View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4766_low_9 (Length: 352)
Name: NF4766_low_9
Description: NF4766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4766_low_9 |
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Alignment Details
Target: chr5 (Bit Score: 305; Significance: 1e-171; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 11 - 336
Target Start/End: Complemental strand, 32931704 - 32931375
Alignment:
| Q |
11 |
cataggatcacaatggcactaaccaaacatgtcattgacttttccatatacacagaaccacatacagacacaaaacaaaacacagaatgaaaatgcaatg |
110 |
Q |
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| T |
32931704 |
cataggatcacaatggcactaaccaaacatgtcattgacttttccatatacacagaaccacatacagacacaaaacaaaacatagaatgaaaatgcaatg |
32931605 |
T |
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| Q |
111 |
gctatgttgtttgtttgtttgtt----cctataggtacatgatgagagtggttgagaagaaggaatttccacgacacttccttagaaaacaaaatgaaat |
206 |
Q |
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| T |
32931604 |
gctatgttgtttgtttgtttgtttgttcctataggtacatgatgagagtggttgagaagaaggaatttccacgacaattccttagaaaacaaaatgaaat |
32931505 |
T |
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| Q |
207 |
aaaaattgataatatgatttgaatttgcacgtacttcttaaaatggtacgtaatgaatgaatattataaagagttgaaaaagaaccgtgtttgtgaatgg |
306 |
Q |
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| T |
32931504 |
aaaaattgataatatgatttgaatttgcacgtacttcttaaaatggtacgtaatgaatgaatattataaagagttgaaaaagaaccgtgtttgtgaatgg |
32931405 |
T |
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| Q |
307 |
ttaatgaatgatgacaagtacatgtcttct |
336 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
32931404 |
ttaatgaatgatgacaagtacatgtcttct |
32931375 |
T |
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