View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4768-Insertion-16 (Length: 305)
Name: NF4768-Insertion-16
Description: NF4768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4768-Insertion-16 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 8 - 305
Target Start/End: Original strand, 30737622 - 30737919
Alignment:
| Q |
8 |
ccttcactcagatatcagattcctccacttcagcatagagaaagactctatttaagtgtgtcaaatttgcatcaagaaataccttcttgataaatgcaca |
107 |
Q |
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|||||||||| |||||||| || ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |
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| T |
30737622 |
ccttcactcatatatcagactcgtccacttcagcatagagaaagcctctatttaagtgtgtcaaatttacatcaagaaataccttcttgataaatgcaga |
30737721 |
T |
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| Q |
108 |
aacttgttgagattactacgtactcaatacaaaggaaaaatttccttttcaaaataaaaaaccctacaaaatttgtaggtactactccttccaatatgga |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30737722 |
aacttgttgagattactacgtactcaatacaaaggaaaaatttcctcttcaaaataaaaaaccctacaaaatttgtaggtactactccttccaatatgga |
30737821 |
T |
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| Q |
208 |
aactctggttacatttcgagcctgatcctctcttgttataataacctggataaaatgatctttgaaaatccacttcttcaattaacttcaatcccaca |
305 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30737822 |
aactctggttacatttcgagcctgatcctctcttgttataataacctggataaaatgatctttgaaaatccacttcttcaattaacttcaatcccaca |
30737919 |
T |
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