View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4766-Insertion-16 (Length: 192)
Name: NF4766-Insertion-16
Description: NF4766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4766-Insertion-16 |
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| [»] chr4 (2 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 13464444 - 13464365
Alignment:
| Q |
119 |
cggcgatggtgtgaaatctgaaacggcgatggtgtgaaatcg------aaggggaacgaagcagaaagaagaagagggac |
192 |
Q |
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| T |
13464444 |
cggcgatggtgtgaaatctgaaacggcgatggtgtgaaatcgacgaccaagaggaacgaagcagaaagaagaagagggac |
13464365 |
T |
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Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 47
Target Start/End: Complemental strand, 13464555 - 13464516
Alignment:
| Q |
8 |
aaaacagaaatagaagagaacgaatacgaagaggtttcgt |
47 |
Q |
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| T |
13464555 |
aaaacaaaaatagaagagaacgaatacgaagaggtttcgt |
13464516 |
T |
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