View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4766-Insertion-12 (Length: 381)

Name: NF4766-Insertion-12
Description: NF4766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4766-Insertion-12
NF4766-Insertion-12
[»] chr5 (28 HSPs)
chr5 (228-294)||(34154843-34154909)
chr5 (229-294)||(8170013-8170078)
chr5 (229-294)||(32703463-32703528)
chr5 (229-293)||(7368437-7368501)
chr5 (235-295)||(24448937-24448997)
chr5 (234-326)||(41014364-41014450)
chr5 (234-294)||(43574652-43574712)
chr5 (234-319)||(19142953-19143032)
chr5 (234-294)||(2838824-2838884)
chr5 (235-326)||(35710358-35710443)
chr5 (234-326)||(38879627-38879715)
chr5 (234-294)||(4619133-4619195)
chr5 (234-294)||(13801796-13801858)
chr5 (234-316)||(16880660-16880736)
chr5 (239-293)||(1565483-1565537)
chr5 (237-295)||(20135653-20135713)
chr5 (234-288)||(43334249-43334305)
chr5 (234-294)||(7097789-7097849)
chr5 (234-294)||(22600500-22600560)
chr5 (248-326)||(16957374-16957446)
chr5 (234-294)||(27328798-27328860)
chr5 (237-293)||(29334444-29334501)
chr5 (234-301)||(41425994-41426061)
chr5 (245-294)||(1405244-1405293)
chr5 (234-283)||(3771385-3771434)
chr5 (239-295)||(12477148-12477205)
chr5 (238-289)||(11657733-11657785)
chr5 (234-279)||(42924876-42924923)
[»] chr6 (14 HSPs)
chr6 (229-294)||(25557764-25557829)
chr6 (229-294)||(1347003-1347068)
chr6 (229-294)||(1354786-1354851)
chr6 (229-294)||(26097199-26097264)
chr6 (234-326)||(29355858-29355946)
chr6 (234-294)||(12221944-12222006)
chr6 (237-294)||(32579474-32579531)
chr6 (229-279)||(28007667-28007717)
chr6 (234-293)||(7947401-7947461)
chr6 (234-288)||(15866074-15866126)
chr6 (237-291)||(6024282-6024338)
chr6 (245-294)||(23930156-23930205)
chr6 (238-287)||(33138883-33138932)
chr6 (234-274)||(1941901-1941941)
[»] chr4 (48 HSPs)
chr4 (229-295)||(9832341-9832407)
chr4 (229-294)||(20225023-20225088)
chr4 (229-294)||(29207927-29207992)
chr4 (234-326)||(30639425-30639511)
chr4 (234-295)||(47444003-47444064)
chr4 (234-326)||(5648304-5648390)
chr4 (229-294)||(11054177-11054242)
chr4 (229-294)||(48598854-48598919)
chr4 (234-294)||(17043423-17043483)
chr4 (229-293)||(47528560-47528624)
chr4 (230-293)||(5306694-5306757)
chr4 (234-294)||(6430655-6430715)
chr4 (235-326)||(25629096-25629181)
chr4 (239-294)||(10277786-10277841)
chr4 (234-326)||(20639661-20639748)
chr4 (237-326)||(40915877-40915960)
chr4 (234-326)||(8473623-8473711)
chr4 (230-288)||(16911604-16911664)
chr4 (230-287)||(47441566-47441623)
chr4 (237-294)||(49796846-49796903)
chr4 (237-294)||(51865067-51865124)
chr4 (234-294)||(7909310-7909370)
chr4 (234-326)||(16408604-16408692)
chr4 (234-326)||(20225120-20225208)
chr4 (234-326)||(23501833-23501921)
chr4 (234-294)||(30690205-30690265)
chr4 (240-294)||(25463174-25463228)
chr4 (234-294)||(54175109-54175171)
chr4 (239-294)||(54730301-54730358)
chr4 (237-293)||(3580870-3580926)
chr4 (234-293)||(30581495-30581555)
chr4 (234-294)||(55766495-55766555)
chr4 (235-294)||(9987863-9987922)
chr4 (235-294)||(14983881-14983940)
chr4 (237-294)||(20908665-20908723)
chr4 (234-288)||(35567216-35567270)
chr4 (252-294)||(38786673-38786715)
chr4 (285-326)||(17315337-17315378)
chr4 (234-294)||(55830750-55830810)
chr4 (234-293)||(19027894-19027953)
chr4 (235-326)||(21647011-21647098)
chr4 (230-293)||(41018824-41018887)
chr4 (236-293)||(30496352-30496409)
chr4 (234-294)||(39029089-39029150)
chr4 (229-294)||(39077825-39077890)
chr4 (235-287)||(7385512-7385564)
chr4 (234-262)||(25343233-25343261)
chr4 (234-294)||(54967067-54967126)
[»] chr1 (49 HSPs)
chr1 (229-326)||(35253190-35253281)
chr1 (229-294)||(38478311-38478376)
chr1 (234-326)||(4349707-4349793)
chr1 (229-294)||(12126866-12126931)
chr1 (229-294)||(34725127-34725192)
chr1 (234-294)||(41319835-41319895)
chr1 (229-294)||(19414501-19414566)
chr1 (229-294)||(47214573-47214638)
chr1 (234-294)||(10378764-10378824)
chr1 (234-294)||(31382243-31382303)
chr1 (234-294)||(32632586-32632646)
chr1 (234-294)||(46247982-46248042)
chr1 (237-294)||(14617110-14617167)
chr1 (234-294)||(11596581-11596641)
chr1 (234-294)||(15505633-15505693)
chr1 (234-294)||(18724574-18724634)
chr1 (234-295)||(19932781-19932844)
chr1 (235-295)||(20036291-20036351)
chr1 (234-294)||(23768349-23768409)
chr1 (234-294)||(18944712-18944774)
chr1 (234-294)||(30395755-30395817)
chr1 (235-294)||(45812566-45812625)
chr1 (234-293)||(46991873-46991932)
chr1 (234-326)||(27474349-27474435)
chr1 (234-288)||(35117801-35117857)
chr1 (238-294)||(23796538-23796594)
chr1 (230-294)||(25468292-25468356)
chr1 (234-326)||(27201716-27201804)
chr1 (235-294)||(6925170-6925229)
chr1 (234-294)||(18741986-18742048)
chr1 (235-286)||(21910686-21910737)
chr1 (234-294)||(35005192-35005254)
chr1 (244-326)||(45402175-45402251)
chr1 (230-295)||(6358186-6358252)
chr1 (234-288)||(6983846-6983900)
chr1 (235-293)||(21723753-21723811)
chr1 (234-288)||(43768208-43768262)
chr1 (237-326)||(20004093-20004178)
chr1 (237-282)||(44485150-44485195)
chr1 (239-295)||(1517339-1517395)
chr1 (240-288)||(20999885-20999933)
chr1 (235-295)||(34148988-34149048)
chr1 (234-326)||(42304210-42304298)
chr1 (242-276)||(4430046-4430080)
chr1 (234-283)||(31442429-31442479)
chr1 (237-326)||(10668297-10668382)
chr1 (237-293)||(8197115-8197171)
chr1 (234-262)||(17470407-17470435)
chr1 (230-294)||(28894587-28894651)
[»] scaffold0015 (1 HSPs)
scaffold0015 (229-294)||(48663-48728)
[»] chr8 (39 HSPs)
chr8 (229-294)||(12670279-12670344)
chr8 (229-326)||(19729381-19729472)
chr8 (234-294)||(2626568-2626628)
chr8 (234-294)||(13160747-13160807)
chr8 (234-294)||(29877140-29877200)
chr8 (234-294)||(36720842-36720902)
chr8 (235-294)||(8897793-8897852)
chr8 (230-293)||(24365089-24365152)
chr8 (237-294)||(30454126-30454183)
chr8 (235-295)||(5135317-5135377)
chr8 (234-294)||(28817655-28817715)
chr8 (234-294)||(44530195-44530255)
chr8 (234-294)||(45071310-45071370)
chr8 (234-293)||(5689677-5689736)
chr8 (234-295)||(17823622-17823683)
chr8 (234-326)||(35261725-35261811)
chr8 (234-294)||(7136556-7136618)
chr8 (235-294)||(20284098-20284159)
chr8 (235-294)||(21070726-21070787)
chr8 (234-326)||(12625936-12626022)
chr8 (234-294)||(389691-389751)
chr8 (234-326)||(20869969-20870057)
chr8 (234-326)||(26954179-26954267)
chr8 (234-294)||(29521714-29521774)
chr8 (229-294)||(20869529-20869592)
chr8 (249-294)||(26102578-26102623)
chr8 (234-326)||(6760868-6760956)
chr8 (234-294)||(8483967-8484027)
chr8 (234-294)||(18164789-18164849)
chr8 (238-326)||(39460997-39461081)
chr8 (234-294)||(16225065-16225127)
chr8 (235-270)||(28873245-28873280)
chr8 (235-294)||(25250569-25250630)
chr8 (234-326)||(10857875-10857961)
chr8 (234-286)||(44742555-44742608)
chr8 (239-287)||(11000985-11001033)
chr8 (229-273)||(23286375-23286419)
chr8 (235-275)||(26457776-26457816)
chr8 (234-262)||(43942370-43942398)
[»] chr7 (43 HSPs)
chr7 (229-294)||(21172038-21172103)
chr7 (229-294)||(42391129-42391194)
chr7 (235-326)||(10693076-10693161)
chr7 (229-294)||(32758300-32758365)
chr7 (237-294)||(48735151-48735208)
chr7 (237-294)||(7879687-7879744)
chr7 (237-294)||(42798718-42798775)
chr7 (235-326)||(18512456-18512541)
chr7 (240-294)||(27889345-27889399)
chr7 (234-295)||(11617616-11617677)
chr7 (235-284)||(19265861-19265910)
chr7 (234-294)||(2541048-2541108)
chr7 (234-294)||(19266496-19266556)
chr7 (234-294)||(27629680-27629740)
chr7 (237-293)||(28362175-28362231)
chr7 (234-294)||(34626237-34626297)
chr7 (234-294)||(38604572-38604632)
chr7 (234-294)||(46354240-46354302)
chr7 (234-294)||(47716505-47716567)
chr7 (237-295)||(1408506-1408564)
chr7 (236-294)||(40463924-40463982)
chr7 (237-294)||(23231606-23231663)
chr7 (229-294)||(31591138-31591203)
chr7 (234-287)||(33871946-33871999)
chr7 (234-295)||(35334844-35334905)
chr7 (234-326)||(42805570-42805658)
chr7 (235-282)||(11741840-11741887)
chr7 (235-294)||(19426919-19426977)
chr7 (236-294)||(13805149-13805207)
chr7 (249-326)||(38262199-38262270)
chr7 (234-295)||(14099034-14099095)
chr7 (234-295)||(14409051-14409112)
chr7 (237-294)||(35787298-35787355)
chr7 (237-278)||(42476920-42476961)
chr7 (235-279)||(8148989-8149033)
chr7 (234-294)||(18747533-18747593)
chr7 (234-278)||(23419719-23419763)
chr7 (234-294)||(28078161-28078221)
chr7 (235-294)||(2662965-2663023)
chr7 (234-282)||(17048856-17048905)
chr7 (240-294)||(45018952-45019010)
chr7 (240-293)||(39123945-39124000)
chr7 (234-294)||(48123513-48123573)
[»] chr3 (39 HSPs)
chr3 (229-294)||(22122946-22123011)
chr3 (229-294)||(34771393-34771458)
chr3 (229-293)||(15797283-15797347)
chr3 (229-294)||(1217151-1217216)
chr3 (229-294)||(31592910-31592975)
chr3 (234-326)||(40272815-40272901)
chr3 (229-326)||(39203577-39203668)
chr3 (237-326)||(54484762-54484845)
chr3 (234-287)||(47624109-47624162)
chr3 (234-294)||(6411851-6411911)
chr3 (234-294)||(16735508-16735568)
chr3 (234-294)||(22609833-22609893)
chr3 (234-326)||(26869774-26869860)
chr3 (234-326)||(353352-353440)
chr3 (234-294)||(9276332-9276391)
chr3 (234-294)||(12914064-12914124)
chr3 (234-326)||(13628793-13628881)
chr3 (234-294)||(26573195-26573255)
chr3 (234-326)||(29366723-29366811)
chr3 (238-294)||(52926248-52926304)
chr3 (235-294)||(54374374-54374434)
chr3 (234-294)||(46421064-46421126)
chr3 (229-294)||(26292393-26292458)
chr3 (234-294)||(33926150-33926211)
chr3 (234-288)||(45786249-45786305)
chr3 (234-326)||(13730605-13730693)
chr3 (234-291)||(49013505-49013564)
chr3 (234-294)||(10795452-10795514)
chr3 (234-294)||(14987025-14987087)
chr3 (235-294)||(45948867-45948926)
chr3 (229-293)||(7696922-7696981)
chr3 (242-294)||(25517199-25517251)
chr3 (234-293)||(34420673-34420733)
chr3 (234-274)||(52428526-52428566)
chr3 (234-273)||(4495714-4495753)
chr3 (234-294)||(8247716-8247778)
chr3 (234-294)||(9607271-9607333)
chr3 (237-293)||(30928177-30928233)
chr3 (234-293)||(53996595-53996655)
[»] scaffold0180 (1 HSPs)
scaffold0180 (236-326)||(24136-24220)
[»] chr2 (40 HSPs)
chr2 (229-326)||(9671220-9671311)
chr2 (234-326)||(10546209-10546295)
chr2 (229-294)||(21779290-21779355)
chr2 (234-294)||(8455345-8455405)
chr2 (230-293)||(17623606-17623669)
chr2 (230-288)||(17668044-17668102)
chr2 (234-326)||(36871538-36871623)
chr2 (234-287)||(22371100-22371153)
chr2 (234-288)||(12023954-12024008)
chr2 (241-325)||(24859992-24860070)
chr2 (234-326)||(10543744-10543832)
chr2 (234-294)||(14444774-14444834)
chr2 (234-294)||(25249767-25249827)
chr2 (235-294)||(23397811-23397870)
chr2 (234-288)||(17380272-17380326)
chr2 (235-293)||(17896307-17896365)
chr2 (237-295)||(24890460-24890518)
chr2 (237-295)||(25079745-25079803)
chr2 (238-326)||(11514486-11514567)
chr2 (234-287)||(32781324-32781377)
chr2 (234-326)||(14530364-14530452)
chr2 (240-287)||(99301-99348)
chr2 (234-293)||(4516381-4516440)
chr2 (237-292)||(13245126-13245181)
chr2 (234-293)||(21377103-21377162)
chr2 (235-294)||(30826083-30826141)
chr2 (237-286)||(5450335-5450384)
chr2 (236-293)||(40762264-40762321)
chr2 (234-287)||(24200659-24200714)
chr2 (238-294)||(44643573-44643629)
chr2 (238-285)||(23145736-23145783)
chr2 (238-285)||(23557526-23557573)
chr2 (237-272)||(27573669-27573704)
chr2 (234-288)||(44449418-44449473)
chr2 (235-294)||(5841075-5841136)
chr2 (257-294)||(4794871-4794908)
chr2 (237-294)||(26684649-26684706)
chr2 (235-276)||(31821390-31821431)
chr2 (234-294)||(25641547-25641607)
chr2 (234-294)||(40416900-40416960)
[»] scaffold0168 (1 HSPs)
scaffold0168 (229-294)||(30618-30683)
[»] scaffold0057 (3 HSPs)
scaffold0057 (235-326)||(46878-46963)
scaffold0057 (234-294)||(24801-24861)
scaffold0057 (237-294)||(43706-43764)
[»] scaffold0311 (1 HSPs)
scaffold0311 (234-324)||(10856-10940)
[»] scaffold0187 (2 HSPs)
scaffold0187 (229-295)||(10078-10144)
scaffold0187 (229-295)||(20406-20472)
[»] scaffold1176 (1 HSPs)
scaffold1176 (229-294)||(1616-1681)
[»] scaffold0223 (1 HSPs)
scaffold0223 (238-294)||(11179-11235)
[»] scaffold0954 (1 HSPs)
scaffold0954 (237-294)||(3593-3650)
[»] scaffold0258 (1 HSPs)
scaffold0258 (237-294)||(13053-13110)
[»] scaffold0018 (1 HSPs)
scaffold0018 (237-294)||(72896-72953)
[»] scaffold0036 (1 HSPs)
scaffold0036 (234-278)||(35062-35106)


Alignment Details
Target: chr5 (Bit Score: 59; Significance: 7e-25; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 228 - 294
Target Start/End: Complemental strand, 34154909 - 34154843
Alignment:
Q  228 ataaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  34154909 ataaatcagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 34154843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 8170078 - 8170013
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  8170078 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 8170013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 32703463 - 32703528
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  32703463 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 32703528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 229 - 293
Target Start/End: Original strand, 7368437 - 7368501
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 293  Q
    |||| |||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||    
T  7368437 taaaacagggtaaggctgcgtacaatacaccaattggtgggaccccttcccggaccctgcatatg 7368501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 235 - 295
Target Start/End: Original strand, 24448937 - 24448997
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 295  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  24448937 agggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgca 24448997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 41014364 - 41014450
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||       |||||||||||||||||||||||| || ||||||    
T  41014364 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcctggaccc------cgcatatgcgggagctttagtgcaccgggttgccc 41014450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 43574652 - 43574712
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||||||||| |||||||| ||| ||||||||||||||||||| |||||    
T  43574652 cagggtaaggctgcgtacaatataccaaatggtgggaccccttcccggaccctgcgtatgc 43574712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 319
Target Start/End: Complemental strand, 19143032 - 19142953
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactgg 319  Q
    ||||||||||||||||||| ||||||||||| ||| |||||||||||||||      |||| |||||||||| |||||||||||||    
T  19143032 cagggtaaggctgcgtacagtacaccaaatggtgggaccccttcccggacc------atgcgtatgcgggagatttagtgcactgg 19142953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 2838824 - 2838884
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||||||||||| ||| | |||||| |||||||||| |||||    
T  2838824 cagggtaaggctgcgtacaatacaccaaatggtgggatcccttctcggaccctgcgtatgc 2838884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 235 - 326
Target Start/End: Original strand, 35710358 - 35710443
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    ||||||||||||||| |||||||||||||| ||| |||||||||||||      | ||||||||||||||||| |||||||| || ||||||    
T  35710358 agggtaaggctgcgttcaatacaccaaatggtgggaccccttcccgga------acatgcatatgcgggagctctagtgcaccgggttgccc 35710443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 38879627 - 38879715
Alignment:
Q  234 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    |||||||||||||||||||||||||||  |||| ||| ||||||||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  38879627 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 38879715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 4619195 - 4619133
Alignment:
Q  234 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||||||||||||||  |||| ||| |||||||||||||||| ||||||||    
T  4619195 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgc 4619133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 13801858 - 13801796
Alignment:
Q  234 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||||||||||||||  |||| ||| |||||||||||||||| ||||||||    
T  13801858 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgc 13801796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 316
Target Start/End: Complemental strand, 16880736 - 16880660
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcac 316  Q
    ||||||||||||||||||||||||||||||| ||  ||| |||||||||||      |||| |||||||||||||||||||||    
T  16880736 cagggtaaggctgcgtacaatacaccaaatggtgtgaccacttcccggacc------atgcgtatgcgggagctttagtgcac 16880660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 1565483 - 1565537
Alignment:
Q  239 taaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 293  Q
    |||||||||||||||| |||||||||  || ||||||||||||||||||||||||    
T  1565483 taaggctgcgtacaatgcaccaaatggcgggaccccttcccggaccctgcatatg 1565537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 20135653 - 20135713
Alignment:
Q  237 ggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgca 295  Q
    ||||||||||||||||||||||||  |||| ||| |||||||||||||||| |||||||||    
T  20135653 ggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgca 20135713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 288
Target Start/End: Original strand, 43334249 - 43334305
Alignment:
Q  234 cagggtaaggctgcgtacaatacacc--aaatgatggaaccccttcccggaccctgc 288  Q
    ||||||||||||||||||||||||||  ||||| ||| |||||||||||||||||||    
T  43334249 cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgc 43334305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 7097849 - 7097789
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||| |||||||||||||||||||| ||  ||||||||||| ||||||| |||||    
T  7097849 cagggtaaggttgcgtacaatacaccaaatggtgagaccccttcccgaaccctgcgtatgc 7097789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 22600500 - 22600560
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||| ||||||||||||||||| ||| | ||||||||||| ||||| |||||    
T  22600500 cagggtaaggctgtgtacaatacaccaaatggtgggatcccttcccggatcctgcgtatgc 22600560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 326
Target Start/End: Original strand, 16957374 - 16957446
Alignment:
Q  248 gtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    ||||||||||||||||| ||| ||||||||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  16957374 gtacaatacaccaaatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 16957446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 27328798 - 27328860
Alignment:
Q  234 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||||||||||||||  |||| ||| ||||||||||| ||||||| |||||    
T  27328798 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccgaaccctgcgtatgc 27328860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 29334444 - 29334501
Alignment:
Q  237 ggtaaggctgcgtacaatacacca-aatgatggaaccccttcccggaccctgcatatg 293  Q
    |||||||||||||||||||||||| |||| ||| |||| |||||||||||||| ||||    
T  29334444 ggtaaggctgcgtacaatacaccagaatggtgggacccattcccggaccctgcgtatg 29334501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 234 - 301
Target Start/End: Original strand, 41425994 - 41426061
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcg 301  Q
    |||||||||||||| ||||||||||||| || ||| |||||||||| ||| ||||  |||| ||||||    
T  41425994 cagggtaaggctgcatacaatacaccaattggtgggaccccttcccagactctgcggatgcgtatgcg 41426061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 1405244 - 1405293
Alignment:
Q  245 tgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||||||| ||| |||| |||| | |||||||||||||    
T  1405244 tgcgtacaatacaccaaatggtgggaccctttcctgaaccctgcatatgc 1405293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 283
Target Start/End: Original strand, 3771385 - 3771434
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggac 283  Q
    ||||||||||||| | |||||||||||| || ||| ||||||||||||||    
T  3771385 cagggtaaggctgtgaacaatacaccaattggtgggaccccttcccggac 3771434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 12477205 - 12477148
Alignment:
Q  239 taaggctgcgtacaatacacc-aaatgatggaaccccttcccggaccctgcatatgca 295  Q
    ||||||||||||||||||||| ||||| ||| |||||||||||||  |||| ||||||    
T  12477205 taaggctgcgtacaatacaccaaaatggtgggaccccttcccggattctgcgtatgca 12477148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 289
Target Start/End: Complemental strand, 11657785 - 11657733
Alignment:
Q  238 gtaaggctgcgtacaatacacc-aaatgatggaaccccttcccggaccctgca 289  Q
    |||||||||| ||||||||||| ||||| ||| ||||||||||| ||||||||    
T  11657785 gtaaggctgcatacaatacaccaaaatggtgggaccccttcccgaaccctgca 11657733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 42924923 - 42924876
Alignment:
Q  234 cagggtaaggctgcgtacaatacacc--aaatgatggaaccccttccc 279  Q
    |||||||||| |||||||||||||||  ||||||||||| ||||||||    
T  42924923 cagggtaaggttgcgtacaatacaccaaaaatgatggaatcccttccc 42924876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 25557764 - 25557829
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25557764 taaaacagggtaaggctgcgtacaatacaccaaatgaaggaaccccttcccggaccctgcatatgc 25557829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 1347003 - 1347068
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  1347003 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 1347068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 1354851 - 1354786
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  1354851 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 1354786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 26097199 - 26097264
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  26097199 taaaacagggtaaggctgcgtacaatacaccaaatgaagggaccccttcccggaccctgcatatgc 26097264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 326
Target Start/End: Complemental strand, 29355946 - 29355858
Alignment:
Q  234 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    |||||||||||||||||||||||||||  |||| ||| ||||||||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  29355946 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 29355858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 12222006 - 12221944
Alignment:
Q  234 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||||||||||||||  |||| ||| ||||||||||||||||||| |||||    
T  12222006 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgc 12221944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 32579474 - 32579531
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||| ||||||||||||| ||||||| ||| |||||||||| ||||||||||||||    
T  32579474 ggtaagcctgcgtacaataccccaaatggtgggaccccttcccagaccctgcatatgc 32579531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 279
Target Start/End: Original strand, 28007667 - 28007717
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttccc 279  Q
    |||| |||||| |||||||||||||||||||||||| ||| ||||||||||    
T  28007667 taaaacagggtcaggctgcgtacaatacaccaaatgctgggaccccttccc 28007717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 7947461 - 7947401
Alignment:
Q  234 cagggtaaggctgcgtacaatacacc-aaatgatggaaccccttcccggaccctgcatatg 293  Q
    |||||||||||||||||||||||||| ||||| |||  |||||||||||||| ||| ||||    
T  7947461 cagggtaaggctgcgtacaatacaccaaaatggtgggcccccttcccggaccttgcgtatg 7947401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 234 - 288
Target Start/End: Complemental strand, 15866126 - 15866074
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgc 288  Q
    |||||||| ||||||||  |||||||||||| ||| |||||||||||||||||||    
T  15866126 cagggtaaagctgcgta--atacaccaaatggtgggaccccttcccggaccctgc 15866074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 291
Target Start/End: Original strand, 6024282 - 6024338
Alignment:
Q  237 ggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcata 291  Q
    |||||| |||||||||||||||||  |||||||| ||| |||||||||||| |||||    
T  6024282 ggtaagactgcgtacaatacaccaataatgatgggacctcttcccggaccccgcata 6024338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 23930205 - 23930156
Alignment:
Q  245 tgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||| ||| ||| |||||||| |||||||||| |||||    
T  23930205 tgcgtacaatacaccagatggtgggaccccttcacggaccctgcttatgc 23930156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 287
Target Start/End: Original strand, 33138883 - 33138932
Alignment:
Q  238 gtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctg 287  Q
    ||||||| ||||||||||||||||||| ||| |||| || ||||||||||    
T  33138883 gtaaggccgcgtacaatacaccaaatggtgggacccttttccggaccctg 33138932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 274
Target Start/End: Original strand, 1941901 - 1941941
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaacccc 274  Q
    |||||||||||||||||||||||||| |||| ||| |||||    
T  1941901 cagggtaaggctgcgtacaatacaccgaatggtgggacccc 1941941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 229 - 295
Target Start/End: Complemental strand, 9832407 - 9832341
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 295  Q
    |||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  9832407 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgca 9832341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 20225023 - 20225088
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  20225023 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 20225088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 29207992 - 29207927
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  29207992 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 29207927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 30639425 - 30639511
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||||||||      |||||||||||||||||||||||||||| ||||||    
T  30639425 cagggtaaggctgcgtacaatacaccaaatggtgagaccccttcccggaccc------tgcatatgcgggagctttagtgcactgggttgccc 30639511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 47444003 - 47444064
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 295  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  47444003 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgca 47444064  T

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Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 5648304 - 5648390
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||      ||| ||||||||||||| |||||||||| ||||||    
T  5648304 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccc------tgcgtatgcgggagcttcagtgcactgggttgccc 5648390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 11054242 - 11054177
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| ||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  11054242 taaaacagggtaagactgcgtacaatacaccaaatggcggaaccccttcccggaccctgcatatgc 11054177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 48598919 - 48598854
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||    
T  48598919 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccatgcatatgc 48598854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 17043483 - 17043423
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||    
T  17043483 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccagaccctgcatatgc 17043423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 229 - 293
Target Start/End: Complemental strand, 47528624 - 47528560
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 293  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||    
T  47528624 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgaatatg 47528560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 5306757 - 5306694
Alignment:
Q  230 aaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 293  Q
    |||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  5306757 aaatcagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatg 5306694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 6430715 - 6430655
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||| |||||    
T  6430715 cagggtaaggctgcgtacaatacaccaaatggtgggaccacttcccggaccctgcgtatgc 6430655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 235 - 326
Target Start/End: Original strand, 25629096 - 25629181
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    |||||||||||| ||||||||||||||||| ||| ||||||||||||||||      | ||||||||||||||||||||||| || ||||||    
T  25629096 agggtaaggctgtgtacaatacaccaaatggtgggaccccttcccggaccc------tacatatgcgggagctttagtgcaccgggttgccc 25629181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 10277841 - 10277786
Alignment:
Q  239 taaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  10277841 taaggctgcgtacaatacaccaaatggtgaaaccccttcccagaccctgcatatgc 10277786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 326
Target Start/End: Complemental strand, 20639748 - 20639661
Alignment:
Q  234 cagggtaaggctgcgtacaatacacc-aaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    |||||||||||||||||||||||||| ||||| ||| ||||||||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  20639748 cagggtaaggctgcgtacaatacaccaaaatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 20639661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 326
Target Start/End: Original strand, 40915877 - 40915960
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    |||||||||||||||||||||||||||| ||| | ||||||||||||||      ||| ||||||||||||| ||||||| |||||||||    
T  40915877 ggtaaggctgcgtacaatacaccaaatggtgggagcccttcccggaccc------tgcgtatgcgggagcttcagtgcaccggattgccc 40915960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 234 - 326
Target Start/End: Complemental strand, 8473711 - 8473623
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaacccctt-cccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    |||||||||||||| |||||||||||||||| ||| ||||||| |||||||||      ||||||||||||||||||||||||| || ||||||    
T  8473711 cagggtaaggctgcatacaatacaccaaatggtgggaccccttccccggaccc-----ctgcatatgcgggagctttagtgcaccgggttgccc 8473623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 230 - 288
Target Start/End: Original strand, 16911604 - 16911664
Alignment:
Q  230 aaatcagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgc 288  Q
    |||||||||||||||||||||||||||||||  |||| ||| |||||||||||||||||||    
T  16911604 aaatcagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgc 16911664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 230 - 287
Target Start/End: Complemental strand, 47441623 - 47441566
Alignment:
Q  230 aaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctg 287  Q
    ||||||||||||||||| ||||||||||||||||| | | ||||||||||||||||||    
T  47441623 aaatcagggtaaggctgtgtacaatacaccaaatggttggaccccttcccggaccctg 47441566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 49796846 - 49796903
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||||||||||||||| ||| ||||||||||| ||||||| |||||    
T  49796846 ggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgaaccctgcgtatgc 49796903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 51865124 - 51865067
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||||||||||||||| |||  |||||||||||||||||| |||||    
T  51865124 ggtaaggctgcgtacaatacaccaaatggtggggccccttcccggaccctgcgtatgc 51865067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 7909370 - 7909310
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||| |||||||||||||||||||| ||| ||||||||||| ||||||| |||||    
T  7909370 cagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccgaaccctgcgtatgc 7909310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 326
Target Start/End: Complemental strand, 16408692 - 16408604
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaa--atgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    ||||||||| ||||||||||||||||||  ||| ||||||||||||||||||||       |||||||||||||||||||||||| || ||||||    
T  16408692 cagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccc------cgcatatgcgggagctttagtgcaccgggttgccc 16408604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 20225120 - 20225208
Alignment:
Q  234 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    |||||||||||||||||||||||||||  |||| ||| ||||||||||||||||       |||||||||||||||||||||||| || ||||||    
T  20225120 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccc------cgcatatgcgggagctttagtgcaccgggttgccc 20225208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 23501833 - 23501921
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaa--atgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    |||||||||| |||||||||||||||||  ||| ||| ||||||||||||||||      ||||||||||||||||||||||||| || ||||||    
T  23501833 cagggtaaggttgcgtacaatacaccaataatggtgggaccccttcccggaccc------tgcatatgcgggagctttagtgcaccgggttgccc 23501921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 30690265 - 30690205
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||| ||||||||||||| || ||| ||||||||||||||||||| |||||    
T  30690265 cagggtaaggctgcatacaatacaccaattggtgggaccccttcccggaccctgcgtatgc 30690205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 25463174 - 25463228
Alignment:
Q  240 aaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| ||||||||| |||||||||| ||| |||||||||||||||||||||||||    
T  25463174 aaggttgcgtacaacacaccaaatggtgggaccccttcccggaccctgcatatgc 25463228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 54175109 - 54175171
Alignment:
Q  234 cagggtaaggctgcgtacaatacacc-aaatgatggaacccctt-cccggaccctgcatatgc 294  Q
    |||||||||||||||||||||||||| ||||| ||| ||||||| ||||||||||||||||||    
T  54175109 cagggtaaggctgcgtacaatacaccaaaatggtgggaccccttccccggaccctgcatatgc 54175171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 54730301 - 54730358
Alignment:
Q  239 taaggctgcgtacaatacaccaa--atgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||| ||||||||||  ||||||||||||||||||||||||||| |||||    
T  54730301 taaggctgcgtataatacaccaataatgatggaaccccttcccggaccctgcgtatgc 54730358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 3580926 - 3580870
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 293  Q
    |||||||||| || |||||||||||||| | | ||||||||||||||||||||||||    
T  3580926 ggtaaggctgtgtgcaatacaccaaatgctaggaccccttcccggaccctgcatatg 3580870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 30581555 - 30581495
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaa-tgatggaaccccttcccggaccctgcatatg 293  Q
    |||||||||| || ||||||||||||||| || ||| ||||||||||||||||||||||||    
T  30581555 cagggtaagggtgtgtacaatacaccaaaatggtgggaccccttcccggaccctgcatatg 30581495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 55766555 - 55766495
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||||||||||||  |||| ||||||||| ||||||||| ||| |||||    
T  55766555 cagggtaaggctgcgtacaatacactgaatggtggaaccccatcccggaccttgcgtatgc 55766495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 9987922 - 9987863
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||| |||||||||||||||| ||| |||||||||  |||| |||||||||    
T  9987922 agggtaaggctgcatacaatacaccaaatggtgggaccccttccttgaccttgcatatgc 9987863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 14983881 - 14983940
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||| ||| |||||||||| ||||| ||| ||||||||||||||||||| |||||    
T  14983881 agggtaaggttgcctacaatacactaaatggtgggaccccttcccggaccctgcgtatgc 14983940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 20908723 - 20908665
Alignment:
Q  237 ggtaaggctgcgtacaatacacc-aaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||||| ||||||| |||||    
T  20908723 ggtaaggctgcgtacaatacaccaaaatggtgggaccccttcccgaaccctgcgtatgc 20908665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 288
Target Start/End: Original strand, 35567216 - 35567270
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgc 288  Q
    ||||||||||||| |||||| |||||||||| ||| ||||||||||| |||||||    
T  35567216 cagggtaaggctgtgtacaacacaccaaatggtgggaccccttcccgaaccctgc 35567270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 38786673 - 38786715
Alignment:
Q  252 aatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||| ||| |||||||||||||||||||||||||    
T  38786673 aatacaccaaatggtgggaccccttcccggaccctgcatatgc 38786715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 326
Target Start/End: Complemental strand, 17315378 - 17315337
Alignment:
Q  285 ctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    |||||||||| |||||||||||||||||||||||| ||||||    
T  17315378 ctgcatatgcgtatgcgggagctttagtgcactgggttgccc 17315337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 55830810 - 55830750
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||| ||||||||||||||||  |||| ||||||||| ||||||||| ||| |||||    
T  55830810 cagggtaatgctgcgtacaatacactgaatggtggaaccccatcccggaccttgcgtatgc 55830750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 234 - 293
Target Start/End: Original strand, 19027894 - 19027953
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 293  Q
    |||||||||||||||||||||||||||| || ||| ||||||| || ||| |||| ||||    
T  19027894 cagggtaaggctgcgtacaatacaccaattggtgggacccctttccagactctgcgtatg 19027953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 326
Target Start/End: Original strand, 21647011 - 21647098
Alignment:
Q  235 agggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    ||||||||||||||||||||| ||||  |||| ||| |||||||||| |||||       |||||||||||||||||||||||| || ||||||    
T  21647011 agggtaaggctgcgtacaatataccaataatggtgggaccccttcccagaccc------cgcatatgcgggagctttagtgcaccgggttgccc 21647098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 41018887 - 41018824
Alignment:
Q  230 aaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 293  Q
    |||| ||||||||||| |||||||||||||||||  ||| |||||||||| |||| ||| ||||    
T  41018887 aaattagggtaaggctacgtacaatacaccaaatagtgggaccccttcccagaccttgcgtatg 41018824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 293
Target Start/End: Complemental strand, 30496409 - 30496352
Alignment:
Q  236 gggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 293  Q
    |||||||||||| ||||||||||||||||  || || |||||||||||| ||| ||||    
T  30496409 gggtaaggctgcatacaatacaccaaatggggggactccttcccggaccgtgcttatg 30496352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 39029150 - 39029089
Alignment:
Q  234 cagggtaaggctgcgtacaatacac-caaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||| |||||||||||  ||||| ||| ||| ||| |||||||||||||||||    
T  39029150 cagggtaaggctgtgtacaatacacgaaaatggtgggaccactttccggaccctgcatatgc 39029089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 39077890 - 39077825
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| |||||||||| ||||||||||| |||||||| ||  ||  ||| |||||||||||||||||    
T  39077890 taaaacagggtaaggttgcgtacaatataccaaatggtgagacatctttccggaccctgcatatgc 39077825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 7385564 - 7385512
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctg 287  Q
    ||||||||| || || |||||||||||||| ||| |||| |||||||||||||    
T  7385564 agggtaaggttgtgtgcaatacaccaaatggtgggaccctttcccggaccctg 7385512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 262
Target Start/End: Original strand, 25343233 - 25343261
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaa 262  Q
    |||||||||||||||||||||||||||||    
T  25343233 cagggtaaggctgcgtacaatacaccaaa 25343261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 54967067 - 54967126
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||| ||| ||||||| |||||||| ||| ||||||||||| ||||| |||||||    
T  54967067 cagggtaaggttgc-tacaatataccaaatggtgggaccccttcccgtaccctacatatgc 54967126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 229 - 326
Target Start/End: Complemental strand, 35253281 - 35253190
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||      ||||||||||| |||||||| |||||||||    
T  35253281 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcat------atgcgggagctctagtgcaccggattgccc 35253190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 38478376 - 38478311
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  38478376 taaaacagggtaaggctgcgtacaatacaccaaatggtggaaccccttctcggaccctgcatatgc 38478311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 4349707 - 4349793
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  4349707 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 4349793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 12126931 - 12126866
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||    
T  12126931 taaaacagggtaaggctgcgtacaatacaccaaattgtgggaccccttcccggaccctgcatatgc 12126866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 34725192 - 34725127
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| ||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||    
T  34725192 taaaacagggtaaggctgcgtacaatacactaaatggtgggaccccttcccggaccctgcatatgc 34725127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 41319895 - 41319835
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||    
T  41319895 cagggtaaggctgcgtacaatacaccaaatgatgggaccccttcccgaacccttcatatgc 41319835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 19414501 - 19414566
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| |||| |||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||    
T  19414501 taaaacaggttaaggctgcgtacaatacaccaaatggtgggaccccttcccgtaccctgcatatgc 19414566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 47214573 - 47214638
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| |||||||||| |||||||||||||||||||| ||| |||||||||| ||||||||||||||    
T  47214573 taaaacagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccagaccctgcatatgc 47214638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 10378824 - 10378764
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||  |||||||||||||||    
T  10378824 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcttggaccctgcatatgc 10378764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 31382303 - 31382243
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| |||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||    
T  31382303 caggataaggctgcgtacaatacaccaaatggtgggaccccttcctggaccctgcatatgc 31382243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 32632646 - 32632586
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||  |||||||||||||    
T  32632646 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaaccctgcatatgc 32632586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 46248042 - 46247982
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| |||||    
T  46248042 cagggtaagactgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgc 46247982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 14617110 - 14617167
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||| |||||||||||||||||||| ||| | |||||||||||||||||||||||    
T  14617110 ggtaaggttgcgtacaatacaccaaatggtgggatcccttcccggaccctgcatatgc 14617167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 11596581 - 11596641
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||| ||||||||||||| ||| ||||||||| ||||||||| |||||    
T  11596581 cagggtaaggctgcgtataatacaccaaatggtgggaccccttcctggaccctgcgtatgc 11596641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 15505633 - 15505693
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||||| ||||||| |||||    
T  15505633 cagggtaagactgcgtacaatacaccaaatggtgggaccccttcccgaaccctgcgtatgc 15505693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 18724634 - 18724574
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||| ||||||||||||||||  ||| ||||||||||||||||| |||||||    
T  18724634 cagggtaaggctgtgtacaatacaccaaatcttgggaccccttcccggaccctacatatgc 18724574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 295
Target Start/End: Complemental strand, 19932844 - 19932781
Alignment:
Q  234 cagggtaaggctgcgtacaatacacc--aaatgatggaaccccttcccggaccctgcatatgca 295  Q
    ||||||||||||||||||||||||||  ||||| ||| ||||||||||||||||||| ||||||    
T  19932844 cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgca 19932781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 235 - 295
Target Start/End: Original strand, 20036291 - 20036351
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 295  Q
    ||||||||  ||||| |||||||||||||| ||||||||||||||||||||||| ||||||    
T  20036291 agggtaagattgcgttcaatacaccaaatggtggaaccccttcccggaccctgcgtatgca 20036351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 23768409 - 23768349
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||| |||||||| |||||    
T  23768409 cagggtaaggctgcgtacaatacaccaaatggtgggacaccttcccagaccctgcgtatgc 23768349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 18944712 - 18944774
Alignment:
Q  234 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||||||||||||||  |||| ||| ||||||||||||||||||| |||||    
T  18944712 cagggtaaggctgcgtacaatacaccaacaatggtgggaccccttcccggaccctgcgtatgc 18944774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 30395817 - 30395755
Alignment:
Q  234 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||||||||||||||  |||| ||| |||||||||||||||| ||||||||    
T  30395817 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgc 30395755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 45812625 - 45812566
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||| |||||||||||||||| ||| ||||||||||  |||||||||||||    
T  45812625 agggtaaggctgcatacaatacaccaaatggtgggaccccttcccaaaccctgcatatgc 45812566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 293
Target Start/End: Original strand, 46991873 - 46991932
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 293  Q
    ||||||||||||| |||||||||||| |||| ||| ||||||||||||||||||| ||||    
T  46991873 cagggtaaggctgtgtacaatacaccgaatggtgggaccccttcccggaccctgcgtatg 46991932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 27474349 - 27474435
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    ||||| || ||||||||||||||||  |||| ||| ||||||||||||||||      ||| ||||||||||||||||||||| |||||||||    
T  27474349 cagggcaaagctgcgtacaatacactgaatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccggattgccc 27474435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 288
Target Start/End: Complemental strand, 35117857 - 35117801
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaa--tgatggaaccccttcccggaccctgc 288  Q
    ||||||||||||| |||||||||||||||  |||||| |||||||||||||||||||    
T  35117857 cagggtaaggctgtgtacaatacaccaaaaatgatgggaccccttcccggaccctgc 35117801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 238 - 294
Target Start/End: Original strand, 23796538 - 23796594
Alignment:
Q  238 gtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||| |||||||||||||||||||| ||  |||||||||| ||||||||||||||    
T  23796538 gtaaggttgcgtacaatacaccaaatggtgagaccccttcccagaccctgcatatgc 23796594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 25468356 - 25468292
Alignment:
Q  230 aaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||| |||||||||||||||||||| | | ||| |||||| |||||||| |||||    
T  25468356 aaatcagggtaaggttgcgtacaatacaccaaatggttggacctcttcccagaccctgcgtatgc 25468292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 27201716 - 27201804
Alignment:
Q  234 cagggtaaggctgcgtacaatacacc--aaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    ||||||||||||||||||||||||||  ||||| ||| |||||||||||||||       ||| |||||||||||||||||||| ||| ||||||    
T  27201716 cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggacc------ttgcgtatgcgggagctttagtgcattgggttgccc 27201804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 6925170 - 6925229
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||| |||||||||| |||| ||| |||||||||||| |||||| |||||    
T  6925170 agggtaaggctgcggacaatacaccgaatggtgggaccccttcccggtccctgcgtatgc 6925229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 18742048 - 18741986
Alignment:
Q  234 cagggtaaggctgcgtacaatacacc--aaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||||||  ||||| ||| |||||||||| |||||||| |||||    
T  18742048 cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccagaccctgcgtatgc 18741986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 286
Target Start/End: Complemental strand, 21910737 - 21910686
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccct 286  Q
    ||||||||| |||||||||||||||||||| ||| ||||||||||| |||||    
T  21910737 agggtaaggttgcgtacaatacaccaaatggtgggaccccttcccgaaccct 21910686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 35005192 - 35005254
Alignment:
Q  234 cagggtaaggctgcgtacaatacacc--aaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||| |||||||||||  ||||| ||| ||||||||||||||||||| |||||    
T  35005192 cagggtaaggctgcatacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgc 35005254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 326
Target Start/End: Original strand, 45402175 - 45402251
Alignment:
Q  244 ctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    ||||||||||||||||||||| ||| |||||||||| |||||      ||| ||||||||||||||||||||| || ||||||    
T  45402175 ctgcgtacaatacaccaaatggtgggaccccttcccagaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 45402251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 295
Target Start/End: Original strand, 6358186 - 6358252
Alignment:
Q  230 aaatcagggtaaggctgcgtacaatacacc-aaatgatggaaccccttcccggaccctgcatatgca 295  Q
    |||||||||||| ||||||||||| ||||| ||||| ||| |||||||||| |||||||| ||||||    
T  6358186 aaatcagggtaaagctgcgtacaaaacaccaaaatggtgggaccccttcccagaccctgcgtatgca 6358252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 288
Target Start/End: Complemental strand, 6983900 - 6983846
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgc 288  Q
    |||||||||  |||||||||||||||||||| ||| ||||||| |||||||||||    
T  6983900 cagggtaagtatgcgtacaatacaccaaatggtgggacccctttccggaccctgc 6983846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 21723753 - 21723811
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 293  Q
    |||||||||||| ||||||||||||||||| | |||||  |||||||||||||| ||||    
T  21723753 agggtaaggctgagtacaatacaccaaatggtagaaccttttcccggaccctgcgtatg 21723811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 288
Target Start/End: Original strand, 43768208 - 43768262
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgc 288  Q
    |||||||||||||| ||||||||||||| || ||| |||||||||| ||||||||    
T  43768208 cagggtaaggctgcctacaatacaccaattggtgggaccccttcccagaccctgc 43768262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 326
Target Start/End: Complemental strand, 20004178 - 20004093
Alignment:
Q  237 ggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    ||||||||||||||||||||||||  |||| ||| |||||||||| |||||       |||||||||||||||||||||||| || ||||||    
T  20004178 ggtaaggctgcgtacaatacaccaataatggtgggaccccttcccagaccc------cgcatatgcgggagctttagtgcaccgggttgccc 20004093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 44485195 - 44485150
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccgga 282  Q
    |||||||||||||||||||||||||||| | | |||||||||||||    
T  44485195 ggtaaggctgcgtacaatacaccaaatggttggaccccttcccgga 44485150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 1517395 - 1517339
Alignment:
Q  239 taaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 295  Q
    ||||||||||||||||||||||| || ||| |||||||| | |||||||| ||||||    
T  1517395 taaggctgcgtacaatacaccaattggtgggaccccttctcagaccctgcgtatgca 1517339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 288
Target Start/End: Complemental strand, 20999933 - 20999885
Alignment:
Q  240 aaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgc 288  Q
    |||||||||||||||||||||||||||||  |||||||| | |||||||    
T  20999933 aaggctgcgtacaatacaccaaatgatggggccccttccggcaccctgc 20999885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 295
Target Start/End: Complemental strand, 34149048 - 34148988
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 295  Q
    ||||||||| ||||||||| | |||||||| ||  ||||||||| ||||||||||||||||    
T  34149048 agggtaaggttgcgtacaaaagaccaaatggtgagaccccttcctggaccctgcatatgca 34148988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 326
Target Start/End: Complemental strand, 42304298 - 42304210
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaa--tgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    |||||||||| |||||||||||||| |||  || ||| ||||||||||||||||      ||| |||| |||||||||||||||| |||||||||    
T  42304298 cagggtaaggttgcgtacaatacacaaaaaatggtgggaccccttcccggaccc------tgcgtatgtgggagctttagtgcaccggattgccc 42304210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 276
Target Start/End: Complemental strand, 4430080 - 4430046
Alignment:
Q  242 ggctgcgtacaatacaccaaatgatggaacccctt 276  Q
    ||||||||||||||||||||||| |||||||||||    
T  4430080 ggctgcgtacaatacaccaaatggtggaacccctt 4430046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 283
Target Start/End: Complemental strand, 31442479 - 31442429
Alignment:
Q  234 cagggtaaggctgcgtacaatacacc-aaatgatggaaccccttcccggac 283  Q
    |||||||||| ||||||||||||||| ||||| ||| ||||||||||||||    
T  31442479 cagggtaaggatgcgtacaatacaccaaaatggtgggaccccttcccggac 31442429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 326
Target Start/End: Original strand, 10668297 - 10668382
Alignment:
Q  237 ggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    ||||||| ||||||||||||||||  |||| ||| |||||||||||| |||      ||| ||||||||||||||||||||| || ||||||    
T  10668297 ggtaaggttgcgtacaatacaccaataatggtgggaccccttcccggtccc------tgcgtatgcgggagctttagtgcaccgggttgccc 10668382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 8197115 - 8197171
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 293  Q
    ||||||||| |||||| ||||||||||| | | |||||||| |||||||||| ||||    
T  8197115 ggtaaggctacgtacagtacaccaaatggtaggaccccttctcggaccctgcgtatg 8197171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 262
Target Start/End: Complemental strand, 17470435 - 17470407
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaa 262  Q
    |||||||||||||||||||||||||||||    
T  17470435 cagggtaaggctgcgtacaatacaccaaa 17470407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 28894651 - 28894587
Alignment:
Q  230 aaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||| || ||||| ||||||||||||| |||||| |  ||||||||||  ||||||||||||||    
T  28894651 aaatccggataaggttgcgtacaatacatcaaatggtaaaaccccttcctagaccctgcatatgc 28894587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 48728 - 48663
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  48728 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 48663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 6e-22; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 12670344 - 12670279
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  12670344 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 12670279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 229 - 326
Target Start/End: Original strand, 19729381 - 19729472
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    |||| ||||||||||||| ||||||||||||||||| ||| ||||||||||||||||      ||||||| |||||||| ||||||||||||||||||    
T  19729381 taaaacagggtaaggctgtgtacaatacaccaaatggtgggaccccttcccggaccc------tgcatatacgggagctctagtgcactggattgccc 19729472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 2626568 - 2626628
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  2626568 cagggtaagactgcgtacaatacaccaaatgatgggaccccttcccagaccctgcatatgc 2626628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 13160747 - 13160807
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||    
T  13160747 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgc 13160807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 29877140 - 29877200
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||    
T  29877140 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgc 29877200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 36720842 - 36720902
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||    
T  36720842 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgc 36720902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 8897852 - 8897793
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  8897852 agggtaaggctacgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 8897793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 24365152 - 24365089
Alignment:
Q  230 aaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 293  Q
    ||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||| ||||    
T  24365152 aaatcagggtaaggctgcgaacaatacaccaaatggtgggaccccttcccggaccctgcgtatg 24365089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 30454183 - 30454126
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||    
T  30454183 ggtaaggctgcgtacgatacaccaaatggtgggaccccttcccggaccctgcatatgc 30454126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 235 - 295
Target Start/End: Complemental strand, 5135377 - 5135317
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 295  Q
    |||||||||||| ||||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  5135377 agggtaaggctgtgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgca 5135317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 28817715 - 28817655
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||||||||||||| |||| ||| ||||||||||||||||||| |||||    
T  28817715 cagggtaaggctgcgtacaatacacccaatggtgggaccccttcccggaccctgcgtatgc 28817655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 44530195 - 44530255
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||| |||||    
T  44530195 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcctggaccctgcgtatgc 44530255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 45071310 - 45071370
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||| |||||    
T  45071310 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccttgcgtatgc 45071370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 234 - 293
Target Start/End: Original strand, 5689677 - 5689736
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 293  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||| ||||    
T  5689677 cagggtaaggctgcgtacaatacaccaaatggtggaaccccttcccgaaccatgcgtatg 5689736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 17823622 - 17823683
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 295  Q
    |||| |||| ||||||| ||||||||||||| ||||||||||||||| ||||||||||||||    
T  17823622 caggataagactgcgtaaaatacaccaaatggtggaaccccttcccgaaccctgcatatgca 17823683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 35261725 - 35261811
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    |||||||||| |||||||||||||||||||| ||| ||||||||| ||||||      ||| ||||||||||||||||||||| || ||||||    
T  35261725 cagggtaaggttgcgtacaatacaccaaatggtgggaccccttcctggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 35261811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 7136618 - 7136556
Alignment:
Q  234 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||||||||||||||  |||| ||| |||||||||||||||| ||||||||    
T  7136618 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgc 7136556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 20284159 - 20284098
Alignment:
Q  235 agggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||||||  |||| ||| ||||||||||||||||||| |||||    
T  20284159 agggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgc 20284098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 21070787 - 21070726
Alignment:
Q  235 agggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||||||  |||| ||| ||||||||||||||||||| |||||    
T  21070787 agggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgc 21070726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 12625936 - 12626022
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    ||||||||| |||| |||||||||||||||| ||| ||||| ||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  12625936 cagggtaagactgcatacaatacaccaaatggtgggaccccctcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 12626022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 389691 - 389751
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||| |||||||||||||||||||||||| | ||||| || |||||||| |||||    
T  389691 cagggtaaggttgcgtacaatacaccaaatgatgggatccctttcctgaccctgcgtatgc 389751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 20869969 - 20870057
Alignment:
Q  234 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    |||||||||||||||||||||||||||  |||| ||| ||||||||| ||||||       |||||||||||||||||||||||| || ||||||    
T  20869969 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttccaggaccc------cgcatatgcgggagctttagtgcaccgggttgccc 20870057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 26954179 - 26954267
Alignment:
Q  234 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    |||||||||||||||||||||||||||  |||| ||| |||||||||| ||||        ||||||||||||||||||||||||||| ||||||    
T  26954179 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccagacc------tcgcatatgcgggagctttagtgcactgggttgccc 26954267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 29521774 - 29521714
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||||||||||| ||| | ||| |||| |||||||| |||||    
T  29521774 cagggtaaggctgcgtacaatacaccaaatggtgggaacccatcccagaccctgcgtatgc 29521714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 20869592 - 20869529
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| ||||||||||||| ||||||||||||||  | ||  |||||||||||||||||||||||||    
T  20869592 taaaacagggtaaggctgtgtacaatacaccaa--ggtgagaccccttcccggaccctgcatatgc 20869529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 294
Target Start/End: Original strand, 26102578 - 26102623
Alignment:
Q  249 tacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||| ||| ||||||||||||||||||| |||||    
T  26102578 tacaatacaccaaatggtgggaccccttcccggaccctgcttatgc 26102623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 6760868 - 6760956
Alignment:
Q  234 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    |||||||||||| ||||||||||||||  |||| ||| |||||||| |||||||       |||||||||||||||||||||||| || ||||||    
T  6760868 cagggtaaggcttcgtacaatacaccaataatggtgggaccccttctcggaccc------cgcatatgcgggagctttagtgcaccgggttgccc 6760956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 8484027 - 8483967
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||| |||||||||||||||||||||| || ||| ||||| |||| |||||||| |||||    
T  8484027 cagggcaaggctgcgtacaatacaccaattggtgggaccccatcccagaccctgcgtatgc 8483967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 18164849 - 18164789
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||| |||||||||||||||||| ||||  |||  |||||||||||||| |||||    
T  18164849 cagggtaaggttgcgtacaatacaccaaaggatgtgaccatttcccggaccctgcgtatgc 18164789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 326
Target Start/End: Complemental strand, 39461081 - 39460997
Alignment:
Q  238 gtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    |||||||||||||||||||||||  |||| ||  ||||||||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  39461081 gtaaggctgcgtacaatacaccaataatggtgagaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 39460997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 16225065 - 16225127
Alignment:
Q  234 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||| |||||||||||||||||  |||| ||| | |||||||||||||| ||||||||    
T  16225065 cagggtaagactgcgtacaatacaccaataatggtgggatcccttcccggaccccgcatatgc 16225127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 270
Target Start/End: Original strand, 28873245 - 28873280
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaa 270  Q
    ||||||||| ||||||||||||||||||||||||||    
T  28873245 agggtaaggttgcgtacaatacaccaaatgatggaa 28873280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 25250569 - 25250630
Alignment:
Q  235 agggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||| |||||||||||||||||||  |||| ||| ||||||||||| |||| ||||||||    
T  25250569 agggtatggctgcgtacaatacaccaataatggtgggaccccttcccgaaccccgcatatgc 25250630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 10857875 - 10857961
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    ||||||||||||||| |||||||||||| || ||| ||| ||||| |||||       ||| ||||||||||||||||||||| || ||||||    
T  10857875 cagggtaaggctgcgcacaatacaccaattggtgggaccacttcctggacc------ttgcgtatgcgggagctttagtgcaccgggttgccc 10857961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 44742608 - 44742555
Alignment:
Q  234 cagggtaaggctgcgtacaatacacc-aaatgatggaaccccttcccggaccct 286  Q
    |||||||||||||||||||||||||| ||||| ||| ||||||||  |||||||    
T  44742608 cagggtaaggctgcgtacaatacaccaaaatggtgggaccccttcttggaccct 44742555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 11001033 - 11000985
Alignment:
Q  239 taaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctg 287  Q
    |||||||| ||||||||||||||||| ||| |||||| |||| ||||||    
T  11001033 taaggctgtgtacaatacaccaaatggtgggacccctacccgaaccctg 11000985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 23286419 - 23286375
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccc 273  Q
    |||| |||||||| |||||||||||||||||||||| ||| ||||    
T  23286419 taaaacagggtaaagctgcgtacaatacaccaaatggtgggaccc 23286375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 26457776 - 26457816
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaacccct 275  Q
    ||||||||||||||||||||||||||| || ||| ||||||    
T  26457776 agggtaaggctgcgtacaatacaccaattggtgggacccct 26457816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 262
Target Start/End: Original strand, 43942370 - 43942398
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaa 262  Q
    |||||||||||||||||||||||||||||    
T  43942370 cagggtaaggctgcgtacaatacaccaaa 43942398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 6e-22; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 21172103 - 21172038
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  21172103 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 21172038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 42391194 - 42391129
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  42391194 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 42391129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 235 - 326
Target Start/End: Complemental strand, 10693161 - 10693076
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||      ||||||||||| ||||||||||| ||||||    
T  10693161 agggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcat------atgcgggagctctagtgcactgggttgccc 10693076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 32758300 - 32758365
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| ||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  32758300 taaaacagggtaaggctgtgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 32758365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 48735208 - 48735151
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  48735208 ggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 48735151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 7879687 - 7879744
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||    
T  7879687 ggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgc 7879744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 42798718 - 42798775
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  42798718 ggtaaggctgcgtacaatacaccaaatggtgggaccctttcccggaccctgcatatgc 42798775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 235 - 326
Target Start/End: Complemental strand, 18512541 - 18512456
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    ||||||||||||||||||||||||| |||| ||| ||||||||||||||||      ||| |||||||||||||| ||||||||| ||||||    
T  18512541 agggtaaggctgcgtacaatacaccgaatggtgggaccccttcccggaccc------tgcgtatgcgggagctttggtgcactgggttgccc 18512456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 27889399 - 27889345
Alignment:
Q  240 aaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||    
T  27889399 aaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgc 27889345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 234 - 295
Target Start/End: Complemental strand, 11617677 - 11617616
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 295  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||| ||||||||| ||||||    
T  11617677 cagggtaagactgcgtacaatacaccaaatggtgggaccccttcctggaccctgcgtatgca 11617616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 19265861 - 19265910
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggacc 284  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  19265861 agggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggacc 19265910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 2541108 - 2541048
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||||| |||||||||||| ||| |||||||||||| |||||| |||||    
T  2541108 cagggtaaggctgcgtactatacaccaaatggtgggaccccttcccggtccctgcgtatgc 2541048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 19266496 - 19266556
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||||||||||  ||| | ||||||||||||||||| |||||    
T  19266496 cagggtaaggctgcgtacaatacaccaaattgtgggatcccttcccggaccctgcgtatgc 19266556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 27629680 - 27629740
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||| |||||| ||||||||||||| ||| |||||||||||| ||||||||||||    
T  27629680 cagggtaaggttgcgtaaaatacaccaaatggtgggaccccttcccgggccctgcatatgc 27629740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 28362231 - 28362175
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 293  Q
    |||||||||||||||||||||||||||| ||| |||||||||| |||| ||||||||    
T  28362231 ggtaaggctgcgtacaatacaccaaatggtgggaccccttcccagaccttgcatatg 28362175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 34626297 - 34626237
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||| |||||||||||||| ||| | ||||||||||||||||| |||||    
T  34626297 cagggtaaggctgcgttcaatacaccaaatggtgggatcccttcccggaccctgcgtatgc 34626237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 38604572 - 38604632
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||||||||||| ||  ||||||| ||||||||||| |||||    
T  38604572 cagggtaaggctgcgtacaatacaccaaatggtgagacccctttccggaccctgcgtatgc 38604632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 46354240 - 46354302
Alignment:
Q  234 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||||||||||||||  |||| ||| |||||||||||||||| ||||||||    
T  46354240 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgc 46354302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 47716505 - 47716567
Alignment:
Q  234 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||||||||||||||  |||| ||| |||||||||||||||| ||||||||    
T  47716505 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgc 47716567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 1408506 - 1408564
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 295  Q
    |||||||||| |||||||||| |||||| ||| ||||||||||||||||||| ||||||    
T  1408506 ggtaaggctgtgtacaatacagcaaatggtgggaccccttcccggaccctgcgtatgca 1408564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 236 - 294
Target Start/End: Original strand, 40463924 - 40463982
Alignment:
Q  236 gggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||| ||||||||||||| ||| |||||||| |||||||||| |||||    
T  40463924 gggtaaggctgcgtataatacaccaaatggtgggaccccttctcggaccctgcgtatgc 40463982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 23231606 - 23231663
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||| |||||||| |||||||| ||||||||||| ||||||| |||||    
T  23231606 ggtaaggctgcgtataatacaccgaatgatgggaccccttcccgaaccctgcgtatgc 23231663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 31591203 - 31591138
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| ||| ||||||||||||||||||||  ||||| ||| ||||||||||||||| |||||||||    
T  31591203 taaaacagagtaaggctgcgtacaatacaataaatggtgggaccccttcccggaccttgcatatgc 31591138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 33871999 - 33871946
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctg 287  Q
    |||| |||||||||||||||||||||||||| ||| |||||||||| |||||||    
T  33871999 caggataaggctgcgtacaatacaccaaatggtgggaccccttcccagaccctg 33871946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 295
Target Start/End: Complemental strand, 35334905 - 35334844
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 295  Q
    ||||||||| ||| |||||||||||| |||| ||| ||||||||||||||||||| ||||||    
T  35334905 cagggtaagactgtgtacaatacaccgaatggtgggaccccttcccggaccctgcgtatgca 35334844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 42805570 - 42805658
Alignment:
Q  234 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    ||||||||||||| |||||||||||||  |||| ||| ||||||||||||||||       |||||||||||||||||||||||| || ||||||    
T  42805570 cagggtaaggctgtgtacaatacaccaataatggtgggaccccttcccggaccc------cgcatatgcgggagctttagtgcaccgggttgccc 42805658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 282
Target Start/End: Original strand, 11741840 - 11741887
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccgga 282  Q
    |||||||||||||||||||||||||||||| ||| | |||||||||||    
T  11741840 agggtaaggctgcgtacaatacaccaaatggtgggatcccttcccgga 11741887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 19426977 - 19426919
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||| ||||||||||||||||||||| ||| | |||||| ||||||||||||||||    
T  19426977 agggtaagactgcgtacaatacaccaaatggtggga-cccttctcggaccctgcatatgc 19426919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 294
Target Start/End: Original strand, 13805149 - 13805207
Alignment:
Q  236 gggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||| ||||||||||||||||| ||| ||| ||||| ||||||||| |||||    
T  13805149 gggtaaggctgtgtacaatacaccaaatggtgggaccacttcctggaccctgcgtatgc 13805207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 38262270 - 38262199
Alignment:
Q  249 tacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    |||||||||||||||||||| ||||||||||| || |      ||| ||||||||||||||||||||| |||||||||    
T  38262270 tacaatacaccaaatgatgggaccccttcccgaacac------tgcgtatgcgggagctttagtgcaccggattgccc 38262199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 295
Target Start/End: Complemental strand, 14099095 - 14099034
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 295  Q
    |||| |||| ||||||||||||||||||||| ||| ||||||||||| ||||| | ||||||    
T  14099095 caggttaagactgcgtacaatacaccaaatggtgggaccccttcccgaaccctacgtatgca 14099034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 295
Target Start/End: Complemental strand, 14409112 - 14409051
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 295  Q
    |||| |||| ||||||||||||||||||||| ||| ||||||||||| ||||| | ||||||    
T  14409112 caggttaagactgcgtacaatacaccaaatggtgggaccccttcccgaaccctacgtatgca 14409051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 35787355 - 35787298
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||| ||||||||||||||||||||  || ||||||||||||||| ||| |||||    
T  35787355 ggtaaggttgcgtacaatacaccaaatggcgggaccccttcccggaccttgcgtatgc 35787298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 278
Target Start/End: Original strand, 42476920 - 42476961
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcc 278  Q
    |||||||||||||||||||||||||||| ||| |||||||||    
T  42476920 ggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 42476961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 8149033 - 8148989
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaaccccttccc 279  Q
    ||||||||| |||||||||||||||||||| ||| ||||||||||    
T  8149033 agggtaaggttgcgtacaatacaccaaatggtgggaccccttccc 8148989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 18747533 - 18747593
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||| |||||||||| || ||| ||||||||| | ||||||| |||||    
T  18747533 cagggtaaggctgcgtataatacaccaattggtgggaccccttcctgaaccctgcgtatgc 18747593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 278
Target Start/End: Complemental strand, 23419763 - 23419719
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcc 278  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||    
T  23419763 cagggtaagactgcgtacaatacaccaaatggtgggaccccttcc 23419719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 28078221 - 28078161
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||| ||| | |||||||||||||| ||| ||||||||||| | |||||||||||    
T  28078221 cagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgc 28078161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 2663023 - 2662965
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||||||||||||||||| ||| | |||||  | ||||||||||||||    
T  2663023 agggtaaggctgcgtacaatacaccaaatggtggga-cccttttcagaccctgcatatgc 2662965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 17048905 - 17048856
Alignment:
Q  234 cagggtaaggctgcgtacaatacacc-aaatgatggaaccccttcccgga 282  Q
    |||||||||| | ||||||||||||| ||||| |||||||||||||||||    
T  17048905 cagggtaaggttacgtacaatacaccaaaatggtggaaccccttcccgga 17048856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 45019010 - 45018952
Alignment:
Q  240 aaggctgcgtacaatacaccaaa----tgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||| ||||||    || ||||||||||||||||||||||| |||||    
T  45019010 aaggctgcgtacaatataccaaaaaactggtggaaccccttcccggaccctgcgtatgc 45018952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 39123945 - 39124000
Alignment:
Q  240 aaggctgcgtacaatacaccaaa--tgatggaaccccttcccggaccctgcatatg 293  Q
    ||||||||||| |||||||||||  || ||| ||||||||||||||||||| ||||    
T  39123945 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatg 39124000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 48123573 - 48123513
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||  |||| |||||||||||||||| ||| ||||||| | ||||| |||||||||    
T  48123573 cagggtaaaactgcatacaatacaccaaatggtgggacccctttctggaccatgcatatgc 48123513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 6e-22; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 22123011 - 22122946
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  22123011 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 22122946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 34771458 - 34771393
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  34771458 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 34771393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 229 - 293
Target Start/End: Original strand, 15797283 - 15797347
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 293  Q
    |||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  15797283 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatg 15797347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 1217151 - 1217216
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| |||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||    
T  1217151 taaaacagggtaaggctgcgtacaatacaccaaatggcgggaccccttcccggaccctgcatatgc 1217216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 31592910 - 31592975
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| ||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||    
T  31592910 taaaacagggtaaggctgcgtacaatacaccaaatggtgggactccttcccggaccctgcatatgc 31592975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 234 - 326
Target Start/End: Complemental strand, 40272901 - 40272815
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  40272901 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 40272815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 229 - 326
Target Start/End: Original strand, 39203577 - 39203668
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    |||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||       ||||||||||||||||||||||||| || ||||||    
T  39203577 taaaacagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccggacc------ttgcatatgcgggagctttagtgcaccgggttgccc 39203668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 326
Target Start/End: Original strand, 54484762 - 54484845
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  54484762 ggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 54484845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 47624109 - 47624162
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctg 287  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  47624109 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctg 47624162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 6411911 - 6411851
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||| ||| |||||    
T  6411911 cagggtaaggctgcgtacaatacaccaaatgatgggaccccttcccagaccttgcgtatgc 6411851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 16735508 - 16735568
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||| |||| |||||    
T  16735508 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggacactgcgtatgc 16735568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 22609833 - 22609893
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||| |||||    
T  22609833 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccttgcgtatgc 22609893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 26869774 - 26869860
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| |||||||      |||| |||||||||||||| |||||| || ||||||    
T  26869774 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttgccggacc------atgcgtatgcgggagctttggtgcaccgggttgccc 26869860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 326
Target Start/End: Complemental strand, 353440 - 353352
Alignment:
Q  234 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    |||||||||||||||||||||||||||  |||| ||| ||||||||||||||||       |||||||||||||||||||||||| || ||||||    
T  353440 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccc------cgcatatgcgggagctttagtgcaccgggttgccc 353352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 9276332 - 9276391
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||||||||||| ||| |||| |||||||||||||| |||||    
T  9276332 cagggtaaggctgcgtacaatacaccaaatggtgg-accctttcccggaccctgcgtatgc 9276391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 12914124 - 12914064
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||| ||||||||||||||||||| ||  |||||||||| ||||||||||||||    
T  12914124 cagggtaaggcggcgtacaatacaccaaatggtgagaccccttcccagaccctgcatatgc 12914064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 326
Target Start/End: Complemental strand, 13628881 - 13628793
Alignment:
Q  234 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    |||||||||||||||||||||||||||  |||| ||| ||||||||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  13628881 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 13628793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 26573195 - 26573255
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||||||||||||||| || ||| ||||| ||||||||||||| |||||    
T  26573195 cagggtaaggctgcgtacaatacaccaattggtgggaccccatcccggaccctgcgtatgc 26573255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 326
Target Start/End: Complemental strand, 29366811 - 29366723
Alignment:
Q  234 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    |||||||||||||||||||||||||||  |||| ||| ||||||||||||||||      ||| |||| ||||||||||||||||||| ||||||    
T  29366811 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccc------tgcgtatgtgggagctttagtgcactgggttgccc 29366723  T

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Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 238 - 294
Target Start/End: Complemental strand, 52926304 - 52926248
Alignment:
Q  238 gtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||||||| ||| || |||||||||||||||| |||||    
T  52926304 gtaaggctgcgtacaatacaccaaatggtgggacaccttcccggaccctgcgtatgc 52926248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 54374434 - 54374374
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaa-tgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||||||| ||||||| || ||| |||||||||||||||||||||||||    
T  54374434 agggtaaggctgcgtacaatccaccaaaatggtgggaccccttcccggaccctgcatatgc 54374374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 46421126 - 46421064
Alignment:
Q  234 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||||||||||||||  |||| ||| ||||||||||||||||||| |||||    
T  46421126 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgc 46421064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 26292393 - 26292458
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| ||||||||| | |||||| |||||||||||||||| | ||||||||| |||||||||||||    
T  26292393 taaaacagggtaagaccgcgtacgatacaccaaatgatgggatcccttcccgaaccctgcatatgc 26292458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 33926150 - 33926211
Alignment:
Q  234 cagggtaaggctgcgtacaatacacca-aatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||| ||||||||||||| |||| ||| ||||||||| |||||||||||||||    
T  33926150 cagggtaaggctgtgtacaatacaccataatggtgggaccccttcctggaccctgcatatgc 33926211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 288
Target Start/End: Complemental strand, 45786305 - 45786249
Alignment:
Q  234 cagggtaaggctgcgtacaatacacc--aaatgatggaaccccttcccggaccctgc 288  Q
    ||||||||||||||||||||||||||  ||||| ||| |||||||||||||||||||    
T  45786305 cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgc 45786249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 234 - 326
Target Start/End: Complemental strand, 13730693 - 13730605
Alignment:
Q  234 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    ||||||||||||| |||||||||||||  |||| ||| ||||||||||||||||       |||||||||||||||||||||||| || ||||||    
T  13730693 cagggtaaggctgtgtacaatacaccaataatggtgggaccccttcccggaccc------cgcatatgcgggagctttagtgcaccgggttgccc 13730605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 234 - 291
Target Start/End: Complemental strand, 49013564 - 49013505
Alignment:
Q  234 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcata 291  Q
    |||||||||||||||||||||||||||  |||| ||| |||||||||||||||| |||||    
T  49013564 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcata 49013505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 10795514 - 10795452
Alignment:
Q  234 cagggtaaggctgcgtacaatacacc--aaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||||||  ||||| ||| ||||||||| ||||||||| |||||    
T  10795514 cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 10795452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 14987025 - 14987087
Alignment:
Q  234 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||||||||||||||  |||| ||| |||| |||||||||| |||||||||    
T  14987025 cagggtaaggctgcgtacaatacaccaataatggtgggacccattcccggaccttgcatatgc 14987087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 45948926 - 45948867
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||| ||||||||||||| || ||| |||||||| |||||||||| |||||    
T  45948926 agggtaaggctgcatacaatacaccaattggtgggaccccttctcggaccctgcgtatgc 45948867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 293
Target Start/End: Complemental strand, 7696981 - 7696922
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 293  Q
    |||| |||||||||||||||||||||||||||||||      ||||||||||||| |||||||||    
T  7696981 taaaacagggtaaggctgcgtacaatacaccaaatg-----gccccttcccggacactgcatatg 7696922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 25517251 - 25517199
Alignment:
Q  242 ggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||| ||||| ||| ||||||||||||| ||||| |||||    
T  25517251 ggctgcgtacaatacacaaaatggtgggaccccttcccggatcctgcgtatgc 25517199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 34420733 - 34420673
Alignment:
Q  234 cagggtaaggctgcgtacaatacacc-aaatgatggaaccccttcccggaccctgcatatg 293  Q
    |||||||||||||||||| ||||||| ||||| ||| ||||||||||||||| ||| ||||    
T  34420733 cagggtaaggctgcgtaccatacaccaaaatggtgggaccccttcccggaccttgcgtatg 34420673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 274
Target Start/End: Complemental strand, 52428566 - 52428526
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaacccc 274  Q
    ||||||||||||||||||||||||||||||  |||||||||    
T  52428566 cagggtaaggctgcgtacaatacaccaaatagtggaacccc 52428526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 234 - 273
Target Start/End: Complemental strand, 4495753 - 4495714
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccc 273  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  4495753 cagggtaaggctgcgtacaatacaccaaatggtgggaccc 4495714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 8247778 - 8247716
Alignment:
Q  234 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||| ||||||||||||||||  |||| ||| || |||||||||||||||| |||||    
T  8247778 cagggtaaggttgcgtacaatacaccaataatggtgggactccttcccggaccctgcgtatgc 8247716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 9607271 - 9607333
Alignment:
Q  234 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||| |||||||||  |||| ||| |||||||||| ||||| ||||||||    
T  9607271 cagggtaaggctgcgtagaatacaccaataatgttgggaccccttcccagaccccgcatatgc 9607333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 30928233 - 30928177
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 293  Q
    ||||||| || ||| |||||||||| ||  || ||||||||||||||||||||||||    
T  30928233 ggtaaggttgtgtaaaatacaccaattggcgggaccccttcccggaccctgcatatg 30928177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 53996655 - 53996595
Alignment:
Q  234 cagggtaaggctgcgtacaatacacc-aaatgatggaaccccttcccggaccctgcatatg 293  Q
    |||||||||||||| ||||||||||| ||||| ||| |||||||||| ||| |||| ||||    
T  53996655 cagggtaaggctgcttacaatacaccaaaatggtgggaccccttccctgacactgcgtatg 53996595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 236 - 326
Target Start/End: Complemental strand, 24220 - 24136
Alignment:
Q  236 gggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||      ||||||||||| |||||||| |||||||||    
T  24220 gggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcat------atgcgggagctctagtgcaccggattgccc 24136  T

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Target: chr2 (Bit Score: 51; Significance: 4e-20; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 229 - 326
Target Start/End: Original strand, 9671220 - 9671311
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    |||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  9671220 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 9671311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 10546209 - 10546295
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  10546209 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 10546295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 21779355 - 21779290
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  21779355 taaaacagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 21779290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 8455405 - 8455345
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||    
T  8455405 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgc 8455345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 293
Target Start/End: Original strand, 17623606 - 17623669
Alignment:
Q  230 aaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 293  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||| ||||    
T  17623606 aaatcagggtaaggctgcgtacaatacaccaaatggtggaaccccttcccgaatcctgcgtatg 17623669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 230 - 288
Target Start/End: Original strand, 17668044 - 17668102
Alignment:
Q  230 aaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgc 288  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||    
T  17668044 aaatcagggtaaggctgcgtacaatacaccaaatggtggaaccccttctcgaaccctgc 17668102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 36871538 - 36871623
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||       ||| ||||||||||||||||||||| || ||||||    
T  36871538 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggacc-------tgcgtatgcgggagctttagtgcaccgggttgccc 36871623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 22371100 - 22371153
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctg 287  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  22371100 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctg 22371153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 288
Target Start/End: Complemental strand, 12024008 - 12023954
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgc 288  Q
    ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  12024008 cagggtaaggctgcgtacaatacaccaaatggtgggaccccctcccggaccctgc 12023954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 241 - 325
Target Start/End: Complemental strand, 24860070 - 24859992
Alignment:
Q  241 aggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgcc 325  Q
    |||||||||||||||||||||||| | |||||||||| |||||||      ||| ||||||||||||||||||||| ||||||||    
T  24860070 aggctgcgtacaatacaccaaatggtagaaccccttctcggaccc------tgcgtatgcgggagctttagtgcaccggattgcc 24859992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 10543744 - 10543832
Alignment:
Q  234 cagggtaaggctgcgtacaatacacc--aaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    ||||||||||||||||||||||||||  ||||| ||| ||||||||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  10543744 cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 10543832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 14444774 - 14444834
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||| |||| |||||||||||| ||| ||||||||||||||||||| |||||    
T  14444774 cagggtaaggctgtgtacgatacaccaaatggtgggaccccttcccggaccctgcgtatgc 14444834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 25249827 - 25249767
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||||||||||| ||| | ||||||||| ||||||| |||||    
T  25249827 cagggtaaggctgcgtacaatacaccaaatggtgggatcccttcccgaaccctgcgtatgc 25249767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 23397811 - 23397870
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||| |||||||||||||||||| ||| |||||||| |||||||| |||||||    
T  23397811 agggtaaggctacgtacaatacaccaaatggtgggaccccttctcggaccctacatatgc 23397870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 234 - 288
Target Start/End: Complemental strand, 17380326 - 17380272
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgc 288  Q
    |||||||||| || || |||||||||||||||||||||||||||| |||||||||    
T  17380326 cagggtaaggttgtgtgcaatacaccaaatgatggaaccccttcctggaccctgc 17380272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 17896307 - 17896365
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 293  Q
    ||||||||||||||||||||| |||||||| ||| |||||||| |||||||||| ||||    
T  17896307 agggtaaggctgcgtacaatataccaaatggtgggaccccttctcggaccctgcgtatg 17896365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 24890460 - 24890518
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 295  Q
    ||||||||||| ||||||||||||| || ||| ||||||||||||||||||| ||||||    
T  24890460 ggtaaggctgcatacaatacaccaattggtgggaccccttcccggaccctgcgtatgca 24890518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 237 - 295
Target Start/End: Complemental strand, 25079803 - 25079745
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 295  Q
    ||||||| ||||||||||||||| |||| ||| ||||||||||||||||||| ||||||    
T  25079803 ggtaaggatgcgtacaatacaccgaatggtgggaccccttcccggaccctgcgtatgca 25079745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 326
Target Start/End: Original strand, 11514486 - 11514567
Alignment:
Q  238 gtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    ||||||||||||||||||||||||||| ||| | |||||||| |||||      ||| ||||||||||||||||||||| |||||||||    
T  11514486 gtaaggctgcgtacaatacaccaaatggtggga-cccttcccagaccc------tgcgtatgcgggagctttagtgcaccggattgccc 11514567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 32781377 - 32781324
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctg 287  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||| |||||||    
T  32781377 cagggtaagactgcgtacaatacaccaaatggtgggaccccttcccagaccctg 32781324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 14530364 - 14530452
Alignment:
Q  234 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    |||||||||||| ||||||||||||||  |||| ||| ||||||||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  14530364 cagggtaaggctacgtacaatacaccaataatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 14530452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 287
Target Start/End: Complemental strand, 99348 - 99301
Alignment:
Q  240 aaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctg 287  Q
    ||||||||||||||||||||||||| |||||||||||| | |||||||    
T  99348 aaggctgcgtacaatacaccaaatggtggaaccccttctcagaccctg 99301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 4516440 - 4516381
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 293  Q
    ||||| || ||||||||||||||||||| || ||| ||||||||||||||||||| ||||    
T  4516440 cagggcaacgctgcgtacaatacaccaattggtgggaccccttcccggaccctgcgtatg 4516381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 292
Target Start/End: Complemental strand, 13245181 - 13245126
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatat 292  Q
    |||||||||||||||| ||||| ||||| ||| ||||||||||||||| |||||||    
T  13245181 ggtaaggctgcgtacattacactaaatggtgggaccccttcccggaccatgcatat 13245126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 21377162 - 21377103
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 293  Q
    ||||||||||||| ||||||| ||||||||| ||| ||||||||||| ||||||| ||||    
T  21377162 cagggtaaggctgggtacaatgcaccaaatggtgggaccccttcccgaaccctgcgtatg 21377103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 30826083 - 30826141
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||| |||||||||||||||||||| ||||| |||||||| |||||| |||||||    
T  30826083 agggtaaggttgcgtacaatacaccaaatggtggaa-cccttcccagaccctacatatgc 30826141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 5450335 - 5450384
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccct 286  Q
    |||||||||||||||||||||||||| | ||| ||||||||| |||||||    
T  5450335 ggtaaggctgcgtacaatacaccaaagggtgggaccccttcctggaccct 5450384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 293
Target Start/End: Complemental strand, 40762321 - 40762264
Alignment:
Q  236 gggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 293  Q
    |||||||||| |||||||||||||||||| ||| |||| |||| ||||||||| ||||    
T  40762321 gggtaaggctacgtacaatacaccaaatggtgggaccctttcctggaccctgcgtatg 40762264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 24200714 - 24200659
Alignment:
Q  234 cagggtaaggctgcgtacaatacacc--aaatgatggaaccccttcccggaccctg 287  Q
    ||||||||||||||||||||||||||  ||||| ||| | ||||||||||||||||    
T  24200714 cagggtaaggctgcgtacaatacaccaaaaatggtgggaacccttcccggaccctg 24200659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 294
Target Start/End: Original strand, 44643573 - 44643629
Alignment:
Q  238 gtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||||  |||||||| ||| |||||||||| |||||||| |||||    
T  44643573 gtaaggctgcgtacaatgtaccaaatggtgggaccccttcccagaccctgcgtatgc 44643629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 238 - 285
Target Start/End: Complemental strand, 23145783 - 23145736
Alignment:
Q  238 gtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccc 285  Q
    |||||||||||||||||||||||| || ||| |||| |||||||||||    
T  23145783 gtaaggctgcgtacaatacaccaattggtgggaccctttcccggaccc 23145736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 238 - 285
Target Start/End: Complemental strand, 23557573 - 23557526
Alignment:
Q  238 gtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccc 285  Q
    |||||||||||||||||||||||| || ||| |||| |||||||||||    
T  23557573 gtaaggctgcgtacaatacaccaattggtgggaccctttcccggaccc 23557526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 272
Target Start/End: Original strand, 27573669 - 27573704
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaacc 272  Q
    |||||||||||||||||||||||||||| |||||||    
T  27573669 ggtaaggctgcgtacaatacaccaaatggtggaacc 27573704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 234 - 288
Target Start/End: Complemental strand, 44449473 - 44449418
Alignment:
Q  234 cagggtaaggctgcgtacaatacacc-aaatgatggaaccccttcccggaccctgc 288  Q
    |||| ||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  44449473 caggataaggctgcgtacaatacaccaaaatagtgggaccccttcccggaccctgc 44449418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 5841075 - 5841136
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaa--atgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||| ||||||||||||| |||  ||| ||| |||||||||||||||| ||||||||    
T  5841075 agggtaaggatgcgtacaatacatcaataatggtgggaccccttcccggaccccgcatatgc 5841136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 294
Target Start/End: Original strand, 4794871 - 4794908
Alignment:
Q  257 accaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  4794871 accaaatgatgggaccccttcccggatcctgcatatgc 4794908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 26684706 - 26684649
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||| || ||||| ||| ||| ||||||| ||||||| |||||    
T  26684706 ggtaaggctgcgtacaatatactaaatggtgggacctcttcccgaaccctgcgtatgc 26684649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 276
Target Start/End: Complemental strand, 31821431 - 31821390
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaacccctt 276  Q
    ||||||||| || ||||||||||||||||||||| |||||||    
T  31821431 agggtaaggttgtgtacaatacaccaaatgatgggacccctt 31821390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 25641547 - 25641607
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||| | |||||||||||||||||||  ||| ||||||||||| | ||||| |||||    
T  25641547 cagggtaaagttgcgtacaatacaccaaattgtgggaccccttcccgaatcctgcgtatgc 25641607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 40416960 - 40416900
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||| ||||||| |||||||||||||| |||||| |||| ||   |||||||||||||||    
T  40416960 cagggaaaggctgtgtacaatacaccaattgatgggacccttttttggaccctgcatatgc 40416900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 30618 - 30683
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| ||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  30618 taaaacagggtagggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 30683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 235 - 326
Target Start/End: Original strand, 46878 - 46963
Alignment:
Q  235 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 326  Q
    ||||||||| |||||||||||||||||||| ||| ||||||||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  46878 agggtaaggttgcgtacaatacaccaaatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 46963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 24861 - 24801
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||||||||| |||||||||| ||| ||||||||||| ||||||| |||||    
T  24861 cagggtaaggctgcgtacaacacaccaaatggtgggaccccttcccgaaccctgcgtatgc 24801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 43706 - 43764
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaacccc-ttcccggaccctgcatatgc 294  Q
    |||||||||||||||||||||||||||| ||| ||||| ||| ||||||||||||||||    
T  43706 ggtaaggctgcgtacaatacaccaaatggtgggacccctttctcggaccctgcatatgc 43764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 234 - 324
Target Start/End: Original strand, 10856 - 10940
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgc 324  Q
    ||||||| |||||||| |||||||||||||| ||| ||||||||||||||||      ||| |||||||||||||||||||||||| ||||    
T  10856 cagggtagggctgcgtccaatacaccaaatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcactgggttgc 10940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 295
Target Start/End: Complemental strand, 10144 - 10078
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 295  Q
    |||| ||| ||||| ||||||||||||||||||||  ||| ||||||||||||||||||||||||||    
T  10144 taaaacagagtaagactgcgtacaatacaccaaatagtgggaccccttcccggaccctgcatatgca 10078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 295
Target Start/End: Complemental strand, 20472 - 20406
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 295  Q
    |||| ||| ||||| ||||||||||||||||||||  ||| ||||||||||||||||||||||||||    
T  20472 taaaacagagtaagactgcgtacaatacaccaaatagtgggaccccttcccggaccctgcatatgca 20406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 1681 - 1616
Alignment:
Q  229 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||| |||| ||||||||| |||||||||||||||||||| |||||||||||||||| || |||||    
T  1681 taaaacaggataaggctgcatacaatacaccaaatgatgggaccccttcccggacccggcgtatgc 1616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 238 - 294
Target Start/End: Original strand, 11179 - 11235
Alignment:
Q  238 gtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||| |||||||||||||||| ||| || ||||||||||||||||||||||    
T  11179 gtaaggctgcttacaatacaccaaatggtgggacaccttcccggaccctgcatatgc 11235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 3593 - 3650
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    |||||||||||||| |||||||| |||||||| ||||||||||| ||||||| |||||    
T  3593 ggtaaggctgcgtataatacaccgaatgatgggaccccttcccgaaccctgcgtatgc 3650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 13110 - 13053
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||||||||||||||| |||| ||| |||||||||| |||||||| |||||    
T  13110 ggtaaggctgcgtacaatacaccgaatggtgggaccccttcccagaccctgcgtatgc 13053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 72953 - 72896
Alignment:
Q  237 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 294  Q
    ||||||||||| |||||||||||||||| | | ||||||||||||| ||||| |||||    
T  72953 ggtaaggctgcctacaatacaccaaatggtagtaccccttcccggaacctgcgtatgc 72896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 278
Target Start/End: Complemental strand, 35106 - 35062
Alignment:
Q  234 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcc 278  Q
    ||||||||||||||||||||||||||||||| ||| |||| ||||    
T  35106 cagggtaaggctgcgtacaatacaccaaatggtgggaccctttcc 35062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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