View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4768_high_10 (Length: 249)
Name: NF4768_high_10
Description: NF4768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4768_high_10 |
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Alignment Details
Target: chr1 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 5 - 234
Target Start/End: Original strand, 5231585 - 5231814
Alignment:
| Q |
5 |
ctgattgcaaaactgtagttttcaacacggcaacggtaacacaagataatagaatatgttaaataagtttgtatttaccacgttagatgtttttcgaagt |
104 |
Q |
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| T |
5231585 |
ctgattgcaaaactgtagttttcaacacggcaacggtaacacaagataatagaatatgttaaataagtttgtatttaccacgttagatgtttttcgaagt |
5231684 |
T |
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| Q |
105 |
gtgaacatttataaaattttaccaatgtcatgcaggttaatggacatagcttccataaaaggatgactcccgtggagactacatttgattggcagtcata |
204 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5231685 |
gtgaacatttataaaattttaccaatgtcatgtaggttaatggacatagcttccataaaaggatgactcccgtggagactacatttgattggcagtcata |
5231784 |
T |
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| Q |
205 |
cagtgaagagcctgcctactccagtgatga |
234 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
5231785 |
cagtgaagagcctgcctactccagtgatga |
5231814 |
T |
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