View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4765-Insertion-4 (Length: 462)

Name: NF4765-Insertion-4
Description: NF4765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4765-Insertion-4
NF4765-Insertion-4
[»] chr8 (57 HSPs)
chr8 (230-439)||(20091656-20091866)
chr8 (230-439)||(34665382-34665591)
chr8 (230-441)||(24844716-24844925)
chr8 (254-442)||(42754921-42755110)
chr8 (254-441)||(40780008-40780196)
chr8 (254-439)||(32393858-32394043)
chr8 (254-441)||(17841729-17841917)
chr8 (254-445)||(37985935-37986126)
chr8 (254-442)||(26041992-26042184)
chr8 (254-441)||(1645843-1646032)
chr8 (254-443)||(15187556-15187746)
chr8 (230-439)||(35353041-35353251)
chr8 (254-438)||(14128865-14129045)
chr8 (254-441)||(6108112-6108300)
chr8 (254-441)||(32064743-32064932)
chr8 (275-440)||(41819679-41819844)
chr8 (275-439)||(24211454-24211618)
chr8 (255-441)||(39772682-39772868)
chr8 (254-411)||(3596920-3597078)
chr8 (254-436)||(8453837-8454019)
chr8 (254-430)||(25581118-25581295)
chr8 (277-444)||(7017768-7017935)
chr8 (318-441)||(31347726-31347849)
chr8 (284-438)||(27782027-27782181)
chr8 (230-439)||(27835308-27835518)
chr8 (230-411)||(3890470-3890653)
chr8 (275-429)||(7021988-7022142)
chr8 (317-439)||(30834990-30835111)
chr8 (319-411)||(15972822-15972914)
chr8 (362-435)||(30834854-30834927)
chr8 (230-341)||(30055615-30055726)
chr8 (362-427)||(37132487-37132552)
chr8 (376-427)||(1886621-1886672)
chr8 (360-427)||(3890421-3890488)
chr8 (363-430)||(38016980-38017047)
chr8 (275-392)||(10044390-10044507)
chr8 (360-427)||(30055708-30055774)
chr8 (373-439)||(37132657-37132723)
chr8 (358-411)||(3817914-3817967)
chr8 (362-427)||(20091608-20091672)
chr8 (362-427)||(34665575-34665639)
chr8 (362-411)||(41819590-41819639)
chr8 (230-343)||(37132536-37132645)
chr8 (360-427)||(24844667-24844734)
chr8 (362-427)||(6108040-6108104)
chr8 (362-427)||(10044542-10044606)
chr8 (362-427)||(31347583-31347647)
chr8 (362-427)||(37985863-37985927)
chr8 (254-326)||(38017047-38017118)
chr8 (375-427)||(38017140-38017191)
chr8 (362-427)||(1503650-1503714)
chr8 (362-427)||(14129053-14129117)
chr8 (362-427)||(17841657-17841721)
chr8 (362-427)||(25581046-25581110)
chr8 (362-427)||(26041920-26041984)
chr8 (362-427)||(40779936-40780000)
chr8 (372-428)||(35353245-35353300)
[»] chr6 (28 HSPs)
chr6 (250-436)||(8515602-8515787)
chr6 (230-441)||(28675146-28675358)
chr6 (254-440)||(33695205-33695393)
chr6 (254-440)||(33696695-33696883)
chr6 (254-446)||(18365453-18365645)
chr6 (254-446)||(18370717-18370909)
chr6 (254-439)||(17175900-17176086)
chr6 (254-439)||(17705347-17705530)
chr6 (254-441)||(9752125-9752311)
chr6 (230-442)||(2309278-2309491)
chr6 (254-449)||(6127265-6127463)
chr6 (254-441)||(23290960-23291151)
chr6 (254-439)||(25986930-25987116)
chr6 (275-439)||(6031642-6031806)
chr6 (254-428)||(32702216-32702391)
chr6 (318-430)||(11548532-11548644)
chr6 (360-440)||(18889683-18889762)
chr6 (362-427)||(28675342-28675406)
chr6 (362-427)||(29693639-29693704)
chr6 (254-328)||(18889523-18889597)
chr6 (362-427)||(17705276-17705339)
chr6 (276-335)||(29693542-29693601)
chr6 (372-427)||(34238894-34238948)
chr6 (362-448)||(11548375-11548460)
chr6 (362-416)||(2309241-2309294)
chr6 (373-411)||(29693478-29693516)
chr6 (362-427)||(17175828-17175892)
chr6 (362-427)||(32702399-32702463)
[»] chr7 (32 HSPs)
chr7 (254-442)||(45637709-45637897)
chr7 (254-439)||(48880806-48880992)
chr7 (250-439)||(42611811-42612001)
chr7 (254-439)||(3961979-3962164)
chr7 (230-439)||(4974590-4974800)
chr7 (254-439)||(20009978-20010162)
chr7 (254-439)||(24394972-24395157)
chr7 (230-442)||(42696080-42696293)
chr7 (254-436)||(36790345-36790528)
chr7 (254-441)||(15329271-15329460)
chr7 (230-439)||(34482835-34483048)
chr7 (230-435)||(29737143-29737354)
chr7 (275-449)||(15577751-15577925)
chr7 (283-440)||(35444557-35444714)
chr7 (275-443)||(37476981-37477149)
chr7 (275-440)||(18036977-18037142)
chr7 (264-439)||(25167739-25167915)
chr7 (275-439)||(15238382-15238546)
chr7 (230-411)||(30848597-30848779)
chr7 (360-435)||(20009897-20009972)
chr7 (319-413)||(40880737-40880831)
chr7 (362-427)||(29737338-29737403)
chr7 (362-427)||(4974542-4974606)
chr7 (362-427)||(34483032-34483096)
chr7 (362-427)||(48880734-48880798)
chr7 (362-427)||(24395165-24395229)
chr7 (362-427)||(25167663-25167727)
chr7 (362-427)||(35445591-35445655)
chr7 (374-427)||(36790283-36790336)
chr7 (362-427)||(37476887-37476951)
chr7 (362-427)||(42696277-42696342)
chr7 (362-427)||(45637905-45637969)
[»] chr5 (32 HSPs)
chr5 (230-442)||(14138665-14138877)
chr5 (248-439)||(11361004-11361196)
chr5 (11-115)||(31640501-31640605)
chr5 (243-411)||(31640809-31640977)
chr5 (250-441)||(2477634-2477826)
chr5 (254-442)||(6043391-6043579)
chr5 (254-441)||(8145373-8145559)
chr5 (254-448)||(25398229-25398424)
chr5 (254-445)||(33584208-33584400)
chr5 (254-440)||(38899605-38899792)
chr5 (250-444)||(4433883-4434077)
chr5 (254-440)||(3362777-3362965)
chr5 (254-441)||(4892200-4892388)
chr5 (254-439)||(12850801-12850988)
chr5 (267-439)||(22912947-22913119)
chr5 (317-439)||(12614676-12614798)
chr5 (254-439)||(37321672-37321859)
chr5 (114-226)||(31640632-31640739)
chr5 (248-435)||(27481830-27482014)
chr5 (254-439)||(3521886-3522071)
chr5 (275-439)||(17545586-17545750)
chr5 (413-459)||(31640964-31641010)
chr5 (362-427)||(22912864-22912928)
chr5 (361-422)||(27482016-27482077)
chr5 (372-427)||(10458409-10458464)
chr5 (362-427)||(8145567-8145631)
chr5 (402-440)||(13664641-13664679)
chr5 (362-427)||(4892396-4892460)
chr5 (362-427)||(12614544-12614609)
chr5 (362-427)||(14138861-14138925)
chr5 (374-411)||(31640763-31640800)
chr5 (362-427)||(33584136-33584200)
[»] chr2 (32 HSPs)
chr2 (250-439)||(9723405-9723596)
chr2 (230-441)||(9293430-9293643)
chr2 (248-441)||(31174708-31174901)
chr2 (254-447)||(7475387-7475581)
chr2 (230-440)||(14941219-14941432)
chr2 (254-438)||(10661888-10662074)
chr2 (254-442)||(23267941-23268130)
chr2 (254-440)||(35160756-35160945)
chr2 (254-439)||(21936081-21936268)
chr2 (279-441)||(27847630-27847792)
chr2 (254-439)||(33380207-33380393)
chr2 (254-441)||(13354844-13355034)
chr2 (275-442)||(43330909-43331076)
chr2 (254-411)||(3989104-3989262)
chr2 (275-437)||(21393589-21393751)
chr2 (290-427)||(22591494-22591631)
chr2 (252-367)||(40262613-40262729)
chr2 (275-382)||(16767373-16767480)
chr2 (361-427)||(22592905-22592971)
chr2 (362-427)||(9293382-9293446)
chr2 (362-427)||(9723600-9723665)
chr2 (362-410)||(16767285-16767333)
chr2 (323-407)||(37335745-37335829)
chr2 (362-427)||(10662082-10662146)
chr2 (376-427)||(31174642-31174692)
chr2 (362-416)||(37335838-37335892)
chr2 (402-436)||(40262714-40262748)
chr2 (362-427)||(7475315-7475379)
chr2 (362-427)||(21393493-21393556)
chr2 (362-427)||(33380401-33380465)
chr2 (362-427)||(35160953-35161017)
chr2 (362-427)||(43331106-43331170)
[»] chr4 (44 HSPs)
chr4 (254-439)||(49387766-49387953)
chr4 (230-438)||(7744967-7745176)
chr4 (248-440)||(31078692-31078885)
chr4 (230-441)||(21802175-21802389)
chr4 (254-441)||(24128237-24128425)
chr4 (275-446)||(10442690-10442861)
chr4 (254-447)||(36073342-36073535)
chr4 (254-441)||(44893424-44893612)
chr4 (254-441)||(47290064-47290252)
chr4 (254-444)||(46441839-46442030)
chr4 (254-439)||(22199261-22199445)
chr4 (248-441)||(23964337-23964532)
chr4 (254-441)||(50156457-50156645)
chr4 (254-440)||(44893092-44893280)
chr4 (254-439)||(36072947-36073137)
chr4 (254-440)||(4751445-4751633)
chr4 (275-440)||(33530590-33530754)
chr4 (254-440)||(53123029-53123217)
chr4 (230-440)||(37934797-37935007)
chr4 (254-439)||(2624837-2625023)
chr4 (254-430)||(42671678-42671854)
chr4 (254-411)||(9088898-9089056)
chr4 (275-441)||(24392665-24392831)
chr4 (254-426)||(36073620-36073795)
chr4 (254-399)||(17655470-17655616)
chr4 (250-411)||(30563237-30563399)
chr4 (230-380)||(37219684-37219841)
chr4 (250-422)||(44744452-44744622)
chr4 (362-427)||(42671862-42671927)
chr4 (363-427)||(11314058-11314122)
chr4 (365-427)||(25063381-25063443)
chr4 (362-427)||(21802127-21802191)
chr4 (362-411)||(30563403-30563452)
chr4 (362-427)||(37219825-37219890)
chr4 (324-395)||(11314184-11314255)
chr4 (362-427)||(10442594-10442658)
chr4 (362-427)||(17655624-17655689)
chr4 (362-427)||(50156386-50156449)
chr4 (275-367)||(9111337-9111429)
chr4 (362-416)||(36073279-36073333)
chr4 (362-416)||(37934759-37934813)
chr4 (362-427)||(7744919-7744983)
chr4 (362-427)||(36073543-36073607)
chr4 (362-427)||(46442038-46442102)
[»] chr3 (55 HSPs)
chr3 (254-440)||(42297352-42297537)
chr3 (230-443)||(24343543-24343759)
chr3 (283-439)||(6041884-6042040)
chr3 (230-450)||(33113782-33114004)
chr3 (230-441)||(2754715-2754929)
chr3 (254-442)||(3574405-3574595)
chr3 (230-439)||(33145713-33145922)
chr3 (254-439)||(37216932-37217118)
chr3 (254-440)||(22426224-22426410)
chr3 (254-441)||(3137293-3137481)
chr3 (230-441)||(33839529-33839745)
chr3 (254-439)||(3456064-3456250)
chr3 (254-441)||(37522051-37522239)
chr3 (275-439)||(48160905-48161069)
chr3 (254-439)||(19650779-19650965)
chr3 (277-439)||(30385011-30385173)
chr3 (275-438)||(9796930-9797093)
chr3 (269-427)||(47738117-47738275)
chr3 (248-441)||(11347266-11347461)
chr3 (290-441)||(34482826-34482977)
chr3 (254-383)||(42297920-42298048)
chr3 (254-439)||(8320461-8320649)
chr3 (250-411)||(41883097-41883260)
chr3 (275-439)||(8361946-8362110)
chr3 (230-440)||(36864888-36865093)
chr3 (276-367)||(40327897-40327988)
chr3 (254-396)||(3089460-3089605)
chr3 (308-428)||(42921154-42921274)
chr3 (362-427)||(40328025-40328090)
chr3 (318-439)||(41224233-41224354)
chr3 (362-430)||(33839729-33839797)
chr3 (362-427)||(36864839-36864904)
chr3 (362-427)||(33145906-33145970)
chr3 (362-427)||(47738305-47738370)
chr3 (334-440)||(26612784-26612890)
chr3 (362-427)||(8361846-8361910)
chr3 (362-427)||(9796836-9796900)
chr3 (362-427)||(22426152-22426216)
chr3 (362-427)||(24343743-24343808)
chr3 (372-427)||(46919098-46919153)
chr3 (321-407)||(46918934-46919020)
chr3 (362-427)||(26612940-26613005)
chr3 (362-427)||(30385594-30385658)
chr3 (362-427)||(33113988-33114052)
chr3 (230-297)||(26612891-26612956)
chr3 (254-306)||(30385534-30385586)
chr3 (373-427)||(3456269-3456322)
chr3 (402-436)||(40327878-40327912)
chr3 (408-442)||(47402630-47402664)
chr3 (362-427)||(3137221-3137285)
chr3 (362-427)||(8320389-8320453)
chr3 (362-427)||(34482695-34482759)
chr3 (362-427)||(37216860-37216924)
chr3 (362-427)||(41224428-41224492)
chr3 (231-286)||(42921278-42921334)
[»] scaffold0096 (1 HSPs)
scaffold0096 (254-441)||(41009-41196)
[»] chr1 (40 HSPs)
chr1 (229-441)||(27523110-27523324)
chr1 (254-439)||(44094698-44094883)
chr1 (230-441)||(25463674-25463886)
chr1 (254-439)||(40214988-40215174)
chr1 (254-445)||(19015398-19015590)
chr1 (254-439)||(37821713-37821899)
chr1 (254-448)||(6883478-6883673)
chr1 (230-442)||(25973411-25973617)
chr1 (254-440)||(41876321-41876508)
chr1 (254-439)||(36966587-36966773)
chr1 (254-441)||(3559615-3559803)
chr1 (275-439)||(32000168-32000332)
chr1 (275-441)||(18404440-18404606)
chr1 (277-439)||(44690932-44691094)
chr1 (251-439)||(9910167-9910358)
chr1 (278-441)||(40273700-40273863)
chr1 (254-383)||(51737561-51737691)
chr1 (322-441)||(16045746-16045865)
chr1 (275-427)||(33786536-33786687)
chr1 (323-440)||(34519757-34519874)
chr1 (250-411)||(10167428-10167589)
chr1 (363-427)||(44690828-44690892)
chr1 (275-366)||(20305032-20305123)
chr1 (235-367)||(51621002-51621134)
chr1 (366-427)||(52064384-52064445)
chr1 (230-325)||(22157393-22157489)
chr1 (362-427)||(19722906-19722970)
chr1 (362-427)||(32000073-32000137)
chr1 (362-427)||(33786438-33786502)
chr1 (391-435)||(27523054-27523098)
chr1 (362-427)||(20304937-20305001)
chr1 (362-427)||(37821641-37821705)
chr1 (362-427)||(40215182-40215246)
chr1 (362-427)||(40273902-40273966)
chr1 (372-427)||(25973611-25973665)
chr1 (400-439)||(52329319-52329358)
chr1 (402-440)||(51620979-51621017)
chr1 (362-427)||(9910098-9910162)
chr1 (362-427)||(19015598-19015662)
chr1 (362-427)||(51737699-51737763)
[»] scaffold0178 (1 HSPs)
scaffold0178 (254-439)||(11621-11807)
[»] scaffold0085 (1 HSPs)
scaffold0085 (254-439)||(47850-48035)
[»] scaffold0471 (1 HSPs)
scaffold0471 (254-441)||(12840-13028)
[»] scaffold0204 (1 HSPs)
scaffold0204 (254-441)||(4394-4582)
[»] scaffold0665 (1 HSPs)
scaffold0665 (254-438)||(3069-3249)
[»] scaffold0228 (4 HSPs)
scaffold0228 (254-428)||(8413-8588)
scaffold0228 (254-428)||(15995-16170)
scaffold0228 (254-428)||(25947-26122)
scaffold0228 (362-427)||(26130-26194)
[»] scaffold0041 (1 HSPs)
scaffold0041 (319-413)||(85452-85546)


Alignment Details
Target: chr8 (Bit Score: 119; Significance: 1e-60; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 230 - 439
Target Start/End: Original strand, 20091656 - 20091866
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttatt 328  Q
    |||||||||||| |||  | ||| |||||||||||||||||||| |||| |||||||||| ||||||||| ||||||| ||| |||| ||||||||||||    
T  20091656 taatcacccttagatttcagtctcatttattaacctttcataaaaaaaaaatacataacacccaccaccccatgatttccggctaggctgagattttatt 20091755  T
Q  329 agctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatata 428  Q
     ||||||||||||||  ||||||||||||||||||||||||| |||||||||||| || ||||||||||||  |||||||||||||| ||||||||||||    
T  20091756 ggctaacattaatttcaggacgatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatata 20091855  T
Q  429 tatcattgctc 439  Q
    || ||||||||    
T  20091856 tagcattgctc 20091866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 230 - 439
Target Start/End: Complemental strand, 34665591 - 34665382
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttatta 329  Q
    |||||||||||| |||  | ||| |||||||||||||||||||| |||||||||||||| ||||||| | |||||||||||  | | ||||||||||||     
T  34665591 taatcacccttagatttcagtctcatttattaacctttcataaaaaaaaatacataacacccaccactccatgattttcggccaagctgagattttattg 34665492  T
Q  330 gctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatat 429  Q
    ||||||||||||||  |||| |||||||||||||||||||| |||||||||||| || ||||||||||||  ||||||||||||||||||||||||||||    
T  34665491 gctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatat 34665392  T
Q  430 atcattgctc 439  Q
    | ||||||||    
T  34665391 agcattgctc 34665382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 230 - 441
Target Start/End: Original strand, 24844716 - 24844925
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttatta 329  Q
    ||||||| |||| |||  ||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||| |  | ||| ||||||||||||     
T  24844716 taatcactcttagattttaatcttaattattaacctttcataaa-aaaaatacataacacccaccaccctatgatttccaatcaggatgagattttattg 24844814  T
Q  330 gctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatat 429  Q
    |||||||||||||| ||||| |||||||||||||||||||| ||||||||| ||||| ||||||||||||| |||||| ||||||| ||||||||||| |    
T  24844815 gctaacattaatttcgggacaatttcttgataaaatctaagggtgattatt-tgtcatgtcattcttgaatttttcttaataaaatatttcttgatatgt 24844913  T
Q  430 atcattgctctt 441  Q
    | |||| |||||    
T  24844914 agcatttctctt 24844925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 254 - 442
Target Start/End: Original strand, 42754921 - 42755110
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||||| |||||| || |||||||||||  ||| |||||||||||| | ||||||||||||   ||| ||    
T  42754921 atttattaatctttcataaaaaaaaaatacataacacccaccatcccatgattttcggccaggctgagattttattggttaacattaatttcatgactat 42755020  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctta 442  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  42755021 ttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatatcattgctctta 42755110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 254 - 441
Target Start/End: Original strand, 40780008 - 40780196
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||||||||||||||| ||||||| |||  ||| |||||||||||| | ||||||||||||  |||| ||    
T  40780008 atttattaatctttcataaaaaaaagatacataacatccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactat 40780107  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||  |||||||| |||||||||||||||||||| ||||||||||    
T  40780108 ttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 40780196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 254 - 439
Target Start/End: Complemental strand, 32394043 - 32393858
Alignment:
Q  254 atttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatt 353  Q
    ||||||||| |||||||||| |||||||||||||| | ||||||| ||||||||||| |||  |||||||||||| ||||||||||||||   ||| |||    
T  32394043 atttattaatctttcataaaaaaaaatacataacacctaccaccccatgattttcggctagactgagattttattggctaacattaatttcaagactatt 32393944  T
Q  354 tcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    |||||||||||| |||| |||||||||||| || ||||||||| ||  ||||||||||||||||||||||||||||| ||||||||    
T  32393943 tcttgataaaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 32393858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 254 - 441
Target Start/End: Original strand, 17841729 - 17841917
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||||| ||||||||| ||||||| |||  ||| |||||||||||| | ||||||||||||  |||| ||    
T  17841729 atttattaatctttcataaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactat 17841828  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||  |||||||| |||||||||||||||||||| ||||||||||    
T  17841829 ttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 17841917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 254 - 445
Target Start/End: Original strand, 37985935 - 37986126
Alignment:
Q  254 atttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatt 353  Q
    ||||||||| |||||||||| |||||||||||||| ||||||||| ||||||| |||  ||  |||||||||||| |||| |||||||||  |||| |||    
T  37985935 atttattaatctttcataaaaaaaaatacataacacccaccaccccatgatttccggccagactgagattttattggctagcattaatttcaggactatt 37986034  T
Q  354 tcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctcttaata 445  Q
    ||||||||||||||||| |||||||||||| || ||||||||| ||  ||| ||||||||||||||||||||||||| |||| |||||||||    
T  37986035 tcttgataaaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcattactcttaata 37986126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 254 - 442
Target Start/End: Original strand, 26041992 - 26042184
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||||| ||||||||| ||||||| |||| ||| |||||||||||| | ||||||||||||  |||| ||    
T  26041992 atttattaatctttcataaaaaaaagatacataacacccaccaccccatgatttccggtcaggctgagattttattggttaacattaatttcaggactat 26042091  T
Q  353 ttcttgataaaa---tctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctta 442  Q
    ||||||||||||   |||||| ||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||||||| |||||||||||    
T  26042092 ttcttgataaaaaaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatatatagcattgctctta 26042184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 254 - 441
Target Start/End: Original strand, 1645843 - 1646032
Alignment:
Q  254 atttattaacctttcataaacaaaa--atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacga 351  Q
    ||||||||| |||||||||| ||||  |||||||||| ||||||||| ||||||| ||   ||| |||||||||||||||||||||||||||   ||| |    
T  1645843 atttattaatctttcataaaaaaaaaaatacataacacccaccaccccatgatttccgaccaggctgagattttattagctaacattaatttcaagacta 1645942  T
Q  352 tttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    ||||||||||||||||||| |||||||||||| || ||| ||||| ||  ||||||||||||||||||||||||||||| ||||||||||    
T  1645943 tttcttgataaaatctaagggtgattattctgccatgtctttcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 1646032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 254 - 443
Target Start/End: Complemental strand, 15187746 - 15187556
Alignment:
Q  254 atttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggtt-gagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||||||||||||| ||||||| | ||||||| |||  ||| | ||||||||||| ||||||||||||||   ||| ||    
T  15187746 atttattaatctttcataaaaaaaaatacataacacccaccactccatgatttccggccaggctagagattttattggctaacattaatttcaagactat 15187647  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctcttaa 443  Q
    |||||||||||||||||| || ||||||||| ||  |||||||||||  ||||||||||||||||||||||||||||| ||||||||||||    
T  15187646 ttcttgataaaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcattgctcttaa 15187556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 230 - 439
Target Start/End: Complemental strand, 35353251 - 35353041
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttatt 328  Q
    |||||||| |||||||  ||||| ||||||||| |||||||||| |||| |||||||||| ||||||||  ||||||| |||  ||| ||||||||||||    
T  35353251 taatcacctttaaattttaatctcatttattaatctttcataaaaaaaagatacataacacccaccacctcatgatttccggccaggctgagattttatt 35353152  T
Q  329 agctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatata 428  Q
     | ||||||||||||   ||  |||||||||||||||||||| |||||||||||| || ||||||||| ||  |||||||| ||||||||||||||||||    
T  35353151 ggttaacattaatttcatgattatttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatata 35353052  T
Q  429 tatcattgctc 439  Q
    || ||||||||    
T  35353051 tagcattgctc 35353041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 254 - 438
Target Start/End: Complemental strand, 14129045 - 14128865
Alignment:
Q  254 atttattaacctttcataaacaaaaa-tacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| ||||| ||||||||| ||||||||||||||||||||| |     ||||||||||| ||||||||||||||   ||| ||    
T  14129045 atttattaatctttcataaaaaaaaaatacataacacccaccaccctatgattttcggct-----gagattttattggctaacattaatttcaagactat 14128951  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgct 438  Q
    |||||||||||||||||| |||||||||||| || ||||||||| ||  ||| ||||||||||||||||||||||||| |||||||    
T  14128950 ttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcattgct 14128865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 254 - 441
Target Start/End: Original strand, 6108112 - 6108300
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| | || |||||||||| ||||||||| ||||||| |||  ||| |||||||||||| | ||||||||||||  |||| ||    
T  6108112 atttattaatctttcataaaaagaagatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactat 6108211  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    |||||||||||||||||| |||||||||||| || ||||||||| ||  |||||| | |||||||||||||||||||| ||||||||||    
T  6108212 ttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatatataacattgctctt 6108300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 254 - 441
Target Start/End: Complemental strand, 32064932 - 32064743
Alignment:
Q  254 atttattaacctttcataaacaaaaa--tacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacga 351  Q
    ||||||||| |||||||||| |||||  ||||||||| ||| || || ||||||| |||  ||| |||||||||||| | ||||||||||||  | |  |    
T  32064932 atttattaatctttcataaaaaaaaagatacataacacccatcagcccatgatttccggccaggctgagattttattggttaacattaatttcagaatta 32064833  T
Q  352 tttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    ||||||||||||||||||| |||||||||||| || ||||||||||||  ||||||||||||||||||||||||||||| ||||||||||    
T  32064832 tttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctt 32064743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 275 - 440
Target Start/End: Original strand, 41819679 - 41819844
Alignment:
Q  275 aaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtg 374  Q
    ||||||||||||||  |||||||| ||||||| |||   || |||||||||||| ||||||||||||||  |||| |||||||||||||||||||| |||    
T  41819679 aaaaatacataacacacaccaccccatgatttccggccgggctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtg 41819778  T
Q  375 attattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctct 440  Q
    ||||||||| ||  |||||||| || | |||||||||||||||||||||||||||| |||||||||    
T  41819779 attattctgccatatcattcttaaaacattcttgataaaatctttcttgatatataacattgctct 41819844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 275 - 439
Target Start/End: Original strand, 24211454 - 24211618
Alignment:
Q  275 aaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtg 374  Q
    |||||||||||||| ||||||||| ||||||| |||  ||| |||||||||||| | ||||||||||||   ||| ||||||||||||||| |||| |||    
T  24211454 aaaaatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaagactatttcttgataaaatttaagggtg 24211553  T
Q  375 attattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    ||||||||| || | ||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  24211554 attattctgccatgccattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 24211618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 255 - 441
Target Start/End: Original strand, 39772682 - 39772868
Alignment:
Q  255 tttattaacctttcataaacaaaaa-tacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatt 353  Q
    |||||||| |||||||||| ||||| ||||||||| |||||| || ||||||| ||| | || |||||||||||| ||||||||||||||   ||| |||    
T  39772682 tttattaatctttcataaaaaaaaaatacataacacccaccatcccatgatttccggct-ggctgagattttattggctaacattaatttcaagactatt 39772780  T
Q  354 tcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    | ||||||||||||||| |||||||||||| || ||||||||||||  ||| |||||||||| |||||||||||||| ||||||||||    
T  39772781 ttttgataaaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatatttcttgatatataacattgctctt 39772868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 254 - 411
Target Start/End: Original strand, 3596920 - 3597078
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||||| ||||||||| ||||||| |||| ||| |||||||||||| | ||||||||||||  |||| ||    
T  3596920 atttattaatctttcataaaaaaaagatacataacacccaccaccccatgatttccggtcaggctgagattttattggttaacattaatttcaggactat 3597019  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgata 411  Q
    |||||||||||||||||| || ||||||||| || |||||||||||| |||||||||||    
T  3597020 ttcttgataaaatctaagggtaattattctgccatgtcattcttgaaactttcttgata 3597078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 254 - 436
Target Start/End: Complemental strand, 8454019 - 8453837
Alignment:
Q  254 atttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatt 353  Q
    ||||||||| |||||||||| ||| |||||||||| ||||||| | || |||| |||  ||| ||||||||||||   | ||||||||||  |||| |||    
T  8454019 atttattaatctttcataaaaaaagatacataacacccaccacaccataatttccggccaggctgagattttattgtgttacattaatttcaggactatt 8453920  T
Q  354 tcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattg 436  Q
    ||||||||||||||||| ||||||||| ||||| ||||||||||||  |||||||| |||||||||||||||||||| |||||    
T  8453919 tcttgataaaatctaagggtgattattttgtcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattg 8453837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 254 - 430
Target Start/End: Original strand, 25581118 - 25581295
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||||| ||||||||| ||||||| |||| ||| |||||||||||| | ||||||||||||  |||| ||    
T  25581118 atttattaatctttcataaaaaaaagatacataacacccaccaccccatgatttccggtcaggctgagattttattggttaacattaatttcaggactat 25581217  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatata 430  Q
    |||||||||||||||||  ||||||||| || || ||||||||||||  ||||||  ||||| |||||||||||||||    
T  25581218 ttcttgataaaatctaaaggtgattattttgccatgtcattcttgaaattttcttcgtaaaaactttcttgatatata 25581295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 277 - 444
Target Start/End: Original strand, 7017768 - 7017935
Alignment:
Q  277 aaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtgat 376  Q
    |||||||||||| ||||||||| ||||||| |||   |   ||||||||||| ||||||||||||||| | || ||||||||||||||||||||  ||||    
T  7017768 aaatacataacacccaccaccccatgatttccggcccgacagagattttattggctaacattaattttagtacaatttcttgataaaatctaaggatgat 7017867  T
Q  377 tattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctcttaat 444  Q
    ||||||| || ||||||||||||| |||||| | |||||||||| ||||||||| |||||||||||||    
T  7017868 tattctgccatgtcattcttgaatttttcttaagaaaatctttcatgatatatagcattgctcttaat 7017935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 318 - 441
Target Start/End: Original strand, 31347726 - 31347849
Alignment:
Q  318 gagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatct 417  Q
    ||||||||||| ||||||||||||||  |||| |||||||||||||||||||| |||||||||||| || ||||||||||||| |||||||| ||||| |    
T  31347726 gagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatat 31347825  T
Q  418 ttcttgatatatatcattgctctt 441  Q
    ||||||||||||| ||||||||||    
T  31347826 ttcttgatatatagcattgctctt 31347849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 284 - 438
Target Start/End: Original strand, 27782027 - 27782181
Alignment:
Q  284 taacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctg 383  Q
    ||||| ||||||||| ||||||| |||  ||  | |||||||||| ||||||||||||||   ||| |||||||||||||||||||| ||||||||||||    
T  27782027 taacacccaccacccaatgatttccggccagactaagattttattggctaacattaatttcaagacaatttcttgataaaatctaagggtgattattctg 27782126  T
Q  384 tcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgct 438  Q
     || |||||| ||||||||||||||||||||| |||||||||||||| |||||||    
T  27782127 ccatgtcattattgaatctttcttgataaaatatttcttgatatatagcattgct 27782181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 230 - 439
Target Start/End: Original strand, 27835308 - 27835518
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaa-caaaaatacataacatccaccaccctatgattttcggttaggttgagattttatt 328  Q
    |||||| ||||| |||  ||||| |||||||||||||| ||||| ||||||||||||||| |||||| || ||||||| ||  |||| ||||||||||||    
T  27835308 taatcatccttagatttcaatctcatttattaaccttttataaaacaaaaatacataacacccaccatcccatgatttccgtctaggctgagattttatt 27835407  T
Q  329 agctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatata 428  Q
     ||||||||||||||   ||| |||| || ||||||||||||  |||||||| |  || ||||||||||||| |||||| |||| |||||| ||||||||    
T  27835408 ggctaacattaatttgaagacaattttttaataaaatctaaggatgattattttaccatgtcattcttgaatttttcttaataagatctttattgatata 27835507  T
Q  429 tatcattgctc 439  Q
    || ||||||||    
T  27835508 tagcattgctc 27835518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 230 - 411
Target Start/End: Original strand, 3890470 - 3890653
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctt----tcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagatttt 325  Q
    |||||||| ||| |||  |||||||||||||||||||    | ||||| |||||||||||||| ||||||||| ||||||||| |  | | |||||||||    
T  3890470 taatcaccattagattttaatcttatttattaaccttaattttataaa-aaaaatacataacacccaccaccccatgattttcagccatgatgagatttt 3890568  T
Q  326 attagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgata 411  Q
    ||| |||||||||||||| | ||| |||||||||||||||||||| |||||||||||| || ||||||||||||| ||||||||||    
T  3890569 attggctaacattaatttcgagacaatttcttgataaaatctaag-gtgattattctgccatgtcattcttgaatttttcttgata 3890653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 275 - 429
Target Start/End: Complemental strand, 7022142 - 7021988
Alignment:
Q  275 aaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtg 374  Q
    |||||||||||||| ||||||||| ||||||| |||   |    |||||||||| |||||||||||||| || || |||||||||||||||||||| |||    
T  7022142 aaaaatacataacacccaccaccccatgatttccggcccgacatagattttattggctaacattaatttcggtacaatttcttgataaaatctaagggtg 7022043  T
Q  375 attattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatat 429  Q
    ||||||||| ||  |||||||||||| |||||||| |||||||||||||||||||    
T  7022042 attattctgccatatcattcttgaatttttcttgagaaaatctttcttgatatat 7021988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 317 - 439
Target Start/End: Original strand, 30834990 - 30835111
Alignment:
Q  317 tgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatc 416  Q
    ||||||||||||  |||||||||||||  |||| |||||||||||||||| ||| |||||||||||| || ||||||||||||| ||| | |||||||||    
T  30834990 tgagattttattgactaacattaatttcaggacaatttcttgataaaatcaaagggtgattattctgccatgtcattcttgaat-tttttcgataaaatc 30835088  T
Q  417 tttcttgatatatatcattgctc 439  Q
    |||||||||||||| ||||||||    
T  30835089 tttcttgatatataacattgctc 30835111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 319 - 411
Target Start/End: Original strand, 15972822 - 15972914
Alignment:
Q  319 agattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgata 411  Q
    |||||||||| ||||||||||| ||  | || |||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  15972822 agattttattggctaacattaaattcagaacaatttcttgataaaatctaagggtgattattctgtcatgtcattcttcaatctttcttgata 15972914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 435
Target Start/End: Complemental strand, 30834927 - 30834854
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcatt 435  Q
    ||||||||| ||| ||||||||||| ||||||||| ||||||||||||||||||| |||||||||| |||||||    
T  30834927 aaatctaagggtggttattctgtcatgtcattctttaatctttcttgataaaatcattcttgatatctatcatt 30834854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 230 - 341
Target Start/End: Complemental strand, 30055726 - 30055615
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaacaaaaa-tacataacatccaccaccctatgattttcggttaggttgagattttatt 328  Q
    |||||||||||| |||  | ||| |||||||||||||||||||| ||||| ||||||||||||||||||| ||||||| |||  | | ||||||||||||    
T  30055726 taatcacccttagattttagtctcatttattaacctttcataaaaaaaaaatacataacatccaccaccccatgatttccggcca-gctgagattttatt 30055628  T
Q  329 agctaacattaat 341  Q
     ||||||||||||    
T  30055627 ggctaacattaat 30055615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 37132552 - 37132487
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||| ||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||||||    
T  37132552 aaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatat 37132487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 376 - 427
Target Start/End: Original strand, 1886621 - 1886672
Alignment:
Q  376 ttattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  1886621 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 1886672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 360 - 427
Target Start/End: Complemental strand, 3890488 - 3890421
Alignment:
Q  360 taaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||||  |||||||||||| ||  |||||||||||||||||||||||||||| ||||||||||    
T  3890488 taaaatctaatggtgattattctgccatatcattcttgaatctttcttgataaaatcattcttgatat 3890421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 363 - 430
Target Start/End: Complemental strand, 38017047 - 38016980
Alignment:
Q  363 aatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatata 430  Q
    |||| ||| |||||||||||| || ||||||||||||  |||||||||||||||||||||||||||||    
T  38017047 aatccaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatata 38016980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 275 - 392
Target Start/End: Complemental strand, 10044507 - 10044390
Alignment:
Q  275 aaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtg 374  Q
    |||||||||||||| ||||||| | ||||||| ||   || ||||||||||||| |||||||||||||     || ||||||||||||||| ||||  ||    
T  10044507 aaaaatacataacaaccaccactccatgatttccgaccagattgagattttattggctaacattaattccaaaactatttcttgataaaatttaaggatg 10044408  T
Q  375 attattctgtcacgtcat 392  Q
    |||||||||||| |||||    
T  10044407 attattctgtcatgtcat 10044390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 427
Target Start/End: Original strand, 30055708 - 30055774
Alignment:
Q  360 taaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||||| ||||||||| ||||| |||||||||||||||||||| |||||||| ||||| ||||    
T  30055708 taaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatat 30055774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 373 - 439
Target Start/End: Original strand, 37132657 - 37132723
Alignment:
Q  373 tgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    ||||||||||| || ||||||||| ||| |||||||||||||| ||| |||||||||| ||||||||    
T  37132657 tgattattctgccatgtcattcttaaatttttcttgataaaatattttttgatatatagcattgctc 37132723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 411
Target Start/End: Original strand, 3817914 - 3817967
Alignment:
Q  358 gataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgata 411  Q
    ||||||||||||| ||||||||||||||| || |||||||||| ||||||||||    
T  3817914 gataaaatctaagggtgattattctgtcatgtaattcttgaatttttcttgata 3817967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 20091672 - 20091608
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||| ||||||||| || || |||||||||||||||||||| |||||||| ||||||||||    
T  20091672 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 20091608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 34665575 - 34665639
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||| ||||||||| || || |||||||||||||||||||| |||||||| ||||||||||    
T  34665575 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 34665639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 411
Target Start/End: Complemental strand, 41819639 - 41819590
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgata 411  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||||||||||    
T  41819639 aaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgata 41819590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 343
Target Start/End: Original strand, 37132536 - 37132645
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttatta 329  Q
    |||||||||||| |||  | |||||||||||||||||||| ||| ||||| ||||||||    |||||| ||||||| |  | ||  ||||||||||||     
T  37132536 taatcacccttagatttcagtcttatttattaacctttcaaaaaaaaaaaaacataaca----ccaccccatgatttccaatcagactgagattttattg 37132631  T
Q  330 gctaacattaattt 343  Q
    ||||||||||||||    
T  37132632 gctaacattaattt 37132645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 427
Target Start/End: Complemental strand, 24844734 - 24844667
Alignment:
Q  360 taaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||||| ||||||||| || || | ||||||| ||||||||||||||||||| || |||||||    
T  24844734 taaaatctaagagtgattattttgccatgccattcttaaatctttcttgataaaatcattattgatat 24844667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 6108104 - 6108040
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| ||||| ||||||||||||| |||||| |||||||| ||||||||||    
T  6108104 aaatctaaaggtgattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatat 6108040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 10044542 - 10044606
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || |||||||||||||||||||| |||||||| ||||||||||    
T  10044542 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 10044606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 31347647 - 31347583
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || ||||||||||||||||||||||| ||||| ||||||||||    
T  31347647 aaatctaaaggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatat 31347583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 37985927 - 37985863
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || |||||||||||||||||||| |||||||| ||||||||||    
T  37985927 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 37985863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 326
Target Start/End: Complemental strand, 38017118 - 38017047
Alignment:
Q  254 atttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagatttta 326  Q
    ||||||||| |||||| ||| |||||||||||||| ||||||||| ||||||| |||  ||| ||||||||||    
T  38017118 atttattaatctttcaaaaa-aaaaatacataacacccaccaccccatgatttccggccaggctgagatttta 38017047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 427
Target Start/End: Original strand, 38017140 - 38017191
Alignment:
Q  375 attattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    |||||| ||||| |||||||||||||||||||| |||||||| ||||||||||    
T  38017140 attattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 38017191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 1503714 - 1503650
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || ||||||||||||| |||||| |||||||| ||||||||||    
T  1503714 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 1503650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 14129053 - 14129117
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || ||||||||||||| |||||| |||||||| ||||||||||    
T  14129053 aaatctaaaggtgattattgtgccatgtcattcttgaatatttctt-ataaaatcattcttgatat 14129117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 17841721 - 17841657
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || ||||||||||||| |||||| |||||||| ||||||||||    
T  17841721 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 17841657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 25581110 - 25581046
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| ||| | ||||||||||||| |||||| |||||||| ||||||||||    
T  25581110 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatat 25581046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 26041984 - 26041920
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || ||||||||||||| |||||| |||||||| ||||||||||    
T  26041984 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 26041920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 40780000 - 40779936
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || ||||||||||||| |||||| |||||||| ||||||||||    
T  40780000 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 40779936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 35353245 - 35353300
Alignment:
Q  372 gtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatata 428  Q
    ||||||||| || || ||||||||||||| |||||| |||||||| |||||||||||    
T  35353245 gtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatata 35353300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 115; Significance: 3e-58; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 250 - 436
Target Start/End: Original strand, 8515602 - 8515787
Alignment:
Q  250 tcttatttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggac 349  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||| || | ||| |||||||||||| |||||||||||||| |||||    
T  8515602 tcttatttattaacatttcataaaaaaaaatacataacatccaccaccccatgatttccgatcaggctgagattttattggctaacattaatttcgggac 8515701  T
Q  350 gatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattg 436  Q
     |||||||||||||||| || ||||||||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| |||||    
T  8515702 aatttcttgataaaatc-aaatgtgattattctgccatgtcattcttaaatctgtcttgataaaatctttcttgatatatagcattg 8515787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 230 - 441
Target Start/End: Complemental strand, 28675358 - 28675146
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaacaaaaa-tacataacatccaccaccctatgattttcggttaggttgagattttatt 328  Q
    |||||||||||| |||  | ||| |||||||||||||||||||| ||||| ||||||||  ||||||||| ||||||| |||  ||| ||||||||||||    
T  28675358 taatcacccttagatttcagtctcatttattaacctttcataaataaaaaatacataacccccaccaccccatgatttccggccaggctgagattttatt 28675259  T
Q  329 agctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatata 428  Q
    |||||||||||||||  |||| |||||||||||||||||||| |||||||||| | || ||||||||||||  |||||||||||||||||||||||||||    
T  28675258 agctaacattaatttcaggacaatttcttgataaaatctaagggtgattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatata 28675159  T
Q  429 tatcattgctctt 441  Q
    || ||||||||||    
T  28675158 tagcattgctctt 28675146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 254 - 440
Target Start/End: Original strand, 33695205 - 33695393
Alignment:
Q  254 atttattaacctttcataaacaaaaa--tacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacga 351  Q
    ||||||||| |||||||||| |||||  ||||||||| ||||||||| ||||||| |||  ||| |||||||||||| ||||||||||||||  |||| |    
T  33695205 atttattaatctttcataaaaaaaaaattacataacacccaccaccccatgatttccggccaggctgagattttattggctaacattaatttcaggacta 33695304  T
Q  352 tttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctct 440  Q
    ||||||||||||||||||| |||||||||||| || ||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  33695305 tttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 33695393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 254 - 440
Target Start/End: Complemental strand, 33696883 - 33696695
Alignment:
Q  254 atttattaacctttcataaacaaaaa--tacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacga 351  Q
    ||||||||| |||||||||| |||||  ||||||||| ||||||||| ||||||| |||  ||| |||||||||||| ||||||||||||||  |||| |    
T  33696883 atttattaatctttcataaaaaaaaaattacataacacccaccaccccatgatttccggccaggctgagattttattggctaacattaatttcaggacta 33696784  T
Q  352 tttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctct 440  Q
    ||||||||||||||||||| |||||||||||| || ||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  33696783 tttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 33696695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 254 - 446
Target Start/End: Original strand, 18365453 - 18365645
Alignment:
Q  254 atttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatt 353  Q
    ||||||||| |||||||||| |||||||||||||| |||| |||| ||||||| |||  ||| |||||||||||| ||||||||||||||   ||| |||    
T  18365453 atttattaatctttcataaaaaaaaatacataacacccactaccccatgatttccggccaggatgagattttattggctaacattaatttcaagactatt 18365552  T
Q  354 tcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctcttaataa 446  Q
    |||||||||||| |||| |||||||||||| || ||||||||||||  ||| ||||||||||||||||||||||||| |||||||||| ||||    
T  18365553 tcttgataaaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctctttataa 18365645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 254 - 446
Target Start/End: Original strand, 18370717 - 18370909
Alignment:
Q  254 atttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatt 353  Q
    ||||||||| |||||||||| |||||||||||||| |||| |||| ||||||| |||  ||| |||||||||||| ||||||||||||||   ||| |||    
T  18370717 atttattaatctttcataaaaaaaaatacataacacccactaccccatgatttccggccaggatgagattttattggctaacattaatttcaagactatt 18370816  T
Q  354 tcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctcttaataa 446  Q
    |||||||||||| |||| |||||||||||| || ||||||||||||  ||| ||||||||||||||||||||||||| |||||||||| ||||    
T  18370817 tcttgataaaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctctttataa 18370909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 254 - 439
Target Start/End: Original strand, 17175900 - 17176086
Alignment:
Q  254 atttattaacctttcataaacaaaaa-tacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| ||||| ||||||||| ||||||||| ||||||| |||  ||| |||||||||||| ||||||||||||||   ||  ||    
T  17175900 atttattaatctttcataaaaaaaaaatacataacacccaccaccccatgatttccggccaggctgagattttattggctaacattaatttcatgattat 17175999  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||  ||| ||||||||||||||||||||||||| ||||||||    
T  17176000 ttcttgataaaatctaagggtgattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatatatagcattgctc 17176086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 254 - 439
Target Start/End: Original strand, 17705347 - 17705530
Alignment:
Q  254 atttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatt 353  Q
    ||||||||||||||||||||  ||| ||||||||| |||||| || ||||||| |||  ||  |||||||||||| ||||||||||||||  |||| |||    
T  17705347 atttattaacctttcataaa--aaattacataacacccaccatcccatgatttccggccagactgagattttattggctaacattaatttcaggacaatt 17705444  T
Q  354 tcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    ||||||||||||||||| ||||||||||||||| ||||||||| ||  ||||||||||||||||||||||||||||| ||||||||    
T  17705445 tcttgataaaatctaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 17705530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 254 - 441
Target Start/End: Original strand, 9752125 - 9752311
Alignment:
Q  254 atttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatt 353  Q
    |||||||||||||||||||| |||||||||||||| ||| ||||| ||||||| |||  ||| |||||||||||| ||||||||||||||  |||| |||    
T  9752125 atttattaacctttcataaaaaaaaatacataacacccatcaccccatgatttccggccaggctgagattttattggctaacattaatttcaggacaatt 9752224  T
Q  354 tcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    |||| |||||||||||| |||||||||||| ||  |||||||||||| ||||||||| || | |||||||||||||| ||||||||||    
T  9752225 tcttaataaaatctaagggtgattattctgccatatcattcttgaatttttcttgat-aattttttcttgatatataacattgctctt 9752311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 230 - 442
Target Start/End: Original strand, 2309278 - 2309491
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttatt 328  Q
    |||||||||||| |||  | ||| |||||||||||||||||||| |||| |||||||||| |||| |||| ||||||| |||  | | ||||||||||||    
T  2309278 taatcacccttagatttcagtctcatttattaacctttcataaaaaaaaaatacataacacccacaaccccatgatttccggccaagctgagattttatt 2309377  T
Q  329 agctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatata 428  Q
     ||||||||||||||  |||| |||||||||||||||||||| |||||||||||| || | ||||||| ||    | |||||||||||||||||||||||    
T  2309378 ggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgccattcttaaaaaaattttgataaaatctttcttgatata 2309477  T
Q  429 tatcattgctctta 442  Q
    || |||||||||||    
T  2309478 taacattgctctta 2309491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 254 - 449
Target Start/End: Complemental strand, 6127463 - 6127265
Alignment:
Q  254 atttattaacctttcata--aacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgg-gacg 350  Q
    ||||||||| ||||||||  || |||||||||||||| ||||||||| |||||||  ||  |   ||| |||||||| |||||||||||||||   |||     
T  6127463 atttattaatctttcatataaaaaaaaatacataacacccaccaccccatgatttctggccaaactgatattttattggctaacattaattttcaagact 6127364  T
Q  351 atttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctcttaataaaat 449  Q
    |||||||||||||||||||| |||||||||||| || ||||||||| ||  ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6127363 atttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcttaataaaat 6127265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 254 - 441
Target Start/End: Original strand, 23290960 - 23291151
Alignment:
Q  254 atttattaacctttcataaacaaaa----atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggac 349  Q
    ||||||||| |||||||||| ||||    |||||||||| ||| ||||| |||||||  ||  ||| |||||||||||| | ||||||||||||  | ||    
T  23290960 atttattaatctttcataaaaaaaagaaaatacataacacccatcaccccatgatttctggccaggctgagattttattggttaacattaatttcagaac 23291059  T
Q  350 gatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
     |||||||||||||||||||| |||||||||||| || ||||||||| ||  ||||||||||||||||||||||||||||| ||||||||||    
T  23291060 tatttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 23291151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 254 - 439
Target Start/End: Complemental strand, 25987116 - 25986930
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||| ||| |||||||||| |||| |||||||||| ||||||||| ||||||| |||  ||  |||||||||||| | ||||||||||||  |||| ||    
T  25987116 atttactaatctttcataaaaaaaagatacataacacccaccaccccatgatttccggccagactgagattttattggttaacattaatttcaggactat 25987017  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    ||||||||||||| |||| ||||||||| || || ||||||||||||  |||||| |||||||||||||||||||||| ||||||||    
T  25987016 ttcttgataaaatttaagagtgattattttgccatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 25986930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 275 - 439
Target Start/End: Original strand, 6031642 - 6031806
Alignment:
Q  275 aaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtg 374  Q
    |||||||||||||| ||||||||| ||||||| |||  ||| || ||||||||| | ||||||||||||   ||| ||||||||||||||| |||| |||    
T  6031642 aaaaatacataacacccaccaccccatgatttccggccaggctgggattttattggttaacattaatttcaagactatttcttgataaaatttaagggtg 6031741  T
Q  375 attattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    |||||||||||| ||||||||| ||  ||| ||||| ||||||||||||||||||| ||||||||    
T  6031742 attattctgtcatgtcattcttaaaattttattgatgaaatctttcttgatatatagcattgctc 6031806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 254 - 428
Target Start/End: Complemental strand, 32702391 - 32702216
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||| | ||||||||| ||||||| ||| |||  | |||||||||| | ||| ||||||||  |||| ||    
T  32702391 atttattaatctttcataaaaaaaagatacataagacccaccaccccatgatttccggctagactcagattttattggttaatattaatttcaggactat 32702292  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatata 428  Q
    |||||||||||||||||| |||||||||||| ||  |||||||||||  |||| ||| ||||||||||||||||||    
T  32702291 ttcttgataaaatctaagggtgattattctgccatatcattcttgaaattttcatgaaaaaatctttcttgatata 32702216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 318 - 430
Target Start/End: Original strand, 11548532 - 11548644
Alignment:
Q  318 gagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatct 417  Q
    ||||||||||| |||||||||||| |  | || |||||||||||||||||||| |||||||||||| || ||||||||||||| |||||||| ||||| |    
T  11548532 gagattttattggctaacattaatatcagtacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaattt 11548631  T
Q  418 ttcttgatatata 430  Q
    |||||||||||||    
T  11548632 ttcttgatatata 11548644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 440
Target Start/End: Original strand, 18889683 - 18889762
Alignment:
Q  360 taaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctct 440  Q
    ||||||||||| || ||||||||| || ||||||||||||  ||||||||| ||||||||||||||||||| |||||||||    
T  18889683 taaaatctaagggttattattctgccatgtcattcttgaaattttcttgat-aaatctttcttgatatatagcattgctct 18889762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 28675342 - 28675406
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||    
T  28675342 aaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 28675406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 29693639 - 29693704
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||| || ||||||||| || ||||||||| ||||||||||||||||||| ||||||||||    
T  29693639 aaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatat 29693704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 328
Target Start/End: Original strand, 18889523 - 18889597
Alignment:
Q  254 atttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttatt 328  Q
    ||||||||| |||||||||| |||||||||||| | ||||||||| ||||||| |||  ||| ||||||||||||    
T  18889523 atttattaatctttcataaaaaaaaatacataaaacccaccaccccatgatttccggcaaggctgagattttatt 18889597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 17705339 - 17705276
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||    
T  17705339 aaatctaag-gtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 17705276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 276 - 335
Target Start/End: Complemental strand, 29693601 - 29693542
Alignment:
Q  276 aaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaac 335  Q
    ||||||||||||||||||||||| ||||||| |||  ||| |||||||||||| ||||||    
T  29693601 aaaatacataacatccaccaccccatgatttccggccaggctgagattttattggctaac 29693542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 427
Target Start/End: Complemental strand, 34238948 - 34238894
Alignment:
Q  372 gtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||| ||||| |||||||||||||| |||||||||||||| ||||||||||    
T  34238948 gtgattattgtgtcatgtcattcttgaatc-ttcttgataaaatcattcttgatat 34238894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 448
Target Start/End: Complemental strand, 11548460 - 11548375
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctcttaataaaa 448  Q
    ||||||||| ||||||||| || || |||||||||||||| |||||||| ||||| |||||||||| || ||||  |||||| ||||    
T  11548460 aaatctaagggtgattattgtgccatgtcattcttgaatcgttcttgat-aaatcattcttgatatctagcatttttcttaaaaaaa 11548375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 416
Target Start/End: Complemental strand, 2309294 - 2309241
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatc 416  Q
    ||||||||| ||||||||| || || |||||||||||||||||||| ||||||||    
T  2309294 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatc 2309241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 411
Target Start/End: Complemental strand, 29693516 - 29693478
Alignment:
Q  373 tgattattctgtcacgtcattcttgaatctttcttgata 411  Q
    |||||||||||||| ||||||||||||| ||||||||||    
T  29693516 tgattattctgtcatgtcattcttgaatatttcttgata 29693478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 17175892 - 17175828
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| |  || |||||||||||||||||||| |||||||| ||||||||||    
T  17175892 aaatctaaaggtgattattgtaccatgtcattcttgaatctttctt-ataaaatcattcttgatat 17175828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 32702399 - 32702463
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  || |||||| ||||| ||||||||||||| |||||| |||||||| ||||||||||    
T  32702399 aaatctaaaggtaattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatat 32702463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 113; Significance: 5e-57; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 254 - 442
Target Start/End: Complemental strand, 45637897 - 45637709
Alignment:
Q  254 atttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatt 353  Q
    ||||||||| |||||||||| |||||||||||||||||||||||| ||||||| |||  ||  |||||||||||| |||| |||||||||  |||| |||    
T  45637897 atttattaatctttcataaaaaaaaatacataacatccaccaccccatgatttccggccagactgagattttattggctagcattaatttcaggactatt 45637798  T
Q  354 tcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctta 442  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||  ||||||||||||||||||||||||||||| |||||||||||    
T  45637797 tcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctta 45637709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 254 - 439
Target Start/End: Original strand, 48880806 - 48880992
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||||| ||||||||| ||||||| |||  ||| |||||||||||| | ||||||||||||  |||| ||    
T  48880806 atttattaatctttcataaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactat 48880905  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  48880906 ttcttgataaaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 48880992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 250 - 439
Target Start/End: Complemental strand, 42612001 - 42611811
Alignment:
Q  250 tcttatttattaacctttcataaacaaaaa-tacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttggga 348  Q
    ||||||||||||| |||||||||| ||||| ||||||||| ||||||||| ||||||| |||| ||  ||| |||||||| ||||||||||||||   ||    
T  42612001 tcttatttattaatctttcataaaaaaaaaatacataacacccaccaccccatgatttccggtcagactgaaattttattggctaacattaatttcaaga 42611902  T
Q  349 cgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    | |||||||||||||||||||| |||||||||||| || ||||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  42611901 ctatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 42611811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 254 - 439
Target Start/End: Complemental strand, 3962164 - 3961979
Alignment:
Q  254 atttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatt 353  Q
    ||||||||| |||||||||| |||||||||||||| ||||||||| ||||||| |||  | | |||||||||||| ||||||||||||||   ||| |||    
T  3962164 atttattaatctttcataaaaaaaaatacataacacccaccaccccatgatttccggccaagctgagattttattggctaacattaatttcaagactatt 3962065  T
Q  354 tcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    |||||||||||| |||| ||||||||||||||| ||||||||| ||  ||||||||||||||||||||||||||||| ||||||||    
T  3962064 tcttgataaaatttaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 3961979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 230 - 439
Target Start/End: Original strand, 4974590 - 4974800
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaacaaaaa-tacataacatccaccaccctatgattttcggttaggttgagattttatt 328  Q
    |||||||||||| |||  | ||| |||||||||||||||||||| ||||| ||||||||| ||||||||  ||||||| |||  |   ||||||||||||    
T  4974590 taatcacccttagatttcagtctcatttattaacctttcataaaaaaaaaatacataacacccaccacctcatgatttccggccaaactgagattttatt 4974689  T
Q  329 agctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatata 428  Q
     ||||||||||||||  |||  |||||||||||||||||||| |||||||||||| || ||||||||||||  |||||||||||||||||||||||||||    
T  4974690 ggctaacattaatttcaggataatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 4974789  T
Q  429 tatcattgctc 439  Q
    || ||||||||    
T  4974790 tagcattgctc 4974800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 254 - 439
Target Start/End: Original strand, 20009978 - 20010162
Alignment:
Q  254 atttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatt 353  Q
    |||||||||||||| ||||  |||||||||||||| |||  |||| || |||| |||  |||||||||||||||| ||||||||||||||  |||| |||    
T  20009978 atttattaacctttaataagaaaaaatacataacacccataaccccataatttccggccaggttgagattttattggctaacattaatttcaggacaatt 20010077  T
Q  354 tcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    | ||||||||||||||| ||||||||||||| | ||||||||||||  ||| ||||||||||||||||||||||||| ||||||||    
T  20010078 ttttgataaaatctaagggtgattattctgt-atgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctc 20010162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 254 - 439
Target Start/End: Complemental strand, 24395157 - 24394972
Alignment:
Q  254 atttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatt 353  Q
    ||||||||| |||||||||| | |||||||||||| ||||||||| ||||||| |||  |||||||||||||||| ||||||||||||||  | || |||    
T  24395157 atttattaatctttcataaaaataaatacataacacccaccaccccatgatttccggccaggttgagattttattggctaacattaatttcagaactatt 24395058  T
Q  354 tcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    | ||||||||||||||  ||  |||||||| || ||||||||| ||  ||||||||||||||||||||||||||||| ||||||||    
T  24395057 ttttgataaaatctaaaggttgttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 24394972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 230 - 442
Target Start/End: Complemental strand, 42696293 - 42696080
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaacaaaaa-tacataacatccaccaccctatgattttcggttaggttgagattttatt 328  Q
    |||||||||||| |||  | ||| |||||||||| ||||||||| ||||| |||||||||||||||||||  |||||| |||  ||||||||||||||||    
T  42696293 taatcacccttagatttcagtctcatttattaacttttcataaaaaaaaaatacataacatccaccaccccttgatttccggccaggttgagattttatt 42696194  T
Q  329 agctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatata 428  Q
      |||||||||||||  |||| ||||||||||||||| |||| ||||||||||||  | ||||||||| ||   || || ||||||||||||||||||||    
T  42696193 gactaacattaatttcaggacaatttcttgataaaatataagggtgattattctgctatgtcattcttaaaaaatttttaataaaatctttcttgatata 42696094  T
Q  429 tatcattgctctta 442  Q
    || |||||||||||    
T  42696093 taacattgctctta 42696080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 254 - 436
Target Start/End: Original strand, 36790345 - 36790528
Alignment:
Q  254 atttattaacctttcataaa-caaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||| |  | |||||| |||  |||||||||||| ||||||||||||||  | || ||    
T  36790345 atttattaacctttcataaaacaaaaatacataacacccaccacccaaaaaatttcggctagactgagattttattggctaacattaatttcagaacaat 36790444  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattg 436  Q
    ||||||||||||| |||| || ||||||||| || ||||||||| ||| ||||||||||||| ||||||||||||||| |||||    
T  36790445 ttcttgataaaatttaagggtaattattctgccatgtcattcttaaatttttcttgataaaaactttcttgatatatagcattg 36790528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 254 - 441
Target Start/End: Complemental strand, 15329460 - 15329271
Alignment:
Q  254 atttattaacctttcataaacaa--aaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacga 351  Q
    ||||||||| |||||||||| ||  ||| | ||||||  |||||||| ||||||| |||  ||  ||||||||||||  |||||||||||||   ||| |    
T  15329460 atttattaatctttcataaaaaataaaaaaaataacactcaccaccccatgatttccggccagtctgagattttattgactaacattaatttcaagacta 15329361  T
Q  352 tttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||| ||||||||||    
T  15329360 tttcttgataaaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctt 15329271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 230 - 439
Target Start/End: Complemental strand, 34483048 - 34482835
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaaca-----aaaatacataacatccaccaccctatgattttcggttaggttgagattt 324  Q
    |||||||| ||| |||  ||||| ||||||||| |||||||||| |     ||||||||||||| ||||||||| ||||||| |||  ||  ||||||||    
T  34483048 taatcacctttagatttcaatctcatttattaatctttcataaaaataaaaaaaatacataacacccaccaccc-atgatttccggccagactgagattt 34482950  T
Q  325 tattagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttga 424  Q
    |||| ||||||||||||||  |||| |||||||||||||||||||| |||||||||||| || ||||||||| ||  |||||| ||||||||||||||||    
T  34482949 tattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttaataaaatctttcttga 34482850  T
Q  425 tatatatcattgctc 439  Q
    |||||| ||||||||    
T  34482849 tatatagcattgctc 34482835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 230 - 435
Target Start/End: Complemental strand, 29737354 - 29737143
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcata------aacaaaaatacataacatccaccaccctatgattttcggttaggttgagatt 323  Q
    |||||||||||| |||  | ||| ||||||||||||||||||      || |||||||||||||  |||| |||| ||||||| |||| |||||||||||    
T  29737354 taatcacccttagatttcagtctcatttattaacctttcatagaaagaaaaaaaaatacataactcccactaccccatgatttccggtcaggttgagatt 29737255  T
Q  324 ttattagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttg 423  Q
    ||||| |||||||||||||| ||||| ||||||| |||||||||||| |||||||||||  || ||||||||| ||  |||||| | |||||||||||||    
T  29737254 ttattggctaacattaatttcgggacaatttcttaataaaatctaagggtgattattctaccatgtcattcttaaaattttcttaaaaaaatctttcttg 29737155  T
Q  424 atatatatcatt 435  Q
    ||||||| ||||    
T  29737154 atatatagcatt 29737143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 275 - 449
Target Start/End: Original strand, 15577751 - 15577925
Alignment:
Q  275 aaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtg 374  Q
    |||||||||||||| |||||| || ||||||| |||  ||  ||||||| |||| ||||||||||||||   |||  |||||||||||| |||||| |||    
T  15577751 aaaaatacataacacccaccaacccatgatttccggccagactgagattatattggctaacattaatttcaagactttttcttgataaagtctaagggtg 15577850  T
Q  375 attattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctcttaataaaat 449  Q
    ||||||||| || ||||||||||||  ||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  15577851 attattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctaaataaaat 15577925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 283 - 440
Target Start/End: Complemental strand, 35444714 - 35444557
Alignment:
Q  283 ataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattct 382  Q
    |||||| |||||| || |||||||||||  ||| |||||||||||| | ||||||||||||  | || |||||||||||||||||||| |||||||||||    
T  35444714 ataacacccaccatcccatgattttcggccaggctgagattttattggttaacattaatttcagaactatttcttgataaaatctaagggtgattattct 35444615  T
Q  383 gtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctct 440  Q
    | || ||||||||||||  |||||||| |||||||||||| ||||||| |||||||||    
T  35444614 gccatgtcattcttgaaattttcttgaaaaaatctttcttaatatatagcattgctct 35444557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 275 - 443
Target Start/End: Original strand, 37476981 - 37477149
Alignment:
Q  275 aaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtg 374  Q
    |||||||||||||| ||||||||| ||||||| |||   |   ||||||||||| ||||||||||||||  | || ||||||||||||||| ||||  ||    
T  37476981 aaaaatacataacacccaccaccccatgatttccggcccgacagagattttattggctaacattaatttcagtacaatttcttgataaaatttaaggatg 37477080  T
Q  375 attattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctcttaa 443  Q
    ||||||||| || ||||||||| ||| |||||||| |||||||||||||||||||| ||||||||||||    
T  37477081 attattctgccatgtcattcttaaatttttcttgagaaaatctttcttgatatatagcattgctcttaa 37477149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 275 - 440
Target Start/End: Complemental strand, 18037142 - 18036977
Alignment:
Q  275 aaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtg 374  Q
    |||||||||||||| ||||||||| |||||||  ||   |   ||||||||||| ||||||||||||||  | || |||| |||||||||| |||| |||    
T  18037142 aaaaatacataacacccaccaccccatgatttctggcccgacagagattttattggctaacattaatttcagtacaattttttgataaaatttaagggtg 18037043  T
Q  375 attattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctct 440  Q
    ||||||||| || ||||||||| ||| |||||||| ||||||||||||||||||||||||||||||    
T  18037042 attattctgccatgtcattcttaaatttttcttgaaaaaatctttcttgatatatatcattgctct 18036977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 264 - 439
Target Start/End: Original strand, 25167739 - 25167915
Alignment:
Q  264 ctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataa 362  Q
    |||||||||| |||| |||||||||| ||| ||||| ||||||| |||  ||  |||||||||||| | ||||||||||||  | || ||||||||||||    
T  25167739 ctttcataaaaaaaagatacataacacccatcaccccatgatttccggccagactgagattttattggttaacattaatttcagaactatttcttgataa 25167838  T
Q  363 aatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    ||||||||  ||||||||||| || ||||||||| ||  |||||| | |||||||||||||||||||| ||||||||    
T  25167839 aatctaaggatgattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcattgctc 25167915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 275 - 439
Target Start/End: Complemental strand, 15238546 - 15238382
Alignment:
Q  275 aaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtg 374  Q
    ||||||| |||||| ||||||||| ||||||| |||   |   |||||||||||  |||||||||||||  | || |||||||||||||||||||  |||    
T  15238546 aaaaataaataacacccaccaccccatgatttccggcccgacagagattttattgactaacattaatttcagtacaatttcttgataaaatctaatggtg 15238447  T
Q  375 attattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    ||||||||| || ||||||||||||| |||||||| ||| | |||||||||||||| ||||||||    
T  15238446 attattctgccatgtcattcttgaatttttcttgagaaattttttcttgatatatagcattgctc 15238382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 230 - 411
Target Start/End: Complemental strand, 30848779 - 30848597
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttatt 328  Q
    |||||||| |||||||  | ||| ||||||||| |||||||||| |||| |||||||||| |||| | || ||||||| |||  ||  ||||||||||||    
T  30848779 taatcacctttaaatttcagtctcatttattaatctttcataaaaaaaagatacataacacccactatcccatgatttccggccagactgagattttatt 30848680  T
Q  329 agctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgata 411  Q
     | ||||||||||||  |||| ||||||||||||||||||||  ||||||||||| || ||||||||| ||  ||||||||||    
T  30848679 ggttaacattaatttcaggactatttcttgataaaatctaaggatgattattctgccatgtcattcttaaaattttcttgata 30848597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 360 - 435
Target Start/End: Complemental strand, 20009972 - 20009897
Alignment:
Q  360 taaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcatt 435  Q
    |||||||||||| |||||||| ||||| ||||||||||||||||| ||||||||||| ||| |||||| |||||||    
T  20009972 taaaatctaagtatgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcatgatatctatcatt 20009897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 319 - 413
Target Start/End: Original strand, 40880737 - 40880831
Alignment:
Q  319 agattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaa 413  Q
    |||||||||| ||||||||||||||  |||  ||||||| ||||||| ||||  ||||||||||| || ||||||||||| | ||||||||||||    
T  40880737 agattttattggctaacattaatttcaggataatttcttcataaaatttaaggatgattattctgccatgtcattcttgagtttttcttgataaa 40880831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 29737338 - 29737403
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||| ||||||||| || || || |||||| ||||||||||||||||||| ||||||||||    
T  29737338 aaatctaagggtgattattgtgacatgttattcttaaatctttcttgataaaatcattcttgatat 29737403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 4974606 - 4974542
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||| ||||||||| || || ||||||||||||||||| || |||||||| ||||||||||    
T  4974606 aaatctaagggtgattattgtgccatgtcattcttgaatcttt-tttataaaatcattcttgatat 4974542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 34483032 - 34483096
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || |||||||||||||||||||| |||||||| ||||||||||    
T  34483032 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 34483096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 48880798 - 48880734
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    |||||||| |||||||||| || || ||||||||||||| |||||| |||||||| ||||||||||    
T  48880798 aaatctaaatgtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 48880734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 24395165 - 24395229
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || ||||||||||||||||| || |||||||| ||||||||||    
T  24395165 aaatctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaatcattcttgatat 24395229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 25167727 - 25167663
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || ||||||||||||| |||||| |||||||| ||||||||||    
T  25167727 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 25167663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 35445591 - 35445655
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| |||||  |||||||||||| |||||| |||||||| ||||||||||    
T  35445591 aaatctaaaggtgattattgtgtcatatcattcttgaatttttctt-ataaaatcattcttgatat 35445655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 427
Target Start/End: Complemental strand, 36790336 - 36790283
Alignment:
Q  374 gattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | || |||||||    
T  36790336 gattattgtgtcatgtcattcttgaatctttgttgataaaaccattattgatat 36790283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 37476951 - 37476887
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||| ||||||||| || || |||||| || ||||||||||||| ||||| ||||||||||    
T  37476951 aaatctaagggtgattattgtgccatgtcattattaaatctttcttgat-aaatcattcttgatat 37476887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 42696277 - 42696342
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||| ||||||||| |  || ||||||||||||| ||| ||||||||||| || |||||||    
T  42696277 aaatctaagggtgattattgtaccatgtcattcttgaattttttttgataaaatcattattgatat 42696342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 45637905 - 45637969
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || |||||||||||||||||||| |||||||| ||||| ||||    
T  45637905 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttaatat 45637969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 5e-57; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 230 - 442
Target Start/End: Complemental strand, 14138877 - 14138665
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttatta 329  Q
    |||||||| ||| |||  ||||| ||||||||| |||||||||| |||||||||||||| ||||||||| ||||||| || | ||| ||||||||||||     
T  14138877 taatcacctttagatttcaatctcatttattaatctttcataaaaaaaaatacataacacccaccaccccatgatttccgatcaggctgagattttattg 14138778  T
Q  330 gctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatat 429  Q
    ||||||||||||||  |||| ||||||||||||||| |||| |||||||||||| || || |||||||||  ||||||||||||||||||||||||||||    
T  14138777 gctaacattaatttcaggactatttcttgataaaatttaagggtgattattctgccatgtaattcttgaaattttcttgataaaatctttcttgatatat 14138678  T
Q  430 atcattgctctta 442  Q
    | |||||||||||    
T  14138677 aacattgctctta 14138665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 248 - 439
Target Start/End: Original strand, 11361004 - 11361196
Alignment:
Q  248 aatcttatttattaacctttcata-aacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgg 346  Q
    ||||| ||||||||| |||||||| || |||||||||||||| ||||||||| ||||||| |||  ||| |||||||||||| ||||||||||||||  |    
T  11361004 aatctaatttattaatctttcatacaaaaaaaatacataacacccaccaccccatgatttccggccaggctgagattttattggctaacattaatttcag 11361103  T
Q  347 gacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    ||| |||||||||||||||||||| |||||||||||| || ||||||||| ||  ||||||||||||||||||||||||||||| ||||||||    
T  11361104 gactatttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 11361196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 31640501 - 31640605
Alignment:
Q  11 gagtccagaagaaagtcatgaccagctgcgtttgtgagcacctgaagaaatgaccatgtttgttcttgcacaggatcgcgtcgtggacaatcaaggtctc 110  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31640501 gagtccagaagaaagtcatgaccagctgcgtttgcgagcacctgaagaaatgaccatgtttgttcttgcacaggatcgcgtcgtggacaatcaaggtctc 31640600  T
Q  111 gtcac 115  Q
    |||||    
T  31640601 gtcac 31640605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 243 - 411
Target Start/End: Original strand, 31640809 - 31640977
Alignment:
Q  243 attgaaatcttatttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaatt 342  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||| |||  ||| |||||||||||| |||||||||||||    
T  31640809 attgatatcttatttattaacctttcataaaaaaaaatacataacacccaccaccccatgatttccggccaggctgagattttattggctaacattaatt 31640908  T
Q  343 ttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgata 411  Q
    |   ||| |||||||||||||||||||| ||| |||||||| || ||||||||||||||||||||||||    
T  31640909 tcatgacaatttcttgataaaatctaagggtggttattctgccatgtcattcttgaatctttcttgata 31640977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 250 - 441
Target Start/End: Complemental strand, 2477826 - 2477634
Alignment:
Q  250 tcttatttattaacctttcataaacaaaaa-tacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttggga 348  Q
    ||||||||||||| |||||||||| ||||| ||||||||| ||||||||| ||||||| |||  ||| ||| ||||||||  |||||||||||||   ||    
T  2477826 tcttatttattaatctttcataaaaaaaaaatacataacacccaccaccccatgatttccggccaggctgaaattttattgactaacattaatttcaaga 2477727  T
Q  349 cgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    | |||||||||||||||||||| |||||||||||| || ||||||||| ||  ||||||||||||||||||||||||||||| ||||||||||    
T  2477726 ctatttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 2477634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 254 - 442
Target Start/End: Original strand, 6043391 - 6043579
Alignment:
Q  254 atttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatt 353  Q
    ||||||||| |||||||||| |||||||||||||| ||| ||||| ||||||| |||  ||| |||||||||||| | ||| ||||||||  | || |||    
T  6043391 atttattaatctttcataaaaaaaaatacataacacccaacaccccatgatttccggccaggctgagattttattggttaatattaatttcagcactatt 6043490  T
Q  354 tcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctta 442  Q
    ||||||||||||||||| |||||||||||  || ||||||||||||  ||||||||||||||||||||||||||||| |||||||||||    
T  6043491 tcttgataaaatctaagggtgattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctta 6043579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 254 - 441
Target Start/End: Complemental strand, 8145559 - 8145373
Alignment:
Q  254 atttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatt 353  Q
    ||||||||| |||||||||| |||||||||||||| ||||||||| ||||||| ||   ||| |||||||||||| |||||||||| |||   ||| |||    
T  8145559 atttattaatctttcataaaaaaaaatacataacacccaccaccc-atgatttccgaccaggctgagattttattggctaacattagtttcaagactatt 8145461  T
Q  354 tcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||  ||||||||||||||||||||||||||||| |||| |||||    
T  8145460 tcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattcctctt 8145373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 254 - 448
Target Start/End: Complemental strand, 25398424 - 25398229
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||||| ||||||||| ||||||| |||  ||| |||||||||||| | ||||||||||||  |||| ||    
T  25398424 atttattaatctttcataaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactat 25398325  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctcttaataaaa 448  Q
    |||||||||||||||||| |||||||||||| || ||||||||| ||  |||||||| |||||||||||||||||||| |||||||| | ||||||    
T  25398324 ttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctcgtcataaaa 25398229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 254 - 445
Target Start/End: Original strand, 33584208 - 33584400
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||||| ||||||||| ||||||| |||  ||| |||||||||||| | ||||||||||||  |||| ||    
T  33584208 atttattaatctttcataaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactat 33584307  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctcttaata 445  Q
    ||||||||||||| |||| |||||||||||| || ||||||||| ||  |||||||| |||||||||||||||||||| |||||||| |||||    
T  33584308 ttcttgataaaatttaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctcataata 33584400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 254 - 440
Target Start/End: Original strand, 38899605 - 38899792
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| ||| |||||| ||||||||| |||||||||||  ||  |||||||||||| | ||||||||||||  |||| ||    
T  38899605 atttattaatctttcataaaaaaaagatatataacacccaccaccccatgattttcggccagactgagattttattggttaacattaatttcaggactat 38899704  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctct 440  Q
    |||||||||||||||||| ||| |||||||| || |||||||||| |  ||||||||||||||||||||||||||||| |||||||||    
T  38899705 ttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 38899792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 250 - 444
Target Start/End: Original strand, 4433883 - 4434077
Alignment:
Q  250 tcttatttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggac 349  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||| || ||||||| |||  ||  |||||||||||| | ||||||||||||  | ||    
T  4433883 tcttatttattaatctttcataaaaaaaaatacataacacccaccatcccatgatttccggccagactgagattttattggttaacattaatttcagaac 4433982  T
Q  350 gatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctcttaat 444  Q
     |||||||||||||||||||| |||||||||||| ||  |||||||||||  |||||| | |||||||||||||||||||| |||||||| ||||    
T  4433983 tatttcttgataaaatctaagggtgattattctgccatatcattcttgaaattttcttaaaaaaatctttcttgatatatagcattgctcataat 4434077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 254 - 440
Target Start/End: Complemental strand, 3362965 - 3362777
Alignment:
Q  254 atttattaacctttcataaacaaaaa--tacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacga 351  Q
    ||||||||| |||||||||| |||||  ||||||||| ||||||||| ||||||| |||  ||  |||||||||||| | ||||||||||||  |||| |    
T  3362965 atttattaatctttcataaaaaaaaagatacataacacccaccaccccatgatttccggccagactgagattttattggttaacattaatttcaggacta 3362866  T
Q  352 tttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctct 440  Q
    ||||||||||||||||||| ||| |||||||| || |||||||||| |  ||||||||||||||||||||||||||||| |||||||||    
T  3362865 tttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 3362777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 254 - 441
Target Start/End: Complemental strand, 4892388 - 4892200
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| ||||||| || | || |||||||||| ||||||||| ||||||| |||  ||| |||||||||||| | ||||||||||||  |||| ||    
T  4892388 atttattaatctttcattaaaagaagatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactat 4892289  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    |||||||||||||||||| |||||||||||| || ||||||||| ||  |||||||| |||||||||||||||||||| ||||||||||    
T  4892288 ttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctctt 4892200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 254 - 439
Target Start/End: Complemental strand, 12850988 - 12850801
Alignment:
Q  254 atttattaacctttcataaacaa--aaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacga 351  Q
    ||||||||| |||||||||| ||  |||||||||||| ||||||||| ||||||| |||  ||| |||||||||||| | ||||||||||||  |||| |    
T  12850988 atttattaatctttcataaaaaagaaaatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggacta 12850889  T
Q  352 tttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    ||||||||||||||||||| ||| |||||||| || |||||| ||| |  ||||||||||||||||||||||||||||| ||||||||    
T  12850888 tttcttgataaaatctaagggtggttattctgccatgtcatttttggaattttcttgataaaatctttcttgatatatagcattgctc 12850801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 267 - 439
Target Start/End: Original strand, 22912947 - 22913119
Alignment:
Q  267 tcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatc 366  Q
    ||||||| |||||||||||||||||||||||| |||||||  ||   |   ||||||||||| ||||||||||||||  | || ||||||||||||||||    
T  22912947 tcataaaaaaaaatacataacatccaccaccccatgatttctggcccgacagagattttattggctaacattaatttcagtacaatttcttgataaaatc 22913046  T
Q  367 taagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    |||| |||||||||||| || ||||||||||||| |||||||| |||||||||||||||||||| ||||||||    
T  22913047 taagggtgattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatatatagcattgctc 22913119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 317 - 439
Target Start/End: Original strand, 12614676 - 12614798
Alignment:
Q  317 tgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatc 416  Q
    |||||||||||| ||||||||||||||  |||| |||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||     
T  12614676 tgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattatgtcatgtcattcttgaatctttcttgataaaata 12614775  T
Q  417 tttcttgatatatatcattgctc 439  Q
    |||||||||||||| ||||||||    
T  12614776 tttcttgatatatagcattgctc 12614798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 254 - 439
Target Start/End: Original strand, 37321672 - 37321859
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||||| ||||||||| ||||||| ||| |||  |||||||||||| ||||||||||||||   ||| ||    
T  37321672 atttattaatctttcataaataaaaaatacataacacccaccaccccatgatttccggctagactgagattttattggctaacattaatttcaagactat 37321771  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttctt-gatatatatcattgctc 439  Q
    || |||||||||| |||| |||||||||||| || ||||||||| ||  ||||||||||||||||||||| |||||||| ||||||||    
T  37321772 ttattgataaaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttagatatatagcattgctc 37321859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 114 - 226
Target Start/End: Original strand, 31640632 - 31640739
Alignment:
Q  114 acaagctctactcattgacatcaaaccaattgtatctccattaaatcctatagttaattttctaatttttgtatcatattgacttattctacttctctat 213  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||||||| |||    
T  31640632 acaagctctactcattggcatcaaaccaattgtatctccattaaatcctatagttaattttctaatttttgtatcata-----ttattctacttctgtat 31640726  T
Q  214 tagttcctcaact 226  Q
    ||||||| |||||    
T  31640727 tagttccacaact 31640739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 248 - 435
Target Start/End: Complemental strand, 27482014 - 27481830
Alignment:
Q  248 aatcttatttattaacctttcataaacaaaaa-tacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgg 346  Q
    |||||||||||||||||||| ||||| ||||| ||||||||| ||||||||| ||||||| ||  |||| ||| |||||||| |||||||||||||| |     
T  27482014 aatcttatttattaaccttttataaaaaaaaaatacataacacccaccaccccatgatttccgactaggatgaaattttattggctaacattaatttcgt 27481915  T
Q  347 gacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcatt 435  Q
    ||| ||||||| |||||| |||| |||||||||||   || ||||||||||||| ||||||||||||||||||||| ||| ||| ||||    
T  27481914 gacaatttcttcataaaa-ctaaatgtgattattc---catgtcattcttgaatttttcttgataaaatctttcttaatacatagcatt 27481830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 254 - 439
Target Start/End: Original strand, 3521886 - 3522071
Alignment:
Q  254 atttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatt 353  Q
    ||||||||| |||||||||| ||| |||||||||| ||||||||| ||||||| |||  |   | |||||||||| | ||||||||||||  | || |||    
T  3521886 atttattaatctttcataaaaaaagatacataacacccaccaccccatgatttccggccaaactaagattttattggttaacattaatttcagaactatt 3521985  T
Q  354 tcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    ||||||||||||||||  |||||||||||| || |||||| |||||  |||||||| |||||||||||||||||||| ||||||||    
T  3521986 tcttgataaaatctaatggtgattattctgccatgtcatttttgaaattttcttgaaaaaatctttcttgatatataacattgctc 3522071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 275 - 439
Target Start/End: Original strand, 17545586 - 17545750
Alignment:
Q  275 aaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtg 374  Q
    ||||||| |||||| ||||||||| ||||||| |||   |   |||||||||||  |||||||||||||  | || |||||||||||||||||||  |||    
T  17545586 aaaaataaataacacccaccaccccatgatttccggcccgacagagattttattgactaacattaatttcagtacaatttcttgataaaatctaatggtg 17545685  T
Q  375 attattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    ||||||||| || ||||||||||||| |||||||| ||| | |||||||||||||| ||||||||    
T  17545686 attattctgccatgtcattcttgaatttttcttgagaaattttttcttgatatatagcattgctc 17545750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 31640964 - 31641010
Alignment:
Q  413 aatctttcttgatatatatcattgctcttaataaaatgatgctacta 459  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||    
T  31640964 aatctttcttgatatatagcattgctcttaataaaatgatgttacta 31641010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 22912928 - 22912864
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||| ||||||||| || || ||||||||||||||||||||||| ||||| ||||||||||    
T  22912928 aaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatat 22912864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 422
Target Start/End: Original strand, 27482016 - 27482077
Alignment:
Q  361 aaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttctt 422  Q
    |||||||||  ||||||||||||| | ||||||||||||||||| ||||||||||| |||||    
T  27482016 aaaatctaaaggtgattattctgttatgtcattcttgaatcttttttgataaaatcattctt 27482077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 427
Target Start/End: Complemental strand, 10458464 - 10458409
Alignment:
Q  372 gtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||| || || ||||||||||||| |||||||||||||| |||||||||||    
T  10458464 gtgattattttgccatgtcattcttgaatttttcttgataaaatttttcttgatat 10458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 8145567 - 8145631
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || |||||||||||||||||||| |||||||| ||||||||||    
T  8145567 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 8145631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 440
Target Start/End: Complemental strand, 13664679 - 13664641
Alignment:
Q  402 tttcttgataaaatctttcttgatatatatcattgctct 440  Q
    ||||||||||||||||||||| ||||||| |||||||||    
T  13664679 tttcttgataaaatctttcttaatatataacattgctct 13664641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 4892396 - 4892460
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || ||||||||||||| |||||| |||||||| ||||||||||    
T  4892396 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 4892460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 12614609 - 12614544
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || ||||||||| ||||||| ||||||||||| | ||||||||    
T  12614609 aaatctaaaggtgattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatat 12614544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 14138861 - 14138925
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || |||||||||||||||||||| |||||||| ||||| ||||    
T  14138861 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttaatat 14138925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 411
Target Start/End: Complemental strand, 31640800 - 31640763
Alignment:
Q  374 gattattctgtcacgtcattcttgaatctttcttgata 411  Q
    |||||||||| || ||||||||||||||||||||||||    
T  31640800 gattattctgccatgtcattcttgaatctttcttgata 31640763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 33584200 - 33584136
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || ||||||||||||| |||||| |||||||| ||||||||||    
T  33584200 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 33584136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 5e-57; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 250 - 439
Target Start/End: Complemental strand, 9723596 - 9723405
Alignment:
Q  250 tcttatttattaacctttcataaacaaaaa--tacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttggg 347  Q
    ||||||||||| || ||||||||| |||||  ||||||||| ||||||||| ||||||| |||| ||| ||||||||||||||||||||||||||| |||    
T  9723596 tcttatttattcacttttcataaaaaaaaaaatacataacacccaccaccccatgatttccggtgaggctgagattttattagctaacattaatttcggg 9723497  T
Q  348 acgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    || ||||||||||||||| |||| ||||||||||||||| ||||||||| |||||||||| |||||||||||||| ||||||| ||||||||    
T  9723496 acaatttcttgataaaatttaagggtgattattctgtcatgtcattcttaaatctttcttaataaaatctttcttaatatatagcattgctc 9723405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 230 - 441
Target Start/End: Original strand, 9293430 - 9293643
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaacaaaa--atacataacatccaccaccctatgattttcggttaggttgagattttat 327  Q
    |||||||||||| |||  | ||| ||||||||| |||||||||| ||||  |||||||||| ||||||||| ||||||| |||  ||| |||||||||||    
T  9293430 taatcacccttagatttcagtctcatttattaatctttcataaaaaaaaaaatacataacacccaccaccccatgatttccggccaggctgagattttat 9293529  T
Q  328 tagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    | ||||||||||||||  |||| |||||||||||||||||||| |||||||||||| || ||||||||||||  ||||||||||||||||||||||||||    
T  9293530 tggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatat 9293629  T
Q  428 atatcattgctctt 441  Q
    ||| ||||||||||    
T  9293630 atagcattgctctt 9293643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 248 - 441
Target Start/End: Original strand, 31174708 - 31174901
Alignment:
Q  248 aatcttatttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttggg 347  Q
    ||||| ||||||||| |||||||||| |||||||||||||| ||||||||| ||||||| |||| ||  |||||||||||| ||||||||||||||  ||    
T  31174708 aatctcatttattaatctttcataaaaaaaaatacataacacccaccaccccatgatttccggtcagactgagattttattggctaacattaatttcagg 31174807  T
Q  348 acgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    || |||||||||||||||||||| |||||||||||| || ||||||||||||  |||||| |||||||||||||||||||||| ||||| ||||    
T  31174808 actatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatatataacattgttctt 31174901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 254 - 447
Target Start/End: Original strand, 7475387 - 7475581
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||||| ||||||||| ||||||| |||  ||| |||||||||||| | ||||||||||||  |||| ||    
T  7475387 atttattaatctttcataaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactat 7475486  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctcttaataaa 447  Q
    |||||||||||||||||| ||||||||||| ||| ||||||||||||  |||||||| |||||||||||||||||||| ||||||||| ||||||    
T  7475487 ttcttgataaaatctaagggtgattattctatcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctaaataaa 7475581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 230 - 440
Target Start/End: Original strand, 14941219 - 14941432
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaac----aaaaatacataacatccaccaccctatgattttcggttaggttgagatttt 325  Q
    |||||| ||||| |||  ||||||||||||||||||||||||||     |||||||||||||| ||||||||  |||||||  ||  ||| ||||||||     
T  14941219 taatcatccttagatttcaatcttatttattaacctttcataaaataaaaaaaatacataacacccaccacctcatgatttctggccaggctgagattt- 14941317  T
Q  326 attagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgat 425  Q
    ||| ||||||||||||||  |||| |||||||||||||||||||| |||||||||||| || |||||||||||||||||||| |||||||||||||||||    
T  14941318 attggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaatctttcttaataaaatctttcttgat 14941417  T
Q  426 atatatcattgctct 440  Q
    ||||| |||||||||    
T  14941418 atatagcattgctct 14941432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 254 - 438
Target Start/End: Complemental strand, 10662074 - 10661888
Alignment:
Q  254 atttattaacctttcataaacaaaaa--tacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacga 351  Q
    ||||||||| |||||||||| |||||  ||||||||| ||||||||||||||||| |||  ||| |||||||||||| | ||||||||||||  |||| |    
T  10662074 atttattaatctttcataaaaaaaaagatacataacacccaccaccctatgatttccggccaggctgagattttattggttaacattaatttcaggacta 10661975  T
Q  352 tttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgct 438  Q
    ||||||||||||||||||| |||||||||||| || ||||||||| ||  ||||||||||||||||||||||||||||| |||||||    
T  10661974 tttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgct 10661888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 254 - 442
Target Start/End: Original strand, 23267941 - 23268130
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||||| ||||||||| ||||||| |||  ||  |||||||||||| | ||||||||||||  |||| ||    
T  23267941 atttattaatctttcataaaaaaaagatacataacacccaccaccccatgatttccggccagactgagattttattggttaacattaatttcaggactat 23268040  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctta 442  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||  |||||||| |||||||||||||||||||| |||||||||||    
T  23268041 ttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctta 23268130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 254 - 440
Target Start/End: Complemental strand, 35160945 - 35160756
Alignment:
Q  254 atttattaacctttcataaacaaaaa---tacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacg 350  Q
    ||||||||| |||||||||| |||||   ||||||||| ||||||||| ||||||| |||  ||| |||||||||||| | ||||||||||||  ||||     
T  35160945 atttattaatctttcataaaaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggact 35160846  T
Q  351 atttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctct 440  Q
    |||||||||||||||||||| |||||||||||| || ||||||||| ||  ||||||||||||||||||||||||||||| |||||||||    
T  35160845 atttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 35160756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 254 - 439
Target Start/End: Complemental strand, 21936268 - 21936081
Alignment:
Q  254 atttattaacctttcataaacaaaaa-tacataacatccaccaccctatgattttcggttaggtt-gagattttattagctaacattaattttgggacga 351  Q
    ||||||||| |||||||||| ||||| ||||||||| ||||||||| ||||||| |||  ||| | ||||||||||| ||||||||||||||   ||| |    
T  21936268 atttattaatctttcataaaaaaaaaatacataacacccaccaccccatgatttccggccaggctagagattttattggctaacattaatttcaagacta 21936169  T
Q  352 tttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    ||||||||||||||||||| |||||||||||| ||  |||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  21936168 tttcttgataaaatctaagggtgattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 21936081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 279 - 441
Target Start/End: Complemental strand, 27847792 - 27847630
Alignment:
Q  279 atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtgatta 378  Q
    |||||||||| ||||||||| |||||||  ||| ||| ||||||||||||  |||||||||||||  |||| |||| ||||||||||||||  |||||||    
T  27847792 atacataacacccaccaccccatgatttctggtcaggctgagattttattgactaacattaatttcaggacaattttttgataaaatctaacggtgatta 27847693  T
Q  379 ttctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    |||||||| |||||||||||||||||||| |||||||||||||| ||||| | ||||||||||    
T  27847692 ttctgtcatgtcattcttgaatctttcttaataaaatctttctttatatacagcattgctctt 27847630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 254 - 439
Target Start/End: Complemental strand, 33380393 - 33380207
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| ||||||| || |||| |||||||||| ||||||||| ||||||| |||  ||| |||||||||||| | ||||||||||||  |||| ||    
T  33380393 atttattaatctttcattaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactat 33380294  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    |||||||||||||||||| |||||||||| | || ||||||||| ||  |||||||| |||||||||||||||||||| ||||||||    
T  33380293 ttcttgataaaatctaagggtgattattcagccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 33380207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 254 - 441
Target Start/End: Complemental strand, 13355034 - 13354844
Alignment:
Q  254 atttattaacctttcataaacaaaaa--tacataacatccaccaccctatgattttcggttaggtt-gagattttattagctaacattaattttgggacg 350  Q
    ||||||||| |||||||||| |||||  ||||||||| ||||||| | ||||||| |||  ||| | ||||||||||| ||||||||||||||   |||     
T  13355034 atttattaatctttcataaaaaaaaaaatacataacacccaccactccatgatttccggccaggctagagattttattggctaacattaatttcaagact 13354935  T
Q  351 atttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    |||||||||||||||||||| || ||||||||| ||  |||||||||||  ||||||||||||||||||||||||||||| ||||||||||    
T  13354934 atttcttgataaaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatataacattgctctt 13354844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 275 - 442
Target Start/End: Complemental strand, 43331076 - 43330909
Alignment:
Q  275 aaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtg 374  Q
    |||||||||||||| ||||||||| ||||||| |||   |   || |||||||| ||||||||||||||  | || |||||||||||||||||||| |||    
T  43331076 aaaaatacataacacccaccaccccatgatttccggcccgacagaaattttattggctaacattaatttcagtacaatttcttgataaaatctaagggtg 43330977  T
Q  375 attattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctta 442  Q
    ||||||||| || ||||||||||||| ||| |||| |||||||||||||||||||| |||||||||||    
T  43330976 attattctgccatgtcattcttgaattttttttgagaaaatctttcttgatatatagcattgctctta 43330909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 254 - 411
Target Start/End: Complemental strand, 3989262 - 3989104
Alignment:
Q  254 atttattaacctttcataaacaaaaa-tacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| ||||| ||||||||| ||||||||| ||||||| |||  ||  |||||||||||| ||||||||||||||   ||| ||    
T  3989262 atttattaatctttcataaaaaaaaaatacataacacccaccaccccatgatttccggccagactgagattttattggctaacattaatttcaagactat 3989163  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgata 411  Q
    |||||||||||||||||| |||||||||||| || ||||||||| ||  ||||||||||    
T  3989162 ttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgata 3989104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 275 - 437
Target Start/End: Original strand, 21393589 - 21393751
Alignment:
Q  275 aaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtg 374  Q
    |||||||||||||| ||||||||| ||||||| |||   |    |||||||||| | ||||||||||||  | || |||||||||||||||||||| |||    
T  21393589 aaaaatacataacacccaccaccccatgatttccggcccgacatagattttattggttaacattaatttcagtacaatttcttgataaaatctaagggtg 21393688  T
Q  375 attattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgc 437  Q
    ||||||||  || ||||||||| ||| |||||||| ||||| |||||||||||||| ||||||    
T  21393689 attattctaccatgtcattcttaaatttttcttgagaaaatttttcttgatatatagcattgc 21393751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 290 - 427
Target Start/End: Complemental strand, 22591631 - 22591494
Alignment:
Q  290 ccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgt 389  Q
    ||||||||| ||||||| | | |||| |||||||||||| ||||||||||||||  |||| ||||||| ||||||| |||| | |||||||||| ||  |    
T  22591631 ccaccaccccatgatttcctgctaggctgagattttattggctaacattaatttcaggacaatttcttaataaaatttaagggggattattctgccatat 22591532  T
Q  390 cattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||||| ||| || |||||||||||||||||||    
T  22591531 cattcttgaattttttttaataaaatctttcttgatat 22591494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 252 - 367
Target Start/End: Original strand, 40262613 - 40262729
Alignment:
Q  252 ttatttattaacctttcataaacaa-aaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacg 350  Q
    |||||| ||||| ||||||||| || |||||||||||| ||||||||| || |||| |||| ||| |||||||||||| ||||| |||||||| |||||     
T  40262613 ttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatttccggtcagggtgagattttattggctaatattaatttcgggaca 40262712  T
Q  351 atttcttgataaaatct 367  Q
    |||||||||||||||||    
T  40262713 atttcttgataaaatct 40262729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 275 - 382
Target Start/End: Original strand, 16767373 - 16767480
Alignment:
Q  275 aaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtg 374  Q
    |||||||||||||| ||||||||||||||||| |||  ||  |||||||||||| ||||||||||||||  |||  ||||||||||||||| |||| |||    
T  16767373 aaaaatacataacacccaccaccctatgatttccggccagactgagattttattggctaacattaatttcaggataatttcttgataaaatttaagagtg 16767472  T
Q  375 attattct 382  Q
    ||||||||    
T  16767473 attattct 16767480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 361 - 427
Target Start/End: Original strand, 22592905 - 22592971
Alignment:
Q  361 aaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    |||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  22592905 aaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 22592971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 9293446 - 9293382
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||    
T  9293446 aaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 9293382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 9723600 - 9723665
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||||||||| ||||||||| ||| ||||||||| ||||| ||||||||||    
T  9723600 aaatctaaaggtgattattctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatat 9723665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 410
Target Start/End: Complemental strand, 16767333 - 16767285
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgat 410  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||||||||    
T  16767333 aaatctaagagtgattattgtgtcatgtcattcttgaatctttcttgat 16767285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 407
Target Start/End: Complemental strand, 37335829 - 37335745
Alignment:
Q  323 tttattagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttctt 407  Q
    |||||| |||||||||||| |  | || |||| |||||| |||||||  |||||||||||| || ||||||||||||||||||||    
T  37335829 tttattggctaacattaatatcagaacaattttttgatacaatctaaaagtgattattctgccatgtcattcttgaatctttctt 37335745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 10662082 - 10662146
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| ||||| ||||||||||||| |||||| |||||||| ||||||||||    
T  10662082 aaatctaaaggtgattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatat 10662146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 427
Target Start/End: Complemental strand, 31174692 - 31174642
Alignment:
Q  376 ttattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||| ||||| |||||||||||||||||||| |||||||| ||||||||||    
T  31174692 ttattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 31174642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 416
Target Start/End: Original strand, 37335838 - 37335892
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatc 416  Q
    ||||||||| ||||||| | ||||| |||||| || |||||||||||||||||||    
T  37335838 aaatctaagggtgattactgtgtcatgtcattattaaatctttcttgataaaatc 37335892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 436
Target Start/End: Original strand, 40262714 - 40262748
Alignment:
Q  402 tttcttgataaaatctttcttgatatatatcattg 436  Q
    ||||||||||||||||||||||||||||| |||||    
T  40262714 tttcttgataaaatctttcttgatatataacattg 40262748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 7475379 - 7475315
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| |||||  |||||||||||| |||||| |||||||| ||||||||||    
T  7475379 aaatctaaaggtgattattatgtcatatcattcttgaatttttctt-ataaaatcattcttgatat 7475315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 21393556 - 21393493
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    |||| |||| ||||||||| ||||| ||||||||||||| ||||||||| ||||| ||||||||||    
T  21393556 aaatttaagggtgattattgtgtcatgtcattcttgaat-tttcttgat-aaatcattcttgatat 21393493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 33380401 - 33380465
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || ||||||||||||| |||||| |||||||| ||||||||||    
T  33380401 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 33380465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 35160953 - 35161017
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || ||||||||||||| |||||| |||||||| ||||||||||    
T  35160953 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 35161017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 43331106 - 43331170
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| |  || ||||||||||||||||||||||| ||||| ||||||||||    
T  43331106 aaatctaaaggtgattattgtaccatgtcattcttgaatctttcttgat-aaatcattcttgatat 43331170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 1e-54; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 254 - 439
Target Start/End: Original strand, 49387766 - 49387953
Alignment:
Q  254 atttattaacctttcataaacaaaaa--tacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacga 351  Q
    ||||||||| |||||||||| |||||  ||||||||||||||||||| ||||||| ||| |||| |||||||||||| | ||||||||||||  |||| |    
T  49387766 atttattaatctttcataaaaaaaaagatacataacatccaccaccccatgatttccggctaggctgagattttattggttaacattaatttcaggacta 49387865  T
Q  352 tttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    ||||||||||||||||||| |||||||||||| || ||||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  49387866 tttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 49387953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 230 - 438
Target Start/End: Original strand, 7744967 - 7745176
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttatt 328  Q
    |||||||| ||| |||  ||||| |||||||||  ||||||||| |||| |||||||||| ||||||||| ||||||| |||  ||| ||||||||||||    
T  7744967 taatcacctttagatttcaatctcatttattaatatttcataaaaaaaaaatacataacacccaccaccccatgatttccggccaggctgagattttatt 7745066  T
Q  329 agctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatata 428  Q
     ||||||||||||||  |||| |||||||||||||||||||| |||||||||||| || ||||||||| ||  |||||||||||||||||||||||||||    
T  7745067 ggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatata 7745166  T
Q  429 tatcattgct 438  Q
    || |||||||    
T  7745167 tagcattgct 7745176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 248 - 440
Target Start/End: Original strand, 31078692 - 31078885
Alignment:
Q  248 aatcttatttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgg 346  Q
    ||||| ||||||||| |||||||||| |||| |||||||||| ||| ||||| ||||||| |||  ||| |||||||||||| | ||||||||||||  |    
T  31078692 aatctcatttattaatctttcataaaaaaaagatacataacacccatcaccccatgatttccggccaggctgagattttattggttaacattaatttcag 31078791  T
Q  347 gacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctct 440  Q
    ||| |||||||||||||||||||| |||||||||||| || ||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  31078792 gactatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 31078885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 230 - 441
Target Start/End: Original strand, 21802175 - 21802389
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaacaaaaatacataacatccaccacc---ctatgattttcggttaggttgagatttta 326  Q
    |||||||||||| |||  | ||| ||||||||| |||||||||| |||||||||||||| ||||||||   | ||||||| |||  ||  ||||||||||    
T  21802175 taatcacccttagatttcagtctcatttattaatctttcataaaaaaaaatacataacacccaccaccaccccatgatttccggccagactgagatttta 21802274  T
Q  327 ttagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgata 426  Q
    || ||||||||||||||  |||| |||||||||||||||||||| |||||||||||| || ||||||||||||  |||||||||||||| ||||||||||    
T  21802275 ttggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgata 21802374  T
Q  427 tatatcattgctctt 441  Q
    |||| ||||||||||    
T  21802375 tatagcattgctctt 21802389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 254 - 441
Target Start/End: Complemental strand, 24128425 - 24128237
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||||||||||||||| ||||||| |||  ||| |||||||||||| | ||||||||||||  |||| ||    
T  24128425 atttattaatctttcataaaaaaaagatacataacatccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactat 24128326  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    ||||||||||||||||||  ||||||||||| || ||||||||||||  |||||||| |||||||||||||||||||| ||||||||||    
T  24128325 ttcttgataaaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 24128237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 275 - 446
Target Start/End: Original strand, 10442690 - 10442861
Alignment:
Q  275 aaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtg 374  Q
    ||||| |||||||| ||||||||| ||||||| |||  ||| |||||||||||| ||||||||||||||  |||| |||||||||||||||||||| |||    
T  10442690 aaaaaaacataacacccaccaccccatgatttccggccaggctgagattttattggctaacattaatttcaggactatttcttgataaaatctaagggtg 10442789  T
Q  375 attattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctcttaataa 446  Q
    ||||||||| || ||||||||||||  ||||||||||||||||||||||||||||| |||||||||| ||||    
T  10442790 attattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctttataa 10442861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 254 - 447
Target Start/End: Complemental strand, 36073535 - 36073342
Alignment:
Q  254 atttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatt 353  Q
    ||||||||| |||||||||| ||| |||||||||| ||||||||| ||||||| |||| ||| |||||||||||| | ||||||||||||   ||  |||    
T  36073535 atttattaatctttcataaaaaaagatacataacacccaccaccccatgatttccggtcaggctgagattttattggttaacattaatttcatgaatatt 36073436  T
Q  354 tcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctcttaataaa 447  Q
    |||||||||||| |||| |||||||||||| || ||||||||||||  |||||||| |||||||||||||||||||| |||| |||||||||||    
T  36073435 tcttgataaaatttaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattcctcttaataaa 36073342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 254 - 441
Target Start/End: Complemental strand, 44893612 - 44893424
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||||| |||||| || |||||||||||  ||| |||||||||||| | ||||||||||||  |||| ||    
T  44893612 atttattaatctttcataaaaaaaagatacataacacccaccatcccatgattttcggccaggctgagattttattggttaacattaatttcaggactat 44893513  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||  ||| |||| |||||||||||||||||||| ||||||||||    
T  44893512 ttcttgataaaatctaagggtgattattctgccatgtcattcttgaaatttttttgaaaaaatctttcttgatatatagcattgctctt 44893424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 254 - 441
Target Start/End: Complemental strand, 47290252 - 47290064
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||  |||||||||| |||| |||||||||| ||||||||| ||||||| |||  ||| |||||||||||| | ||||||||||||  |||| ||    
T  47290252 atttattattctttcataaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactat 47290153  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||  |||||||| |||||||||||||||||||| ||||||||||    
T  47290152 ttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 47290064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 254 - 444
Target Start/End: Complemental strand, 46442030 - 46441839
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||||| ||||||||| ||||||| |||  |||||||||||||||| | ||||||||||||  |||| ||    
T  46442030 atttattaatctttcataaaaaaaagatacataacacccaccaccccatgatttccggccaggttgagattttattggttaacattaatttcaggactat 46441931  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctcttaat 444  Q
    |||||||||||||||||| ||||||||| || || ||||||||||||  |||||| | |||||||||||||||||||| |||||||| ||||    
T  46441930 ttcttgataaaatctaagggtgattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatatatagcattgctcataat 46441839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 254 - 439
Target Start/End: Complemental strand, 22199445 - 22199261
Alignment:
Q  254 atttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatt 353  Q
    ||||||||| |||||||||| |||||||||||||| ||||||||| |||||||  ||  ||| |||||||||||| |||||||||| |||   ||| |||    
T  22199445 atttattaatctttcataaaaaaaaatacataacacccaccaccc-atgatttctggccaggctgagattttattggctaacattagtttcaagactatt 22199347  T
Q  354 tcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    |||||||||||||||||  ||||||||||| || ||||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  22199346 tcttgataaaatctaaggctgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 22199261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 248 - 441
Target Start/End: Original strand, 23964337 - 23964532
Alignment:
Q  248 aatcttatttattaacctttcataaacaaaa--atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttg 345  Q
    ||||| ||||||||| |||||||||| ||||  |||||||||| ||||||||  ||||||| |||| ||| ||||||||||||  |||||||||||||      
T  23964337 aatctcatttattaatctttcataaaaaaaaaaatacataacacccaccaccgcatgatttccggtcaggctgagattttattgactaacattaatttca 23964436  T
Q  346 ggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
     ||| |||||||||||||||||||| |||||||||||| || ||||||||| ||  ||| ||||||||||||||||||||||||| ||||||||||    
T  23964437 agactatttcttgataaaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatataacattgctctt 23964532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 254 - 441
Target Start/End: Original strand, 50156457 - 50156645
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||||| ||||||||| ||||||| |||  ||| |||||||||||| | |||||||||||||  ||| ||    
T  50156457 atttattaatctttcataaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaattttatgactat 50156556  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    |||||||||||||||||| |||||||||||| || ||||||||| ||  |||||||| |||||||||||| ||||||| ||||||||||    
T  50156557 ttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttaatatatagcattgctctt 50156645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 254 - 440
Target Start/End: Original strand, 44893092 - 44893280
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||||| |||||| || |||||||||||  ||| |||||||||||| | ||||||||||||  |||| ||    
T  44893092 atttattaatctttcataaaaaaaagatacataacacccaccatcccatgattttcggccaggctgagattttattggttaacattaatttcaggactat 44893191  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttg-aatctttcttgataaaatctttcttgatatatatcattgctct 440  Q
    |||||||||||||||||| |||||||||||| || |||||||||| ||| ||| |||| |||||||||||| ||||||| |||||||||    
T  44893192 ttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttttttgaaaaaatctttcttaatatatagcattgctct 44893280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 254 - 439
Target Start/End: Complemental strand, 36073137 - 36072947
Alignment:
Q  254 atttattaacctttcataaacaaaaa-----tacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttggga 348  Q
    ||||||||| |||||||||| |||||     ||||||||| ||||||||| ||||||| |||  ||  |||||||||||| | ||||||||||||  |||    
T  36073137 atttattaatctttcataaaaaaaaaaaagatacataacacccaccaccccatgatttccggccagactgagattttattggttaacattaatttcagga 36073038  T
Q  349 cgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    | |||||||||||||||||||| ||| |||||||| || ||||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  36073037 ctatttcttgataaaatctaagggtggttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 36072947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 254 - 440
Target Start/End: Complemental strand, 4751633 - 4751445
Alignment:
Q  254 atttattaacctttcataaacaa--aaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacga 351  Q
    ||||||||| |||||||||| ||  |||||||||||| ||||||||| ||||||| ||   ||  |||||||||||| | ||||||||||||  |||| |    
T  4751633 atttattaatctttcataaaaaagaaaatacataacacccaccaccccatgatttccgaccagactgagattttattggttaacattaatttcaggacta 4751534  T
Q  352 tttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctct 440  Q
    ||||||||||||||||||| ||| |||||||| || |||||||||| |  ||||||||||||||||||||||||||||| |||||||||    
T  4751533 tttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 4751445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 275 - 440
Target Start/End: Original strand, 33530590 - 33530754
Alignment:
Q  275 aaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtg 374  Q
    ||||| |||||||| ||||||||| ||||||| |||  ||| ||| |||||||| |||||||||| |||   ||| |||||||||||||||||||| |||    
T  33530590 aaaaaaacataacacccaccaccc-atgatttccggccaggctgaaattttattggctaacattagtttcaagactatttcttgataaaatctaagggtg 33530688  T
Q  375 attattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctct 440  Q
    ||||||||| || ||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  33530689 attattctgccatgtcattcttgaatttttcttgataaaatctttcttgatatatagcattgctct 33530754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 254 - 440
Target Start/End: Complemental strand, 53123217 - 53123029
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||| | |||| |||||||||| ||||||||| ||||||| |||  ||  |||||||||||| | ||||||||||||  |||| ||    
T  53123217 atttattaatctttcatacaaaaaagatacataacacccaccaccccatgatttccggccagactgagattttattggttaacattaatttcaggactat 53123118  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttc-ttgataaaatctttcttgatatatatcattgctct 440  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||  |||| |||| |||||||||||||||||||| |||||||||    
T  53123117 ttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttctttgaaaaaatctttcttgatatatagcattgctct 53123029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 230 - 440
Target Start/End: Original strand, 37934797 - 37935007
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttatta 329  Q
    |||||||||||| |||  ||||| |||||||||||||||||||| |||||||||||||| |||||| || || |||| ||   ||  ||||||||||||     
T  37934797 taatcacccttagatttcaatctcatttattaacctttcataaaaaaaaatacataacaaccaccatcccataatttccgaccagactgagattttattg 37934896  T
Q  330 gctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatat 429  Q
    | ||||||||||||  |||  |||||||||||||||||||| |||| ||||||  || |||||||||||   ||| |||||||||||||| |||||||||    
T  37934897 gttaacattaatttcaggataatttcttgataaaatctaagggtgagtattctaccatgtcattcttgacatttttttgataaaatcttttttgatatat 37934996  T
Q  430 atcattgctct 440  Q
    | |||||||||    
T  37934997 agcattgctct 37935007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 254 - 439
Target Start/End: Complemental strand, 2625023 - 2624837
Alignment:
Q  254 atttattaacctttcataaacaaaaa-tacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| ||||| ||||||||| ||||||| | ||||||| |||  ||  ||||||||||||   ||||||||||||   ||  ||    
T  2625023 atttattaatctttcataaaaaaaaaatacataacacccaccactccatgatttccggccagactgagattttattgattaacattaatttcatgattat 2624924  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    |||||||||||||||||| |||||||||||| ||  |||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  2624923 ttcttgataaaatctaagggtgattattctgccatttcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 2624837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 42671854 - 42671678
Alignment:
Q  254 atttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatt 353  Q
    |||| |||||||||| |||| ||||| ||||||||  || ||||| || |||| |||  |  ||||||||||||| | ||||||||||||| |||| |||    
T  42671854 atttgttaacctttcgtaaaaaaaaaaacataacactcatcaccccataatttccggccaaattgagattttattggttaacattaattttaggacaatt 42671755  T
Q  354 tcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatata 430  Q
    ||||||||||||||||| |||||||||||| || ||||||||| ||| ||| |||||||||||||| ||||||||||    
T  42671754 tcttgataaaatctaagggtgattattctgccatgtcattcttaaattttttttgataaaatctttattgatatata 42671678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 254 - 411
Target Start/End: Complemental strand, 9089056 - 9088898
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||| | |||| |||||||||| ||||||||| ||||||| |||  ||| |||||||||||| | ||||||||||||  |||| ||    
T  9089056 atttattaatctttcatacaaaaaagatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactat 9088957  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgata 411  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||  ||||||||||    
T  9088956 ttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgata 9088898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 275 - 441
Target Start/End: Complemental strand, 24392831 - 24392665
Alignment:
Q  275 aaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtg 374  Q
    |||||||||||||| ||| ||||| ||||||| |||   |   |||||||||||  |||||||||||||  | || ||||||||||||||| |||| |||    
T  24392831 aaaaatacataacacccatcaccccatgatttccggcccgacagagattttattgactaacattaatttcagtacaatttcttgataaaatttaagggtg 24392732  T
Q  375 attattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    ||||||||| || ||||||||||||| |||||||| |||||||||||||||||||| ||||||||||    
T  24392731 attattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcattgctctt 24392665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 254 - 426
Target Start/End: Original strand, 36073620 - 36073795
Alignment:
Q  254 atttattaacctttcat---aaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacg 350  Q
    |||||||||||||||||   ||| ||||| ||||||||  |||||||| ||||||| |||  |   |||||||||||| ||||| ||||||||| ||||     
T  36073620 atttattaacctttcattaaaaaaaaaaagacataacacgcaccaccccatgatttccggccaaactgagattttattggctaatattaattttaggaca 36073719  T
Q  351 atttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgata 426  Q
    ||||||| |||||||||||  ||||||||| ||||| ||||||||| |||||||||| ||||||||||||||||||    
T  36073720 atttcttcataaaatctaaaagtgattattttgtcatgtcattcttaaatctttcttcataaaatctttcttgata 36073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 254 - 399
Target Start/End: Complemental strand, 17655616 - 17655470
Alignment:
Q  254 atttattaacctttcataaacaaaaatacata--acatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacga 351  Q
    |||||||||||||||||||| |||||||||||  ||| ||| || || ||||||| |||  ||| |||||||||||| ||||||||||||||  |||| |    
T  17655616 atttattaacctttcataaa-aaaaatacatataacacccatcatcccatgatttccggccaggctgagattttattggctaacattaatttcaggacta 17655518  T
Q  352 tttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaa 399  Q
    ||||||||||||||||||| |||||||||||| || ||||||||||||    
T  17655517 tttcttgataaaatctaagggtgattattctgccatgtcattcttgaa 17655470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 250 - 411
Target Start/End: Complemental strand, 30563399 - 30563237
Alignment:
Q  250 tcttatttattaacctttcataaacaaaaa-tacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttggga 348  Q
    |||||||||||||||||||||||| ||||| ||||||||| ||||||||| ||||||| |||  ||| |||||||||||| || ||||||||||   |||    
T  30563399 tcttatttattaacctttcataaaaaaaaaatacataacacccaccaccccatgatttccggccaggctgagattttattggccaacattaattgcagga 30563300  T
Q  349 cgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgata 411  Q
      |||||||||||||||||||   ||| ||||||| |  |||||| |||||||||||||||||    
T  30563299 taatttcttgataaaatctaaagatgactattctgccgtgtcattgttgaatctttcttgata 30563237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 230 - 380
Target Start/End: Complemental strand, 37219841 - 37219684
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaacaa-------aaatacataacatccaccaccctatgattttcggttaggttgagat 322  Q
    |||||| ||||| |||  |||||||||||||||||||||||||| ||       |||||||||||||||| ||||| ||||||| |||  ||  ||||||    
T  37219841 taatcatccttagatttcaatcttatttattaacctttcataaaaaataaaaaaaaatacataacatccatcacccaatgatttccggccagactgagat 37219742  T
Q  323 tttattagctaacattaattttgggacgatttcttgataaaatctaagtgtgattatt 380  Q
    ||||||  |||||||||||||  |||| ||||||||||||||| |||| |||||||||    
T  37219741 tttattgactaacattaatttcaggacaatttcttgataaaatttaagagtgattatt 37219684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 250 - 422
Target Start/End: Complemental strand, 44744622 - 44744452
Alignment:
Q  250 tcttatttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggac 349  Q
    |||||||||||||||| | | ||| |||||||||||||| ||||||||||||||||| |||  ||  ||| |||||||   ||||||| |||||  ||||    
T  44744622 tcttatttattaacctat-acaaaaaaaaatacataacacccaccaccctatgatttccggccagactga-attttatcgactaacatcaatttcaggac 44744525  T
Q  350 gatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttctt 422  Q
     |||| |||||||||| |||| |||||||||||  || |||||| || ||| |||||| ||||||||||||||    
T  44744524 aattttttgataaaatttaagggtgattattctaccatgtcatttttaaatatttcttaataaaatctttctt 44744452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 42671862 - 42671927
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    |||||||||  |||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  42671862 aaatctaagaatgattattatgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 42671927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 363 - 427
Target Start/End: Complemental strand, 11314122 - 11314058
Alignment:
Q  363 aatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    |||||||| ||||||||| ||||| |||||||||| |||||||||||||||||| ||||||||||    
T  11314122 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatat 11314058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 365 - 427
Target Start/End: Complemental strand, 25063443 - 25063381
Alignment:
Q  365 tctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    |||||| |||||||||||  || ||||||||||||||||||||||||||||| ||||||||||    
T  25063443 tctaagagtgattattctaccatgtcattcttgaatctttcttgataaaatcattcttgatat 25063381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 21802191 - 21802127
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||    
T  21802191 aaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 21802127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 411
Target Start/End: Original strand, 30563403 - 30563452
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgata 411  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  30563403 aaatctaagtgtgattattgtgtcatgtcattcttgaatctttcttgata 30563452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 37219825 - 37219890
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    |||||||||  ||||||||||| || ||||||||| ||||||||||||||||||| ||||||||||    
T  37219825 aaatctaaggatgattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatat 37219890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 395
Target Start/End: Original strand, 11314184 - 11314255
Alignment:
Q  324 ttattagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattct 395  Q
    ||||| ||||||||||||||  | || ||||||||||| ||||||||  |||||||||||||| ||||||||    
T  11314184 ttattggctaacattaatttcagaacaatttcttgatataatctaaggatgattattctgtcatgtcattct 11314255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 10442658 - 10442594
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || |||||||||||||||||||| |||||||| ||||||||||    
T  10442658 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 10442594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 17655624 - 17655689
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  || |||||| ||||| ||||||||| ||||||||||||||||||| ||||| ||||    
T  17655624 aaatctaaaggtaattattatgtcatgtcattcttaaatctttcttgataaaatcattcttaatat 17655689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 50156449 - 50156386
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||| ||||||||| ||||| ||||||||||||| |||||| |||||||| ||||||||||    
T  50156449 aaatctaag-gtgattattatgtcatgtcattcttgaatttttctt-ataaaatcattcttgatat 50156386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 367
Target Start/End: Complemental strand, 9111429 - 9111337
Alignment:
Q  275 aaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatct 367  Q
    |||||||||||  | ||| ||||| |||||||||||  |||| || |||||||| | |||| ||||||| | ||| |||||||||||||||||    
T  9111429 aaaaatacatataacccatcaccccatgattttcggccaggtagaaattttattggttaactttaatttcgagacaatttcttgataaaatct 9111337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 416
Target Start/End: Complemental strand, 36073333 - 36073279
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatc 416  Q
    ||||||||| || ||||||||| ||  |||||||| |||||||||||||||||||    
T  36073333 aaatctaagagtaattattctggcatatcattcttaaatctttcttgataaaatc 36073279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 416
Target Start/End: Complemental strand, 37934813 - 37934759
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatc 416  Q
    ||||||||| ||||||||| |||||  ||||| ||||||||||||| ||||||||    
T  37934813 aaatctaagggtgattattgtgtcatatcattattgaatctttcttaataaaatc 37934759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 7744983 - 7744919
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| ||  | |||||||||||||||||||| |||||||| ||||||||||    
T  7744983 aaatctaaaggtgattattgtgcaatgtcattcttgaatctttctt-ataaaatcattcttgatat 7744919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 36073543 - 36073607
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || ||||||||||||| |||||| |||||||| ||||||||||    
T  36073543 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 36073607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 46442038 - 46442102
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || ||||||||||||| |||||| |||||||| ||||||||||    
T  46442038 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 46442102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 1e-54; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 254 - 440
Target Start/End: Complemental strand, 42297537 - 42297352
Alignment:
Q  254 atttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatt 353  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| ||||||| |||| ||| |||||||||||| ||||||||||||||  | || |||    
T  42297537 atttattaacctttcataaa--aaaatacataacatccaccaccccatgatttccggtcaggctgagattttattggctaacattaatttcagaactatt 42297440  T
Q  354 tcttgataaaatctaagtgtgattattct-gtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctct 440  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||| ||  ||||||||||||||||||||||||||||| |||||||||    
T  42297439 tcttgataaaatctaagggtgattattctagtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 42297352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 230 - 443
Target Start/End: Complemental strand, 24343759 - 24343543
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaacaaaaa---tacataacatccaccaccctatgattttcggttaggttgagatttta 326  Q
    |||||||||||| |||  | |||||||||||||||||||| ||| |||||   ||||||||| ||||||||| |||||||||||| ||| ||||||||||    
T  24343759 taatcacccttagatttcagtcttatttattaacctttcaaaaaaaaaaaaaatacataacacccaccacccgatgattttcggtcaggatgagatttta 24343660  T
Q  327 ttagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgata 426  Q
    || |||||||||||||| || || |||||||||||||||||||| |||||||||||| ||  | | | |||||| ||||||||||||||||||||| |||    
T  24343659 ttggctaacattaatttcggaacaatttcttgataaaatctaagagtgattattctgccatattaattttgaatttttcttgataaaatctttcttaata 24343560  T
Q  427 tatatcattgctcttaa 443  Q
    |||| ||||||||||||    
T  24343559 tatagcattgctcttaa 24343543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 283 - 439
Target Start/End: Complemental strand, 6042040 - 6041884
Alignment:
Q  283 ataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattct 382  Q
    |||||| ||||||||| ||||||| |||| ||| |||||||||||| ||||||||||||||  |||| |||||||||||||||||||| |||||||||||    
T  6042040 ataacaaccaccaccccatgatttccggtcaggctgagattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattct 6041941  T
Q  383 gtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    |||| ||||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  6041940 gtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 6041884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 230 - 450
Target Start/End: Complemental strand, 33114004 - 33113782
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaacaaaaa--tacataacatccaccaccctatgattttcggttaggttgagattttat 327  Q
    |||||||| ||| |||  ||||| ||||||||| |||||||||| |||||  ||||||||| ||||||||| ||||||| |||  ||  ||| |||||||    
T  33114004 taatcacctttagatttcaatctcatttattaatctttcataaaaaaaaaaatacataacacccaccaccccatgatttccggccagactgaaattttat 33113905  T
Q  328 tagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    | ||||||||||||||  |||| |||||||||||||||||||| |||||||||||| || || |||||||||  |||||| |||||||||||||||||||    
T  33113904 tggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtaattcttgaaattttcttaataaaatctttcttgatat 33113805  T
Q  428 atatcattgctcttaataaaatg 450  Q
    ||| |||||||||||| ||||||    
T  33113804 atagcattgctcttaaaaaaatg 33113782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 230 - 441
Target Start/End: Complemental strand, 2754929 - 2754715
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaacaaaaa---tacataacatccaccaccctatgattttcggttaggttgagatttta 326  Q
    |||||||| |||||||  | ||| ||||||||| |||||||||| |||||   ||||||||| |||| |||| ||||||| |||| ||| ||||||||||    
T  2754929 taatcacctttaaatttcagtctcatttattaatctttcataaaaaaaaaaaatacataacacccactaccccatgatttccggtcaggctgagatttta 2754830  T
Q  327 ttagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgata 426  Q
    || | ||||||||||||  |||| |||||||||||||||||||  |||||||||||| || ||||||||| ||  |||||||||||||||||||||||||    
T  2754829 ttggttaacattaatttcaggactatttcttgataaaatctaaaggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgata 2754730  T
Q  427 tatatcattgctctt 441  Q
    |||| ||||||||||    
T  2754729 tatagcattgctctt 2754715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 254 - 442
Target Start/End: Original strand, 3574405 - 3574595
Alignment:
Q  254 atttattaacctttcataaacaaaaa-tacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgg-gacga 351  Q
    ||||||||| |||||||||| ||||| ||||||||| ||||||||| ||||||| |||  | | |||||||||||| |||||||||||||||   ||| |    
T  3574405 atttattaatctttcataaaaaaaaaatacataacacccaccaccccatgatttccggccaagctgagattttattggctaacattaattttcaagacta 3574504  T
Q  352 tttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctta 442  Q
    ||||||||||||||||||| |||||||||||| || ||||||||| ||  ||||||||||||||||||||||||||||| |||||||||||    
T  3574505 tttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctta 3574595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 230 - 439
Target Start/End: Complemental strand, 33145922 - 33145713
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaacaaaaa-tacataacatccaccaccctatgattttcggttaggttgagattttatt 328  Q
    |||||||||||| |||  | |||||||||||||||||||||||| ||||| |||||| || ||||||||  || |||| |||| ||| ||||||||||||    
T  33145922 taatcacccttagatttcagtcttatttattaacctttcataaaaaaaaaatacataccacccaccacctcataatttccggtcaggctgagattttatt 33145823  T
Q  329 agctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatata 428  Q
     ||||||||||||||  |||| |||||||||||||||||||| |||||||||||| || ||||||||| ||  ||| || ||||||||||||||||||||    
T  33145822 ggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattctt-aaaattttttaataaaatctttcttgatata 33145724  T
Q  429 tatcattgctc 439  Q
    || ||||||||    
T  33145723 tagcattgctc 33145713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 254 - 439
Target Start/End: Original strand, 37216932 - 37217118
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||||| ||||||||||||||||||| |  ||| |||||||||||| | ||||||||||||   ||| ||    
T  37216932 atttattaatctttcataaaaaaaaaatacataacacccaccaccctatgattttcagcaaggctgagattttattggttaacattaatttcatgactat 37217031  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    ||||||||||||| |||| |||||||||||| || ||||||||| ||  ||||||||||||||||||||||||||||| ||||||||    
T  37217032 ttcttgataaaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 37217118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 254 - 440
Target Start/End: Original strand, 22426224 - 22426410
Alignment:
Q  254 atttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatt 353  Q
    ||||||||| |||||||||| |||||||||||||| ||||||||| ||||||| |||  ||  ||| |||||||| ||||||||||||||   ||| |||    
T  22426224 atttattaatctttcataaaaaaaaatacataacacccaccaccccatgatttccggccagactgaaattttattggctaacattaatttcaagactatt 22426323  T
Q  354 tcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctct 440  Q
    ||||||||||||||||| |||||||||||| || |||||| || ||  ||||||||||||||||||||| ||||||| |||||||||    
T  22426324 tcttgataaaatctaagggtgattattctgccatgtcatttttaaaattttcttgataaaatctttcttaatatataacattgctct 22426410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 254 - 441
Target Start/End: Original strand, 3137293 - 3137481
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||| | |||| |||||||||| ||| ||||| ||||||| |||  ||| |||||||||||| | ||||||||||||  |||| ||    
T  3137293 atttattaatctttcatacaaaaaagatacataacacccatcaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactat 3137392  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    |||||||||||||||||| ||||||||| || || ||||||||||||  |||||||| |||||||||||||||||||| ||||||||||    
T  3137393 ttcttgataaaatctaagggtgattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 3137481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 230 - 441
Target Start/End: Complemental strand, 33839745 - 33839529
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaa-----caaaaatacataacatccaccaccctatgattttcggttaggttgagattt 324  Q
    ||||||||||||||||  | ||| ||||||||||||||||||||      |||||||||||||| | ||||||| ||||||| |||  || |||||||||    
T  33839745 taatcacccttaaatttcagtctcatttattaacctttcataaaaaaagaaaaaatacataacacctaccaccccatgatttacggccagattgagattt 33839646  T
Q  325 tattagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttga 424  Q
    |||| ||||||||||||||    || |||||||||||||||||||  ||||||||||||||| || |||||| ||| ||| ||||||||||||||||| |    
T  33839645 tattggctaacattaatttcaaaacaatttcttgataaaatctaatggtgattattctgtcatgttattcttaaattttttttgataaaatctttcttaa 33839546  T
Q  425 tatatatcattgctctt 441  Q
    |||||| ||||||||||    
T  33839545 tatataacattgctctt 33839529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 254 - 439
Target Start/End: Complemental strand, 3456250 - 3456064
Alignment:
Q  254 atttattaacctttcataaacaaaaa-tacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| ||||| ||||||||| ||||||||| ||||||| |||  ||  |||||||||||| | |||||||||||   |||| ||    
T  3456250 atttattaatctttcataaaaaaaaaatacataacacccaccaccccatgatttccggccagactgagattttattggttaacattaattccaggactat 3456151  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    |||||||||||||||||| |||||||||||| ||  |||||||| ||  ||||||||||||||||||||||||||||| ||||||||    
T  3456150 ttcttgataaaatctaagggtgattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 3456064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 254 - 441
Target Start/End: Complemental strand, 37522239 - 37522051
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||||| ||||||||| || |||| |||  |||||||||||||||| | ||||||||||||   ||| ||    
T  37522239 atttattaatctttcataaaaaaaagatacataacacccaccaccccataatttccggccaggttgagattttattggttaacattaatttcatgactat 37522140  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    ||||| ||||||||| || ||||||||||||||| ||||||||| ||  |||||||| ||||||||||||||||||||  |||||||||    
T  37522139 ttctttataaaatcttagggtgattattctgtcatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagtattgctctt 37522051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 275 - 439
Target Start/End: Complemental strand, 48161069 - 48160905
Alignment:
Q  275 aaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtg 374  Q
    |||||||||||||| ||||||||| ||| ||| ||| |||| |||||||||||| ||||| ||||||||   ||| |||||||||||||||||||| |||    
T  48161069 aaaaatacataacacccaccaccccatggtttccggctaggctgagattttattggctaatattaatttcaagactatttcttgataaaatctaagggtg 48160970  T
Q  375 attattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    ||||||||| ||  |||||||| ||  ||||||||||||||||||||||||||||| ||||||||    
T  48160969 attattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 48160905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 254 - 439
Target Start/End: Original strand, 19650779 - 19650965
Alignment:
Q  254 atttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgg-gacgat 352  Q
    ||||||||| |||||||||| |||||||||||||| ||||||||| ||||||| |||  | | |||||||||||  |||||||||||||||   |||  |    
T  19650779 atttattaatctttcataaaaaaaaatacataacacccaccaccccatgatttccggccaagctgagattttatcggctaacattaattttcaagactgt 19650878  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    |||||||||||||||||  |||||||||||| || ||||||||| ||  ||||||||||||||||||||| ||||||| ||||||||    
T  19650879 ttcttgataaaatctaatggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttaatatataacattgctc 19650965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 277 - 439
Target Start/End: Complemental strand, 30385173 - 30385011
Alignment:
Q  277 aaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtgat 376  Q
    |||||||||||| ||||||||| ||||||| |||  ||| |||||||||||| | ||||||||||||  |||| ||||||||||||||| |||| |||||    
T  30385173 aaatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatataagggtgat 30385074  T
Q  377 tattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    ||||||| || |||||| |||||  ||||||||||||||||||||||||| ||| ||||||||    
T  30385073 tattctgccatgtcatttttgaaattttcttgataaaatctttcttgataaatagcattgctc 30385011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 275 - 438
Target Start/End: Original strand, 9796930 - 9797093
Alignment:
Q  275 aaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtg 374  Q
    |||||||||||| | ||||||||| |||||||||||   |   ||||||||||| ||||||||||||||  | || |||||||||||||||||||  |||    
T  9796930 aaaaatacataagacccaccaccccatgattttcggcccgacagagattttattggctaacattaatttaagtacaatttcttgataaaatctaatggtg 9797029  T
Q  375 attattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgct 438  Q
    ||||||||| || ||||||||||||| |||||||| |||||||||||||||||||| |||||||    
T  9797030 attattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatataacattgct 9797093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 269 - 427
Target Start/End: Complemental strand, 47738275 - 47738117
Alignment:
Q  269 ataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatcta 368  Q
    ||||| |||||||||||||| ||||||||| |||||||  ||| ||| |||||||||||| ||||||||||||||  |||| |||| || ||||||||||    
T  47738275 ataaaaaaaaatacataacacccaccaccccatgatttctggtcaggctgagattttattggctaacattaatttcaggacaatttttttataaaatcta 47738176  T
Q  369 agtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    |  || ||||||||| ||  |||||||||||| ||||||||||||||||||||||||||    
T  47738175 aaggtaattattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 248 - 441
Target Start/End: Complemental strand, 11347461 - 11347266
Alignment:
Q  248 aatcttatttattaacctttcataaacaaaaa--tacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttg 345  Q
    ||||| |||||||||  ||||||||| |||||  ||||||||| ||||||||| |||||||   |  |   |||||||||||| ||||||||||||||      
T  11347461 aatctcatttattaatttttcataaaaaaaaaaatacataacacccaccaccccatgatttctagccactctgagattttattggctaacattaatttca 11347362  T
Q  346 ggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    |||| ||||| |||||||||||||| || ||||||||| || ||||||||| ||  ||||||||||||||||||||||||||||| ||||||||||    
T  11347361 ggactatttcctgataaaatctaagggttattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 11347266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 290 - 441
Target Start/End: Original strand, 34482826 - 34482977
Alignment:
Q  290 ccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgt 389  Q
    ||||||||| ||||||| |||  ||| |||||||||||| | ||||||||||||  |||| |||||||||||||||||||| |||||||||||  ||  |    
T  34482826 ccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctaccatat 34482925  T
Q  390 cattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    ||||||||||  |||||||| |||||||||||||||||||| ||||||||||    
T  34482926 cattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 34482977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 254 - 383
Target Start/End: Complemental strand, 42298048 - 42297920
Alignment:
Q  254 atttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatt 353  Q
    |||||||||||||||||||| |||||||||||||||| ||||||| ||||||| |||  ||  |||||||||||| ||||||||||||||  |||| |||    
T  42298048 atttattaacctttcataaa-aaaaatacataacatctaccaccccatgatttccggccagactgagattttattggctaacattaatttcaggactatt 42297950  T
Q  354 tcttgataaaatctaagtgtgattattctg 383  Q
    ||||||||||||||||| ||||||||||||    
T  42297949 tcttgataaaatctaagggtgattattctg 42297920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 254 - 439
Target Start/End: Original strand, 8320461 - 8320649
Alignment:
Q  254 atttattaacctttcataaacaaaaa--tacataacatccaccaccct-atgattttcggttaggttgagattttattagctaacattaattttgggacg 350  Q
    ||||||||| |||||||||| |||||  ||||||||| |||| ||||  |||||||  ||  ||| |||||||||||| ||||||||||||||   |||     
T  8320461 atttattaatctttcataaaaaaaaaaatacataacacccactacccccatgatttctggccaggctgagattttattggctaacattaatttcaagact 8320560  T
Q  351 atttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    ||||||||||||||| |||| ||||||||| || ||  |||||||| ||  ||||||||||||||||||||||||||||| ||||||||    
T  8320561 atttcttgataaaatttaagggtgattattttgccatatcattcttaaaattttcttgataaaatctttcttgatatataacattgctc 8320649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 250 - 411
Target Start/End: Original strand, 41883097 - 41883260
Alignment:
Q  250 tcttatttattaacctttcataaacaaaaa--tacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttggg 347  Q
    |||||||||| ||||||| ||||| |||||  ||||||||| ||||||||| |||||||   |  ||  ||||||||||||  ||||||||||||| |||    
T  41883097 tcttatttatcaaccttttataaaaaaaaaaatacataacacccaccaccccatgatttctagccagtctgagattttattgactaacattaatttcggg 41883196  T
Q  348 acgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgata 411  Q
    || ||||||||||||||| |||| |||||||||||| || ||||||||||||| ||||||||||    
T  41883197 acaatttcttgataaaatttaagggtgattattctgccatgtcattcttgaatttttcttgata 41883260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 275 - 439
Target Start/End: Original strand, 8361946 - 8362110
Alignment:
Q  275 aaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtg 374  Q
    |||||||||| ||| ||||||||| ||||||| |||   |   ||||||||||| ||||||||||||||  | || |||||||||||||||||||| |||    
T  8361946 aaaaatacatgacacccaccaccccatgatttccggcccgacagagattttattggctaacattaatttcagtacaatttcttgataaaatctaagggtg 8362045  T
Q  375 attattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    ||||||||| || ||||||||||||| |||||||| |   | |||||||||||||| ||||||||    
T  8362046 attattctgccatgtcattcttgaatttttcttgaaattttttttcttgatatatagcattgctc 8362110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 230 - 440
Target Start/End: Original strand, 36864888 - 36865093
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttatta 329  Q
    |||||||||||| |||  | ||| |||||||||| ||||||| | |||||||||||||| |||||| || ||||||| |||      ||||||| ||||     
T  36864888 taatcacccttagatttcagtctcatttattaacatttcatata-aaaaatacataacacccaccatcccatgatttccggcc----tgagattctattg 36864982  T
Q  330 gctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatat 429  Q
    ||||||||||||||  |||| |||| ||||||||| ||||| |||||||||||  || ||||||||| ||  |||||| |||||||||| ||| ||||||    
T  36864983 gctaacattaatttcaggactattttttgataaaacctaagggtgattattctaccatgtcattcttaaaattttcttaataaaatcttccttaatatat 36865082  T
Q  430 atcattgctct 440  Q
    | |||||||||    
T  36865083 agcattgctct 36865093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 276 - 367
Target Start/End: Complemental strand, 40327988 - 40327897
Alignment:
Q  276 aaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatct 367  Q
    ||||||||||||| ||||||||||||||||| |||  |||||||||||||||| ||||||||||||||  |||| |||||||||||||||||    
T  40327988 aaaatacataacacccaccaccctatgatttccggccaggttgagattttattggctaacattaatttcaggacaatttcttgataaaatct 40327897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 254 - 396
Target Start/End: Complemental strand, 3089605 - 3089460
Alignment:
Q  254 atttattaacctttcataaacaaaaata---cataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacg 350  Q
    ||||||||| |||||||||| |||||||   |||| || ||||||||| ||||||| |||  | | |||||||||||| ||||||||||||||   ||      
T  3089605 atttattaatctttcataaaaaaaaataatacatagcacccaccaccccatgatttccggccaagctgagattttattggctaacattaatttcaagaat 3089506  T
Q  351 atttcttgataaaatctaagtgtgattattctgtcacgtcattctt 396  Q
    |||||||||||||||||||| |||||||||||| || |||||||||    
T  3089505 atttcttgataaaatctaagggtgattattctgccatgtcattctt 3089460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 308 - 428
Target Start/End: Complemental strand, 42921274 - 42921154
Alignment:
Q  308 cggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttctt 407  Q
    |||| ||| |||||||||||| ||||||||||| ||  |||| |||||||||||||||||||  |  || |||| |||| ||||||||| ||  ||||||    
T  42921274 cggtaaggctgagattttattggctaacattaaattcaggacaatttcttgataaaatctaaaggcaatcattcggtcatgtcattcttaaaattttctt 42921175  T
Q  408 gataaaatctttcttgatata 428  Q
    |||||||||||||||||||||    
T  42921174 gataaaatctttcttgatata 42921154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 40328025 - 40328090
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  40328025 aaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 40328090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 439
Target Start/End: Complemental strand, 41224354 - 41224233
Alignment:
Q  318 gagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatct 417  Q
    ||||||||||||||||||||||||||    || ||||||| |||||||  ||| ||||| |||||  || ||||||||||||| |||||||| |||||||    
T  41224354 gagattttattagctaacattaatttcaatacaatttcttaataaaattcaagggtgataattctaccatgtcattcttgaatttttcttgagaaaatct 41224255  T
Q  418 ttcttgatatatatcattgctc 439  Q
    ||||| ||||||| || |||||    
T  41224254 ttcttaatatatagcagtgctc 41224233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 362 - 430
Target Start/End: Original strand, 33839729 - 33839797
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatata 430  Q
    |||| |||| ||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  33839729 aaatttaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatata 33839797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 36864904 - 36864839
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  36864904 aaatctaagggtgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcttgatat 36864839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 33145906 - 33145970
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||    
T  33145906 aaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 33145970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 47738305 - 47738370
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    |||||||||  |||||||| || || ||||||||||||||||||||||||||||| ||||||||||    
T  47738305 aaatctaaggatgattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatat 47738370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 334 - 440
Target Start/End: Complemental strand, 26612890 - 26612784
Alignment:
Q  334 acattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatca 433  Q
    ||||||||||  |||| |||| || |||||||||||   || |||||||| || ||||||||||||| ||| || ||||||||||| ||||||||||  |    
T  26612890 acattaatttaaggactattttttaataaaatctaaaaatggttattctgccatgtcattcttgaatttttttttataaaatcttttttgatatataata 26612791  T
Q  434 ttgctct 440  Q
    |||||||    
T  26612790 ttgctct 26612784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 8361910 - 8361846
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||| ||||||||| ||||| ||||||||||||| ||||||||| ||||| ||||||||||    
T  8361910 aaatctaagggtgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatat 8361846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 9796900 - 9796836
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||| ||||||||| || || ||||||||||||||||||||||| ||||| ||||||||||    
T  9796900 aaatctaagagtgattattgtgacatgtcattcttgaatctttcttgat-aaatcattcttgatat 9796836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 22426216 - 22426152
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    |||||||| |||||||||| || || |||||||||||||||||||| |||||||| ||||||||||    
T  22426216 aaatctaaatgtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 22426152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 24343743 - 24343808
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||| ||||||||  | ||| ||||||||||||||||| ||||||||||| ||||||||||    
T  24343743 aaatctaagggtgattatcatatcatgtcattcttgaatcttttttgataaaatcattcttgatat 24343808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 427
Target Start/End: Original strand, 46919098 - 46919153
Alignment:
Q  372 gtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    |||||||||||| || |||||| |||||||||| ||||||||||| ||||||||||    
T  46919098 gtgattattctgccatgtcattattgaatcttttttgataaaatcattcttgatat 46919153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 407
Target Start/End: Complemental strand, 46919020 - 46918934
Alignment:
Q  321 attttattagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttctt 407  Q
    |||||||| |||||||||||||| | ||| |||||||||||||||||||  || |||||||| |||  ||||| || ||| ||||||    
T  46919020 attttatttgctaacattaatttcgagacaatttcttgataaaatctaaaggtaattattctatcatatcatttttaaatatttctt 46918934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 26612940 - 26613005
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||| ||||||||| || || || ||||||||||||||||| |||||||| || |||||||    
T  26612940 aaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatat 26613005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 30385594 - 30385658
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || |||||||||||||||||||| |||||||| ||||||||||    
T  30385594 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 30385658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 33113988 - 33114052
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || |||||||||||||||||||| |||||||| ||||||||||    
T  33113988 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 33114052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 26612956 - 26612891
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaacaaaaatacataacatccaccacc 297  Q
    |||||||||||| |||  | ||| |||||||||||||||||||  |||||||||||||| ||||||||    
T  26612956 taatcacccttagatttcagtctcatttattaacctttcataa--aaaaatacataacacccaccacc 26612891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 30385586 - 30385534
Alignment:
Q  254 atttattaacctttcataaacaaaaatacataacatccaccaccctatgattt 306  Q
    ||||||||| |||||||||| | |||||||||||| ||||||||| |||||||    
T  30385586 atttattaatctttcataaaaataaatacataacacccaccaccccatgattt 30385534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 3456269 - 3456322
Alignment:
Q  373 tgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    |||||| | ||||| |||||||||||||||||||| |||||||| ||||||||||    
T  3456269 tgattagtgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 3456322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 436
Target Start/End: Complemental strand, 40327912 - 40327878
Alignment:
Q  402 tttcttgataaaatctttcttgatatatatcattg 436  Q
    ||||||||||||||||||||||||||||| |||||    
T  40327912 tttcttgataaaatctttcttgatatatagcattg 40327878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 442
Target Start/End: Original strand, 47402630 - 47402664
Alignment:
Q  408 gataaaatctttcttgatatatatcattgctctta 442  Q
    ||||||||||||||||||||||| |||||||||||    
T  47402630 gataaaatctttcttgatatatagcattgctctta 47402664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 3137285 - 3137221
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || ||||||||||||| |||||| |||||||| ||||||||||    
T  3137285 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 3137221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 8320453 - 8320389
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || |||||||||||||||||||| |||||||| || |||||||    
T  8320453 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattattgatat 8320389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 34482759 - 34482695
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || ||||||||||||| |||||| |||||||| ||||||||||    
T  34482759 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 34482695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 37216924 - 37216860
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| |  || |||||||||||||||||||| |||||||| ||||||||||    
T  37216924 aaatctaaaggtgattattgtaccatgtcattcttgaatctttctt-ataaaatcattcttgatat 37216860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 41224428 - 41224492
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    |||| |||| ||||||||| || || ||||||||||||| ||||||||| ||||| ||||||||||    
T  41224428 aaatttaagggtgattattgtgccatgtcattcttgaatatttcttgat-aaatcattcttgatat 41224492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 286
Target Start/End: Complemental strand, 42921334 - 42921278
Alignment:
Q  231 aatcacccttaaattgaaatcttatttattaacctttcat-aaacaaaaatacataa 286  Q
    |||||||||||||||  | ||| ||||||||||||||||| ||| ||||||||||||    
T  42921334 aatcacccttaaatttcagtctcatttattaacctttcataaaaaaaaaatacataa 42921278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 108; Significance: 5e-54; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 254 - 441
Target Start/End: Complemental strand, 41196 - 41009
Alignment:
Q  254 atttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatt 353  Q
    ||||||||| |||||||||| |||||||||||||| ||||||||| ||||||| |||  ||| |||||||||||| ||||||||||||||   ||| |||    
T  41196 atttattaatctttcataaaaaaaaatacataacacccaccaccccatgatttccggccaggctgagattttattggctaacattaatttcaagactatt 41097  T
Q  354 tcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||  ||| ||||||||||||||||||||||||| ||||||||||    
T  41096 tcttgataaaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctctt 41009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 1e-51; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 229 - 441
Target Start/End: Original strand, 27523110 - 27523324
Alignment:
Q  229 ttaatcacccttaaattgaaatcttatttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttatt 328  Q
    ||||||||||||  |||  | |||||||||||||| ||||||||| |||||||||||||| ||| ||||| ||||||| |||  ||| ||||||||||||    
T  27523110 ttaatcaccctttgattttagtcttatttattaacttttcataaaaaaaaatacataacacccatcaccccatgatttccggccaggatgagattttatt 27523209  T
Q  329 agctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttga--ta 426  Q
     |||||||||||||| ||||| ||||||||||||||| |||| ||||||||||||||| ||||||||| ||| ||||||||||||||  |||||||  ||    
T  27523210 ggctaacattaatttcgggacaatttcttgataaaatttaagggtgattattctgtcatgtcattcttaaatttttcttgataaaattgttcttgatgta 27523309  T
Q  427 tatatcattgctctt 441  Q
    |||| ||||||||||    
T  27523310 tatagcattgctctt 27523324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 254 - 439
Target Start/End: Complemental strand, 44094883 - 44094698
Alignment:
Q  254 atttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatt 353  Q
    ||||||||| |||||||||| |||||||||||||| ||||||||| ||||||| |||  ||  |||||||||||| ||||||||||||||  |||  |||    
T  44094883 atttattaatctttcataaagaaaaatacataacacccaccaccccatgatttccggccagactgagattttattggctaacattaatttcaggattatt 44094784  T
Q  354 tcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||  |||||||||||||| |||||||||||||| ||||||||    
T  44094783 tcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcattgctc 44094698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 230 - 441
Target Start/End: Complemental strand, 25463886 - 25463674
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaacaaaaa-tacataacatccaccaccctatgattttcggttaggttgagattttatt 328  Q
    |||||||| ||| ||| || ||| ||||||||| |||||||||| ||||| ||||||||| ||||||||| ||||||| |||  ||| ||||||||||||    
T  25463886 taatcacctttagatttaagtctcatttattaatctttcataaaaaaaaaatacataacacccaccaccccatgatttccggccaggctgagattttatt 25463787  T
Q  329 agctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatata 428  Q
     ||||||||||||||   ||| |||||||||||||||||||| |||||||||||| || ||||||||| ||  |||||| ||||||||||||||||||||    
T  25463786 ggctaacattaatttcaagactatttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatata 25463687  T
Q  429 tatcattgctctt 441  Q
    || ||||||||||    
T  25463686 tagcattgctctt 25463674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 254 - 439
Target Start/End: Complemental strand, 40215174 - 40214988
Alignment:
Q  254 atttattaacctttcataaacaaaaa-tacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    |||||||||  ||||||||| ||||| ||||||||| ||||||||| ||||||| |||  ||| |||||||||||| ||||||||||||||   ||| ||    
T  40215174 atttattaatatttcataaaaaaaaaatacataacacccaccaccccatgatttccggccaggctgagattttattggctaacattaatttcaagactat 40215075  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  40215074 ttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 40214988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 254 - 445
Target Start/End: Complemental strand, 19015590 - 19015398
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||| | |||| |||||||||| ||||||||| ||||||| |||  ||| |||||||||||| | ||||||||||||  |||| ||    
T  19015590 atttattaatctttcatacaaaaaagatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactat 19015491  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctcttaata 445  Q
    |||||||||||||||||| |||||||||||| ||  |||||||||||  |||||||| |||||||||||||||||||| ||||||||||||||    
T  19015490 ttcttgataaaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctcttaata 19015398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 254 - 439
Target Start/End: Original strand, 37821713 - 37821899
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||||| ||| ||||| |||||||||||  ||| |||||||||||| | ||||||||||||  |||| ||    
T  37821713 atttattaatctttcataaaaaaaagatacataacacccaacaccccatgattttcggccaggctgagattttattggttaacattaatttcaggactat 37821812  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    |||||||||||||||||| |||||||||||| ||  |||||||||||  |||||||| |||||||||||||||||||| ||||||||    
T  37821813 ttcttgataaaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 37821899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 254 - 448
Target Start/End: Complemental strand, 6883673 - 6883478
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||||| ||||||||| ||||||| |||  ||| |||||||||||| | ||||||||||||  |||| ||    
T  6883673 atttattaatctttcataaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactat 6883574  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctcttaataaaa 448  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||  |||||| | |||||||||||| ||||||| |||||||| ||| ||||    
T  6883573 ttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttaaaaaaatctttcttaatatatagcattgctcataaaaaaa 6883478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 230 - 442
Target Start/End: Complemental strand, 25973617 - 25973411
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttatta 329  Q
    |||||||| |||||||  | ||| ||||||||| |||||||||| |||||||||||||| ||||||||| |||||||||||  ||    ||||||||||     
T  25973617 taatcacctttaaatttcagtctcatttattaatctttcataaa-aaaaatacataacacccaccaccccatgattttcggccag----agattttattg 25973523  T
Q  330 gctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatat 429  Q
    ||||||||||||||  |||  |||||||||||||||||||| |||||||||||| |  ||||||||||||  |||| |||||||||||||||||||||||    
T  25973522 gctaacattaatttcaggattatttcttgataaaatctaagggtgattattctg-cctgtcattcttgaaattttcatgataaaatctttcttgatatat 25973424  T
Q  430 atcattgctctta 442  Q
    | |||||||||||    
T  25973423 aacattgctctta 25973411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 254 - 440
Target Start/End: Original strand, 41876321 - 41876508
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||||| ||||||||| |||||||||||  ||| |||||||||||| | ||||||||||||  |||| ||    
T  41876321 atttattaatctttcataaaaaaaagatacataacacccaccaccccatgattttcggccaggctgagattttattggttaacattaatttcaggactat 41876420  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctct 440  Q
    |||||||||||| ||||| |||||||||||| || ||||||||| ||  ||| |||| |||||||||||||||||||| |||||||||    
T  41876421 ttcttgataaaacctaagggtgattattctgccatgtcattcttaaaatttttttgaaaaaatctttcttgatatatagcattgctct 41876508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 254 - 439
Target Start/End: Original strand, 36966587 - 36966773
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||||| ||||||||| ||||||| |||  ||  |||||||||||| | ||||||||||||  |||| ||    
T  36966587 atttattaatctttcataaaaaaaagatacataacacccaccaccccatgatttccggccagactgagattttattggttaacattaatttcaggactat 36966686  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    |||||||||||||||||| |||||||||||| ||  |||||||||||  |||||||| |||||||||||||||||||| ||||||||    
T  36966687 ttcttgataaaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 36966773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 254 - 441
Target Start/End: Complemental strand, 3559803 - 3559615
Alignment:
Q  254 atttattaacctttcataaacaaaaatacat-aacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||||||||| |||| ||||||||| ||||||| ||   ||| |||||||||||| ||||||||||||||   ||| ||    
T  3559803 atttattaatctttcataaaaaaaaatacattaacacccaccaccccatgatttccgcccaggctgagattttattggctaacattaatttcaagactat 3559704  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    ||||||||||||| |||| |||||||||||| || ||||||||| ||  ||| ||||||||||||||||||||||||| ||||| ||||    
T  3559703 ttcttgataaaatttaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcattgttctt 3559615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 275 - 439
Target Start/End: Original strand, 32000168 - 32000332
Alignment:
Q  275 aaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtg 374  Q
    |||||||||||||| ||||||||| ||||||| ||| | |    |||||||||| ||||||||||||||  | || |||||||||||||||||||| |||    
T  32000168 aaaaatacataacacccaccaccccatgatttccggctcgacatagattttattggctaacattaatttcagtacaatttcttgataaaatctaagggtg 32000267  T
Q  375 attattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
     ||||||||||| ||||||||||||| |||||||| |||||||||||||||||||| ||||||||    
T  32000268 gttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcattgctc 32000332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 275 - 441
Target Start/End: Complemental strand, 18404606 - 18404440
Alignment:
Q  275 aaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtg 374  Q
    |||||||||||||| ||||||||||||||||| ||   |   |||||||||||| ||||||||||||||  |||| |||||||||||||||||||  |||    
T  18404606 aaaaatacataacacccaccaccctatgatttccgaccaaactgagattttattggctaacattaatttcaggactatttcttgataaaatctaaaggtg 18404507  T
Q  375 attattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    ||||||||  || ||||||||| ||  ||||||||||||||||||||||||||||| ||||||||||    
T  18404506 attattctaccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 18404440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 277 - 439
Target Start/End: Original strand, 44690932 - 44691094
Alignment:
Q  277 aaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtgat 376  Q
    |||||||||||| ||| ||||| ||||||| |||  ||  |||||||||||| |||||||||||||||||||  |||||||||||||||||||| || ||    
T  44690932 aaatacataacacccaacaccccatgatttccggccagactgagattttattggctaacattaattttgggataatttcttgataaaatctaagagttat 44691031  T
Q  377 tattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    ||||||| || || |||||||||||||| || |||||||||||||||||||| | ||||||||    
T  44691032 tattctgccatgtaattcttgaatctttttttataaaatctttcttgatatacaacattgctc 44691094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 251 - 439
Target Start/End: Original strand, 9910167 - 9910358
Alignment:
Q  251 cttatttattaacctttcataaacaaaaa---tacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttggg 347  Q
    |||||||||||| |||||||||| |||||   | ||||||| ||||||||| ||||||| |||  |   |||||||||||| | ||||||||||||  ||    
T  9910167 cttatttattaatctttcataaaaaaaaaagatgcataacacccaccaccccatgatttccggccatactgagattttattggttaacattaatttcagg 9910266  T
Q  348 acgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    || ||||||||||||||||||||  ||||||||||| || ||||||||||||  |||||||| |||||||||||||||||||| ||||||||    
T  9910267 actatttcttgataaaatctaaggttgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 9910358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 278 - 441
Target Start/End: Complemental strand, 40273863 - 40273700
Alignment:
Q  278 aatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtgatt 377  Q
    ||||||||||| ||||||||| ||||||| |||   |   ||||||||||| ||||||||||||||  | || ||||||| |||||||||||| ||||||    
T  40273863 aatacataacacccaccaccccatgatttccggcccgacagagattttattggctaacattaatttcagtacaatttcttaataaaatctaagggtgatt 40273764  T
Q  378 attctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    ||| || || ||||||||||||| |||||||| ||||||||||||||||| || ||||||||||    
T  40273763 attttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcattgctctt 40273700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 254 - 383
Target Start/End: Complemental strand, 51737691 - 51737561
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||||| ||||||||| |||||||||||| ||| |||||||||||| | ||||||||||||  |||| ||    
T  51737691 atttattaatctttcataaaaaaaagatacataacacccaccaccccatgattttcggtcaggctgagattttattggttaacattaatttcaggactat 51737592  T
Q  353 ttcttgataaaatctaagtgtgattattctg 383  Q
    ||||||||||||| |||| ||||||||||||    
T  51737591 ttcttgataaaatttaagggtgattattctg 51737561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 322 - 441
Target Start/End: Original strand, 16045746 - 16045865
Alignment:
Q  322 ttttattagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttct 421  Q
    ||||||| ||||||||||||||   ||  |||||||||||||||||||| |||||||||||| || ||||||||||||  ||||||||||||||||||||    
T  16045746 ttttattggctaacattaatttcaagaatatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttct 16045845  T
Q  422 tgatatatatcattgctctt 441  Q
    ||||||||| |||| |||||    
T  16045846 tgatatatagcattactctt 16045865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 275 - 427
Target Start/End: Original strand, 33786536 - 33786687
Alignment:
Q  275 aaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtg 374  Q
    |||||| ||||||||||||||||| ||||||| |||   |   ||||||||||| ||||||||||||||  | || ||||||||||||||| |||| |||    
T  33786536 aaaaatgcataacatccaccaccccatgatttccggcccgacagagattttattggctaacattaatttcagtacaatttcttgataaaatttaagggtg 33786635  T
Q  375 attattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    |||||| || || ||||||||||||||||||||||| ||||| ||||||||||    
T  33786636 attattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatat 33786687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 323 - 440
Target Start/End: Complemental strand, 34519874 - 34519757
Alignment:
Q  323 tttattagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttctt 422  Q
    |||||| ||||||||||||||  |||| |||| |||||||||||||||   |||||||||   | | |||| ||||||||||||| ||||||||||||||    
T  34519874 tttattggctaacattaatttcaggacaattttttgataaaatctaaggtcgattattcttctatggcatttttgaatctttcttaataaaatctttctt 34519775  T
Q  423 gatatatatcattgctct 440  Q
    |||||||| |||||||||    
T  34519774 gatatatagcattgctct 34519757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 250 - 411
Target Start/End: Complemental strand, 10167589 - 10167428
Alignment:
Q  250 tcttatttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggac 349  Q
    |||||||||||||  ||||||||| ||||||||| ||||  |||||  | || |||| |||| ||    | |||||||| ||||||||||||||   |||    
T  10167589 tcttatttattaatttttcataaaaaaaaatacacaacacacaccaaaccataatttccggtcagaccaaaattttattggctaacattaatttaaagac 10167490  T
Q  350 gatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgata 411  Q
     |||| ||||||||||||||   |||||||||| ||| ||||||||| ||||||||||||||    
T  10167489 aattttttgataaaatctaaaaatgattattctatcatgtcattcttaaatctttcttgata 10167428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 363 - 427
Target Start/End: Complemental strand, 44690892 - 44690828
Alignment:
Q  363 aatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    |||||||| |||||||||||| || ||||||||||||||||||||||||||||| || |||||||    
T  44690892 aatctaagggtgattattctgccatgtcattcttgaatctttcttgataaaatcattattgatat 44690828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 275 - 366
Target Start/End: Original strand, 20305032 - 20305123
Alignment:
Q  275 aaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatttcttgataaaatc 366  Q
    |||||||||||||| |||||| || |||||||||||  | | |||||||||||| ||||||||||||||  |||  ||||||||||||||||    
T  20305032 aaaaatacataacacccaccatcccatgattttcggccaagctgagattttattggctaacattaatttcaggattatttcttgataaaatc 20305123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 235 - 367
Target Start/End: Complemental strand, 51621134 - 51621002
Alignment:
Q  235 acccttaaattgaaatcttatttattaacctttcataaac----aaaaatacataacatccaccaccctatgattttcggttaggttgagattttattag 330  Q
    |||||||||||  |||||||||||||||| ||| |||||     |||||||||||||||||||||||| ||||||| || |     ||||||||||||      
T  51621134 acccttaaatttcaatcttatttattaacgttttataaaataaaaaaaatacataacatccaccaccccatgatttccgat----ctgagattttattga 51621039  T
Q  331 ctaacattaattttgggacgatttcttgataaaatct 367  Q
    |||||||||||||  |||| ||||||| |||||||||    
T  51621038 ctaacattaatttctggactatttcttaataaaatct 51621002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 52064445 - 52064384
Alignment:
Q  366 ctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||| |||| |||||||||| ||||||||||||||||||||||||||||| || |||||||    
T  52064445 ctaagggtgaatattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatat 52064384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 230 - 325
Target Start/End: Original strand, 22157393 - 22157489
Alignment:
Q  230 taatcacccttaaattgaaatcttatttattaacctttcat-aaacaaaaatacataacatccaccaccctatgattttcggttaggttgagatttt 325  Q
    ||||||| ||||||||  |||||||||||||||| |||||| ||| |||||||||||||| | |||| || || ||||||||| |||||||| ||||    
T  22157393 taatcacacttaaatttcaatcttatttattaacatttcataaaagaaaaatacataacacctaccatcccataattttcggtcaggttgagttttt 22157489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 19722970 - 19722906
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||    
T  19722970 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 19722906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 32000137 - 32000073
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||| ||||||||| || || ||||||||||||||||||||||| ||||| ||||||||||    
T  32000137 aaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatat 32000073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 33786502 - 33786438
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||| ||||||||| || || ||||||||||||||||||||||| ||||| ||||||||||    
T  33786502 aaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatat 33786438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 435
Target Start/End: Complemental strand, 27523098 - 27523054
Alignment:
Q  391 attcttgaatctttcttgataaaatctttcttgatatatatcatt 435  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||    
T  27523098 attcttgaatctttcttgataaaatcattcttgatatataacatt 27523054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 20305001 - 20304937
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || |||||||||||||||||||| |||||||| ||||||||||    
T  20305001 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 20304937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 37821705 - 37821641
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| ||||| ||||||||||||| |||||| |||||||| ||||||||||    
T  37821705 aaatctaaaggtgattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatat 37821641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 40215182 - 40215246
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || |||||||||||||||||||| |||||||| ||||||||||    
T  40215182 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 40215246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 40273902 - 40273966
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||| ||||||||| || || ||||||||||||| ||||||||| ||||| ||||||||||    
T  40273902 aaatctaagggtgattattgtgccatgtcattcttgaatatttcttgat-aaatcattcttgatat 40273966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 427
Target Start/End: Original strand, 25973611 - 25973665
Alignment:
Q  372 gtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||| ||||| ||||||||||||| |||||| |||||||| ||||||||||    
T  25973611 gtgattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatat 25973665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 439
Target Start/End: Complemental strand, 52329358 - 52329319
Alignment:
Q  400 tctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  52329358 tctttcttgataaattctttcttgatatataacattgctc 52329319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 440
Target Start/End: Complemental strand, 51621017 - 51620979
Alignment:
Q  402 tttcttgataaaatctttcttgatatatatcattgctct 440  Q
    |||||| |||||||||||||||||||||| |||||||||    
T  51621017 tttcttaataaaatctttcttgatatatagcattgctct 51620979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 9910162 - 9910098
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || ||||||||||||| |||||| |||||||| ||||||||||    
T  9910162 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 9910098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 19015598 - 19015662
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || ||||||||||||| |||||| |||||||| ||||||||||    
T  19015598 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 19015662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 51737699 - 51737763
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || ||||||||||||| |||||| |||||||| ||||||||||    
T  51737699 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 51737763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 254 - 439
Target Start/End: Complemental strand, 11807 - 11621
Alignment:
Q  254 atttattaacctttcataaacaaaaa-tacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| ||||| |||||||||  |||||||| |||||||||||  ||| |||||||||||| | ||||||||||||   ||| ||    
T  11807 atttattaatctttcataaaaaaaaaatacataacactcaccaccccatgattttcggccaggctgagattttattggttaacattaatttcatgactat 11708  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  11707 ttcttgataaaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 11621  T

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Target: scaffold0085 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 254 - 439
Target Start/End: Complemental strand, 48035 - 47850
Alignment:
Q  254 atttattaacctttcataaacaaaaatacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgatt 353  Q
    ||||||||| |||||||||| | |||||||||||| ||||||||| ||||||| |||  ||| |||||||||||| | ||||||||||||  |||| |||    
T  48035 atttattaatctttcataaaaataaatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatt 47936  T
Q  354 tcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctc 439  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||  ||||||||||||||||||||||||| ||| ||||||||    
T  47935 tcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgataaatagcattgctc 47850  T

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Target: scaffold0471 (Bit Score: 101; Significance: 7e-50; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 254 - 441
Target Start/End: Complemental strand, 13028 - 12840
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||||||||||||||| ||||||| |||  ||| |||||||||||| | ||||||||||||  |||| ||    
T  13028 atttattaatctttcataaaaaaaagatacataacatccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactat 12929  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    ||||||||||||||||||  ||||||||||| || ||||||||||||  |||||||| |||||||||||||||||||| ||||||||||    
T  12928 ttcttgataaaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 12840  T

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Target: scaffold0204 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 254 - 441
Target Start/End: Complemental strand, 4582 - 4394
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| || | |||||||||| ||||||||| |||||||||||  ||| |||||||||||| | ||||||||||||  |||| ||    
T  4582 atttattaatctttcataaaaaacagatacataacacccaccaccccatgattttcggccaggctgagattttattggttaacattaatttcaggactat 4483  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgctctt 441  Q
    |||||||||||||||||| |||||||||||| || ||||||||| ||  |||||||| |||||||||||||||||||| ||||||||||    
T  4482 ttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctctt 4394  T

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Target: scaffold0665 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 254 - 438
Target Start/End: Complemental strand, 3249 - 3069
Alignment:
Q  254 atttattaacctttcataaacaaaaa-tacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| ||||| ||||||||| ||||||||||||||||||||| |     ||||||||||| ||||||||||||||   ||| ||    
T  3249 atttattaatctttcataaaaaaaaaatacataacacccaccaccctatgattttcggct-----gagattttattggctaacattaatttcaagactat 3155  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatatatatcattgct 438  Q
    |||||||||||||||||| |||||||||||| || ||||||||| ||  ||| ||||||||||||||||||||||||| |||||||    
T  3154 ttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcattgct 3069  T

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Target: scaffold0228 (Bit Score: 84; Significance: 1e-39; HSPs: 4)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 254 - 428
Target Start/End: Complemental strand, 8588 - 8413
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||||| |||||| || ||||||| |||  ||  |||||||||||| | ||||||||||||  | || ||    
T  8588 atttattaatctttcataaaaaaaagatacataacacccaccatcccatgatttccggccagcctgagattttattggttaacattaatttcagaactat 8489  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatata 428  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||  |||||||||||||||||||||||||||    
T  8488 ttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 8413  T

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Target: scaffold0228; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 254 - 428
Target Start/End: Complemental strand, 16170 - 15995
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||||| |||||| || ||||||| |||  ||  |||||||||||| | ||||||||||||  | || ||    
T  16170 atttattaatctttcataaaaaaaagatacataacacccaccatcccatgatttccggccagcctgagattttattggttaacattaatttcagaactat 16071  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatata 428  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||  |||||||||||||||||||||||||||    
T  16070 ttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 15995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 254 - 428
Target Start/End: Complemental strand, 26122 - 25947
Alignment:
Q  254 atttattaacctttcataaacaaaa-atacataacatccaccaccctatgattttcggttaggttgagattttattagctaacattaattttgggacgat 352  Q
    ||||||||| |||||||||| |||| |||||||||| |||||| || ||||||| |||  ||  |||||||||||| | ||||||||||||  | || ||    
T  26122 atttattaatctttcataaaaaaaagatacataacacccaccatcccatgatttccggccagcctgagattttattggttaacattaatttcagaactat 26023  T
Q  353 ttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatata 428  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||  |||||||||||||||||||||||||||    
T  26022 ttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 25947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 26130 - 26194
Alignment:
Q  362 aaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaaatctttcttgatat 427  Q
    ||||||||  ||||||||| || || ||||||||||||| |||||| |||||||| ||||||||||    
T  26130 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 26194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 319 - 413
Target Start/End: Complemental strand, 85546 - 85452
Alignment:
Q  319 agattttattagctaacattaattttgggacgatttcttgataaaatctaagtgtgattattctgtcacgtcattcttgaatctttcttgataaa 413  Q
    |||||||||| ||||||||||||||  |||  ||||||| ||||||| ||||  ||||||||||| || ||||||||||| | ||||||||||||    
T  85546 agattttattggctaacattaatttcaggataatttcttcataaaatttaaggatgattattctgccatgtcattcttgagtttttcttgataaa 85452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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