View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4772_low_3 (Length: 501)

Name: NF4772_low_3
Description: NF4772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4772_low_3
NF4772_low_3
[»] chr6 (14 HSPs)
chr6 (10-484)||(6504911-6505385)
chr6 (141-472)||(6516392-6516723)
chr6 (20-484)||(6527634-6528098)
chr6 (10-484)||(6473316-6473790)
chr6 (280-478)||(6457074-6457272)
chr6 (199-484)||(6464953-6465238)
chr6 (16-179)||(6462399-6462562)
chr6 (289-422)||(1828216-1828349)
chr6 (277-407)||(6526069-6526197)
chr6 (275-407)||(1839238-1839370)
chr6 (289-377)||(1827373-1827461)
chr6 (18-128)||(6525810-6525920)
chr6 (358-422)||(13054069-13054133)
chr6 (358-422)||(13062806-13062870)
[»] chr1 (1 HSPs)
chr1 (75-327)||(35244426-35244678)
[»] chr7 (4 HSPs)
chr7 (301-484)||(9665581-9665764)
chr7 (289-350)||(46383131-46383192)
chr7 (289-349)||(3754236-3754296)
chr7 (303-349)||(4045956-4046002)
[»] chr4 (1 HSPs)
chr4 (301-484)||(13536605-13536788)


Alignment Details
Target: chr6 (Bit Score: 439; Significance: 0; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 439; E-Value: 0
Query Start/End: Original strand, 10 - 484
Target Start/End: Original strand, 6504911 - 6505385
Alignment:
Q  10 acatcatcaacatcagaaaacaaatcttcagaaataggagccaatggtataagctgaattcctgtcctagcttctctccattcagctggagcaaaccaaa 109  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6504911 acataatcaacatcagaaaacaaatcttcagaaataggagccaatggtataagctgaattcctgtcctagcttctctccattcaggtggagcaaaccaaa 6505010  T
Q  110 gtccactatctcttttgttattccacacaactcccactatcctattctcttttgtaaactcttcttcatacaatttcccattcttcttaacatgccacca 209  Q
    |||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6505011 gtccactatctcttttattattccacaaaactcccactattctattctcttttgtaaactcttcttcatacaatttcccattcttcttaacatgccacca 6505110  T
Q  210 cattttggttccaagaatttccaatgatgttagggttgatccaatggacacaagttgagaatcaccatatgccattcccatcaatgctgcagcatagtat 309  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6505111 cattttggttccaagaatttccaatgatgttagtgttgatccaatggacacaagttgagaatcaccatatgctattcccatcaatgctgcagcatagtat 6505210  T
Q  310 gcattcacagcttcactagtactctcttgattccttccatctgaaaactcggttagccctccggcccacgaatgcaacttgtaaagatcgaaacacctca 409  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6505211 gcattcacagcttcactagtactctcttgattccttccatctgaaaactcggttagccctccggcccacgaatgcaacttgtaaagatcgaaacacctta 6505310  T
Q  410 aacgcgtataatttgagtttgattctatgcttaagttcataaaatcttccacaagtgaataggcttgagccttat 484  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6505311 aacgcgtataatttgagttcgattctatgcttaagttcataaaatcttccacaagtgaataggcttgagccttat 6505385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 141 - 472
Target Start/End: Complemental strand, 6516723 - 6516392
Alignment:
Q  141 tcccactatcctattctcttttgtaaactcttcttcatacaatttcccattcttcttaacatgccaccacattttggttccaagaatttccaatgatgtt 240  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6516723 tcccactatcctattctcttttgtaaactcttcatcatacaatttcccattctttttaacatgccaccacattttggttccaagaatttccaatgatgtt 6516624  T
Q  241 agggttgatccaatggacacaagttgagaatcaccatatgccattcccatcaatgctgcagcatagtatgcattcacagcttcactagtactctcttgat 340  Q
    || |||||| |||| ||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  6516623 agtgttgatgcaattgacacaagttgaggatcaccatatgccattcccattaaggctgcagcatagtatgcattcacagcttcactagtactctcttgat 6516524  T
Q  341 tccttccatctgaaaactcggttagccctccggcccacgaatgcaacttgtaaagatcgaaacacctcaaacgcgtataatttgagtttgattctatgct 440  Q
     |||||||| |  | | | |||||||||| ||||||||||||| ||| |||||||||||||| |||| |||||||||||||||||||| |||| ||  ||    
T  6516523 accttccatgttcagagttggttagccctacggcccacgaatgtaacatgtaaagatcgaaaaaccttaaacgcgtataatttgagttcgattttaaact 6516424  T
Q  441 taagttcataaaatcttccacaagtgaatagg 472  Q
    |||||||||||| ||||||| |||||||||||    
T  6516423 taagttcataaagtcttccataagtgaatagg 6516392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 20 - 484
Target Start/End: Original strand, 6527634 - 6528098
Alignment:
Q  20 catcagaaaacaaatcttcagaaataggagccaatggtataagctgaattcctgtcctagcttctctccattcagctggagcaaaccaaagtccactatc 119  Q
    |||||||||||||| ||||||||||||| | ||| |||| ||  ||||  ||   ||| ||||||||||||||||| ||||||||| | | |||||| ||    
T  6527634 catcagaaaacaaaacttcagaaataggcgacaagggtaaaacttgaacaccaagccttgcttctctccattcagccggagcaaacgacaatccactgtc 6527733  T
Q  120 tcttttgttattccacacaactcccactatcctattctcttttgtaaactcttcttcatacaatttcccattcttcttaacatgccaccacattttggtt 219  Q
    ||| ||||||  ||| | ||||||||  ||||||||||| |||||||| |||| |||||| |  || || | ||| ||||||||||||||||||||   |    
T  6527734 tctcttgttagaccataaaactcccatgatcctattctcctttgtaaaatctttttcatagagcttaccgtcctttttaacatgccaccacattttctct 6527833  T
Q  220 ccaagaatttccaatgatgttagggttgatccaatggacacaagttgagaatcaccatatgccattcccatcaatgctgcagcatagtatgcattcacag 319  Q
     ||  ||||||||||||||  || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  6527834 gcacaaatttccaatgatgcaagtgttgatccaatggacacaagttgaggatcaccatatgccattcccatcaatgctgaagcatagtatgcatttacag 6527933  T
Q  320 cttcactagtactctcttgattccttccatctgaaaactcggttagccctccggcccacgaatgcaacttgtaaagatcgaaacacctcaaacgcgtata 419  Q
    |||||||| |   |  |||||| |||||||||| ||||||||||| |||||||||||| || ||||||||| ||||||| |||||||| ||||||| |||    
T  6527934 cttcactacttgccatttgattacttccatctgcaaactcggttacccctccggcccatgagtgcaacttgaaaagatcaaaacacctaaaacgcgcata 6528033  T
Q  420 atttgagtttgattctatgcttaagttcataaaatcttccacaagtgaataggcttgagccttat 484  Q
    |||||||||  |     |||| || ||||||||||||||||  | |||||| |||||||||||||    
T  6528034 atttgagttcaaactcgtgctcaaattcataaaatcttccaataatgaatatgcttgagccttat 6528098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 10 - 484
Target Start/End: Complemental strand, 6473790 - 6473316
Alignment:
Q  10 acatcatcaacatcagaaaacaaatcttcagaaataggagccaatggtataagctgaattcctgtcctagcttctctccattcagctggagcaaaccaaa 109  Q
    |||| ||||||||| ||||||||| ||||||||||||||  ||||||||  |||||||||||   ||||  |||| ||||| |||| ||||||||||| |    
T  6473790 acataatcaacatctgaaaacaaaacttcagaaataggaatcaatggtaggagctgaattccaagcctacattctttccatgcagccggagcaaaccata 6473691  T
Q  110 gtccactatctcttttgttattccacacaactcccactatcctattctcttttgtaaactcttcttcatacaatttcccattcttctta-acatgccacc 208  Q
     |||||| ||||| ||||||  ||| | ||||||||  |||||||||||||||||||| ||||| ||||| |  ||| | | ||||||  ||||||||||    
T  6473690 atccactgtctctcttgttagaccatagaactcccatcatcctattctcttttgtaaaatcttcctcatagagattctc-tccttcttttacatgccacc 6473592  T
Q  209 acattttggttccaagaatttccaatgatgttagggttgatccaatggacacaagttgagaatcaccatatgccattcccatcaatgctgcagcatagta 308  Q
    ||||||| |   ||||||||||||||||||| || || ||| || | |     ||||  | |||   ||||||||| || ||||| ||||||| ||||||    
T  6473591 acattttagcagcaagaatttccaatgatgtaagtgtcgatgcattcgctgtgagttctgcatcgttatatgccataccgatcaacgctgcagaatagta 6473492  T
Q  309 tgcattcacagcttcactagtactctcttgattccttccatctgaaaactcggttagccctccggcccacgaatgcaacttgtaaagatcgaaacacctc 408  Q
    ||||||||| |||||||||||||||||||| || |||||||| | ||||||||||| |||||||||||| |||||||  ||||||||||| ||||||||     
T  6473491 tgcattcacggcttcactagtactctcttggtttcttccatccgcaaactcggttaaccctccggcccaagaatgcagtttgtaaagatcaaaacacctt 6473392  T
Q  409 aaacgcgtataatttgagtttgattctatgcttaagttcataaaatcttccacaagtgaataggcttgagccttat 484  Q
    ||| | ||||||||||| || || | | |||| ||| |||||||||||||||  |||| ||||||||||| |||||    
T  6473391 aaaggagtataatttgaattcgagtttttgctcaaggtcataaaatcttccatgagtgcataggcttgaggcttat 6473316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 280 - 478
Target Start/End: Original strand, 6457074 - 6457272
Alignment:
Q  280 gccattcccatcaatgctgcagcatagtatgcattcacagcttcactagtactctcttgattccttccatctgaaaactcggttagccctccggcccacg 379  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||| |||| ||||| ||||| |    
T  6457074 gccattcccatcaatgctgcagcatagtatgcattcacagcttcactagtactctcttgatttcttccatctgcaaattcgattagtcctccagcccaag 6457173  T
Q  380 aatgcaacttgtaaagatcgaaacacctcaaacgcgtataatttgagtttgattctatgcttaagttcataaaatcttccacaagtgaataggcttgag 478  Q
    |||| || || ||||||||||||||||| ||||| ||||||||||||||||||| | | | ||||||||  |||||| |||  |||||||| |||||||    
T  6457174 aatgaaatttataaagatcgaaacaccttaaacgtgtataatttgagtttgattttcttcctaagttcaggaaatctgccatgagtgaataagcttgag 6457272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 199 - 484
Target Start/End: Original strand, 6464953 - 6465238
Alignment:
Q  199 acatgccaccacattttggttccaagaatttccaatgatgttagggttgatccaatggacacaagttgagaatcaccatatgccattcccatcaatgctg 298  Q
    ||||||||||||||||  | | || |||||||||||||||| || || |||||||  |  || || ||||  || ||||||||||  |||||||| ||||    
T  6464953 acatgccaccacatttgagctgcatgaatttccaatgatgtaagtgtcgatccaactgcaacgagatgagtgtcgccatatgccaaacccatcaaagctg 6465052  T
Q  299 cagcatagtatgcattcacagcttcactagtactctcttgattccttccatctgaaaactcggttagccctccggcccacgaatgcaacttgtaaagatc 398  Q
    | | ||||||||||||||||||||||||||||||||||||||| |||||||||   ||||| |||| ||||||||||||||||||||| ||  |||||||    
T  6465053 ctgaatagtatgcattcacagcttcactagtactctcttgatttcttccatctccgaactcagttaaccctccggcccacgaatgcaatttaaaaagatc 6465152  T
Q  399 gaaacacctcaaacgcgtataatttgagtttgattctatgcttaagttcataaaatcttccacaagtgaataggcttgagccttat 484  Q
    ||||||||| | ||| || ||||| ||||| |  | | |||| ||||||||||||||  |||  |||||||| ||||||| |||||    
T  6465153 gaaacaccttagacgggtgtaattcgagttcggatttctgctcaagttcataaaatcagccatgagtgaataagcttgaggcttat 6465238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 179
Target Start/End: Complemental strand, 6462562 - 6462399
Alignment:
Q  16 tcaacatcagaaaacaaatcttcagaaataggagccaatggtataagctgaattcctgtcctagcttctctccattcagctggagcaaaccaaagtccac 115  Q
    ||||||||||| |||||  |||||||||||||| |||||||||  |||||||||||    |||  ||||||  |||||| ||||||||||||||||||||    
T  6462562 tcaacatcagagaacaatacttcagaaataggaaccaatggtaagagctgaattccaagtctacattctctatattcaggtggagcaaaccaaagtccac 6462463  T
Q  116 tatctcttttgttattccacacaactcccactatcctattctcttttgtaaactcttcttcata 179  Q
    | ||||| ||||||  ||| | || |||||  ||||| ||||||||||||||||||||| ||||    
T  6462462 tttctctcttgttagaccatagaaatcccatgatcctgttctcttttgtaaactcttctgcata 6462399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 289 - 422
Target Start/End: Complemental strand, 1828349 - 1828216
Alignment:
Q  289 atcaatgctgcagcatagtatgcattcacagcttcactagtactctcttgattccttccatctgaaaactcggttagccctccggcccacgaatgcaact 388  Q
    ||||| ||||| | ||||||||||||||| || |||||||| ||||||||||| || ||||| |  || || ||||||||||||||||| || || || |    
T  1828349 atcaaggctgcggaatagtatgcattcactgcatcactagtgctctcttgatttctaccatcagcgaattctgttagccctccggcccaagagtgtaatt 1828250  T
Q  389 tgtaaagatcgaaacacctcaaacgcgtataatt 422  Q
    | ||||||||||||||||||| || ||| |||||    
T  1828249 tataaagatcgaaacacctcagacacgtgtaatt 1828216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 407
Target Start/End: Original strand, 6526069 - 6526197
Alignment:
Q  277 tatgccattcccatcaatgctgcagcatagtatgcattcacagcttcactagtactctcttgattccttccatctgaaaactcggttagccctccggccc 376  Q
    ||||||||||||||||| ||||| ||||| || |||||| |||||||||| |||||||||||||| |||||||| |  || || ||||||||||| ||||    
T  6526069 tatgccattcccatcaaggctgc-gcataataagcattc-cagcttcactggtactctcttgatttcttccatcagtgaattctgttagccctccagccc 6526166  T
Q  377 acgaatgcaacttgtaaagatcgaaacacct 407  Q
    | || || || || || ||||||||||||||    
T  6526167 aagagtgtaatttatacagatcgaaacacct 6526197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 407
Target Start/End: Complemental strand, 1839370 - 1839238
Alignment:
Q  275 catatgccattcccatcaatgctgcagcatagtatgcattcacagcttcactagtactctcttgattccttccatctgaaaactcggttagccctccggc 374  Q
    ||||| |||| || ||||| |||| || ||||||||||||||| | ||||||||| || |||||||| || ||||| |  ||||| ||||||||||||||    
T  1839370 catattccataccaatcaaagctgaagaatagtatgcattcactgattcactagtgctatcttgatttctaccatcagcgaactctgttagccctccggc 1839271  T
Q  375 ccacgaatgcaacttgtaaagatcgaaacacct 407  Q
    ||| || || || || |||||||| ||||||||    
T  1839270 ccaagagtgtaatttataaagatctaaacacct 1839238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 289 - 377
Target Start/End: Complemental strand, 1827461 - 1827373
Alignment:
Q  289 atcaatgctgcagcatagtatgcattcacagcttcactagtactctcttgattccttccatctgaaaactcggttagccctccggccca 377  Q
    ||||| ||||||| ||| ||||||||||  ||||||||||  ||||||||||| |||||||| |  || || ||||||||||| |||||    
T  1827461 atcaaggctgcagaataatatgcattcattgcttcactagcgctctcttgatttcttccatcagtgaattcagttagccctccagccca 1827373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 6525810 - 6525920
Alignment:
Q  18 aacatcagaaaacaaatcttcagaaataggagccaatggtataagctgaattcctgtcctagcttctctccattcagctggagcaaaccaaagtccacta 117  Q
    ||||||||| |||||  |||||||||| |||  ||||||||  |||||||| ||   ||||  |||| |||||||||||||| ||||||| |  |||||     
T  6525810 aacatcagagaacaagacttcagaaattggaagcaatggtaagagctgaatcccaagcctacattctttccattcagctggaccaaaccataaaccactg 6525909  T
Q  118 tctcttttgtt 128  Q
    |||||||||||    
T  6525910 tctcttttgtt 6525920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 358 - 422
Target Start/End: Complemental strand, 13054133 - 13054069
Alignment:
Q  358 tcggttagccctccggcccacgaatgcaacttgtaaagatcgaaacacctcaaacgcgtataatt 422  Q
    ||||||| |||||| | ||| |||||||| || ||||||||||||| ||||||||| || |||||    
T  13054133 tcggttaaccctcccgtccatgaatgcaatttataaagatcgaaacccctcaaacgtgtttaatt 13054069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 358 - 422
Target Start/End: Complemental strand, 13062870 - 13062806
Alignment:
Q  358 tcggttagccctccggcccacgaatgcaacttgtaaagatcgaaacacctcaaacgcgtataatt 422  Q
    ||||||| ||||||  |||| |||||||| || ||||||||||||| ||||||||| || |||||    
T  13062870 tcggttaaccctcccacccatgaatgcaatttataaagatcgaaacccctcaaacgtgtttaatt 13062806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 8e-50; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 75 - 327
Target Start/End: Complemental strand, 35244678 - 35244426
Alignment:
Q  75 cctagcttctctccattcagctggagcaaaccaaagtccactatctcttttgttattccacacaactcccactatcctattctcttttgtaaactcttct 174  Q
    |||||||| | |||| |||| |||||||||| | || |||||||| || || |||  ||||| ||||||||  |||||||||||||||||||| |||| |    
T  35244678 cctagcttttttccactcagttggagcaaacaagagaccactatccctcttattagaccacaaaactcccatgatcctattctcttttgtaaaatctttt 35244579  T
Q  175 tcatacaatttcccattcttcttaacatgccaccacattttggttccaagaatttccaatgatgttagggttgatccaatggacacaagttgagaatcac 274  Q
    |||||||  || ||| |||| |||||||||||||||| ||| |   ||  ||||||||||||||  || ||||||||||||||||||| ||||  |||||    
T  35244578 tcatacatatttccactctttttaacatgccaccacaatttagcagcacaaatttccaatgatgcaagtgttgatccaatggacacaatttgaccatcac 35244479  T
Q  275 catatgccattcccatcaatgctgcagcatagtatgcattcacagcttcacta 327  Q
    |||| |||||||||||||||| ||| |||||||||||||||||||||||||||    
T  35244478 cataagccattcccatcaatgatgcggcatagtatgcattcacagcttcacta 35244426  T

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Target: chr7 (Bit Score: 56; Significance: 5e-23; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 301 - 484
Target Start/End: Complemental strand, 9665764 - 9665581
Alignment:
Q  301 gcatagtatgcattcacagcttcactagtactctcttgattccttccatctgaaaactcggttagccctccggcccacgaatgcaacttgtaaagatcga 400  Q
    |||||||||||||| | ||||||||| || |  |  ||||  ||||| |||| ||||||  |||  ||||| ||||| ||||||| |||||||||||| |    
T  9665764 gcatagtatgcattaatagcttcactcgttcctttctgatatcttccttctggaaactcttttaatcctcctgcccatgaatgcagcttgtaaagatcaa 9665665  T
Q  401 aacacctcaaacgcgtataatttgagtttgattctatgcttaagttcataaaatcttccacaagtgaataggcttgagccttat 484  Q
    |||||| ||||||||| ||||| | ||||||   | ||||||||||||  |||||||||| ||||||||||||||||| |||||    
T  9665664 aacaccgcaaacgcgtgtaattagggtttgaacatgtgcttaagttcacgaaatcttccataagtgaataggcttgaggcttat 9665581  T

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Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 46383131 - 46383192
Alignment:
Q  289 atcaatgctgcagcatagtatgcattcacagcttcactagtactctcttgattccttccatc 350  Q
    ||||| ||||||| |||||||||||||| || |||||||||||||| |||||| ||||||||    
T  46383131 atcaaagctgcagaatagtatgcattcaaagtttcactagtactcttttgatttcttccatc 46383192  T

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Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 289 - 349
Target Start/End: Complemental strand, 3754296 - 3754236
Alignment:
Q  289 atcaatgctgcagcatagtatgcattcacagcttcactagtactctcttgattccttccat 349  Q
    ||||||||||| | ||| ||||||||||| |||||||| | ||| ||||||||||||||||    
T  3754296 atcaatgctgctgaataatatgcattcactgcttcacttgaactttcttgattccttccat 3754236  T

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Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 349
Target Start/End: Original strand, 4045956 - 4046002
Alignment:
Q  303 atagtatgcattcacagcttcactagtactctcttgattccttccat 349  Q
    |||||| ||||||||||||||||||| ||| |||||||| |||||||    
T  4045956 atagtacgcattcacagcttcactagaactttcttgatttcttccat 4046002  T

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Target: chr4 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 301 - 484
Target Start/End: Complemental strand, 13536788 - 13536605
Alignment:
Q  301 gcatagtatgcattcacagcttcactagtactctcttgattccttccatctgaaaactcggttagccctccggcccacgaatgcaacttgtaaagatcga 400  Q
    |||||||||||||| | ||||||||| || |  |  ||||  ||||| |||| ||||||  |||  ||||| ||||| ||||||| |||||||||||| |    
T  13536788 gcatagtatgcattaatagcttcactcgttcctttctgatatcttccttctggaaactcttttaatcctcctgcccatgaatgcagcttgtaaagatcaa 13536689  T
Q  401 aacacctcaaacgcgtataatttgagtttgattctatgcttaagttcataaaatcttccacaagtgaataggcttgagccttat 484  Q
    |||||| ||||||||| ||||| | ||||||   | ||||||||||||  |||||||||| ||||||||||||||||| |||||    
T  13536688 aacaccgcaaacgcgtgtaattagggtttgaacatgtgcttaagttcacgaaatcttccataagtgaataggcttgaggcttat 13536605  T

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