View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4768_high_9 (Length: 251)
Name: NF4768_high_9
Description: NF4768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4768_high_9 |
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Alignment Details
Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 9 - 239
Target Start/End: Original strand, 29878275 - 29878505
Alignment:
| Q |
9 |
gatatgaaacgaacgattattatttacatcatatgaaataagtttgatcatatatttaagaaaaatatataaccaccaaattaaagagggtgaggtgtag |
108 |
Q |
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| T |
29878275 |
gatatgaaacgaatgattattatttacatcatatgaaataagtttgatcatatatttaagaaaaatatataaccaccaaattaaagagggtgaggtgtag |
29878374 |
T |
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| Q |
109 |
actcccgagagaaacacatgagaccacatggaaagcttcttaacttgcaaattggaatatttagactttaagtgagtgtcttttgattaattaaaacctc |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29878375 |
actcccgagagaaacacatgagaccacatggaaagcttcttaacttgcaaattggaatatttagactttaagtgagtgtcttttgattaattaaaacctc |
29878474 |
T |
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| Q |
209 |
tttaattgacctttgtacttactaattactc |
239 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
29878475 |
tttaattgacctttgtacttactaattactc |
29878505 |
T |
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