View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4771-Insertion-12 (Length: 268)
Name: NF4771-Insertion-12
Description: NF4771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4771-Insertion-12 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 8 - 268
Target Start/End: Original strand, 30817020 - 30817280
Alignment:
| Q |
8 |
ccctttccccaactcctcactatcttcgtcaaaagtcatctccttaatctccaaacacttccgaagattctcaagcgcctcttctctcctccccatcgcc |
107 |
Q |
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| T |
30817020 |
ccctttccccaactcctcactatcttcgtcaaaagtcatctccttaatctccaaacacttccgaagattctcaagcgcctcttctctcctccccatcgcc |
30817119 |
T |
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| Q |
108 |
gtcttaacattagccagctcaaattgcacggcatgaagcacaggcctaatatcatcaacacaaacaccctcattctctaacctacccaaaaccctattag |
207 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30817120 |
gtcttaacattagccagctcaaattgcacagcatgaagcacaggcctaatatcatcaacacaaacaccctcattctctaacctacccaaaaccctattag |
30817219 |
T |
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| Q |
208 |
ccttattaagataccctaaactatcactaaacctatttaaaccataattaagactacccat |
268 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30817220 |
ccttattaagataccctaaactatcactaaacctatttaaaccataattaagactacccat |
30817280 |
T |
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