View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4766_low_12 (Length: 322)
Name: NF4766_low_12
Description: NF4766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4766_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 5747031 - 5746711
Alignment:
| Q |
1 |
cattatgactgaataaagaaatagtattatttttaatacaactcctttgcaacaacataataataattgtggggctatttctctatcatcattgtcattg |
100 |
Q |
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|||||| |||||| |||||||||||| || | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
5747031 |
cattataactgaagaaagaaatagtagtagtgttaatacaactcctttgcaacaacataataataattggggggctatttctctatcatcattgtcattg |
5746932 |
T |
|
| Q |
101 |
catggccaaagtagtaatgctagtgatgagtatgatcataagccaattcttgatataccttgtgatgaaagaaatgaattagggttcgactccggagaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5746931 |
catggccaaagtagtaatgctagtgatgagtatgatcataagccaattcttgatataccttgtgatgaaagaaatgaattagggttcgactccggagaaa |
5746832 |
T |
|
| Q |
201 |
tacttcaccacaggnnnnnnnncttcttcttttcttaatgtttatgtcattaacttgaaaaagttgcaataccgacggaaatatggttagtagtatgggt |
300 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |
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| T |
5746831 |
tacttcaccacaggttttttttcttcttcttttcttaatgtttatgtcattaacttgaaaaagttgcattaccgacagaaatatggttagtagtatgggt |
5746732 |
T |
|
| Q |
301 |
tgaacattgatggagtattat |
321 |
Q |
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||||||||||||||||||||| |
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| T |
5746731 |
tgaacattgatggagtattat |
5746711 |
T |
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