacctaaa-aaggcattctgtaacacaaacgctcgcgaggcaagagcctctactcgccatggcaagt 21491343  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    |  ||| |||||  | ||  |||||||||||  |||||| | |||||||||||| ||| || |||||||||||||||| |||||||||||||||||||||    
T  21491344 tt-ggtcagattctctaaattttcattctaag-tctttctaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaa 21491441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 21923736 - 21923598
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggtt-agatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatg 162  Q
    ||||| ||||||||||||| ||||| || ||||||||||||| | ||| | | ||| ||||||||||||| ||||| || |||||||||||| ||| ||     
T  21923736 actcgcgaggcgagagcctctgctcaccgtggcgagttcagggtcagaatccaaaaagtttcattctaaa-tcttttcaggttcaatctcatcctacatt 21923638  T
Q  163 ctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    || ||||||||||||| |||||||||||| ||||||||||    
T  21923637 ctgtcctaatcattattagacatgttcagacactcaaaag 21923598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 70 - 202
Target Start/End: Original strand, 23648873 - 23649004
Alignment:
Q  70 gaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaac-gtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcc 168  Q
    ||||||||||||| || |||||||||||||||| ||| ||| |||||||  ||||||||||||  ||||| || || ||||||||| ||| || ||||||    
T  23648873 gaggcgagagcctctgatcgccatggcgagttc-ggtcagaattccaaaatgtttcattctaag-tcttttcaggtccaatctcatcctacattctttcc 23648970  T
Q  169 taatcattatgagacatgttcaggcactcaaaag 202  Q
    |||||||||| |||||||||||| ||||||||||    
T  23648971 taatcattattagacatgttcagtcactcaaaag 23649004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 45130766 - 45130701
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||| |||||||||||| ||| || |||||||||||||||| |||||||||||||||||||||||    
T  45130766 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaag 45130701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 21918808 - 21918680
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| ||||||||||||||||||||||| ||| | ||| | ||||||          |||||| |||||||||| | ||| || |    
T  21918808 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttca----------tttccaggttcaatctcttcctacattc 21918719  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||| ||||||||||| |||||||||||||||||| ||||    
T  21918718 ttttctaatcattattagacatgttcaggcactccaaag 21918680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 31971630 - 31971695
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||| |||||||||||| ||| || |||||||||||||||| |||||||||||||||| ||||||    
T  31971630 ttccaggttcaatctcatcctacatcctttcctaatcattattagacatgttcaggcacacaaaag 31971695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 198
Target Start/End: Complemental strand, 19801286 - 19801101
Alignment:
Q  10 actcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcaggttag 109  Q
    ||||||||||||||||||| |   | ||||||||||||  ||| ||||||||||||||| ||||||||  ||| | |||||||||||||||||||||       
T  19801286 actcgtgcgacaaagatcgaaaa-atcctaaacaaggct-tctgtaacacaagtactcgcgaggcgaggacctctactcgccatggcgagttcaggtata 19801189  T
Q  110 atttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactca 198  Q
    | | ||| | | ||| |||| |||   ||||| ||||||||| || ||  |  |||||||||||||||| |||||||||||||||||||    
T  19801188 actcccacaag-ttcgttcttaaactattccaggttcaatcttattctctagtctttcctaatcattattagacatgttcaggcactca 19801101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 200
Target Start/End: Complemental strand, 25362942 - 25362823
Alignment:
Q  70 gaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcct 169  Q
    ||||||||||||| ||||||||||||||||||||||| ||| | ||| | |||||||||           || |||||||||||| ||| || |||||||    
T  25362942 gaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattc-----------caggttcaatctcatcctacattctttcct 25362854  T
Q  170 aatcattatgagacatgttcaggcactcaaa 200  Q
    ||||||||| || ||||||||| ||||||||    
T  25362853 aatcattattagtcatgttcagtcactcaaa 25362823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 38855119 - 38855015
Alignment:
Q  2 tcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagtt 101  Q
    |||||||||||||||||||||||||||  |||||||||| ||||||| ||| ||||      | ||| |||||||| |||| | ||||||||||||||||    
T  38855119 tcacatcaactcgtgcgacaaagatcgtgtttaacctaagcaaggcattctgtaactgggcaattcgcgaggcgagggcctctactcgccatggcgagtt 38855020  T
Q  102 caggt 106  Q
    |||||    
T  38855019 caggt 38855015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 16199387 - 16199328
Alignment:
Q  143 gttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    |||||||||||| ||| || |||||||||||||||| ||||||||| |||||||||||||    
T  16199387 gttcaatctcatcctacattctttcctaatcattataagacatgttaaggcactcaaaag 16199328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 39834095 - 39834282
Alignment:
Q  13 cgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagta-ctcgggaggcgagagcctttgctcgccatggcgagttcaggttagat 111  Q
    |||| ||||||||||||||||||| ||||||||| | ||| ||| |   ||| |||| ||||||||||||| | |||||||||||||||||||||   |     
T  39834095 cgtgggacaaagatcgcatttaacttaaacaaggtattctgtaa-atgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaac 39834193  T
Q  112 ttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    |  |||| | |||||||| |||   ||||| |||||||||||  ||| |  |||||||||||||||| | ||| ||| ||||||||||||    
T  39834194 tcacaaa-gattcattcttaaactattccaggttcaatctcaatctacaatctttcctaatcattatcatacaagtttaggcactcaaaa 39834282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 37116602 - 37116704
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||||| |||||||| || |||||| ||||| |||| |||||| |  ||||||  |||| ||||||||||||| | ||||| |||||||||    
T  37116602 ctcacatcaactcgtacgacaaaggtcacatttatcctaa-caag-cagtctgtctcacaagggctcgcgaggcgagagcctctactcgctatggcgagt 37116699  T
Q  101 tcagg 105  Q
    |||||    
T  37116700 tcagg 37116704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 21285850 - 21285889
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaa 40  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  21285850 ctcacatcaactcgtgcgataaagatcgcatttaacctaa 21285889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 163 - 201
Target Start/End: Complemental strand, 38854960 - 38854922
Alignment:
Q  163 ctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  38854960 ctttcctaatcattattagacatgttcaggcactcaaaa 38854922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 17266860 - 17266757
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||||||||| |||| || |||||||||||| |||||   ||| |  ||||||  |||| ||||||||||||| | || || |||||||||    
T  17266860 ctcacatcaactcgtgcgataaaggtcacatttaacctaa-caaggagttctgtctcacaagggctcgcgaggcgagagcctctacttgctatggcgagt 17266762  T
Q  101 tcagg 105  Q
    |||||    
T  17266761 tcagg 17266757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 22364915 - 22365014
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||   ||| |  ||||||  |||| ||||||||||||| | ||||| ||| |||||    
T  22364915 ctcacatcaactcgtgcgacaaaggtcacatttaacctaa-caaggtgttctgtctcacaagggctcgtgaggcgagagcctctactcgctatgtcgagt 22365013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 6520620 - 6520659
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaa 40  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  6520620 ctcacatcaactcatgcaacaaagatcgcatttaacctaa 6520659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 23760709 - 23760670
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaa 40  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  23760709 ctcacatcaacttgtgcgacaaagatcgcatttatcctaa 23760670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 20499052 - 20499110
Alignment:
Q  143 gttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    |||||||||||  |||||  ||| |||||||||||| | ||||||||||||||||||||    
T  20499052 gttcaatctcaatctaaaaacttacctaatcattattatacatgttcaggcactcaaaa 20499110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 201
Target Start/End: Complemental strand, 23760548 - 23760511
Alignment:
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    ||||||||||||||| ||||||||||||| ||||||||    
T  23760548 tttcctaatcattattagacatgttcaggaactcaaaa 23760511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 24353277 - 24353376
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||||| || |||||| ||| ||||||| | ||| |  ||||||  |||  |||||||| |||| | ||||| |||||||||    
T  24353277 ctcacatcaactcgtgcgacaaaggtcacatttatcct-aacaaggtattctgtctcacaagggctcacgaggcgagggcctctactcgctatggcgagt 24353375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 8 - 200
Target Start/End: Complemental strand, 207381 - 207191
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcaggtt 107  Q
    ||||||||||||||||||||||||||||||||||||| ||| | | ||| || ||| |||| ||||||||||||| |||||||||||||||||||| ||     
T  207381 caactcgtgcgacaaagatcgcatttaacctaaacaaagcattgtgtaatactagtgctcgcgaggcgagagcctctgctcgccatggcgagttca-gtc 207283  T
Q  108 agatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||| |||||| |||||||||| || |||||||| |||||||||||| ||| || || ||||||||| ||| |||||||||||||||||||||    
T  207282 agattctccaaa-gtttcattct-aagtctttccaggttcaatctcatcctacattctctcctaatcaatattagacatgttcaggcactcaaa 207191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 2164 - 2302
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||| ||||| | ||||||||||||||||||||| ||| | ||| | ||||||||||| |||||||||| |||||||||||| ||| || |    
T  2164 actcgtgaggcgatagcctctactcgccatggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattc 2263  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  2264 tttcctaatcattattagacatgttcaggcactcaaaag 2302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 8 - 199
Target Start/End: Complemental strand, 24513 - 24324
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcaggtt 107  Q
    |||||||| | |||| |||||||||||||||||||| | || ||| |||||||||| |||| ||||||||||||| |||||||||||||||||||| ||     
T  24513 caactcgtactacaaggatcgcatttaacctaaacatgacattctgtaacacaagtgctcgcgaggcgagagcctctgctcgccatggcgagttca-gtc 24415  T
Q  108 agatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    ||||| |||||| |||||||||| || |||||| | |||||||||||| |||||| |||||||||||| ||| ||||||||||||||||||||    
T  24414 agattatccaaa-gtttcattct-aagtctttctaggttcaatctcatcctaaattctttcctaatcaatattagacatgttcaggcactcaa 24324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 89; Significance: 4e-43; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 70 - 198
Target Start/End: Complemental strand, 33296 - 33168
Alignment:
Q  70 gaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcct 169  Q
    |||||||||||||||||||||| |||||||||||||| ||| ||||||| |||||||||||||||||||||| |||||||||||| ||| || |||||||    
T  33296 gaggcgagagcctttgctcgccgtggcgagttcaggtaagacttccaaaagtttcattctaaaatctttccaggttcaatctcatcctacattctttcct 33197  T
Q  170 aatcattatgagacatgttcaggcactca 198  Q
    ||||||||| |||||||| ||||||||||    
T  33196 aatcattattagacatgtccaggcactca 33168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 64 - 201
Target Start/End: Complemental strand, 25872 - 25736
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| |||||||||||  || ||||||| ||||||| || |||||||||||| ||| || |    
T  25872 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaaatt-cattctacaatcttttcaggttcaatctcatcctacattc 25774  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  25773 tttcctaatcattattagacatgttcaggcactcaaaa 25736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 89; Significance: 4e-43; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 8 - 199
Target Start/End: Complemental strand, 80194 - 80005
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcaggtt 107  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||| ||| || | | |||| ||||||||||||| ||||||||||| |||||||| ||     
T  80194 caactcgtgcgacgaagatcgcatttaacctaaacaaggcattctgtaatactattgctcgcgaggcgagagcctctgctcgccatgtcgagttca-gtc 80096  T
Q  108 agatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    ||||| |||||| |||||||||| || |||||||| |||||||||||| ||| || |||||||||||| ||| ||||||||||||||||||||    
T  80095 agattctccaaa-gtttcattct-aagtctttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaa 80005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 22542 - 22509
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcattta 34  Q
    ||||||||||||||||||||||||||||||||||    
T  22542 ctcacatcaactcgtgcgacaaagatcgcattta 22509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 8 - 200
Target Start/End: Complemental strand, 9696 - 9506
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcaggtt 107  Q
    |||||||||||||||||||| |||||||||||||||||||| ||| ||| || ||| |||| ||||||||||||| ||||||||||| |||||||| ||     
T  9696 caactcgtgcgacaaagatcacatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctctgctcgccatgacgagttca-gtc 9598  T
Q  108 agatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||| |||||| |||||||||| || ||||||||  ||||||||||| ||| || ||||| |||||| ||| |||||||||||||||||||||    
T  9597 agattctccaaa-gtttcattct-aagtctttccagattcaatctcatcctacattctttcgtaatcaatattagacatgttcaggcactcaaa 9506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 17022 - 16885
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| ||||| || |||||||||||||| ||| ||||||| ||||||||||||| |||||||| |||||||||||| ||| || |    
T  17022 actcgcgaggcgagagcctctgctctccgtggcgagttcaggtcagaattccaaaagtttcattctaaa-tctttccaggttcaatctcattctacattc 16924  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  16923 tttcctaatcattattagacatgttcaggcactcaaaag 16885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 79096 - 79032
Alignment:
Q  138 tccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    |||| |||||||||||| ||| || | |||||||||||||| | ||||||||| |||||||||||    
T  79096 tccaggttcaatctcattctacattccttcctaatcattattaaacatgttcatgcactcaaaag 79032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 52225 - 52363
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| ||| | ||| | ||||||||||| |||||||||| |||||||||||| ||| || |    
T  52225 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattc 52324  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  52325 tttcctaatcattattagacatgttcaggcactcaaaag 52363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 167787 - 167660
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| ||| | ||| | |||||| ||||            |||||||||||| |||||| |    
T  167787 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcaatctag-----------gttcaatctcatcctaaattc 167699  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  167698 tttcctaatcattattagacatgttcaggcactcaaaag 167660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 82; Significance: 6e-39; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 65 - 202
Target Start/End: Original strand, 20717 - 20854
Alignment:
Q  65 ctcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgct 164  Q
    |||| ||||||||||||| |||||||| |||||||||||||| ||| | ||| | ||||||||||| |||||||||| |||||||||||| ||| || ||    
T  20717 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctataatctttccaggttcaatctcatcctacattct 20816  T
Q  165 ttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    |||||||||||||| |||||||||||||||||||||||    
T  20817 ttcctaatcattattagacatgttcaggcactcaaaag 20854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 80; Significance: 1e-37; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 4821 - 4959
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaa-tctttccacgttcaatctcatgctaaatg 162  Q
    ||||| || |||||||||| ||||||||||||||||||||||| ||||| ||||| |||||||||||||| |||||||| |||||||||||| ||| ||     
T  4821 actcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaaa-gtttcattctaaaaatctttccaggttcaatctcattctacatt 4919  T
Q  163 ctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  4920 cttttctaatcattattagacatgttcaggcactcaaaag 4959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 12403 - 12541
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaa-tctttccacgttcaatctcatgctaaatg 162  Q
    ||||| || |||||||||| ||||||||||||||||||||||| ||||| ||||| |||||||||||||| |||||||| |||||||||||| ||| ||     
T  12403 actcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaaa-gtttcattctaaaaatctttccaggttcaatctcattctacatt 12501  T
Q  163 ctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  12502 cttttctaatcattattagacatgttcaggcactcaaaag 12541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 22355 - 22493
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaa-tctttccacgttcaatctcatgctaaatg 162  Q
    ||||| || |||||||||| ||||||||||||||||||||||| ||||| ||||| |||||||||||||| |||||||| |||||||||||| ||| ||     
T  22355 actcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaaa-gtttcattctaaaaatctttccaggttcaatctcattctacatt 22453  T
Q  163 ctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  22454 cttttctaatcattattagacatgttcaggcactcaaaag 22493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 200
Target Start/End: Complemental strand, 12670 - 12481
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcaggtt 107  Q
    |||||||||||||||  ||||||||||||||||||||| || ||| ||| || ||| || | ||||||||||||| ||||||||||||||||||||| |     
T  12670 caactcgtgcgacaagaatcgcatttaacctaaacaag-cattctgtaatactagtgcttgcgaggcgagagcctctgctcgccatggcgagttcag-tc 12573  T
Q  108 agatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||| |||||| |||||||||||   |||||||| |||||||||||| ||| || |||||||||||| ||| |||||||||||||||||||||    
T  12572 agattctccaaa-gtttcattctatg-tctttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaa 12481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 29148 - 28950
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||||  |||||||||||||||| |||||||| |||||| ||| ||||||||   |||  ||||||||||||| ||||||||||||| |||    
T  29148 ctcacatcaactcgaacgacaaagatcgcattcaacctaaa-aaggcattctgtaacacaaacgctcacgaggcgagagcctctgctcgccatggctagt 29050  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    || ||| |||||  | ||  |||||||||||  |||||| | |||||||||||| ||| || |||||||||||||||| |||||||||||||||||||||    
T  29049 tc-ggtcagattctctaaattttcattctaag-tctttctaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaa 28952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 7944 - 7841
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||| | | ||||      ||||| ||||||||||||||| ||||| |||||||||    
T  7944 ctcacatcaactcgtgcgacaaagatcgcatttaccct-aacaaggcattttgtaactgggcaactcgcgaggcgagagcctttactcgctatggcgagt 7846  T
Q  101 tcagg 105  Q
    |||||    
T  7845 tcagg 7841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 75; Significance: 9e-35; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 15422 - 15285
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||| ||||| ||||| ||||||||||||||||| ||||  ||||||||||| ||| || |    
T  15422 actcgcgaggcgagagcctctgctcgctatggcgagttcaggtcagattcccaaa-gtttcattctaaaatctatccagattcaatctcattctacattc 15324  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| | |||| ||||||||||||||||    
T  15323 tttcctaatcattattaaacatattcaggcactcaaaag 15285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 75; Significance: 9e-35; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 39074 - 39210
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| ||| | ||| | ||||||||| |||||||||||| |||||||||||| ||| || |    
T  39074 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaat-ccacaagtttcattc-aaaatctttccaggttcaatctcattctacattc 39171  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  39172 tttcctaatcattattagacatgttcaggcactcaaaag 39210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 75; Significance: 9e-35; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 17094 - 17231
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| ||||||||||||||||||||||| | |||  |||| |||| |||||||||||| |||| |||||||||||| ||| || |    
T  17094 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcatattctcaaa-gttttattctaaaatctatccaggttcaatctcattctacattc 17192  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  17193 tttcctaatcattattaaacatgttcaggcactcaaaag 17231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 8 - 172
Target Start/End: Complemental strand, 7633 - 7471
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcaggtt 107  Q
    |||||||| | |||| |||| ||||||||||||||| |||| ||| |||||||||| |||| ||||||||||||| |||| ||||||||||||||| ||     
T  7633 caactcgtactacaaggatctcatttaacctaaacatggcattctgtaacacaagtgctcgcgaggcgagagcctctgcttgccatggcgagttca-gtc 7535  T
Q  108 agatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaat 172  Q
    ||||| |||||| |||||||||| || |||||||| |||||||||||| ||| || ||||||||||    
T  7534 agattatccaaa-gtttcattct-aagtctttccaggttcaatctcatcctacattctttcctaat 7471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 75; Significance: 9e-35; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 8340 - 8202
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| | ||| || ||||||||| |||  ||| ||||||| ||||||||||| |||||||||| |||||||||||| ||| || |    
T  8340 actcgcgaggcgagagcctctactcaccgtggcgagtttaggccagaattccaaaagtttcattctacaatctttccaggttcaatctcatcctacattc 8241  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  8240 tttcctaatcattattagacatgttcaggcactcaaaag 8202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 7062 - 7261
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagta-ctcgggaggcgagagcctttgctcgccatggcgag 99  Q
    |||||||||||| |||||||||  |||||||||||||||||||||||| ||| ||||  |  || ||||  |||||||||||| | ||||||||||||||    
T  7062 ctcacatcaacttgtgcgacaagaatcgcatttaacctaaacaaggcattctgtaact-agttagctcgcaaggcgagagcctctactcgccatggcgag 7160  T
Q  100 ttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    ||||||||   ||  ||||  || |||||||||||||||||| |||||||||||| ||  |  |||||||||||||||| ||||||||||||||||||||    
T  7161 ttcaggttcagttcacaaaaatt-cattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaa 7259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 2313 - 2115
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||| ||||||  || ||||||||||||| |||||||| |||||| ||| |||||||    |||| ||||||||||||| |||||||||||||||||    
T  2313 ctcacataaactcgaacggcaaagatcgcattcaacctaaa-aaggcattctgtaacacacacgctcgcgaggcgagagcctctgctcgccatggcgagt 2215  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    || ||| |||||  | ||  |||||||||||  ||||| || |||||||||||| ||| || |||||||||||||||| |||||||||||||||||||||    
T  2214 tc-ggtcagattctctaaattttcattctaag-tcttttcaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaa 2117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 73; Significance: 1e-33; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 381 - 580
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||||| |||||||||||||||||||| ||| |||| || ||| ||||      ||||| ||||||||||||| |||||||||||||||||    
T  381 ctcacatcaactcgtacgacaaagatcgcatttaacataagcaagacattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagt 480  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||||   | |  ||||  || |||||||||||||||||| |||||||||||| ||  |  |||||||||||||||| ||||||||| |||||||||||    
T  481 tcaggtgcaactcacaaaaatt-cattctaaaatctttccaagttcaatctcattctccaatctttcctaatcattattagacatgtttaggcactcaaa 579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 73; Significance: 1e-33; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 70 - 202
Target Start/End: Original strand, 40176 - 40307
Alignment:
Q  70 gaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcct 169  Q
    ||||||||||||| |||||||| |||||||| |||||||||   ||||| ||||||||||| |||||||||| |||||||||||| ||  || |||||||    
T  40176 gaggcgagagcctctgctcgccgtggcgagtacaggttagaaa-ccaaaagtttcattctacaatctttccaggttcaatctcatcctccattctttcct 40274  T
Q  170 aatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||| |||||||||||||||||||||||    
T  40275 aatcattattagacatgttcaggcactcaaaag 40307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 26559 - 26662
Alignment:
Q  84 tgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagac 183  Q
    |||||||| |||||| ||||||| ||| | ||||| ||||||||||| |||||||||| ||| |||||||| ||| || |||||||||||||||| ||||    
T  26559 tgctcgccgtggcgacttcaggtcagaat-ccaaaagtttcattctacaatctttccaggtttaatctcatcctacattctttcctaatcattattagac 26657  T
Q  184 atgtt 188  Q
    |||||    
T  26658 atgtt 26662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 65 - 196
Target Start/End: Complemental strand, 59308 - 59179
Alignment:
Q  65 ctcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgct 164  Q
    |||| ||||||||||||| ||||||||||||||||||| ||| || ||  | ||  |||||||||||  ||||| || |||||||||||| ||| || ||    
T  59308 ctcgcgaggcgagagcctctgctcgccatggcgagttc-ggtcaggttctctaaattttcattctaag-tcttttcaggttcaatctcattctacattct 59211  T
Q  165 ttcctaatcattatgagacatgttcaggcact 196  Q
     ||||||||||||| |||||||||||||||||    
T  59210 gtcctaatcattattagacatgttcaggcact 59179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 39680 - 39601
Alignment:
Q  123 tcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    |||||||| | |||||||| |||||||||||| ||| || |||||||||||||||  ||||||||||||| |||||||||    
T  39680 tcattctacattctttccaggttcaatctcattctacattctttcctaatcattaatagacatgttcaggtactcaaaag 39601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 820 - 683
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| |||||||||||||  |||| || |||||||||||||| ||||||||||| ||| ||||||| ||||||| ||  ||||||||||| ||| || |    
T  820 actcgcgaggcgagagcctccgctcaccgtggcgagttcaggtcagatttccaaaagtt-cattctacaatcttttcagattcaatctcattctacattc 722  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  721 tttcctaatcattattagacatgttcaggcactcaaaag 683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 71; Significance: 2e-32; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 3783 - 3921
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| ||| | ||| | |||| |||||| |||| ||||| |||||||||||| ||| || |    
T  3783 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttgattctacaatcattccaggttcaatctcatcctacattc 3882  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  3883 tttcctaatcattattagacatgttcagacactcaaaag 3921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 656 - 793
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| | ||||||  ||||||||||| | ||||| ||||| ||||||||||||| |||||| | |||||||||||| ||| || |    
T  656 actcgcgaggcgagagcctctactcgccgcggcgagttcagttcagatt-ccaaaagtttcattctaaattctttctaggttcaatctcattctacattc 754  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||| ||||||||||| |||||||||||||||||||||||    
T  755 ttttctaatcattattagacatgttcaggcactcaaaag 793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 71; Significance: 2e-32; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 13405 - 13543
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| ||| | ||| | ||||||||||| ||||||| ||  ||||||||||| ||| || |    
T  13405 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatcttttcagattcaatctcatcctacattc 13504  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    |||||||||||| || |||||||||||||||||||||||    
T  13505 tttcctaatcataattagacatgttcaggcactcaaaag 13543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 34373 - 34571
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||| |  | |||||||||||||| |||||||| |||| | | | ||||||||  | ||| ||||||||||||| |||||||||||||||||    
T  34373 ctcacatcaactagaacaacaaagatcgcattcaacctaaa-aaggaattatgtaacacaaaaaatcgcgaggcgagagcctctgctcgccatggcgagt 34471  T
Q  101 tcaggttagatt-tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    || ||| ||||| ||||||  |||||||||||  ||||| || |||||||||||| ||| || |||||||||||||||| ||||||||||||||||||||    
T  34472 tc-ggtcagattctccaaat-tttcattctaag-tcttttcaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaa 34568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 20426 - 20563
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||| | ||||||| |||||| |||  |||||| ||||||||||||| |||||||| ||||||||| || ||| || |    
T  20426 actcgcgaggcgagagcctctgctcgtcgtggcgagctcaggtcagaactccaaaagtttcattctaaa-tctttccaggttcaatcttattctacattc 20524  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  20525 tttcctaatcattattagacatgttcaggcactcaaaag 20563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 70; Significance: 9e-32; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 15911 - 16109
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||||  ||||||||||||||||  ||||||| |||||| ||| ||||||||   |||| ||||||||||||| |||||||||||||||||    
T  15911 ctcacatcaactcgaacgacaaagatcgcattccacctaaa-aaggcattctgtaacacaaaagctcgcgaggcgagagcctctgctcgccatggcgagt 16009  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    || ||| |||||  | ||  ||||||| |  | ||||| || |||||||||||| ||| || |||||||||||||||| |||||| ||||||||||||||    
T  16010 tc-ggtcagattctctaaattttcatt-ttgagtcttttcaggttcaatctcattctacattctttcctaatcattattagacatattcaggcactcaaa 16107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 18205 - 18165
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaacaaggca 48  Q
    |||||||  |||||||||| |||||||||||||||||||||    
T  18205 caactcgcacgacaaagattgcatttaacctaaacaaggca 18165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 70; Significance: 9e-32; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 45660 - 45460
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagta-ctcgggaggcgagagcctttgctcgccatggcgag 99  Q
    |||||||||||||||||||||||||||||||||| |||||||||| || ||| ||||  |  || |||| ||||||||||||| | ||||||||||||||    
T  45660 ctcacatcaactcgtgcgacaaagatcgcatttatcctaaacaagacattctgtaac-tagttagctcgcgaggcgagagcctctactcgccatggcgag 45562  T
Q  100 ttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    |||||||   |||  ||||   ||||||||||| |||| ||| |||||||||||| |   |  |||||||||||||||| |||||| |||||||||||||    
T  45561 ttcaggtacaattcacaaaaaattcattctaaagtcttaccaggttcaatctcattccccaatctttcctaatcattattagacatattcaggcactcaa 45462  T
Q  200 aa 201  Q
    ||    
T  45461 aa 45460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 124898 - 125033
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| ||| | ||| | ||||||||||| |||||||||| ||||   ||||| ||| || |    
T  124898 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttc---ctcatcctacattc 124994  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  124995 tttcctaatcattattagacatgttcaggcactcaaaag 125033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 122 - 201
Target Start/End: Original strand, 62932 - 63011
Alignment:
Q  122 ttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    ||||||||||||| |||||| |||||||||||| ||  |  |||||||||||||||| ||||||||||| ||||||||||    
T  62932 ttcattctaaaatatttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcatgcactcaaaa 63011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1257 (Bit Score: 68; Significance: 1e-30; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 2086 - 1991
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggc 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||| ||| | ||||| |||||    
T  2086 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaacacaagtactcgcgaggcgagaccctctactcgctatggc 1991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 24109 - 23972
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||  |||||||||||||| ||| | ||| | ||||||||||| ||| |||||| |||||||||||| ||| ||      
T  24109 actcgcgaggcgagagcctctgctcgctgtggcgagttcaggtcagaatcccacaagtttcattctacaat-tttccaggttcaatctcatcctacattt 24011  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  24010 tttcctaatcattattagacatgttcaggcactcaaaag 23972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 339758 - 339621
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| ||||||||||| || ||||| ||||| ||| ||||||| |||||||||| |||||||||||| ||| || |    
T  339758 actcgcgaggcgagagcctctgctcgccgtggcgagttcatgtcagattcccaaaagtt-cattctacaatctttccaggttcaatctcatcctacattc 339660  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
     |||||||||||||| |||||  ||||||||||||||||    
T  339659 attcctaatcattattagacaaattcaggcactcaaaag 339621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 72 - 201
Target Start/End: Original strand, 226 - 354
Alignment:
Q  72 ggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaa 171  Q
    ||||||||||| | |||||  |||||||||||||| |||  || ||| ||||||||||||| |||||||| |||||||||||| ||| || |||||||||    
T  226 ggcgagagcctctactcgctgtggcgagttcaggtcagaactcaaaaagtttcattctaaa-tctttccaggttcaatctcatcctacattctttcctaa 324  T
Q  172 tcattatgagacatgttcaggcactcaaaa 201  Q
    ||||||| ||||||||||||||||||||||    
T  325 tcattattagacatgttcaggcactcaaaa 354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 17794 - 17678
Alignment:
Q  86 ctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacat 185  Q
    |||||| |||||||||||||| ||| | ||| | ||||||||||| ||||| |||| |||||||||||| ||| || |||||||||||||||| ||||||    
T  17794 ctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctatccaggttcaatctcatcctacattctttcctaatcattattagacat 17695  T
Q  186 gttcaggcactcaaaag 202  Q
    |||||||||||||||||    
T  17694 gttcaggcactcaaaag 17678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 64; Significance: 3e-28; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 13019 - 13122
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| | | ||||||||||||||| ||||||||||||  | ||||| ||||||| |    
T  13019 ctcacatcaactcgtgcgacaaagattgcatttaacctaaacaaggcattttgtaacacaagtactcgtgaggcgagagcccctactcgctatggcgatt 13118  T
Q  101 tcag 104  Q
    ||||    
T  13119 tcag 13122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 70 - 202
Target Start/End: Complemental strand, 51686 - 51554
Alignment:
Q  70 gaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcct 169  Q
    |||| |||||||| |||||||| |||||||||||||| | | | ||| | ||||||||| | |||||||||| |||||||||||| ||| || || ||||    
T  51686 gaggtgagagcctctgctcgccgtggcgagttcaggtcaaaatcccacaagtttcattcgacaatctttccaggttcaatctcatcctacattctctcct 51587  T
Q  170 aatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||| | |||||||||||||||||||||    
T  51586 aatcattattaaacatgttcaggcactcaaaag 51554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 32788 - 32983
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagta-ctcgggaggcgagagcctttgctcgccatggcgag 99  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||| ||| ||||    ||| |||| |||||||| |||| | ||||||||||||||    
T  32788 ctcacatcaactcgtgcgacaaagatcgcatttaacccaa-caaggcattctgtaactgg-gtagctcgcgaggcgagggcctctactcgccatggcgag 32885  T
Q  100 ttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactca 198  Q
    |||||||   | | |||||  |  |||||| | |   ||||| |||||||||||  ||| |  |||||||||||||||| | |||||||||||||||||    
T  32886 ttcaggtgtaactcccaaaaatc-cattcttagactattccaagttcaatctcaatctagaatctttcctaatcattattacacatgttcaggcactca 32983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 9328 - 9527
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagta-ctcgggaggcgagagcctttgctcgccatggcgag 99  Q
    |||||| ||||||||||||||| ||||||||||||||||  ||||||| ||| ||| |   ||| |||| ||||||||||||| | ||||||||||||||    
T  9328 ctcacaacaactcgtgcgacaaggatcgcatttaacctag-caaggcattctgtaa-atgggtagctcgcgaggcgagagcctctactcgccatggcgag 9425  T
Q  100 ttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    ||||||||   ||  ||||  || ||||||||| |||||||| || ||||||||  ||| || ||||||||||| |||| |||| |||||||||||||||    
T  9426 ttcaggttcagttcacaaaaatt-cattctaaactctttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaa 9524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 18710 - 18628
Alignment:
Q  120 gtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||| |||||||||| |||||||||||| ||| || |||||||||||||||| |||||||||||||||||||||||    
T  18710 gtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaag 18628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 40226 - 40362
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| | |||||| |||||||||||||| ||||||||||| | ||||||||| ||||| | || |||||||||||| ||| || |    
T  40226 actcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagatttccaaaag-ttcattctacaatctgt-caggttcaatctcatcctacattc 40323  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
     |||||||||||||  | |||||||||||||||||||||    
T  40324 cttcctaatcattaataaacatgttcaggcactcaaaag 40362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 19517 - 19716
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||| ||||||||| ||||||||||||| ||| |||| || ||| ||||      | ||| ||||||||||||| |||||||||||||||||    
T  19517 ctcacatcaacttgtgcgacaaggatcgcatttaacataagcaagacattctgtaactgggtcattcgcgaggcgagagcctctgctcgccatggcgagt 19616  T
Q  101 tcaggtt--agatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactca 198  Q
    ||||||   | |  |  |||   |||||||||||||||||||| |||||||||||| ||  |  | |||||||||||||| |||||||||||||||||||    
T  19617 tcaggtgcaacacataaaaa---ttcattctaaaatctttccaggttcaatctcattctccaatccttcctaatcattattagacatgttcaggcactca 19713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 160936 - 161135
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtac-tcgggaggcgagagcctttgctcgccatggcgag 99  Q
    ||||||||||||||||||||||||||| |||||| ||||| |||| || ||| ||||  |  ||| ||| |||| |||||||| | |||||||||||||     
T  160936 ctcacatcaactcgtgcgacaaagatcacatttatcctaaccaagacattctgtaact-agttacctcgtgaggtgagagcctctactcgccatggcgac 161034  T
Q  100 ttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    ||||||||   ||  ||||  || ||||||||| ||| |||| |||||||||||| ||  |  |||||||||||||||| ||||||||||||||||||||    
T  161035 ttcaggttcagttcacaaaaatt-cattctaaagtctctccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaa 161133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 70 - 202
Target Start/End: Complemental strand, 5923 - 5791
Alignment:
Q  70 gaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcct 169  Q
    ||||||||||||| |||||||| |||| ||||||||| ||| | ||  |  |||||||| | |||||| ||| |||||||||||| ||| |  |||||||    
T  5923 gaggcgagagcctctgctcgccgtggcaagttcaggtcagaatcccgcaaatttcattcaataatcttcccaggttcaatctcatcctacaatctttcct 5824  T
Q  170 aatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||| |||||||||||||||||||||||    
T  5823 aatcattattagacatgttcaggcactcaaaag 5791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 130158 - 130357
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagta-ctcgggaggcgagagcctttgctcgccatggcgag 99  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| | | ||||  |  || |||| ||||||||||||| ||||||||||||||||    
T  130158 ctcacatcaactcgtgcgacaaagatcgcatttatcctaaacaaggcattttgtaac-tagttagctcgcgaggcgagagcctctgctcgccatggcgag 130256  T
Q  100 ttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    || ||||   ||| |||||   | |||||| |||   ||||| |||||||||||  ||| |  |||| |||||||| |  ||||||||||||||||||||    
T  130257 tttaggtgtaattcccaaa-aatccattcttaaactattccaggttcaatctcaatctagaatcttttctaatcataactagacatgttcaggcactcaa 130355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 70 - 202
Target Start/End: Original strand, 8794 - 8926
Alignment:
Q  70 gaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcct 169  Q
    ||||||||||||| | || ||| |||||||||||||| ||| | ||| | ||| |||| || |||||||| | |||||||||||| ||| || |||||||    
T  8794 gaggcgagagcctctactggccgtggcgagttcaggtcagaatcccacaagttccattttacaatctttctaggttcaatctcatcctacattctttcct 8893  T
Q  170 aatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||| ||| |||||| ||||||||||||||||    
T  8894 aatcactattagacatattcaggcactcaaaag 8926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 2825 - 2755
Alignment:
Q  132 aatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    |||||||||| |||||||||||| ||| || |||||||||||||||| |||||||||||||||||||||||    
T  2825 aatctttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaag 2755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 50; Significance: 8e-20; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 10409 - 10305
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||| | |||||  |  ||||| ||||||||||||| | |||||  ||||||||    
T  10409 ctcacatcaactcgtgcaacaaagatcgcatttaacct-aacaaggcagtatgtaacaggacaactcgcgaggcgagagcctctactcgctttggcgagt 10311  T
Q  101 tcaggt 106  Q
    ||||||    
T  10310 tcaggt 10305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 201
Target Start/End: Complemental strand, 10277 - 10239
Alignment:
Q  163 ctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    |||| ||||||||||| ||||||||||||||||||||||    
T  10277 ctttactaatcattattagacatgttcaggcactcaaaa 10239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 13870 - 13935
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||| |||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||    
T  13870 ttccaggttcaatctcatgctacatcctttcctaatcattattagacatgttcaggcactcaaaag 13935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 50; Significance: 8e-20; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 6864 - 6969
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||       || | |||||||| |||| | |||||||||||||||    
T  6864 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaatgcattctataactggttagcttgcgaggcgagggcctctactcgccatggcgagt 6963  T
Q  101 tcaggt 106  Q
    ||||||    
T  6964 tcaggt 6969  T

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Target: scaffold0333; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 14244 - 14349
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||       || | |||||||| |||| | |||||||||||||||    
T  14244 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaatgcattctataactggttagcttgcgaggcgagggcctctactcgccatggcgagt 14343  T
Q  101 tcaggt 106  Q
    ||||||    
T  14344 tcaggt 14349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 50; Significance: 8e-20; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 125 - 202
Target Start/End: Original strand, 16461 - 16538
Alignment:
Q  125 attctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    |||||| |||||||||| |||||||||| | ||| || |||||||||||||||| |||||||||||||||||||||||    
T  16461 attctacaatctttccaggttcaatctcgtcctacattctttcctaatcattattagacatgttcaggcactcaaaag 16538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 32709 - 32629
Alignment:
Q  122 ttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||||| || |||||||||||| ||  |  | |||||||||||||| |||||||||||| ||||||||||    
T  32709 ttcattctaaaatctttacaggttcaatctcattctccagtccttcctaatcattattagacatgttcagacactcaaaag 32629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 46296 - 46376
Alignment:
Q  122 ttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||||| || |||||||||||| ||  |  | |||||||||||||| |||||||||||| ||||||||||    
T  46296 ttcattctaaaatctttacaggttcaatctcattctccagtccttcctaatcattattagacatgttcagacactcaaaag 46376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 857 - 730
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| ||| | ||| | |||||| ||||            |||||||||||| |||||| |    
T  857 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcaatctag-----------gttcaatctcatcctaaattc 769  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  768 tttcctaatcattattagacatgttcaggcactcaaaag 730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 64 - 200
Target Start/End: Original strand, 23196 - 23331
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| |||||||| |||| |||||||  ||||||| |||| | ||| |||||||  ||  |||||| ||||||||||  | ||||||||| ||| || |    
T  23196 actcgcgaggcgagggcctctgctcgctgtggcgagctcagttcagaattccaaaa-ttcaattctacaatctttccagatccaatctcatcctacattc 23294  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||||||||||||| |||||||||||||||||||||    
T  23295 tttcctaatcattattagacatgttcaggcactcaaa 23331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 70 - 202
Target Start/End: Original strand, 4843 - 4974
Alignment:
Q  70 gaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcct 169  Q
    ||||||||||||||||||||||||||||||  |||||  |||   |||| ||| ||||||||||||||| || |||||||||||| ||| |  ||| |||    
T  4843 gaggcgagagcctttgctcgccatggcgaggacaggtctgatcgacaaaagtt-cattctaaaatcttttcaggttcaatctcattctacaatcttccct 4941  T
Q  170 aatcattatgagacatgttcaggcactcaaaag 202  Q
    | ||||||  ||||||||| |||||||||||||    
T  4942 agtcattaatagacatgtttaggcactcaaaag 4974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 8723 - 8824
Alignment:
Q  2 tcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagtt 101  Q
    ||||||||||||||||||||||| || |||||||||| ||||||||| ||| |  |||||| ||||| |||||||| |||| | ||||| ||||||||||    
T  8723 tcacatcaactcgtgcgacaaaggtcacatttaacct-aacaaggcattctgtctcacaaggactcgcgaggcgagggcctctactcgctatggcgagtt 8821  T
Q  102 cag 104  Q
    |||    
T  8822 cag 8824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 6787 - 6987
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||| | | ||||      | ||| |||| ||| ||||   |||||||||||||||    
T  6787 ctcacatcaacttgtgcgacaaagatcgcatttatcctaaacaaggcattttgtaactagtcaattcgcgaggggagggcctccactcgccatggcgagt 6886  T
Q  101 tcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||||   | | ||| | ||||| |||| |||   ||||| |||||||||||  ||  |  |||||||||| ||||| |||||||| ||||||||||||    
T  6887 tcaggtataactcccacaagtttcgttcttaaactattccaggttcaatctcaatctccaatctttcctaattattattagacatgtccaggcactcaaa 6986  T
Q  201 a 201  Q
    |    
T  6987 a 6987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 202
Target Start/End: Complemental strand, 861 - 733
Alignment:
Q  63 tactcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatg 162  Q
    |||||| ||||||||||||| |||||||| |||||||||||||| ||| ||||| | |||| ||||           || |||||||||||| ||| ||     
T  861 tactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccacaagtttaattc-----------caggttcaatctcatcctacatt 773  T
Q  163 ctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  772 ctttcctaatcattattagacatattcaggcactcaaaag 733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 10172 - 10107
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||| |||||||||||| ||| || |||||||||||||||| |||||||||||||||||||||||    
T  10172 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaag 10107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 202
Target Start/End: Complemental strand, 764 - 632
Alignment:
Q  70 gaggcgagagcctttgctcgccatggcgagttcaggttagatttccaa-acgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcc 168  Q
    |||||| || ||| ||||||||||||||||||||||| |||||||||| | ||||||||||  | |    ||| |||||||||| | ||| |  ||||||    
T  764 gaggcgggaacctctgctcgccatggcgagttcaggtcagatttccaacaagtttcattctctactaaa-ccaggttcaatctcgttctacaatctttcc 666  T
Q  169 taatcattatgagacatgttcaggcactcaaaag 202  Q
    |||||||||| |||||||||||||||||||||||    
T  665 taatcattattagacatgttcaggcactcaaaag 632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 11259 - 11194
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||| |||||||||||| ||| || |||||||||||||||| |||||||||||||||||||||||    
T  11259 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaag 11194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 13822 - 13856
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaac 42  Q
    ||||||| |||||||||||||||||||||||||||    
T  13822 caactcgcgcgacaaagatcgcatttaacctaaac 13856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 141
Target Start/End: Original strand, 28144 - 28220
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttcca 141  Q
    ||||| |||||||||||||||||||||| |||||||||||||| ||| ||| ||| |||||||||| |||||||||||    
T  28144 actcgcgaggcgagagcctttgctcgccgtggcgagttcaggtcagaattcaaaaagtttcattct-aaatctttcca 28220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 28928 - 28987
Alignment:
Q  143 gttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    |||||||||||| ||| || |||||||||||||||| ||||||||||||| |||||||||    
T  28928 gttcaatctcattctacattctttcctaatcattattagacatgttcaggaactcaaaag 28987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 3195 - 3382
Alignment:
Q  13 cgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcaggttagatt 112  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||      | ||  |||||||| |||| | |||||||||||||||||||||   | |    
T  3195 cgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaactagtcaattcacgaggcgagggcctctactcgccatggcgagttcaggtataact 3294  T
Q  113 tccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
     ||| | | ||| |||| |||   ||||| |||||||||||  ||  |  |||||||||||||||| ||||||||||||||||||||||    
T  3295 cccacaag-ttcgttcttaaactattccaggttcaatctcaatctccaatctttcctaatcattattagacatgttcaggcactcaaaa 3382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 4877 - 4814
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||| |||||||||||| ||| || |||||||||||||||| |||||||||||||||||||||    
T  4877 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaa 4814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 39790 - 39864
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttc 139  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| ||||||||||| | ||||||||| ||||||||    
T  39790 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaag-ttcattctacaatctttc 39864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 64 - 139
Target Start/End: Complemental strand, 75022 - 74948
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttc 139  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| ||||||||||| | ||||||||| ||||||||    
T  75022 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaag-ttcattctacaatctttc 74948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 12243 - 12379
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| |||| |||||||| | ||||||||||||||||||||| || ||||||||   |||||||| || |  | ||| |||||||||||| ||| || |    
T  12243 actcgcgaggtgagagcctctactcgccatggcgagttcaggtcag-tttccaaaaagttcattcttaattaat-ccaggttcaatctcattctacattc 12340  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| | |||| ||||| ||||||||||    
T  12341 tttcctaatcattattaaacatattcagacactcaaaag 12379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 4)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 318 - 376
Alignment:
Q  144 ttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||| ||| || |||||||||||||||| |||||||||||||||||||||||    
T  318 ttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaag 376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 5094 - 5152
Alignment:
Q  144 ttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||| ||| || |||||||||||||||| |||||||||||||||||||||||    
T  5094 ttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaag 5152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 255 - 291
Alignment:
Q  70 gaggcgagagcctttgctcgccatggcgagttcaggt 106  Q
    ||||||||||||| |||||||||||||||||||||||    
T  255 gaggcgagagcctctgctcgccatggcgagttcaggt 291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 5031 - 5067
Alignment:
Q  70 gaggcgagagcctttgctcgccatggcgagttcaggt 106  Q
    ||||||||||||| |||||||||||||||||||||||    
T  5031 gaggcgagagcctctgctcgccatggcgagttcaggt 5067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 15700 - 15598
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||| ||| ||||       |||| |||||||| |||| | |||||||||||||||    
T  15700 ctcacatcaactcgtgcgacaaagatcacatttaacataaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccatggcgagt 15601  T
Q  101 tca 103  Q
    |||    
T  15600 tca 15598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 13335 - 13278
Alignment:
Q  145 tcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    |||||||||| ||| || |||||||||||||||| |||||||||||||||||||||||    
T  13335 tcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaag 13278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 10780 - 10978
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagt-actcgggaggcgagagcctttgctcgccatggcgag 99  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||| | |  |||  | || ||||| ||||||||||||| | ||||| ||||||||    
T  10780 ctcacatcaactcgtgcgacagagatcgcatttaacct-aacaaggcattttggaac-taggtaactcgcgaggcgagagcctctactcgctatggcgag 10877  T
Q  100 ttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaa 199  Q
    |||||||   | |  ||||   |||||||| |||   ||||| |||||||||||  |||    |||||||||||||||| | ||||||||||||||||||    
T  10878 ttcaggtgtaactcacaaa-aattcattcttaaactattccaggttcaatctcagtctaggatctttcctaatcattattacacatgttcaggcactcaa 10976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 6560 - 6504
Alignment:
Q  140 cacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcact 196  Q
    ||||||||||||||| ||| || |||||||||||||||| |||||||||||||||||    
T  6560 cacgttcaatctcattctacattctttcctaatcattattagacatgttcaggcact 6504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 2513 - 2457
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataac 57  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||| ||| ||||    
T  2513 ctcacatcaacttgtgcgacaaagatcgcatttatcctaaacaaggcattctgtaac 2457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 163 - 201
Target Start/End: Complemental strand, 2353 - 2315
Alignment:
Q  163 ctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  2353 ctttcctaatcattattagacatgttcaggcactcaaaa 2315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 13524 - 13651
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| ||| | ||| | |||||||||           || ||||| |||||| ||| || |    
T  13524 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatgccacaagtttcattc-----------caggttcagtctcatcctacattc 13612  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  13613 tttcctaatcattattagacattttcaggcactcaaaag 13651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 202
Target Start/End: Complemental strand, 20226 - 20096
Alignment:
Q  70 gaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgctttcct 169  Q
    ||||||||||||| | ||||||||||||||||||||| || || | ||| ||| |||||| || |  | ||| |||||||||||| ||| || |||||||    
T  20226 gaggcgagagcctctactcgccatggcgagttcaggtcagcttccaaaaagtt-cattcttaattaat-ccaggttcaatctcattctacattctttcct 20129  T
Q  170 aatcattatgagacatgttcaggcactcaaaag 202  Q
    | ||||||| | ||||||||||| |||||||||    
T  20128 actcattattaaacatgttcaggaactcaaaag 20096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 16660 - 16719
Alignment:
Q  143 gttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    |||||||||| | ||| || |||||||||||||||| |||||||||||||||||||||||    
T  16660 gttcaatctcgtcctacattctttcctaatcattattagacatgttcaggcactcaaaag 16719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 7926 - 7822
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagt-actcgggaggcgagagcctttgctcgccatggcgag 99  Q
    |||||||||| || |||||||||||||||||||||||| | ||||||| |||  |||| | || ||||| ||||||||||||| | ||||| ||||||||    
T  7926 ctcacatcaattcttgcgacaaagatcgcatttaacct-agcaaggcattctggaaca-aggtaactcgcgaggcgagagcctctactcgctatggcgag 7829  T
Q  100 ttcaggt 106  Q
    |||||||    
T  7828 ttcaggt 7822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 200
Target Start/End: Original strand, 1227 - 1352
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||| ||| | ||| | |||||||||           || |||||||||||| ||| || |    
T  1227 actcgtgaggcgagagcctctgctcgccatggcgagttctggtcagaatcccacaagtttcattc-----------caggttcaatctcatcctacattc 1315  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||||||||||||| ||  |||||||||||||||||    
T  1316 tttcctaatcattattagtaatgttcaggcactcaaa 1352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 3)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 200
Target Start/End: Original strand, 3794 - 3919
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||| ||||||||| ||||||||||||||||||||||| ||| | ||| | |||||||||           || |||||||||||| ||| || |    
T  3794 actcgcgagacgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattc-----------caggttcaatctcatcctacattc 3882  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||||||||||||  || ||||||||||||||||||    
T  3883 tttcctaatcattactagtcatgttcaggcactcaaa 3919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 200
Target Start/End: Original strand, 7858 - 7983
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttccaaacgtttcattctaaaatctttccacgttcaatctcatgctaaatgc 163  Q
    ||||| ||| ||||||||| ||||||||||||||||||||||| ||| | ||| | |||||||||           || |||||||||||| ||| || |    
T  7858 actcgcgagacgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattc-----------caggttcaatctcatcctacattc 7946  T
Q  164 tttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||||||||||||  || ||||||||||||||||||    
T  7947 tttcctaatcattactagtcatgttcaggcactcaaa 7983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 27371 - 27313
Alignment:
Q  143 gttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    |||||||||||  |||||  ||| |||||||||||| | ||||||||||||||||||||    
T  27371 gttcaatctcaaactaaaaacttgcctaatcattattatacatgttcaggcactcaaaa 27313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 5223 - 5288
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||| |||||||||||| ||| || |||||||||||||||| |||||| |||| |||||||||||    
T  5223 ttccaggttcaatctcatcctacattctttcctaatcattattagacatcttcatgcactcaaaag 5288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 13192 - 13296
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||| |||||||||| |||||||||| ||||||||| ||| ||||       |||| |||||||| |||| | |||||||||||||||    
T  13192 ctcacatcaactcgtgtgacaaagatcacatttaacct-aacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccatggcgagt 13290  T
Q  101 tcaggt 106  Q
    ||||||    
T  13291 tcaggt 13296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 18105 - 18002
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||||||||||||||| || |||||||||||| ||||| | ||| |  ||| ||  |||| |||||||||||||   ||||| |||||||||    
T  18105 ctcacatcaactcgtgcgacaaaggtcacatttaacctaa-caaggtattctgtctcactagggctcgcgaggcgagagcctccactcgctatggcgagt 18007  T
Q  101 tcagg 105  Q
    |||||    
T  18006 tcagg 18002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 201
Target Start/End: Original strand, 13352 - 13390
Alignment:
Q  163 ctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  13352 ctttcctaatcataattagacatgttcaggcactcaaaa 13390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 15211 - 15146
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||| |||||||||||| ||| || |||||||||||||||| |||||| || |||||||||||||    
T  15211 ttccaggttcaatctcatcctacattctttcctaatcattattagacatattaaggcactcaaaag 15146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 32439 - 32504
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||| |||||||||||| | | || |||||||| ||||||| |||||||||||||||||||||||    
T  32439 ttccaggttcaatctcatcccacattctttcctagtcattattagacatgttcaggcactcaaaag 32504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 37; Significance: 0.000000000004; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 1335 - 1390
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataac 57  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||| ||| ||||    
T  1335 ctcacatcaactcgtgtgacaaagatcgcatttaacct-aacaaggcattctgtaac 1390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 37; Significance: 0.000000000004; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 259 - 362
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    |||||||||||| ||||||||||| || |||||||||| ||||||| | ||| |  ||||||  |||  ||||||||||||| | ||||| |||||||||    
T  259 ctcacatcaacttgtgcgacaaaggtcacatttaacct-aacaaggtattctgtctcacaagggctcacgaggcgagagcctctactcgctatggcgagt 357  T
Q  101 tcagg 105  Q
    |||||    
T  358 tcagg 362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 37; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 900 - 856
Alignment:
Q  4 acatcaactcgtgcgacaaagatcgcatttaacctaaacaaggca 48  Q
    ||||||||| | |||||||||||||||||||||||||||||||||    
T  900 acatcaacttgcgcgacaaagatcgcatttaacctaaacaaggca 856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 201
Target Start/End: Complemental strand, 737 - 699
Alignment:
Q  163 ctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  737 ctttcctaatcattattatacatgttcaggcactcaaaa 699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 37; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 5988 - 5944
Alignment:
Q  4 acatcaactcgtgcgacaaagatcgcatttaacctaaacaaggca 48  Q
    ||||||||| | |||||||||||||||||||||||||||||||||    
T  5988 acatcaacttgcgcgacaaagatcgcatttaacctaaacaaggca 5944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 37; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 14565 - 14509
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataac 57  Q
    |||||||||||| ||||||| ||||||||||||| ||||||||||||| ||| ||||    
T  14565 ctcacatcaacttgtgcgaccaagatcgcatttatcctaaacaaggcattctgtaac 14509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 10540 - 10595
Alignment:
Q  147 aatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    |||||||| ||| || |||||||||||||||| ||||||||||| |||||||||||    
T  10540 aatctcatcctacattctttcctaatcattattagacatgttcatgcactcaaaag 10595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 10497 - 10568
Alignment:
Q  84 tgctcgccatggcgagttcaggttaga-tttccaaacgtttcattctaaaatctttccacgttcaatctcat 154  Q
    |||||||| |||||||||||||| ||| |||  |||  ||||||||||||||||||||| ||||||||||||    
T  10497 tgctcgccgtggcgagttcaggtcagaatttgaaaatttttcattctaaaatctttccaggttcaatctcat 10568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 51954 - 52017
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||| |||||||||| | ||| || |||||||||||||||| |||| ||||||||||||||||    
T  51954 ttccaggttcaatctcgtcctacattctttcctaatcattattagacttgttcaggcactcaaa 52017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 110
Target Start/End: Original strand, 51892 - 51938
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttaga 110  Q
    ||||| ||||||||||||| |||||||| ||||||| ||||||||||    
T  51892 actcgcgaggcgagagcctctgctcgccgtggcgagctcaggttaga 51938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 105
Target Start/End: Original strand, 267909 - 268007
Alignment:
Q  6 atcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagttcagg 105  Q
    ||||||||||||||||||| || |||||||||||| |||||   ||| |  |||||| ||||| ||||||||||||| | ||||| ||| ||||||||||    
T  267909 atcaactcgtgcgacaaaggtcacatttaacctaa-caaggtgttctgtctcacaaggactcgcgaggcgagagcctctactcgctatgccgagttcagg 268007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 38571 - 38672
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||||||||||||| |||| || |||||||||  ||||||| | ||| |  ||||||  |||| ||||||||||||| | ||||| |||||||||    
T  38571 ctcacatcaactcgtgcgataaaggtctcatttaacc-caacaaggtattctgtctcacaagggctcgcgaggcgagagcctctactcgctatggcgagt 38669  T
Q  101 tca 103  Q
    |||    
T  38670 tca 38672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 6150 - 6054
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaagtactcgggaggcgagagcctttgctcgccatggcga 98  Q
    |||||||||||||||||||||||| || |||||||||| ||||||| | |||||  ||| ||  |||| |||| |||||||| | |||||| ||||||    
T  6150 ctcacatcaactcgtgcgacaaaggtcacatttaacct-aacaaggtattctatctcactagggctcgcgaggtgagagcctctactcgccttggcga 6054  T

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Target: scaffold0064 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 47361 - 47426
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaag 202  Q
    ||||| |||||||||||| ||| || | |||||||||||||| |||||| ||||| ||||||||||    
T  47361 ttccaggttcaatctcatcctacattcattcctaatcattattagacatattcagacactcaaaag 47426  T

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Target: scaffold0320 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 12381 - 12445
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    ||||| |||||||||||  |||||  |||||||||||||||| | |||||||||| |||||||||    
T  12381 ttccaggttcaatctcaatctaaaatctttcctaatcattattatacatgttcagacactcaaaa 12445  T

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Target: scaffold0098 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 26847 - 26887
Alignment:
Q  8 caactcgtgcgacaaagatcgcatttaacctaaacaaggca 48  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  26847 caactcgcgcgacaaagatcacatttaacctaaacaaggca 26887  T

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Target: scaffold0088 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 21276 - 21340
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    ||||| || ||||||||| ||| || ||||| |||||||||| ||||||||||||||||| ||||    
T  21276 ttccaggtacaatctcatcctacattctttcataatcattattagacatgttcaggcactaaaaa 21340  T

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Target: scaffold0046 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11542 - 11602
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctataacacaa 61  Q
    ||||||||||||||  |||||||||||||||| |||||||| | |||| ||| ||||||||    
T  11542 ctcacatcaactcgaacgacaaagatcgcattcaacctaaaaagggcattctgtaacacaa 11602  T

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Target: scaffold1403 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 802 - 841
Alignment:
Q  1 ctcacatcaactcgtgcgacaaagatcgcatttaacctaa 40  Q
    |||||||||||||||||||||||| || ||||||||||||    
T  802 ctcacatcaactcgtgcgacaaaggtctcatttaacctaa 841  T

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Target: scaffold0490 (Bit Score: 32; Significance: 0.000000004; HSPs: 2)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 2327 - 2390
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||| |||||||||||| ||| || | |||||||| ||||| ||||| |||||||||||||||    
T  2327 ttccaggttcaatctcatcctacattccttcctaattattattagacacgttcaggcactcaaa 2390  T

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Target: scaffold0490; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 2265 - 2307
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggt 106  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||    
T  2265 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 2307  T

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Target: scaffold0309 (Bit Score: 32; Significance: 0.000000004; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 6985 - 7048
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaa 200  Q
    ||||| |||||||||||| ||| || | |||||||| ||||| ||||| |||||||||||||||    
T  6985 ttccaggttcaatctcatcctacattccttcctaataattattagacacgttcaggcactcaaa 7048  T

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Target: scaffold0309; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 6923 - 6965
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggt 106  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||    
T  6923 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 6965  T

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Target: scaffold0278 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 201
Target Start/End: Original strand, 6005 - 6043
Alignment:
Q  163 ctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  6005 ctttcctaatcattattagacctgttcaggcactcaaaa 6043  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 80730 - 80788
Alignment:
Q  143 gttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    |||||||||||  |||||  ||| |||||||||||| | ||||||||||||||||||||    
T  80730 gttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcaaaa 80788  T

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Target: scaffold0123 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 25567 - 25632
Alignment:
Q  136 tttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    |||||| |||||||||||  |||||  ||| |||||||||||| | |||| |||||||||||||||    
T  25567 tttccaagttcaatctcaatctaaaaacttgcctaatcattattatacattttcaggcactcaaaa 25632  T

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Target: scaffold0116 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 43519 - 43455
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    ||||| |||||||||||  ||| |  |||| |||||||| || ||||||||||||||||||||||    
T  43519 ttccaggttcaatctcaatctagaatcttttctaatcataattagacatgttcaggcactcaaaa 43455  T

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Target: scaffold0116; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 47439 - 47375
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    ||||| |||||||||||  ||| |  |||| |||||||| || ||||||||||||||||||||||    
T  47439 ttccaggttcaatctcaatctagaatcttttctaatcataattagacatgttcaggcactcaaaa 47375  T

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Target: scaffold0106 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 1599 - 1651
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttcca 116  Q
    ||||| ||||||||||||| |||||||| | |||||||||| ||||| |||||    
T  1599 actcgcgaggcgagagcctctgctcgccgtcgcgagttcagtttagaattcca 1651  T

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Target: scaffold0106; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 7576 - 7628
Alignment:
Q  64 actcgggaggcgagagcctttgctcgccatggcgagttcaggttagatttcca 116  Q
    ||||| ||||||||||||| |||||||| | |||||||||| ||||| |||||    
T  7576 actcgcgaggcgagagcctctgctcgccgtcgcgagttcagtttagaattcca 7628  T

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Target: scaffold0076 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 24255 - 24191
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    ||||| |||||||||||  ||||| |||| |||||||||||| | | || |||||||||||||||    
T  24255 ttccaggttcaatctcaatctaaaagcttgcctaatcattattatatatattcaggcactcaaaa 24191  T

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Target: scaffold0044 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 62552 - 62592
Alignment:
Q  60 aagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||| ||||||||||| | |||||||||||||||||    
T  62552 aagtactcgcgaggcgagagcatctgctcgccatggcgagt 62592  T

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Target: scaffold0017 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 192797 - 192757
Alignment:
Q  60 aagtactcgggaggcgagagcctttgctcgccatggcgagt 100  Q
    ||||||||| ||||||||||| | |||||||||||||||||    
T  192797 aagtactcgcgaggcgagagcatctgctcgccatggcgagt 192757  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 227878 - 227942
Alignment:
Q  137 ttccacgttcaatctcatgctaaatgctttcctaatcattatgagacatgttcaggcactcaaaa 201  Q
    ||||| |||||||||||  ||| |  |||||||||||||||| | ||||||| ||||||||||||    
T  227878 ttccaggttcaatctcaatctagaatctttcctaatcattattatacatgtttaggcactcaaaa 227942  T

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