View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4773_high_10 (Length: 235)

Name: NF4773_high_10
Description: NF4773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4773_high_10
NF4773_high_10
[»] chr3 (47 HSPs)
chr3 (113-224)||(42771985-42772094)
chr3 (1-86)||(42772123-42772206)
chr3 (1-86)||(40858656-40858739)
chr3 (4-86)||(21090144-21090224)
chr3 (8-86)||(44412452-44412528)
chr3 (1-86)||(41414169-41414252)
chr3 (1-85)||(18086050-18086133)
chr3 (1-86)||(34641083-34641164)
chr3 (1-86)||(26135888-26135971)
chr3 (2-86)||(48683703-48683786)
chr3 (4-86)||(10943687-10943767)
chr3 (1-86)||(17474276-17474359)
chr3 (1-86)||(24253813-24253896)
chr3 (1-86)||(42699682-42699765)
chr3 (1-86)||(8432329-8432412)
chr3 (8-86)||(46978518-46978594)
chr3 (2-86)||(36727268-36727349)
chr3 (23-86)||(16884064-16884124)
chr3 (1-71)||(54985763-54985838)
chr3 (114-167)||(44412357-44412410)
chr3 (119-167)||(24560213-24560261)
chr3 (169-217)||(42770051-42770099)
chr3 (113-161)||(44412555-44412603)
chr3 (1-64)||(55428492-55428553)
chr3 (119-166)||(5903546-5903593)
chr3 (16-86)||(27197734-27197802)
chr3 (113-168)||(27197843-27197898)
chr3 (119-166)||(34641190-34641237)
chr3 (6-68)||(45663220-45663279)
chr3 (126-168)||(21773777-21773819)
chr3 (119-165)||(25655172-25655218)
chr3 (122-167)||(24253717-24253762)
chr3 (123-159)||(31664391-31664427)
chr3 (123-159)||(31931969-31932005)
chr3 (113-160)||(21090265-21090312)
chr3 (121-159)||(55428581-55428619)
chr3 (124-165)||(6803406-6803447)
chr3 (116-165)||(8432259-8432308)
chr3 (123-168)||(9312471-9312516)
chr3 (120-165)||(17474407-17474452)
chr3 (45-86)||(18654712-18654753)
chr3 (120-165)||(18654802-18654847)
chr3 (45-86)||(54996792-54996833)
chr3 (119-163)||(28582709-28582753)
chr3 (125-165)||(41110527-41110567)
chr3 (113-165)||(41414076-41414128)
chr3 (46-86)||(46204977-46205017)
[»] chr8 (33 HSPs)
chr8 (1-86)||(43732778-43732861)
chr8 (2-86)||(12022214-12022296)
chr8 (1-85)||(16024246-16024328)
chr8 (1-86)||(8671862-8671947)
chr8 (1-86)||(20472762-20472845)
chr8 (1-85)||(34196402-34196483)
chr8 (1-76)||(8815211-8815284)
chr8 (1-84)||(30365223-30365304)
chr8 (1-86)||(9933332-9933415)
chr8 (1-86)||(40633059-40633142)
chr8 (1-65)||(29937614-29937676)
chr8 (3-86)||(6453275-6453356)
chr8 (7-86)||(43826423-43826500)
chr8 (5-83)||(39449398-39449474)
chr8 (113-166)||(43732676-43732729)
chr8 (9-84)||(9434377-9434450)
chr8 (113-167)||(12022337-12022391)
chr8 (124-163)||(4247725-4247764)
chr8 (119-165)||(8815341-8815387)
chr8 (119-165)||(31543070-31543116)
chr8 (17-86)||(38198135-38198202)
chr8 (24-80)||(22591501-22591555)
chr8 (119-163)||(31543272-31543316)
chr8 (119-163)||(43732887-43732931)
chr8 (120-163)||(2248452-2248495)
chr8 (121-164)||(7394663-7394706)
chr8 (121-163)||(9718681-9718723)
chr8 (123-165)||(9933238-9933280)
chr8 (119-165)||(41103502-41103548)
chr8 (120-161)||(16024155-16024196)
chr8 (1-85)||(24243118-24243199)
chr8 (45-86)||(26167847-26167888)
chr8 (45-85)||(27483652-27483692)
[»] chr7 (53 HSPs)
chr7 (1-85)||(33519140-33519222)
chr7 (1-85)||(28074173-28074255)
chr7 (2-86)||(21857438-21857520)
chr7 (5-86)||(3215934-3216013)
chr7 (1-86)||(35422055-35422138)
chr7 (1-86)||(37620865-37620948)
chr7 (1-86)||(39646560-39646643)
chr7 (4-76)||(36267626-36267696)
chr7 (5-85)||(48015299-48015377)
chr7 (1-86)||(48881628-48881711)
chr7 (113-166)||(28074100-28074153)
chr7 (1-85)||(37925933-37926015)
chr7 (23-85)||(12670928-12670988)
chr7 (5-86)||(48013593-48013673)
chr7 (4-86)||(2087812-2087896)
chr7 (119-168)||(37925836-37925885)
chr7 (3-86)||(16833786-16833867)
chr7 (1-86)||(3143571-3143658)
chr7 (119-165)||(39856065-39856111)
chr7 (118-167)||(1051697-1051746)
chr7 (1-86)||(8122235-8122322)
chr7 (118-163)||(25887192-25887237)
chr7 (1-74)||(31364115-31364183)
chr7 (114-163)||(36267748-36267797)
chr7 (120-165)||(47391057-47391102)
chr7 (118-168)||(34228518-34228568)
chr7 (113-163)||(39646469-39646519)
chr7 (118-163)||(13770948-13770993)
chr7 (118-167)||(18231785-18231834)
chr7 (119-163)||(33519248-33519292)
chr7 (119-163)||(36267553-36267597)
chr7 (114-161)||(37926036-37926083)
chr7 (119-165)||(4833529-4833575)
chr7 (120-162)||(31571671-31571713)
chr7 (119-169)||(40282191-40282241)
chr7 (121-163)||(41496957-41496999)
chr7 (121-163)||(48881558-48881600)
chr7 (1-65)||(7791831-7791893)
chr7 (124-165)||(13771151-13771192)
chr7 (45-86)||(18063673-18063714)
chr7 (44-85)||(20393693-20393734)
chr7 (116-161)||(23116425-23116470)
chr7 (113-166)||(33519045-33519098)
chr7 (45-86)||(33655220-33655261)
chr7 (120-161)||(37620776-37620817)
chr7 (120-157)||(41008188-41008225)
chr7 (128-165)||(48881758-48881795)
chr7 (125-165)||(10315839-10315879)
chr7 (117-161)||(18127433-18127476)
chr7 (119-163)||(28074308-28074352)
chr7 (124-160)||(31364249-31364285)
chr7 (131-167)||(37417835-37417871)
chr7 (119-163)||(47390855-47390899)
[»] chr2 (41 HSPs)
chr2 (4-86)||(45257398-45257478)
chr2 (1-86)||(15085770-15085853)
chr2 (8-86)||(33265697-33265773)
chr2 (1-86)||(31061450-31061533)
chr2 (1-86)||(45098260-45098343)
chr2 (8-85)||(31928121-31928196)
chr2 (1-86)||(34187666-34187751)
chr2 (1-86)||(35325360-35325443)
chr2 (2-76)||(36052158-36052230)
chr2 (4-85)||(1052828-1052907)
chr2 (5-74)||(3094427-3094494)
chr2 (2-85)||(42813712-42813793)
chr2 (4-86)||(2381060-2381140)
chr2 (1-75)||(8554369-8554441)
chr2 (1-81)||(9313079-9313161)
chr2 (4-86)||(21502124-21502204)
chr2 (114-163)||(8554446-8554495)
chr2 (4-86)||(42296376-42296456)
chr2 (119-163)||(17379846-17379890)
chr2 (113-165)||(31061357-31061409)
chr2 (119-163)||(35736175-35736219)
chr2 (119-165)||(23748295-23748341)
chr2 (113-167)||(35736381-35736435)
chr2 (119-161)||(36046401-36046443)
chr2 (119-168)||(9426980-9427029)
chr2 (121-165)||(17380043-17380087)
chr2 (119-163)||(22356204-22356248)
chr2 (123-163)||(31795968-31796008)
chr2 (119-167)||(41778769-41778817)
chr2 (113-165)||(45257305-45257357)
chr2 (5-44)||(22356134-22356173)
chr2 (120-163)||(36347742-36347785)
chr2 (128-163)||(39732937-39732972)
chr2 (113-167)||(3094547-3094601)
chr2 (121-167)||(15224896-15224942)
chr2 (113-163)||(17334006-17334056)
chr2 (116-166)||(31795766-31795816)
chr2 (45-86)||(41778864-41778905)
chr2 (114-169)||(2380986-2381042)
chr2 (121-161)||(16713494-16713534)
chr2 (119-163)||(42296503-42296547)
[»] chr5 (42 HSPs)
chr5 (1-86)||(33744263-33744346)
chr5 (4-86)||(10043343-10043423)
chr5 (1-86)||(8551488-8551571)
chr5 (1-86)||(34980901-34980984)
chr5 (1-86)||(10204667-10204750)
chr5 (1-86)||(40305735-40305818)
chr5 (1-86)||(15986694-15986777)
chr5 (5-86)||(21581038-21581117)
chr5 (1-63)||(6597860-6597920)
chr5 (118-168)||(14245083-14245133)
chr5 (1-85)||(6382419-6382501)
chr5 (22-86)||(10043100-10043162)
chr5 (2-85)||(12036007-12036087)
chr5 (119-166)||(13634708-13634755)
chr5 (119-169)||(14245246-14245296)
chr5 (119-163)||(16938479-16938523)
chr5 (119-167)||(26414889-26414937)
chr5 (114-166)||(40305860-40305912)
chr5 (16-86)||(5688504-5688572)
chr5 (118-169)||(5688589-5688640)
chr5 (119-166)||(7544133-7544180)
chr5 (119-162)||(13634911-13634954)
chr5 (118-161)||(42681450-42681493)
chr5 (123-165)||(20147074-20147116)
chr5 (123-161)||(34980812-34980850)
chr5 (113-166)||(10204573-10204626)
chr5 (119-160)||(11757103-11757144)
chr5 (116-165)||(12035934-12035983)
chr5 (116-169)||(15986618-15986671)
chr5 (113-166)||(15986818-15986871)
chr5 (126-167)||(40815293-40815334)
chr5 (119-167)||(1658013-1658061)
chr5 (119-159)||(2550552-2550592)
chr5 (113-161)||(8551612-8551660)
chr5 (113-165)||(10043250-10043302)
chr5 (125-165)||(13298269-13298309)
chr5 (120-163)||(10476229-10476272)
chr5 (116-163)||(34981007-34981054)
chr5 (119-165)||(11436937-11436983)
chr5 (113-166)||(33744387-33744440)
chr5 (120-160)||(12600703-12600743)
chr5 (123-163)||(40305670-40305710)
[»] chr4 (51 HSPs)
chr4 (1-86)||(22186810-22186893)
chr4 (2-86)||(43961501-43961583)
chr4 (4-86)||(4437498-4437578)
chr4 (2-82)||(7977567-7977645)
chr4 (5-86)||(17182557-17182638)
chr4 (1-84)||(37761557-37761638)
chr4 (1-86)||(47846125-47846208)
chr4 (1-85)||(54576397-54576479)
chr4 (2-86)||(55080670-55080752)
chr4 (2-86)||(14539363-14539445)
chr4 (1-60)||(5825013-5825070)
chr4 (1-84)||(9030309-9030390)
chr4 (113-168)||(44145768-44145823)
chr4 (1-86)||(29993841-29993924)
chr4 (4-86)||(34995142-34995220)
chr4 (119-166)||(49735465-49735512)
chr4 (4-86)||(51329887-51329966)
chr4 (119-166)||(56135746-56135793)
chr4 (5-74)||(11089619-11089686)
chr4 (1-66)||(44145842-44145905)
chr4 (1-76)||(54001176-54001246)
chr4 (45-86)||(56135840-56135881)
chr4 (119-163)||(49735692-49735736)
chr4 (119-163)||(54320634-54320678)
chr4 (119-166)||(31348521-31348568)
chr4 (122-165)||(54935065-54935108)
chr4 (123-165)||(1968563-1968605)
chr4 (119-165)||(6938447-6938493)
chr4 (119-165)||(7977697-7977743)
chr4 (119-165)||(37711136-37711182)
chr4 (119-160)||(46007901-46007942)
chr4 (119-163)||(37711323-37711367)
chr4 (121-165)||(41174547-41174591)
chr4 (4-59)||(51075215-51075268)
chr4 (119-163)||(54935269-54935313)
chr4 (116-163)||(17182682-17182729)
chr4 (120-163)||(26166937-26166980)
chr4 (122-165)||(53260716-53260759)
chr4 (119-161)||(47846256-47846298)
chr4 (123-165)||(54320433-54320475)
chr4 (45-86)||(5730942-5730983)
chr4 (120-165)||(5731032-5731077)
chr4 (1-84)||(21694960-21695040)
chr4 (45-86)||(27735836-27735877)
chr4 (45-86)||(37711234-37711275)
chr4 (131-163)||(4437626-4437658)
chr4 (129-165)||(14539486-14539522)
chr4 (129-165)||(29798286-29798322)
chr4 (119-163)||(37761664-37761708)
chr4 (119-163)||(47433909-47433953)
chr4 (23-86)||(55510261-55510322)
[»] chr1 (40 HSPs)
chr1 (8-86)||(51303461-51303537)
chr1 (1-86)||(1085560-1085643)
chr1 (4-86)||(25268355-25268435)
chr1 (1-86)||(47071142-47071225)
chr1 (2-86)||(33643359-33643441)
chr1 (1-65)||(35512909-35512971)
chr1 (1-85)||(20607311-20607390)
chr1 (17-86)||(35927904-35927971)
chr1 (1-85)||(13386989-13387071)
chr1 (4-86)||(2506630-2506710)
chr1 (4-86)||(40709365-40709445)
chr1 (1-85)||(40287325-40287407)
chr1 (116-163)||(40709292-40709339)
chr1 (119-164)||(26324013-26324058)
chr1 (118-163)||(30010332-30010377)
chr1 (113-166)||(51303381-51303434)
chr1 (1-86)||(1344639-1344722)
chr1 (123-165)||(12234008-12234050)
chr1 (23-84)||(17622630-17622689)
chr1 (119-165)||(20607417-20607463)
chr1 (113-163)||(33643268-33643318)
chr1 (119-165)||(41498402-41498448)
chr1 (6-86)||(525175-525252)
chr1 (119-156)||(2859132-2859169)
chr1 (45-86)||(50079496-50079537)
chr1 (116-168)||(1085484-1085536)
chr1 (119-163)||(35349662-35349706)
chr1 (113-165)||(35927812-35927864)
chr1 (119-166)||(30010532-30010579)
chr1 (119-166)||(38510094-38510141)
chr1 (113-163)||(1085684-1085734)
chr1 (119-161)||(12234210-12234252)
chr1 (119-168)||(40094928-40094977)
chr1 (2-86)||(52707736-52707818)
chr1 (119-163)||(2858932-2858976)
chr1 (120-160)||(20576136-20576176)
chr1 (123-163)||(20607223-20607263)
chr1 (119-159)||(35512997-35513037)
chr1 (119-163)||(38509894-38509938)
chr1 (23-86)||(44210997-44211058)
[»] chr6 (30 HSPs)
chr6 (1-85)||(15353456-15353537)
chr6 (1-86)||(15323316-15323399)
chr6 (5-86)||(26318396-26318475)
chr6 (1-86)||(4097305-4097388)
chr6 (4-85)||(9051607-9051686)
chr6 (4-73)||(31799025-31799092)
chr6 (1-73)||(15373669-15373739)
chr6 (1-86)||(3841176-3841260)
chr6 (113-165)||(23090993-23091045)
chr6 (119-165)||(9721136-9721182)
chr6 (1-86)||(25468469-25468552)
chr6 (119-168)||(14515468-14515517)
chr6 (121-165)||(9051734-9051778)
chr6 (4-71)||(10293354-10293419)
chr6 (121-165)||(10818227-10818271)
chr6 (118-165)||(9719029-9719076)
chr6 (119-165)||(30487304-30487350)
chr6 (119-169)||(31849104-31849154)
chr6 (4-73)||(34176644-34176711)
chr6 (123-160)||(4097717-4097754)
chr6 (128-168)||(4097230-4097270)
chr6 (124-163)||(15323225-15323264)
chr6 (124-163)||(15353364-15353403)
chr6 (119-160)||(19278237-19278278)
chr6 (45-86)||(29692969-29693010)
chr6 (122-162)||(9719233-9719273)
chr6 (119-163)||(12811180-12811224)
chr6 (113-161)||(25468585-25468633)
chr6 (45-81)||(28477076-28477112)
chr6 (45-85)||(32926737-32926777)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-85)||(184698-184781)
[»] scaffold0071 (1 HSPs)
scaffold0071 (3-85)||(52977-53057)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-86)||(242307-242390)
[»] scaffold0240 (2 HSPs)
scaffold0240 (4-76)||(17641-17711)
scaffold0240 (122-168)||(17741-17787)
[»] scaffold0026 (3 HSPs)
scaffold0026 (1-85)||(1467-1549)
scaffold0026 (120-160)||(1175-1215)
scaffold0026 (113-165)||(1592-1644)
[»] scaffold0095 (1 HSPs)
scaffold0095 (5-83)||(8241-8317)
[»] scaffold0119 (1 HSPs)
scaffold0119 (1-86)||(37474-37557)
[»] scaffold1414 (1 HSPs)
scaffold1414 (4-76)||(402-473)
[»] scaffold0096 (1 HSPs)
scaffold0096 (119-163)||(6584-6628)
[»] scaffold0067 (1 HSPs)
scaffold0067 (119-165)||(39390-39436)
[»] scaffold0198 (1 HSPs)
scaffold0198 (120-160)||(3150-3190)
[»] scaffold0006 (1 HSPs)
scaffold0006 (23-86)||(81503-81564)


Alignment Details
Target: chr3 (Bit Score: 93; Significance: 2e-45; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 42772094 - 42771985
Alignment:
Q  113 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttagagagttttctgcttctgctttctcaccttcagctgcagaaccttct 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||||||||||||||    
T  42772094 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacctttagag--ttttctgcttccgctttctcaccttcagctgcagaaccttct 42771997  T
Q  213 ttaccgtttcat 224  Q
    ||||||||||||    
T  42771996 ttaccgtttcat 42771985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 42772206 - 42772123
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||    
T  42772206 gacattataaaatgattttttgaaaattgaattaacaacatg--ataaatgatcatataatacttcaaaaacacttaatttatttt 42772123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 40858739 - 40858656
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||  |||||||||    
T  40858739 gacattataaaatgatcttttgaaaattgaattaacaacatg--ataaatgatcatataatacttcaaaaacactaaatttatttt 40858656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 21090144 - 21090224
Alignment:
Q  4 attataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||| |||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||| |||||||||    
T  21090144 attataaaacgattttttgaaaattgaattaacaacatgatat--attatcatataatacttcaaaaacacttaatttatttt 21090224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 44412528 - 44412452
Alignment:
Q  8 taaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||| |||||||||    
T  44412528 taaaatgattttttgaaaattgaattaacaacatg--ataaatcatcatataatacttcaaaaacacttaatttatttt 44412452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 41414252 - 41414169
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||||||||||| ||||||||| |||||||||||  |||||||||||||||||||||||||||| ||| |||||||||    
T  41414252 gacattataaaatgatttttagaaaattgagttaacaacatg--ataaatgatcatataatacttcaaaaacgcttgatttatttt 41414169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 18086050 - 18086133
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 85  Q
    |||||||||||||| ||||| |||||||||||||||||||| ||| ||||||||||| |||||||||||||||||| ||||||||    
T  18086050 gacattataaaatgttttttagaaaattgaattaacaacataata-aaatgatcataaaatacttcaaaaacacttaatttattt 18086133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 34641164 - 34641083
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  34641164 gacattataaaatgattta--gaaaattgaattaacaacatgata--aatgatcatataatacttcaaaaacacttaatttatttt 34641083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 26135971 - 26135888
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||| |||||||||||||||||||||||| |||  |||||| || |||||||||||||||||||||| |||||||||    
T  26135971 gacattataaaataattttttgaaaattgaattaacaatatg--ataaataattatataatacttcaaaaacacttaatttatttt 26135888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 48683786 - 48683703
Alignment:
Q  2 acattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||||||| | ||||||||||||||||||   |||||||||||||||||| ||||||||||||| |||||||||    
T  48683786 acattataaaatgatttttaggaaattgaattaacaacattg-ataaatgatcatataatatttcaaaaacacttaatttatttt 48683703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 10943687 - 10943767
Alignment:
Q  4 attataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||||| ||||||||||||||||||||   |||||| || |||||||||||||||||||||| |||||||||    
T  10943687 attataaaatgatttttagaaaattgaattaacaacat--aataaataattatataatacttcaaaaacacttaatttatttt 10943767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 17474276 - 17474359
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||| ||||||| |||||||||||||||| |||  |||||| |||| |||||||||||||||||||| |||||||||    
T  17474276 gacattataaaataattttttaaaaattgaattaacaatatg--ataaataatcaaataatacttcaaaaacacttaatttatttt 17474359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 24253896 - 24253813
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||| |||| |||| ||||||||||||||||  ||||||||| |||||| ||||||||||||||| |||||||||    
T  24253896 gacattataaaatgagttttagaaagttgaattaacaacatg--ataaatgattatataacacttcaaaaacacttaatttatttt 24253813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 42699682 - 42699765
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||| | |||| ||||||||||||| ||| ||||||  ||||||||||||||||||||||||||||| |||||||||    
T  42699682 gacattataaaataaattttagaaaattgaattatcaatatgata--aatgatcatataatacttcaaaaacacttaatttatttt 42699765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 8432329 - 8432412
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||||||||  ||||||||||||||||||||  |||||| ||  ||||||||||||||||||||| ||| |||||    
T  8432329 gacattataaaatgatttttacaaaattgaattaacaacatg--ataaataattttataatacttcaaaaacacttaattcatttt 8432412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 46978594 - 46978518
Alignment:
Q  8 taaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||||  |||||| ||||||||||||||||  |||||| ||||||||||||||||||| || |||||||||    
T  46978594 taaaatgatttttataaaatttaattaacaacatgata--aatgattatataatacttcaaaaacatttaatttatttt 46978518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 36727349 - 36727268
Alignment:
Q  2 acattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||| |||||  ||||||| | ||||||||||||||  ||| ||||||||||||||||||||||||| |||||||||    
T  36727349 acattataaaataattttaagaaaattaacttaacaacatgata--aattatcatataatacttcaaaaacactt-atttatttt 36727268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 16884064 - 16884124
Alignment:
Q  23 aaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  16884064 aaaattgaat-aacaacatgata--aatgatcatataatacttcaaaaacacttaatttatttt 16884124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 54985763 - 54985838
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatata-----aatgatcatataatacttcaaaaa 71  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||| |     ||||||||||||||||||||||||    
T  54985763 gacattataaattgatttttagaaaattgaattaacaatatgataaatgaataatgatcatataatacttcaaaaa 54985838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 44412410 - 44412357
Alignment:
Q  114 tgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttaga 167  Q
    |||||||||||||| ||||||||| |||||| ||||| ||||||||||||||||    
T  44412410 tgagtcctcccctctcttcccctcctaaaccctcaattcaaacacacccttaga 44412357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 24560261 - 24560213
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttaga 167  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||||||    
T  24560261 cctcccctcccttcccctcctaaacccttaatccaaacacacccttaga 24560213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 42770099 - 42770051
Alignment:
Q  169 agttttctgcttctgctttctcaccttcagctgcagaaccttctttacc 217  Q
    |||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  42770099 agttttcttcttccgctttctcacctttagctgcagaaccttctttacc 42770051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 44412555 - 44412603
Alignment:
Q  113 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacc 161  Q
    |||||||||||||||||||||||||  ||||| ||||||||||||||||    
T  44412555 gtgagtcctcccctcccttcccctcacaaaccatcaatccaaacacacc 44412603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 55428553 - 55428492
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatact 64  Q
    ||||||| || ||||||||| |||||||||||||||||| ||  ||||||||||||||||||||    
T  55428553 gacattacaagatgatttttagaaaattgaattaacaacgtg--ataaatgatcatataatact 55428492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 5903593 - 5903546
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 166  Q
    |||||||| ||||||||||||||| | |||||||||||||||||||||    
T  5903593 cctcccctgccttcccctcttaaatcctcaatccaaacacacccttag 5903546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 27197734 - 27197802
Alignment:
Q  16 ttttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||| |||||||||||||||||||||  ||| ||||||||||||||||| ||| | |||| |||||||||    
T  27197734 tttttagaaaattgaattaacaacatg--atagatgatcatataatactttaaatatacttaatttatttt 27197802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 27197843 - 27197898
Alignment:
Q  113 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttagag 168  Q
    |||||||||||  || ||||| |||||||||||||||| |||||||||||||||||    
T  27197843 gtgagtcctcctttctcttcctctcttaaaccttcaattcaaacacacccttagag 27197898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 34641190 - 34641237
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 166  Q
    ||||||||||||||||||| |||||| || ||||||||||||||||||    
T  34641190 cctcccctcccttcccctcctaaaccctccatccaaacacacccttag 34641237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 45663220 - 45663279
Alignment:
Q  6 tataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaa 68  Q
    |||||||| ||||||||||||||||| ||||||||||  |||||||||| |||||||||||||    
T  45663220 tataaaat-attttttgaaaattgaaataacaacatg--ataaatgatcttataatacttcaa 45663279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 21773819 - 21773777
Alignment:
Q  126 tcccttcccctcttaaaccttcaatccaaacacacccttagag 168  Q
    |||||||||||| ||||||||||||||||||| ||||||||||    
T  21773819 tcccttcccctcctaaaccttcaatccaaacatacccttagag 21773777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 165
Target Start/End: Original strand, 25655172 - 25655218
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    |||||||||||||| |||||| |||| ||||||||||||||||||||    
T  25655172 cctcccctcccttctcctcttcaaccctcaatccaaacacaccctta 25655218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 24253762 - 24253717
Alignment:
Q  122 cccctcccttcccctcttaaaccttcaatccaaacacacccttaga 167  Q
    |||||||||| ||||| |||||| ||||||||||||||||||||||    
T  24253762 cccctccctttccctcctaaaccctcaatccaaacacacccttaga 24253717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 31664427 - 31664391
Alignment:
Q  123 ccctcccttcccctcttaaaccttcaatccaaacaca 159  Q
    |||||||||||||||||||||| ||||||||||||||    
T  31664427 ccctcccttcccctcttaaaccctcaatccaaacaca 31664391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 31931969 - 31932005
Alignment:
Q  123 ccctcccttcccctcttaaaccttcaatccaaacaca 159  Q
    |||||||||||||||||||||| ||||||||||||||    
T  31931969 ccctcccttcccctcttaaaccctcaatccaaacaca 31932005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 160
Target Start/End: Original strand, 21090265 - 21090312
Alignment:
Q  113 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacac 160  Q
    |||||||||| |||||||||| ||| |||||| |||||||||||||||    
T  21090265 gtgagtcctctcctcccttcctctcctaaaccatcaatccaaacacac 21090312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 159
Target Start/End: Original strand, 55428581 - 55428619
Alignment:
Q  121 tcccctcccttcccctcttaaaccttcaatccaaacaca 159  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  55428581 tcccctcccttcccctcctaaaccctcaatccaaacaca 55428619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 165
Target Start/End: Original strand, 6803406 - 6803447
Alignment:
Q  124 cctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    |||| ||||||||| |||||||||||||||||||||| ||||    
T  6803406 cctctcttcccctcctaaaccttcaatccaaacacacactta 6803447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 8432308 - 8432259
Alignment:
Q  116 agtcctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    |||||||||||| ||||||||| |||||| || || ||||||||||||||    
T  8432308 agtcctcccctctcttcccctcgtaaaccctccattcaaacacaccctta 8432259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 168
Target Start/End: Complemental strand, 9312516 - 9312471
Alignment:
Q  123 ccctcccttcccctcttaaaccttcaatccaaacacacccttagag 168  Q
    |||||||||||||| ||||||| |||||||||||| ||||| ||||    
T  9312516 ccctcccttcccctattaaaccctcaatccaaacataccctaagag 9312471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 165
Target Start/End: Original strand, 17474407 - 17474452
Alignment:
Q  120 ctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    |||||||||||||||||| | |||| |||||||||||||| |||||    
T  17474407 ctcccctcccttcccctcctcaaccctcaatccaaacacatcctta 17474452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 18654712 - 18654753
Alignment:
Q  45 ataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||||||||||||  |||||| |||||||||    
T  18654712 ataaatgatcatataatacttcaattacacttaatttatttt 18654753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 165
Target Start/End: Original strand, 18654802 - 18654847
Alignment:
Q  120 ctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    |||||||||||||||||| |||||| ||||| ||||||||| ||||    
T  18654802 ctcccctcccttcccctcctaaaccctcaattcaaacacactctta 18654847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 54996792 - 54996833
Alignment:
Q  45 ataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||||||||||||  |||||||||| |||||    
T  54996792 ataaatgatcatataatacttcaatcacacttcattcatttt 54996833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 28582709 - 28582753
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||||||||||||||| |||| | ||| ||||||||||||||    
T  28582709 cctcccctcccttcccctcctaaatcctcagtccaaacacaccct 28582753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 165
Target Start/End: Original strand, 41110527 - 41110567
Alignment:
Q  125 ctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    |||||||||||||  ||||| ||||||||||||||||||||    
T  41110527 ctcccttcccctcacaaaccctcaatccaaacacaccctta 41110567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 41414128 - 41414076
Alignment:
Q  113 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    ||||| ||||||||||||| ||||| |||||| |||||| ||||| |||||||    
T  41414128 gtgagccctcccctccctttccctcctaaaccctcaatctaaacataccctta 41414076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 46205017 - 46204977
Alignment:
Q  46 taaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||||||||||||||  |||||| |||||||||    
T  46205017 taaatgatcatataatacttcaatcacacttaatttatttt 46204977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 7e-30; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 43732861 - 43732778
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||| |||||||||    
T  43732861 gacattataaaatgattttttgaaaattgaattaacaatatg--ataaatgatcatataatacttcaaaaacacttaatttatttt 43732778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 12022214 - 12022296
Alignment:
Q  2 acattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||    
T  12022214 acattataaaatgatttttagaaaattgaattaacaacatg--ataaatgatcatataatacttcaaaaacacttaatttatttt 12022296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 16024328 - 16024246
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 85  Q
    |||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||    
T  16024328 gacattataaaatgatttttagaaaattgaattaacaacatg--ataaatgatcatataatacttcaaaaacacttaatttattt 16024246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 8671862 - 8671947
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||||||||||| ||||||||||||||||| |||| | ||||||||||||||||||||||||| |||| |||||||||    
T  8671862 gacattataaaatgatttttagaaaattgaattaacaatatgaaaaaaatgatcatataatacttcaaaaatacttaatttatttt 8671947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 20472762 - 20472845
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||| | |||| ||||||||||||||||| ||||||||  ||||||||||||||||||||||||||| |||||||||    
T  20472762 gacattataaaataaattttagaaaattgaattaacaatatgatata--tgatcatataatacttcaaaaacacttgatttatttt 20472845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 34196483 - 34196402
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 85  Q
    |||||||||||||||||||| |||||||||||||||||||  | ||||| |||||||||||||||||||||||||| ||||||||    
T  34196483 gacattataaaatgatttttagaaaattgaattaacaaca--agataaacgatcatataatacttcaaaaacactt-atttattt 34196402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 8815211 - 8815284
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacactt 76  Q
    |||||||||||||||||||| ||||||||||| |||||||||  ||||||||| ||||||||||||||||||||||    
T  8815211 gacattataaaatgatttttagaaaattgaatcaacaacatg--ataaatgattatataatacttcaaaaacactt 8815284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 30365304 - 30365223
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatt 84  Q
    |||||||| ||||||||||| |||||||||||||||||||||  ||||||||| |||||| ||||||||||||||| |||||||    
T  30365304 gacattatgaaatgatttttagaaaattgaattaacaacatg--ataaatgattatataacacttcaaaaacacttaatttatt 30365223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 9933415 - 9933332
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||||||||||   ||||||||||||||||||||  |||||||||||||||||| |||||||| |||| |||||||||    
T  9933415 gacattataaaatgattttaaaaaaattgaattaacaacatg--ataaatgatcatataatatttcaaaaatacttaatttatttt 9933332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 40633059 - 40633142
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||| |||||| |||||||||||||||||||||  |||||||||  ||||||| ||||||||||||| |||||||||    
T  40633059 gacattataaaataatttttagaaaattgaattaacaacatg--ataaatgattgtataatatttcaaaaacacttaatttatttt 40633142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 29937676 - 29937614
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatactt 65  Q
    |||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||    
T  29937676 gacattataaaatgatttttagaaaattgaattaacaacatg--ataaatgatcatataatactt 29937614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 6453356 - 6453275
Alignment:
Q  3 cattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||||||||| |||||||||||||| ||||||  |||| | ||||||||||||||||||||||||| || ||||||    
T  6453356 cattataaaatgatttttagaaaattgaattaataacatg--ataagtaatcatataatacttcaaaaacacttaatatatttt 6453275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 43826500 - 43826423
Alignment:
Q  7 ataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||| |||||| |||||||||||||||||||||  ||||||||||||| |||||||||||||||||| | |||||||    
T  43826500 ataaaataatttttagaaaattgaattaacaacatg--ataaatgatcataaaatacttcaaaaacacttaacttatttt 43826423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 39449474 - 39449398
Alignment:
Q  5 ttataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttat 83  Q
    ||||||||| ||||||  ||||||||||||||||||||||   |||||||||||||||||||||||||| || ||||||    
T  39449474 ttataaaattatttttaaaaaattgaattaacaacatgatt--aatgatcatataatacttcaaaaacagttaatttat 39449398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 43732729 - 43732676
Alignment:
Q  113 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 166  Q
    ||||||||||| ||||||||||||| |||||| |||||||||||||||||||||    
T  43732729 gtgagtcctcctctcccttcccctcctaaaccctcaatccaaacacacccttag 43732676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 9434377 - 9434450
Alignment:
Q  9 aaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatt 84  Q
    ||||| ||||||  |||||||||||||||||||||||  |||||| |||||||||||||||| ||||| |||||||    
T  9434377 aaaataatttttaaaaaattgaattaacaacatgata--aatgataatataatacttcaaaaccacttaatttatt 9434450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 167
Target Start/End: Original strand, 12022337 - 12022391
Alignment:
Q  113 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttaga 167  Q
    ||||| |||||||||| |||||||| |||||| ||||||||||||||||||||||    
T  12022337 gtgagccctcccctcctttcccctcctaaaccctcaatccaaacacacccttaga 12022391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 163
Target Start/End: Original strand, 4247725 - 4247764
Alignment:
Q  124 cctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  4247725 cctcccttcccctcctaaaccttcaatccaaacacaccct 4247764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 165
Target Start/End: Original strand, 8815341 - 8815387
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    |||||||||||| |||||| |||||| ||||||||||||||||||||    
T  8815341 cctcccctccctccccctcctaaaccctcaatccaaacacaccctta 8815387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 31543116 - 31543070
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    |||||||||||||||||||||||||| || ||||||||| |||||||    
T  31543116 cctcccctcccttcccctcttaaaccctccatccaaacataccctta 31543070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 38198135 - 38198202
Alignment:
Q  17 tttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||| ||||||||| ||||||||||||||  ||||||||||||||||||||  |||||| ||| |||||    
T  38198135 tttttaaaaattgaaataacaacatgatat--atgatcatataatacttcaatcacacttaattcatttt 38198202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 22591501 - 22591555
Alignment:
Q  24 aaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatt 80  Q
    ||||||||| ||||||||||||  ||||||||||||||||||||| | |||||||||    
T  22591501 aaattgaatgaacaacatgata--aatgatcatataatacttcaatagcacttcatt 22591555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 31543272 - 31543316
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||||||||||||||| |||||| |||||| |||||||||||    
T  31543272 cctcccctcccttcccctcctaaaccctcaatcgaaacacaccct 31543316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 43732887 - 43732931
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||||||||||||||| |||||| || |||||||||||||||    
T  43732887 cctcccctcccttcccctcctaaaccctccatccaaacacaccct 43732931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 163
Target Start/End: Complemental strand, 2248495 - 2248452
Alignment:
Q  120 ctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    |||||||||||||||||| |||||  ||||||||||||||||||    
T  2248495 ctcccctcccttcccctcctaaactctcaatccaaacacaccct 2248452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 164
Target Start/End: Original strand, 7394663 - 7394706
Alignment:
Q  121 tcccctcccttcccctcttaaaccttcaatccaaacacaccctt 164  Q
    ||||||||||||||||| |||||| |||||||||||||| ||||    
T  7394663 tcccctcccttcccctcctaaaccctcaatccaaacacatcctt 7394706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 9718681 - 9718723
Alignment:
Q  121 tcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    |||||||||||| |||| |||||| ||||||||||||||||||    
T  9718681 tcccctcccttctcctcctaaaccctcaatccaaacacaccct 9718723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 165
Target Start/End: Complemental strand, 9933280 - 9933238
Alignment:
Q  123 ccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    |||||| ||| |||| |||||||||||||||||||||||||||    
T  9933280 ccctcctttctcctcctaaaccttcaatccaaacacaccctta 9933238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 41103548 - 41103502
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    ||||||||| ||||||||| |||||| || |||||||||||||||||    
T  41103548 cctcccctctcttcccctcctaaaccctccatccaaacacaccctta 41103502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 161
Target Start/End: Complemental strand, 16024196 - 16024155
Alignment:
Q  120 ctcccctcccttcccctcttaaaccttcaatccaaacacacc 161  Q
    ||||||||||||||| || |||||| ||||||||||||||||    
T  16024196 ctcccctcccttcccttcctaaaccctcaatccaaacacacc 16024155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 24243118 - 24243199
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 85  Q
    |||| ||||||||| | |||| ||||||||| ||| |||||||||  |||||||||||||||||||||  |||||| ||| ||||    
T  24243118 gacactataaaatg-tcttttaaaaattgaaataataacatgata--aatgatcatataatacttcaatcacacttaattaattt 24243199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 26167888 - 26167847
Alignment:
Q  45 ataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||||||||||||||| ||| ||| |||||||||    
T  26167888 ataaatgatcatataatacttcaataactctttatttatttt 26167847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 27483692 - 27483652
Alignment:
Q  45 ataaatgatcatataatacttcaaaaacacttcatttattt 85  Q
    |||||| ||||||||||||||||| ||||||| ||||||||    
T  27483692 ataaattatcatataatacttcaataacactttatttattt 27483652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 33519222 - 33519140
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 85  Q
    |||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||    
T  33519222 gacattataaaatgatttttagaaaattgaattaacaacatg--ataaatgatcatataatacttcaaaaacacttaatttattt 33519140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 28074173 - 28074255
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 85  Q
    |||||||||||||||||||| |||||||||||||||||| ||  |||||||||||||||||||||||||||||||| ||||||||    
T  28074173 gacattataaaatgatttttagaaaattgaattaacaacctg--ataaatgatcatataatacttcaaaaacacttaatttattt 28074255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 21857520 - 21857438
Alignment:
Q  2 acattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||||||| |||||||||||||||||||||  ||||||||||||| |||| ||||||||||||| |||||||||    
T  21857520 acattataaaatgatttttagaaaattgaattaacaacatg--ataaatgatcatacaatatttcaaaaacacttaatttatttt 21857438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 3215934 - 3216013
Alignment:
Q  5 ttataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||||||| ||||||||||||||||| |||  ||||||||||||||||||||||| ||| |||| |||||||||    
T  3215934 ttataaaatgatttttagaaaattgaattaacaatatg--ataaatgatcatataatacttcataaatacttgatttatttt 3216013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 35422138 - 35422055
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||| |||||| ||||||||||||||||||||   |||||| ||||||| ||||||||||||||||| |||||||||    
T  35422138 gacattataaaataatttttagaaaattgaattaacaacat--aataaataatcatatgatacttcaaaaacacttaatttatttt 35422055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 37620948 - 37620865
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||||||||||| ||||||||||||| |||||||  ||||| ||| ||||||||||||||||||| || |||||||||    
T  37620948 gacattataaaatgatttttggaaaattgaattatcaacatg--ataaaagattatataatacttcaaaaacatttaatttatttt 37620865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 39646643 - 39646560
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||||||||||| |||||||||||||||||||||  ||  ||||| ||||||||||||||||||| || |||||||||    
T  39646643 gacattataaaatgatttttagaaaattgaattaacaacatg--attgatgatgatataatacttcaaaaacagttaatttatttt 39646560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 36267626 - 36267696
Alignment:
Q  4 attataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacactt 76  Q
    ||||||||||||||||| ||||||||||| ||||| ||||||  |||||||||||||||||||||||||||||    
T  36267626 attataaaatgatttttagaaaattgaatcaacaatatgata--aatgatcatataatacttcaaaaacactt 36267696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 48015377 - 48015299
Alignment:
Q  5 ttataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 85  Q
    ||||||||| |||||| |||||||||||||||||||||  |||||||||||||||||  ||||||||||||| ||||||||    
T  48015377 ttataaaataatttttggaaaattgaattaacaacatg--ataaatgatcatataatttttcaaaaacacttaatttattt 48015299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 48881628 - 48881711
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||| |||||  |||||||||||||||||||||  ||||||||| ||||||| ||||||||| |||| |||||||||    
T  48881628 gacattataaaataattttcagaaaattgaattaacaacatg--ataaatgattatataatgcttcaaaaatacttaatttatttt 48881711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 28074153 - 28074100
Alignment:
Q  113 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 166  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  28074153 gtgagttctcccctcccttcccctcctaaaccttcaatccaaacacacccttag 28074100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 37926015 - 37925933
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 85  Q
    |||||||||||||||| ||| |||||||||||||||||||||  ||  ||||| |||||||||||||||||||||| || |||||    
T  37926015 gacattataaaatgatgtttagaaaattgaattaacaacatg--attgatgatgatataatacttcaaaaacacttaatctattt 37925933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 12670928 - 12670988
Alignment:
Q  23 aaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 85  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||| ||||    
T  12670928 aaaattgaattaacaacatgata--aatgatcatataatacttcaaaaacacttaattcattt 12670988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 48013673 - 48013593
Alignment:
Q  5 ttataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatat-aatacttcaaaaacacttcatttatttt 86  Q
    ||||||||| |||||| |||||||||||||||||||||  |||||||||||||| |||  ||||||||||||| |||||||||    
T  48013673 ttataaaataatttttagaaaattgaattaacaacatg--ataaatgatcatatgaatttttcaaaaacacttaatttatttt 48013593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 2087812 - 2087896
Alignment:
Q  4 attataaaatgattttttgaaaattgaattaacaacatgat--ataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||| ||||||  |||| |||||||||||||||||  |||| |||||||||||||||||||||||| |  |||||||||    
T  2087812 attataaaataatttttaaaaaaatgaattaacaacatgataaataattgatcatataatacttcaaaaacattaaatttatttt 2087896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 37925885 - 37925836
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttagag 168  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  37925885 cctcccctcccttcccctcctaaaccctcaatccaaacacacccttagag 37925836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 16833867 - 16833786
Alignment:
Q  3 cattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||| || ||||||  ||||||||||||| |||||||||  ||||||||| ||||||||||||||||||| |||| ||||    
T  16833867 cattataatataatttttataaaattgaattaataacatgata--aatgatcatgtaatacttcaaaaacacttaatttttttt 16833786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 3143658 - 3143571
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaac-aacatgat-ataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||| ||||||  |||||||||||||  ||||  || ||||||||||||||||||||||||||| |||| |||||||||    
T  3143658 gacattataaaataatttttaaaaaattgaattaattaacaaaatgataaatgatcatataatacttcaaaaaaacttaatttatttt 3143571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 165
Target Start/End: Original strand, 39856065 - 39856111
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  39856065 cctcccctcccttcccctcctaaaccctcaatccaaacacaccctta 39856111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 1051697 - 1051746
Alignment:
Q  118 tcctcccctcccttcccctcttaaaccttcaatccaaacacacccttaga 167  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||||||||    
T  1051697 tcctctcctcccttcccctcctaaaccctcaatccaaacacacccttaga 1051746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 8122322 - 8122235
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcata----taatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||| |||||| ||||||||||||||||| |||  |||||| ||||||    |||||||||||||||| || |||||||||    
T  8122322 gacattataaaataatttttagaaaattgaattaacaagatg--ataaattatcatataattaatacttcaaaaacaattaatttatttt 8122235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 25887237 - 25887192
Alignment:
Q  118 tcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||    
T  25887237 tcctcccctcccttcccctcataaaccctcaatccaaacacaccct 25887192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 31364115 - 31364183
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacac 74  Q
    |||||||||||||||||||  ||||||||||| |||     || ||||||||||||||||||||||||||||||    
T  31364115 gacattataaaatgattttaagaaaattgaatcaac-----gacataaatgatcatataatacttcaaaaacac 31364183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 36267748 - 36267797
Alignment:
Q  114 tgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||||||||    
T  36267748 tgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 36267797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 165
Target Start/End: Original strand, 47391057 - 47391102
Alignment:
Q  120 ctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    ||||||||||||||||||||||||| || |||||||||||||||||    
T  47391057 ctcccctcccttcccctcttaaaccctccatccaaacacaccctta 47391102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 168
Target Start/End: Original strand, 34228518 - 34228568
Alignment:
Q  118 tcctcccctcccttcccctcttaaaccttcaatccaaacacacccttagag 168  Q
    ||||||||||||||| |||| |||||||||||| |||||||||||| ||||    
T  34228518 tcctcccctcccttctcctcctaaaccttcaattcaaacacaccctaagag 34228568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 39646519 - 39646469
Alignment:
Q  113 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    |||| |||||||||||||||| ||| |||||| ||||||||||||||||||    
T  39646519 gtgattcctcccctcccttcctctcctaaaccgtcaatccaaacacaccct 39646469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 13770993 - 13770948
Alignment:
Q  118 tcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    |||||||||||||||||||| |||| | ||||||||||||||||||    
T  13770993 tcctcccctcccttcccctcctaaatcctcaatccaaacacaccct 13770948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 18231785 - 18231834
Alignment:
Q  118 tcctcccctcccttcccctcttaaaccttcaatccaaacacacccttaga 167  Q
    |||||||||||||||||||| |||||  || |||||||||||||||||||    
T  18231785 tcctcccctcccttcccctcctaaacgctccatccaaacacacccttaga 18231834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 33519248 - 33519292
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||||||||||||||| |||||| || |||||||||||||||    
T  33519248 cctcccctcccttcccctcctaaaccctccatccaaacacaccct 33519292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 36267597 - 36267553
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||||||||||||||| |||||| || |||||||||||||||    
T  36267597 cctcccctcccttcccctcctaaaccctccatccaaacacaccct 36267553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 37926036 - 37926083
Alignment:
Q  114 tgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacc 161  Q
    ||||||||||||||||||||| || |||| ||||||||| ||||||||    
T  37926036 tgagtcctcccctcccttcccttcctaaatcttcaatcctaacacacc 37926083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 4833575 - 4833529
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    ||||||||||||||||||| |||||| || ||||||||| |||||||    
T  4833575 cctcccctcccttcccctcctaaaccctccatccaaacataccctta 4833529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 162
Target Start/End: Original strand, 31571671 - 31571713
Alignment:
Q  120 ctcccctcccttcccctcttaaaccttcaatccaaacacaccc 162  Q
    |||||||| ||||||||| |||||| |||||||||||||||||    
T  31571671 ctcccctcgcttcccctcctaaaccctcaatccaaacacaccc 31571713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 40282241 - 40282191
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttagaga 169  Q
    ||||| ||||||||||||| |||||| |||||||||||| ||||| |||||    
T  40282241 cctcctctcccttcccctcctaaaccctcaatccaaacataccctaagaga 40282191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 41496999 - 41496957
Alignment:
Q  121 tcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||||||||||||| |||||| || |||||||||||||||    
T  41496999 tcccctcccttcccctcctaaaccctccatccaaacacaccct 41496957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 48881600 - 48881558
Alignment:
Q  121 tcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||||||||||||| |||||| || |||||||||||||||    
T  48881600 tcccctcccttcccctcctaaaccctccatccaaacacaccct 48881558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 7791893 - 7791831
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatactt 65  Q
    |||| ||||||||  |||||||||||||||| ||| ||||||  |||||| ||||||||||||||    
T  7791893 gacactataaaatacttttttgaaaattgaaataaaaacatg--ataaataatcatataatactt 7791831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 165
Target Start/End: Original strand, 13771151 - 13771192
Alignment:
Q  124 cctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    |||||||||||||| |||||| |||||| |||||||||||||    
T  13771151 cctcccttcccctcctaaaccctcaatctaaacacaccctta 13771192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 18063673 - 18063714
Alignment:
Q  45 ataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||||||||||||  |||||| |||||||||    
T  18063673 ataaatgatcatataatacttcaatcacacttaatttatttt 18063714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 20393734 - 20393693
Alignment:
Q  44 tataaatgatcatataatacttcaaaaacacttcatttattt 85  Q
    |||||||||||||||||||||||||  |||||| ||||||||    
T  20393734 tataaatgatcatataatacttcaatcacacttaatttattt 20393693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 161
Target Start/End: Original strand, 23116425 - 23116470
Alignment:
Q  116 agtcctcccctcccttcccctcttaaaccttcaatccaaacacacc 161  Q
    |||||||||||||||||||||| |||||| ||  ||||||||||||    
T  23116425 agtcctcccctcccttcccctcgtaaaccctcggtccaaacacacc 23116470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 33519098 - 33519045
Alignment:
Q  113 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 166  Q
    ||||| ||||||||||||||||||| |||| | || |||||||||| |||||||    
T  33519098 gtgagccctcccctcccttcccctcctaaaacctccatccaaacactcccttag 33519045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 33655220 - 33655261
Alignment:
Q  45 ataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||||||||||||  |||||| |||||||||    
T  33655220 ataaatgatcatataatacttcaatcacacttaatttatttt 33655261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 161
Target Start/End: Complemental strand, 37620817 - 37620776
Alignment:
Q  120 ctcccctcccttcccctcttaaaccttcaatccaaacacacc 161  Q
    ||||||||||||||||||  ||||| ||||||||||||||||    
T  37620817 ctcccctcccttcccctcccaaaccctcaatccaaacacacc 37620776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 157
Target Start/End: Complemental strand, 41008225 - 41008188
Alignment:
Q  120 ctcccctcccttcccctcttaaaccttcaatccaaaca 157  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  41008225 ctcccctcccttcccctctcaaaccctcaatccaaaca 41008188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 165
Target Start/End: Original strand, 48881758 - 48881795
Alignment:
Q  128 ccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  48881758 ccttcccctcctaaaccctcaatccaaacacaccctta 48881795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 165
Target Start/End: Original strand, 10315839 - 10315879
Alignment:
Q  125 ctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    ||||||||||||| ||||||||| |||||||||| ||||||    
T  10315839 ctcccttcccctcctaaaccttccatccaaacacgccctta 10315879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 18127433 - 18127476
Alignment:
Q  117 gtcctcccctcccttcccctcttaaaccttcaatccaaacacacc 161  Q
    ||||||||||| |||||||||||||||| || |||||||||||||    
T  18127433 gtcctcccctcacttcccctcttaaaccatc-atccaaacacacc 18127476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 28074308 - 28074352
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    |||||||| |||||| ||| |||||| ||||||||||||||||||    
T  28074308 cctccccttccttcctctcctaaaccctcaatccaaacacaccct 28074352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 31364249 - 31364285
Alignment:
Q  124 cctcccttcccctcttaaaccttcaatccaaacacac 160  Q
    |||||||||||||| |||||| |||||||||||||||    
T  31364249 cctcccttcccctcctaaaccctcaatccaaacacac 31364285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 37417835 - 37417871
Alignment:
Q  131 tcccctcttaaaccttcaatccaaacacacccttaga 167  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  37417835 tcccctcctaaaccctcaatccaaacacacccttaga 37417871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 47390899 - 47390855
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||| ||||||||||||| ||| || ||||||||||||||||||    
T  47390899 cctccactcccttcccctcctaacccctcaatccaaacacaccct 47390855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 4e-28; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 45257478 - 45257398
Alignment:
Q  4 attataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||| |||||||||    
T  45257478 attataaaatgattttttgaaaattgaattaacaatatgata--aatgatcatataatacttcaaaaacacttaatttatttt 45257398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 15085770 - 15085853
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||||||||||| |||||||||||||||||| |||||  ||||||||||||||||||||||||||||| |||||||||    
T  15085770 gacattataaaatgatttttagaaaattgaattaacaacttgata--aatgatcatataatacttcaaaaacacttaatttatttt 15085853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 33265773 - 33265697
Alignment:
Q  8 taaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||| |||||||||    
T  33265773 taaaatgattttttgaaaattgaattaacaatatgata--aatgatcatataatacttcaaaaacacttaatttatttt 33265697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 31061533 - 31061450
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||| ||| ||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||| |||||||||    
T  31061533 gacattataaagtgactttttgaaaattgaattaacaacatg--ataaatgatcatataatatttcaaaaacacttaatttatttt 31061450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 45098343 - 45098260
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||||| |||||  |||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  45098343 gacattataaaatggtttttgaaaaattgaattaacaacatgata--aatgatcatataatacttcaaaaacacttaatttatttt 45098260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 31928121 - 31928196
Alignment:
Q  8 taaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 85  Q
    |||||||||||||| ||||||||||||| |||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  31928121 taaaatgatttttttaaaattgaattaataacatgata--aatgatcatataatacttcaaaaacacttaatttattt 31928196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 34187751 - 34187666
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgat--catataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||||||||||| |||||||||||||||||||||  |||||||||   |||||||||||||||||||||| |||||||||    
T  34187751 gacattataaaatgatttttagaaaattgaattaacaacatg--ataaatgattatatataatacttcaaaaacacttaatttatttt 34187666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 35325443 - 35325360
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||| ||||||  ||||||||||||| |||||||||  |||||||||||||||||||||||| |||| |||||||||    
T  35325443 gacattataaaataatttttaaaaaattgaattaataacatgata--aatgatcatataatacttcaaaaatacttaatttatttt 35325360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 36052158 - 36052230
Alignment:
Q  2 acattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacactt 76  Q
    ||||||||||||||||||| ||||||||||||||||||||   ||| |||||||||| |||||||||||||||||    
T  36052158 acattataaaatgatttttagaaaattgaattaacaacat--catacatgatcatatgatacttcaaaaacactt 36052230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 1052828 - 1052907
Alignment:
Q  4 attataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 85  Q
    |||||||||| |||||| |||||||||||||||||||||  |||||||||| ||||||| |||||||||| || ||||||||    
T  1052828 attataaaataatttttagaaaattgaattaacaacatg--ataaatgatcgtataatatttcaaaaacatttaatttattt 1052907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 3094427 - 3094494
Alignment:
Q  5 ttataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacac 74  Q
    ||||||||||||| || |||||||||||||||||||||  |||||| |||||||||||||||||||||||    
T  3094427 ttataaaatgattcttagaaaattgaattaacaacatg--ataaataatcatataatacttcaaaaacac 3094494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 42813793 - 42813712
Alignment:
Q  2 acattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 85  Q
    ||||||||||||||||||| |||||||||||||||||| ||  |||||| |||||||||||||| ||||| | || ||||||||    
T  42813793 acattataaaatgatttttagaaaattgaattaacaacctg--ataaataatcatataatactttaaaaatatttgatttattt 42813712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 2381060 - 2381140
Alignment:
Q  4 attataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||| |||| |||||||||||| ||||||||||  |  |||| |||||||||||||||||||||| |||||||||    
T  2381060 attataaaatgaattttagaaaattgaattgacaacatgattga--tgatgatataatacttcaaaaacacttaatttatttt 2381140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 8554369 - 8554441
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacact 75  Q
    ||||||||||||| ||||||| ||||||||||||||| ||||  |||||||||| || |||||||||||||||||    
T  8554369 gacattataaaataattttttaaaaattgaattaacatcatg--ataaatgatcgtacaatacttcaaaaacact 8554441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 9313161 - 9313079
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgat--ataaatgatcatataatacttcaaaaacacttcattt 81  Q
    |||||||||||||||||||| |||||||||||||||||| ||||  || |  |||||||| ||||||||||||||||| ||||    
T  9313161 gacattataaaatgatttttcgaaaattgaattaacaacttgataaatgatcgatcatattatacttcaaaaacacttaattt 9313079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 21502204 - 21502124
Alignment:
Q  4 attataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||| |||||  |||||||| |||||||||| ||||  |||| |||||||||||||||||||||||| |||||||||    
T  21502204 attataaaataattttaagaaaattgcattaacaacaagata--aatggtcatataatacttcaaaaacacttaatttatttt 21502124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 8554446 - 8554495
Alignment:
Q  114 tgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  8554446 tgagtcctcccctccattcccctcttaaactttcaatccaaacacaccct 8554495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 42296376 - 42296456
Alignment:
Q  4 attataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||| |||| ||||| ||||||||||||||   |||||||||||||||||| || |||||||||| ||| |||||    
T  42296376 attataaaatgaattttagaaaaatgaattaacaacat--aataaatgatcatataataatttaaaaacacttaattcatttt 42296456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 17379890 - 17379846
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||    
T  17379890 cctcccctcccttcccctcctaaaccctcaatccaaacacaccct 17379846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 31061409 - 31061357
Alignment:
Q  113 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    ||||| |||||| ||| |||||||| |||||||||||||||||||||||||||    
T  31061409 gtgagccctcccatcctttcccctcctaaaccttcaatccaaacacaccctta 31061357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 35736219 - 35736175
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||    
T  35736219 cctcccctcccttcccctcctaaaccctcaatccaaacacaccct 35736175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 165
Target Start/End: Original strand, 23748295 - 23748341
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    ||||||||||||||||||| |||||| || |||||||||||||||||    
T  23748295 cctcccctcccttcccctcctaaaccctccatccaaacacaccctta 23748341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 167
Target Start/End: Original strand, 35736381 - 35736435
Alignment:
Q  113 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttaga 167  Q
    ||||| |||||||||||||| |||| |||||| || |||||||||||||||||||    
T  35736381 gtgagccctcccctcccttcacctcctaaaccctccatccaaacacacccttaga 35736435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 36046401 - 36046443
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacacc 161  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  36046401 cctcccctcccttcccctcataaaccctcaatccaaacacacc 36046443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 9427029 - 9426980
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttagag 168  Q
    |||| |||||||||||||| ||||| ||||||||||||||||| ||||||    
T  9427029 cctctcctcccttcccctcctaaactttcaatccaaacacaccattagag 9426980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 165
Target Start/End: Original strand, 17380043 - 17380087
Alignment:
Q  121 tcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||    
T  17380043 tcccctcacttcccctcctaaaccctcaatccaaacacaccctta 17380087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 22356204 - 22356248
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||||||||||||||| |||| | ||||||||||||||||||    
T  22356204 cctcccctcccttcccctcctaaatcctcaatccaaacacaccct 22356248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 31795968 - 31796008
Alignment:
Q  123 ccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||||||||||| ||||||||||||||||||| |||||    
T  31795968 ccctcccttcccctcctaaaccttcaatccaaacaaaccct 31796008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 41778817 - 41778769
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttaga 167  Q
    ||||||||||||| ||||  |||||| ||||||||||||||||||||||    
T  41778817 cctcccctccctttcccttctaaaccctcaatccaaacacacccttaga 41778769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 45257357 - 45257305
Alignment:
Q  113 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    |||||||||||| ||| |||||||| |||||  ||||||||||||||||||||    
T  45257357 gtgagtcctcccttcctttcccctcctaaactctcaatccaaacacaccctta 45257305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 22356173 - 22356134
Alignment:
Q  5 ttataaaatgattttttgaaaattgaattaacaacatgat 44  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  22356173 ttataaaatgatttttagaaaattgaattaacaaaatgat 22356134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 163
Target Start/End: Original strand, 36347742 - 36347785
Alignment:
Q  120 ctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||| |||||||||||| |||||| ||||||||||||||||||    
T  36347742 ctcccttcccttcccctcctaaaccctcaatccaaacacaccct 36347785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 39732937 - 39732972
Alignment:
Q  128 ccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||||||| ||||||||||||||||||||||||    
T  39732937 ccttcccctctcaaaccttcaatccaaacacaccct 39732972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 167
Target Start/End: Original strand, 3094547 - 3094601
Alignment:
Q  113 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttaga 167  Q
    ||||||| ||||||||||| || || |||||| |||||||||||||||| |||||    
T  3094547 gtgagtcttcccctccctttccttcctaaaccctcaatccaaacacaccgttaga 3094601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 167
Target Start/End: Original strand, 15224896 - 15224942
Alignment:
Q  121 tcccctcccttcccctcttaaaccttcaatccaaacacacccttaga 167  Q
    ||||||||||||||||| |||||| |  |||||||||||||||||||    
T  15224896 tcccctcccttcccctcctaaacccttgatccaaacacacccttaga 15224942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 17334006 - 17334056
Alignment:
Q  113 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    |||||||||||||| |||||||||| |||||| ||||| |||| |||||||    
T  17334006 gtgagtcctccccttccttcccctcctaaaccctcaattcaaaaacaccct 17334056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 31795816 - 31795766
Alignment:
Q  116 agtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 166  Q
    ||||||||||||||||| |||| |||||| || |||||||||||| |||||    
T  31795816 agtcctcccctcccttcacctcataaaccctccatccaaacacactcttag 31795766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 41778905 - 41778864
Alignment:
Q  45 ataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||||||||||||  |||||| |||||||||    
T  41778905 ataaatgatcatataatacttcaatcacacttaatttatttt 41778864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 2381042 - 2380986
Alignment:
Q  114 tgagtcctcccctccc-ttcccctcttaaaccttcaatccaaacacacccttagaga 169  Q
    |||||||||||||||| |||||||| |||||| || ||||||||||| ||| |||||    
T  2381042 tgagtcctcccctccccttcccctcctaaaccctctatccaaacacatcctaagaga 2380986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 161
Target Start/End: Complemental strand, 16713534 - 16713494
Alignment:
Q  121 tcccctcccttcccctcttaaaccttcaatccaaacacacc 161  Q
    |||| ||||||||||||||||||| |||||| |||||||||    
T  16713534 tcccttcccttcccctcttaaaccctcaatcaaaacacacc 16713494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 42296503 - 42296547
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    |||| |||||||||||||| ||| || ||||||||||||||||||    
T  42296503 cctctcctcccttcccctcctaatccctcaatccaaacacaccct 42296547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 33744263 - 33744346
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| | |||||||||||||| |||||||||    
T  33744263 gacattataaaatgattttttgaaaattgaattaacaacatg--ataaatgatcatatatttcttcaaaaacacttaatttatttt 33744346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 10043423 - 10043343
Alignment:
Q  4 attataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||||| ||||||||||||||||||||  ||||||| ||||||||||||||||||||||||| |||| ||||    
T  10043423 attataaaatgatttttagaaaattgaattaacaacat--tataaataatcatataatacttcaaaaacacttaatttctttt 10043343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 8551488 - 8551571
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||||||||  |||||| ||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||    
T  8551488 gacattataaaatgatttttaaaaaattaaattaacaacat--tataaatgatcatataatactttaaaaacacttaatttatttt 8551571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 34980984 - 34980901
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||||||||| | ||||||||| ||||||||||||||  |||||| |||||||||||||||||||||| |||||||||    
T  34980984 gacattataaaatgatttatagaaaattgagttaacaacatgata--aatgattatataatacttcaaaaacacttaatttatttt 34980901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 10204750 - 10204667
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||| ||||||||||||  ||||||||||||||||| | |||  ||||||||||||||||||||||||||||| |||||||||    
T  10204750 gacattaaaaaatgatttttaaaaaattgaattaacaacgtaata--aatgatcatataatacttcaaaaacacttaatttatttt 10204667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 40305735 - 40305818
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||| |||||| ||||||||||||||||| |||  ||||||||||||||| |||||||||||| ||| |||||||||    
T  40305735 gacattataaaataatttttagaaaattgaattaacaatatg--ataaatgatcatatagtacttcaaaaacccttaatttatttt 40305818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 15986694 - 15986777
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||| ||||  |||||||||||||||||||  |  ||||||||||||||||||| |||||||||| |||||||||    
T  15986694 gacattataaaatgacttttaaaaaattgaattaacaacat--ttaaaatgatcatataatactttaaaaacacttaatttatttt 15986777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 21581117 - 21581038
Alignment:
Q  5 ttataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||| |||| |||||| ||||||||||||||||||||||||  |||| |||||| ||||||||||||||||| |||||||||    
T  21581117 ttatgaaataatttttagaaaattgaattaacaacatgata--aatgttcatatgatacttcaaaaacacttaatttatttt 21581038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 6597860 - 6597920
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatac 63  Q
    |||||| |||||||||||||||||||||||| ||||||||||  |||||||||||||||||||    
T  6597860 gacattgtaaaatgattttttgaaaattgaaataacaacatg--ataaatgatcatataatac 6597920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 14245133 - 14245083
Alignment:
Q  118 tcctcccctcccttcccctcttaaaccttcaatccaaacacacccttagag 168  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  14245133 tcctcccctcccttcccctcctaaaccctcaatccaaacacacccttagag 14245083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 6382501 - 6382419
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 85  Q
    |||||||||||||  ||||| |||||||||||||||||||||  ||||||| |||| | |||||||||||| |||| ||||||||    
T  6382501 gacattataaaatactttttagaaaattgaattaacaacatg--ataaatgttcatgtgatacttcaaaaagacttaatttattt 6382419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 10043100 - 10043162
Alignment:
Q  22 gaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||||||||||||  |||||||||||||||||| |||||||||| ||| |||||    
T  10043100 gaaaattgaattaacaacatgata--aatgatcatataatactttaaaaacacttaattaatttt 10043162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 12036007 - 12036087
Alignment:
Q  2 acattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 85  Q
    |||||||||||| ||| || ||||||||||||| ||||||||||  ||| |||||||||||||| |||||||||| ||||||||    
T  12036007 acattataaaattattattagaaaattgaatta-caacatgata--aattatcatataatacttaaaaaacacttaatttattt 12036087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 13634755 - 13634708
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 166  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||    
T  13634755 cctcccctcccttcccctcctaaaccctcaatccaaacacacccttag 13634708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 169
Target Start/End: Original strand, 14245246 - 14245296
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttagaga 169  Q
    ||||||||||||||||||| |||||| |||||||||||||||||| |||||    
T  14245246 cctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagaga 14245296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 16938523 - 16938479
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||    
T  16938523 cctcccctcccttcccctcctaaaccctcaatccaaacacaccct 16938479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 26414937 - 26414889
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttaga 167  Q
    |||||||||||||| |||| |||||| ||||||||||||||||||||||    
T  26414937 cctcccctcccttctcctcctaaaccctcaatccaaacacacccttaga 26414889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 40305860 - 40305912
Alignment:
Q  114 tgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 166  Q
    ||||| ||||||||||||| |||| |||||| |||||||||||||||||||||    
T  40305860 tgagttctcccctcccttctcctcctaaaccctcaatccaaacacacccttag 40305912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 5688572 - 5688504
Alignment:
Q  16 ttttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||| |||||||||||||||||||||||  |  |||| |||||||||||||||||||||| || ||||||    
T  5688572 tttttagaaaattgaattaacaacatgattga--tgatgatataatacttcaaaaacacttaatctatttt 5688504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 5688589 - 5688640
Alignment:
Q  118 tcctcccctcccttcccctcttaaaccttcaatccaaacacacccttagaga 169  Q
    ||||||| |||||||||||| |||||| |||||||||||||||||| |||||    
T  5688589 tcctcccttcccttcccctcctaaaccctcaatccaaacacaccctaagaga 5688640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 7544180 - 7544133
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 166  Q
    |||||||||||||||| || |||||| |||||||||||||||||||||    
T  7544180 cctcccctcccttcccttcctaaaccctcaatccaaacacacccttag 7544133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 162
Target Start/End: Original strand, 13634911 - 13634954
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccc 162  Q
    ||||||||||||||||||| |||||| |||||||||||||||||    
T  13634911 cctcccctcccttcccctcctaaaccctcaatccaaacacaccc 13634954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 42681493 - 42681450
Alignment:
Q  118 tcctcccctcccttcccctcttaaaccttcaatccaaacacacc 161  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||    
T  42681493 tcctcccctcctttcccctcttaaaccctcaatccaaacacacc 42681450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 165
Target Start/End: Original strand, 20147074 - 20147116
Alignment:
Q  123 ccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  20147074 ccctcccttcccctcctaaaccctcaatccaaacacaccctta 20147116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 161
Target Start/End: Complemental strand, 34980850 - 34980812
Alignment:
Q  123 ccctcccttcccctcttaaaccttcaatccaaacacacc 161  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  34980850 ccctcccttcccctcctaaaccttcaatccaaacacacc 34980812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 10204626 - 10204573
Alignment:
Q  113 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 166  Q
    ||||| |||| |||||||||||||| |||||| || ||||||||||||||||||    
T  10204626 gtgagccctcacctcccttcccctcctaaaccctcgatccaaacacacccttag 10204573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 11757103 - 11757144
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacac 160  Q
    |||||||||||||||||||||||||| || ||||||||||||    
T  11757103 cctcccctcccttcccctcttaaaccctccatccaaacacac 11757144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 12035983 - 12035934
Alignment:
Q  116 agtcctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    |||||||| ||||||||||||| |||||| || |||||||||||||||||    
T  12035983 agtcctcctctcccttcccctcctaaaccatctatccaaacacaccctta 12035934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 15986671 - 15986618
Alignment:
Q  116 agtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttagaga 169  Q
    |||||||||||||||||||||| |||||| ||  |||||||||||||| |||||    
T  15986671 agtcctcccctcccttcccctcctaaaccctctttccaaacacaccctaagaga 15986618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 15986818 - 15986871
Alignment:
Q  113 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 166  Q
    ||||| ||||| || |||||||||| |||||| |||||||||||||||||||||    
T  15986818 gtgagccctcctcttccttcccctcctaaaccctcaatccaaacacacccttag 15986871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 167
Target Start/End: Complemental strand, 40815334 - 40815293
Alignment:
Q  126 tcccttcccctcttaaaccttcaatccaaacacacccttaga 167  Q
    |||||||||||| |||| ||||||||||||||||||||||||    
T  40815334 tcccttcccctcctaaatcttcaatccaaacacacccttaga 40815293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 1658013 - 1658061
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttaga 167  Q
    ||||||||||||||||||| |||||| || ||||||||||||| |||||    
T  1658013 cctcccctcccttcccctcctaaaccctccatccaaacacacctttaga 1658061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 2550552 - 2550592
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacaca 159  Q
    ||||||||||||||||||| |||||| ||||||||||||||    
T  2550552 cctcccctcccttcccctcctaaaccctcaatccaaacaca 2550592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 8551612 - 8551660
Alignment:
Q  113 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacc 161  Q
    ||||| || |||||| ||||||||| |||||||||||||||||||||||    
T  8551612 gtgagaccccccctctcttcccctcctaaaccttcaatccaaacacacc 8551660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 10043302 - 10043250
Alignment:
Q  113 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    ||||||| ||||||||||||||||| |||||| |||||| ||| |||||||||    
T  10043302 gtgagtcatcccctcccttcccctcataaaccatcaatctaaatacaccctta 10043250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 165
Target Start/End: Complemental strand, 13298309 - 13298269
Alignment:
Q  125 ctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    ||||| ||||||||||||| |||||||||||||||||||||    
T  13298309 ctcccctcccctcttaaacattcaatccaaacacaccctta 13298269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 163
Target Start/End: Original strand, 10476229 - 10476272
Alignment:
Q  120 ctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    |||||||||||||||||| |||||| || |||||||||||||||    
T  10476229 ctcccctcccttcccctcctaaaccctccatccaaacacaccct 10476272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 163
Target Start/End: Original strand, 34981007 - 34981054
Alignment:
Q  116 agtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||||||||||||||||||||||||| || ||  |||||||||||    
T  34981007 agtcctcccctcccttcccctcttaaaccctccattaaaacacaccct 34981054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 11436983 - 11436937
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    ||||| ||||||||||||| |||||| ||||||||||||| ||||||    
T  11436983 cctcctctcccttcccctcctaaaccctcaatccaaacacgccctta 11436937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 33744387 - 33744440
Alignment:
Q  113 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 166  Q
    ||||| ||||||||||||||  ||| |||||| |||||||||| ||||||||||    
T  33744387 gtgagccctcccctcccttcatctcctaaaccctcaatccaaatacacccttag 33744440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 160
Target Start/End: Original strand, 12600703 - 12600743
Alignment:
Q  120 ctcccctcccttcccctcttaaaccttcaatccaaacacac 160  Q
    |||||||| ||||||||| |||||||| |||||||||||||    
T  12600703 ctcccctctcttcccctcctaaaccttaaatccaaacacac 12600743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 40305710 - 40305670
Alignment:
Q  123 ccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||||||||||| |||||| || |||||||||||||||    
T  40305710 ccctcccttcccctcctaaaccctccatccaaacacaccct 40305670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 22186893 - 22186810
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||||||||||| |||||||||||||||||||||  ||||||||| |||||||||||||||||||||| |||||||||    
T  22186893 gacattataaaatgatttttagaaaattgaattaacaacatg--ataaatgattatataatacttcaaaaacactttatttatttt 22186810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 43961583 - 43961501
Alignment:
Q  2 acattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  43961583 acattataaaatgatttttagaaaattgaattatcaacatgata--aatgatcatataatacttcaaaaacacttaatttatttt 43961501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 4437498 - 4437578
Alignment:
Q  4 attataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||||||||  ||||||||||||||||||||  |||| ||||||||||||||||||||||||||| |||||||||    
T  4437498 attataaaatgatttttaaaaaattgaattaacaacatg--ataattgatcatataatacttcaaaaacacttgatttatttt 4437578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 7977567 - 7977645
Alignment:
Q  2 acattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcattta 82  Q
    |||||||||||| || |||||||||||||||||||||||||  ||||||||||||||||||||||||||||| || |||||    
T  7977567 acattataaaataatattttgaaaattgaattaacaacatg--ataaatgatcatataatacttcaaaaacaattaattta 7977645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 17182557 - 17182638
Alignment:
Q  5 ttataaaatgattttttg--aaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||||||  |||||||||||||||| ||||||  ||||||||||||||||||||||||||||| |||||||||    
T  17182557 ttataaaatgattttttgcaaaaattgaattaacaatatgata--aatgatcatataatacttcaaaaacacttaatttatttt 17182638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 37761638 - 37761557
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatt 84  Q
    |||||||| ||||||||||| |||||||||||||||||||||  ||||||||| |||||| ||||||||||||||| |||||||    
T  37761638 gacattatgaaatgatttttagaaaattgaattaacaacatg--ataaatgattatataacacttcaaaaacacttaatttatt 37761557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 47846125 - 47846208
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||| ||||||  ||||||||||||| |||||||||  ||| ||||||||||||||||||||||||| |||||||||    
T  47846125 gacattataaaataatttttacaaaattgaattaagaacatgata--aataatcatataatacttcaaaaacacttaatttatttt 47846208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 54576397 - 54576479
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 85  Q
    |||||||||||||||||| | |||||||||||||||||| ||  ||||||||| ||||||||||||||||||| || ||||||||    
T  54576397 gacattataaaatgatttatagaaaattgaattaacaacgtg--ataaatgattatataatacttcaaaaacatttaatttattt 54576479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 55080752 - 55080670
Alignment:
Q  2 acattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||| |||||| ||||||| |||||||||||||  ||||||||||||| |||||||||||||||||| | |||||||    
T  55080752 acattataaaataatttttagaaaatttaattaacaacatg--ataaatgatcataaaatacttcaaaaacacttaacttatttt 55080670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 14539445 - 14539363
Alignment:
Q  2 acattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||| || || ||||||| |||||| ||||| |||  ||||||||||||||||||||||||||||| |||||||||    
T  14539445 acattataaaatgtttgttagaaaattaaattaagaacataata--aatgatcatataatacttcaaaaacacttaatttatttt 14539363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 5825070 - 5825013
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataa 60  Q
    |||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||    
T  5825070 gacattataaaatgatttttagaaaattgaattaacaacatg--ataaatgatcatataa 5825013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 9030390 - 9030309
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatt 84  Q
    |||||||||||||||||||| ||||||| |||||| || |||  ||||||||| ||||||||||| |||||||||| |||||||    
T  9030390 gacattataaaatgatttttagaaaatttaattaataaaatg--ataaatgattatataatactttaaaaacacttaatttatt 9030309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 44145823 - 44145768
Alignment:
Q  113 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttagag 168  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||    
T  44145823 gtgagtcctcccctcccttcccctcctaaaccttgaatccaaacacaccctaagag 44145768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 29993841 - 29993924
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||| ||||||||||||||| |||||||||||||||||||||  ||  ||||| ||||||||||||||||| |||| || ||||||    
T  29993841 gacactataaaatgatttttagaaaattgaattaacaacatg--attgatgatgatataatacttcaaaaatacttaatctatttt 29993924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 34995220 - 34995142
Alignment:
Q  4 attataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||| ||||||||||| ||||||||||||||  ||||||||  ||| ||| ||||||||||||||||||||| |||||||||    
T  34995220 attatcaaatgatttttagaaaattgaattaa--acatgata--aataatcttataatacttcaaaaacacttaatttatttt 34995142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 49735512 - 49735465
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 166  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||    
T  49735512 cctcccctcccttcccctcctaaaccctcaatccaaacacacccttag 49735465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 51329966 - 51329887
Alignment:
Q  4 attataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||| |||| | ||||||||||||||||| |||  ||||||||| ||||||||||||||||| |||| |||||||||    
T  51329966 attataaaataatttatagaaaattgaattaacaaaatg--ataaatgattatataatacttcaaaaa-acttaatttatttt 51329887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 56135793 - 56135746
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 166  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||    
T  56135793 cctcccctcccttcccctcctaaaccctcaatccaaacacacccttag 56135746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 11089686 - 11089619
Alignment:
Q  5 ttataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacac 74  Q
    |||||||||  ||||| |||||||||||||||||||| |||  |||||||||||| ||||||||||||||    
T  11089686 ttataaaatattttttagaaaattgaattaacaacatcata--aatgatcatatattacttcaaaaacac 11089619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 44145905 - 44145842
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttc 66  Q
    ||||||||||||||||||||  ||||||||||||||| |||  ||||||||||||| |||||||||    
T  44145905 gacattataaaatgatttttaaaaaattgaattaacagcat--tataaatgatcatgtaatacttc 44145842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 54001176 - 54001246
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacactt 76  Q
    ||||||||||||| ||||||  |||||||||||||||   |||||  |||||||||||||||||||||||||||||    
T  54001176 gacattataaaataatttttaaaaaattgaattaaca---tgata--aatgatcatataatacttcaaaaacactt 54001246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 56135881 - 56135840
Alignment:
Q  45 ataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  56135881 ataaatgatcatataatacttcaaaaacacttaatttatttt 56135840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 49735692 - 49735736
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||    
T  49735692 cctcccctcccttcccctcctaaaccctcaatccaaacacaccct 49735736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 54320634 - 54320678
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||    
T  54320634 cctcccctcccttcccctcctaaaccctcaatccaaacacaccct 54320678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 31348521 - 31348568
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 166  Q
    ||||||||||||||||||| |||||  |||||||||||||||||||||    
T  31348521 cctcccctcccttcccctcctaaactctcaatccaaacacacccttag 31348568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 54935108 - 54935065
Alignment:
Q  122 cccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    |||||||||||||||| |||||| ||||||||||||||||||||    
T  54935108 cccctcccttcccctcctaaaccctcaatccaaacacaccctta 54935065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 165
Target Start/End: Original strand, 1968563 - 1968605
Alignment:
Q  123 ccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  1968563 ccctcccttcccctcctaaaccctcaatccaaacacaccctta 1968605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 165
Target Start/End: Original strand, 6938447 - 6938493
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    |||||||||| |||||||| ||||||||| |||||||||||||||||    
T  6938447 cctcccctccattcccctcataaaccttccatccaaacacaccctta 6938493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 165
Target Start/End: Original strand, 7977697 - 7977743
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    |||||||||| |||||||| |||||| ||||||||||||||||||||    
T  7977697 cctcccctcctttcccctcataaaccctcaatccaaacacaccctta 7977743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 37711182 - 37711136
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    |||||| |||||||||||| |||||| ||||||||||||||||||||    
T  37711182 cctcccttcccttcccctcctaaaccctcaatccaaacacaccctta 37711136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 46007901 - 46007942
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacac 160  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  46007901 cctcccctcccttcccctcctaaaccctcaatccaaacacac 46007942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 37711323 - 37711367
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||||||||||||||| |||||| || |||||||||||||||    
T  37711323 cctcccctcccttcccctcctaaaccctccatccaaacacaccct 37711367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 165
Target Start/End: Original strand, 41174547 - 41174591
Alignment:
Q  121 tcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    ||||||||||||||||| |||||| || |||||||||||||||||    
T  41174547 tcccctcccttcccctcctaaaccctccatccaaacacaccctta 41174591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 51075268 - 51075215
Alignment:
Q  4 attataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatata 59  Q
    |||||||||| ||||||  ||||||||||||||||||||  |||||||||||||||    
T  51075268 attataaaataatttttaaaaaattgaattaacaacatg--ataaatgatcatata 51075215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 54935269 - 54935313
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||||||||||||||| |||||| || |||||||||||||||    
T  54935269 cctcccctcccttcccctcctaaaccctccatccaaacacaccct 54935313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 163
Target Start/End: Original strand, 17182682 - 17182729
Alignment:
Q  116 agtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||||| ||| |||||||| |||||| ||||||||||||||||||    
T  17182682 agtcctcccttcctttcccctcataaaccctcaatccaaacacaccct 17182729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 163
Target Start/End: Complemental strand, 26166980 - 26166937
Alignment:
Q  120 ctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||||| |||||||| |||||| ||||||||||||||||||    
T  26166980 ctcccctccattcccctcctaaaccctcaatccaaacacaccct 26166937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 53260759 - 53260716
Alignment:
Q  122 cccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    |||||||||||||||| |||||| || |||||||||||||||||    
T  53260759 cccctcccttcccctcctaaaccctccatccaaacacaccctta 53260716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 47846256 - 47846298
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacacc 161  Q
    |||||| ||||||| ||||||||||| ||||||||||||||||    
T  47846256 cctcccatcccttctcctcttaaaccctcaatccaaacacacc 47846298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 165
Target Start/End: Complemental strand, 54320475 - 54320433
Alignment:
Q  123 ccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    ||||||||| ||||| |||||| ||||||||||||||||||||    
T  54320475 ccctccctttccctcctaaaccctcaatccaaacacaccctta 54320433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 5730942 - 5730983
Alignment:
Q  45 ataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||||||||||||  |||||| |||||||||    
T  5730942 ataaatgatcatataatacttcaattacacttaatttatttt 5730983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 165
Target Start/End: Original strand, 5731032 - 5731077
Alignment:
Q  120 ctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    |||||||||||||||||| |||||| ||||| ||||||||| ||||    
T  5731032 ctcccctcccttcccctcctaaaccctcaattcaaacacactctta 5731077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 21694960 - 21695040
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatt 84  Q
    |||| ||||||||| |||||   |||||||| |||||| ||||||   ||||||||||||||||||||  |||||| |||||||    
T  21694960 gacactataaaatggtttttaataaattgaaataacaaaatgata---atgatcatataatacttcaatcacacttaatttatt 21695040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 27735877 - 27735836
Alignment:
Q  45 ataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||||||||||||  |||||| |||||||||    
T  27735877 ataaatgatcatataatacttcaatcacacttaatttatttt 27735836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 37711275 - 37711234
Alignment:
Q  45 ataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||||||||||||  |||||| |||||||||    
T  37711275 ataaatgatcatataatacttcaatcacacttaatttatttt 37711234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 163
Target Start/End: Original strand, 4437626 - 4437658
Alignment:
Q  131 tcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||| |||||||||||||||||||||||||    
T  4437626 tcccctcctaaaccttcaatccaaacacaccct 4437658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 165
Target Start/End: Original strand, 14539486 - 14539522
Alignment:
Q  129 cttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    |||||||||||||||| |||||||||||||| |||||    
T  14539486 cttcccctcttaaaccctcaatccaaacacaacctta 14539522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 165
Target Start/End: Complemental strand, 29798322 - 29798286
Alignment:
Q  129 cttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  29798322 cttcccctcctaaaccatcaatccaaacacaccctta 29798286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 37761664 - 37761708
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    |||||||||||||||||| ||||| | || |||||||||||||||    
T  37761664 cctcccctcccttccccttttaaatcctccatccaaacacaccct 37761708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 47433909 - 47433953
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||| ||||||||||||| |||||| |||| |||||||||||||    
T  47433909 cctcctctcccttcccctcctaaaccgtcaacccaaacacaccct 47433953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 55510322 - 55510261
Alignment:
Q  23 aaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||| ||||||||||||   ||||||||||||||||||||   |||||| |||||||||    
T  55510322 aaaattgaaataacaacatgatg--aatgatcatataatacttcagtcacacttaatttatttt 55510261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 51303461 - 51303537
Alignment:
Q  8 taaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  51303461 taaaatgatttttttaaaattgaattaacaacatgata--aatgatcatataatacttcaaaaacacttaatttatttt 51303537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 1085560 - 1085643
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||| |||||||||||| |||||||||| ||||| |||||||  ||||||||||||||||||||||||||||| |||||||||    
T  1085560 gacattagaaaatgatttttagaaaattgaactaacagcatgata--aatgatcatataatacttcaaaaacacttaatttatttt 1085643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 25268435 - 25268355
Alignment:
Q  4 attataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||||| ||||||| ||| |||||| |||||  ||||||||||||||||||||||||||||| |||||||||    
T  25268435 attataaaatgatttttagaaaatttaatcaacaacgtgata--aatgatcatataatacttcaaaaacacttaatttatttt 25268355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 47071225 - 47071142
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||||||||||| ||||||| |||||||||||||  ||||||||||||| |||| ||||||||||||| | |||||||    
T  47071225 gacattataaaatgatttttagaaaatttaattaacaacatg--ataaatgatcataaaatatttcaaaaacacttaacttatttt 47071142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 33643441 - 33643359
Alignment:
Q  2 acattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||| ||||||||||||| |||||||||||||| || |||||   ||||||||||||||||||||||||||||| |||||||||    
T  33643441 acattttaaaatgatttttagaaaattgaattaataatatgatg--aatgatcatataatacttcaaaaacacttaatttatttt 33643359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 35512971 - 35512909
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatactt 65  Q
    |||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||    
T  35512971 gacattataaaatgatttttagaaaattgaattaacaacatg--ataaatgatcatataatactt 35512909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 20607390 - 20607311
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 85  Q
    |||||||||||||||||||||||||||| ||||   ||||||||||  || ||||||||||||||||||||||||| ||||||||    
T  20607390 gacattataaaatgattttttgaaaattaaatt---aacatgatat--attatcatataatacttcaaaaacacttaatttattt 20607311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 35927971 - 35927904
Alignment:
Q  17 tttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||| ||||||||||||||||||||||||  |||||||||||||||||||||||| |||| |||||||||    
T  35927971 ttttagaaaattgaattaacaacatgata--aatgatcatataatacttcaaaaatacttaatttatttt 35927904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 13386989 - 13387071
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 85  Q
    ||||| |||||| ||||||| |||||||||||||||||||||  |||||||||||||||||||   |||||||||| ||||||||    
T  13386989 gacatcataaaacgatttttagaaaattgaattaacaacatg--ataaatgatcatataatacacaaaaaacacttaatttattt 13387071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 2506710 - 2506630
Alignment:
Q  4 attataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||| ||||||  ||||| |||||||||| || |||  ||||||||||||||||||||||||||||| |||||||||    
T  2506710 attataaaataatttttaaaaaatcgaattaacaatataata--aatgatcatataatacttcaaaaacacttaatttatttt 2506630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 40709365 - 40709445
Alignment:
Q  4 attataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||| |||||| ||||||| ||||||| | ||||||  ||||||||||||||||||||||||||||| |||| ||||    
T  40709365 attataaaataatttttagaaaattaaattaacgatatgata--aatgatcatataatacttcaaaaacacttaatttctttt 40709445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 40287325 - 40287407
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 85  Q
    |||||| | |||||| |||| ||||||||||||||||| || |||  |||||| |||||||||||||||||||||| ||||||||    
T  40287325 gacattgtgaaatgagttttagaaaattgaattaacaaaatcata--aatgattatataatacttcaaaaacacttaatttattt 40287407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 163
Target Start/End: Complemental strand, 40709339 - 40709292
Alignment:
Q  116 agtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||    
T  40709339 agtcctcctctcccttcccctcttaaaccttaaatccaaacacaccct 40709292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 26324058 - 26324013
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctt 164  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||    
T  26324058 cctcccctcccttcccctcctaaaccctcaatccaaacacaccctt 26324013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 30010377 - 30010332
Alignment:
Q  118 tcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||    
T  30010377 tcctcccctcccttcccctcctaaaccctcaatccaaacacaccct 30010332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 51303434 - 51303381
Alignment:
Q  113 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 166  Q
    ||||| ||||||||||| ||||||| |||||| |||||||||||||||||||||    
T  51303434 gtgagccctcccctcccctcccctcctaaaccctcaatccaaacacacccttag 51303381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 1344722 - 1344639
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||| ||||||||||||| ||||||||||  |||||||||  |||||| | |||||| ||| |||||||||||| |||| ||||    
T  1344722 gacattgtaaaatgatttttagaaaattgaaccaacaacatg--ataaataaacatatattacatcaaaaacacttaatttttttt 1344639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 165
Target Start/End: Complemental strand, 12234050 - 12234008
Alignment:
Q  123 ccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  12234050 ccctcccttcccctcctaaaccctcaatccaaacacaccctta 12234008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 17622689 - 17622630
Alignment:
Q  23 aaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatt 84  Q
    ||||||||||||| |||||||||  | ||||||||||||||||| ||||||||| |||||||    
T  17622689 aaaattgaattaataacatgata--agtgatcatataatacttctaaaacacttaatttatt 17622630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 165
Target Start/End: Original strand, 20607417 - 20607463
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    ||||||||||||||||||| |||||| || |||||||||||||||||    
T  20607417 cctcccctcccttcccctcctaaaccctccatccaaacacaccctta 20607463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 33643318 - 33643268
Alignment:
Q  113 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||| |||| |||||||||||| ||||||||||||| |||||||||||    
T  33643318 gtgagtcatcccttcccttcccctcctaaaccttcaatctaaacacaccct 33643268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 41498448 - 41498402
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    ||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  41498448 cctcccctcacttcccctcctaaaccctcaatccaaacacaccctta 41498402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 525175 - 525252
Alignment:
Q  6 tataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||| |||||| |||| |||||||||||| ||||||  |||||| ||||||||||||||| | |||| |||||||||    
T  525175 tataaaataatttttagaaa-ttgaattaacaatatgata--aatgattatataatacttcaaacaaacttaatttatttt 525252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 2859132 - 2859169
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaac 156  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  2859132 cctcccctcccttcccctcctaaaccttcaatccaaac 2859169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 50079496 - 50079537
Alignment:
Q  45 ataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  50079496 ataaatgatcatataatactttaaaaacacttaatttatttt 50079537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 1085536 - 1085484
Alignment:
Q  116 agtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttagag 168  Q
    ||||||||||||| | |||||| |||||| || ||||||||||||||||||||    
T  1085536 agtcctcccctccatccccctcctaaaccctccatccaaacacacccttagag 1085484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 35349662 - 35349706
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||    
T  35349662 cctcccctcccttcccctcataaacccttaatccaaacacaccct 35349706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 35927864 - 35927812
Alignment:
Q  113 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    ||||| |||||||||| |||||||| |||| | ||||||||||||||||||||    
T  35927864 gtgagccctcccctccattcccctcctaaaacctcaatccaaacacaccctta 35927812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 30010532 - 30010579
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 166  Q
    ||||||||||||||||||  |||||| || ||||||||||||||||||    
T  30010532 cctcccctcccttccccttctaaaccctccatccaaacacacccttag 30010579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 38510094 - 38510141
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 166  Q
    ||||||||||||||||||| |||||| | ||||||||||||| |||||    
T  38510094 cctcccctcccttcccctcctaaacccttaatccaaacacactcttag 38510141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 1085684 - 1085734
Alignment:
Q  113 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||| || |||||||||||||| |||||| || |||||||||||||||    
T  1085684 gtgagtcatctcctcccttcccctcctaaaccctctatccaaacacaccct 1085734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 12234210 - 12234252
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacacc 161  Q
    ||||||||||||||||||| |||||| || |||||||||||||    
T  12234210 cctcccctcccttcccctcctaaaccctccatccaaacacacc 12234252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 40094977 - 40094928
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttagag 168  Q
    |||||||| |||||||||| |||||| || ||||||||||||||| ||||    
T  40094977 cctccccttccttcccctcctaaaccctccatccaaacacaccctaagag 40094928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 52707818 - 52707736
Alignment:
Q  2 acattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||| |||| ||||||| |||| |  | |||||||||||||  |||||| ||||||||||||||||| || | |||||||||    
T  52707818 acattatcaaataatttttttaaaaatttaataacaacatgata--aatgatgatataatacttcaaaaatacataatttatttt 52707736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 2858976 - 2858932
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||||||||| ||||| |||||| || |||||||||||||||    
T  2858976 cctcccctccctttccctcctaaaccctccatccaaacacaccct 2858932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 160
Target Start/End: Complemental strand, 20576176 - 20576136
Alignment:
Q  120 ctcccctcccttcccctcttaaaccttcaatccaaacacac 160  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  20576176 ctcccctcccttcccctcctaaaccctctatccaaacacac 20576136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 20607263 - 20607223
Alignment:
Q  123 ccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||||||||||| |||||| ||||| ||||||||||||    
T  20607263 ccctcccttcccctcctaaaccctcaattcaaacacaccct 20607223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 35512997 - 35513037
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacaca 159  Q
    ||||||||||||||||||| |||||| || |||||||||||    
T  35512997 cctcccctcccttcccctcctaaaccctccatccaaacaca 35513037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 38509938 - 38509894
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||| ||||||||||||| |||||| || |||||||||||||||    
T  38509938 cctcctctcccttcccctcctaaaccctctatccaaacacaccct 38509894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 44210997 - 44211058
Alignment:
Q  23 aaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||| || |||||||||||||  || ||||||||||||||||||  |||||| |||||||||    
T  44210997 aaaattaaaataacaacatgata--aacgatcatataatacttcaatcacacttaatttatttt 44211058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 15353537 - 15353456
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 85  Q
    |||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||| |||||||||||| ||||||||    
T  15353537 gacattataaaatgatttttagaaaattgaattaacaacat--tataaatgatcatataatacatcaaaaacactt-atttattt 15353456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 15323399 - 15323316
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||||||||||| |||||||||||||||||||||  | ||||||||||||||||| ||| |||||||| |||||||||    
T  15323399 gacattataaaatgatttttagaaaattgaattaacaacatg--acaaatgatcatataatacatcagaaacacttaatttatttt 15323316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 26318475 - 26318396
Alignment:
Q  5 ttataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||| |||| ||||||||||||||||||||||||  | ||||||||||||||||||||||||||| |||||||||    
T  26318475 ttataaaatgacttttagaaaattgaattaacaacatgata--attgatcatataatacttcaaaaacacttaatttatttt 26318396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 4097305 - 4097388
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||||  ||||| |||||||||||||||||||||  ||||||||||||| |||||||| ||||||||| |||||||||    
T  4097305 gacattataaaatattttttagaaaattgaattaacaacatg--ataaatgatcatacaatacttccaaaacacttaatttatttt 4097388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 9051607 - 9051686
Alignment:
Q  4 attataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 85  Q
    ||||||||||||||||| |||||||||||||||||||||  ||||||||||||||  ||||| |||||||||| ||||||||    
T  9051607 attataaaatgatttttagaaaattgaattaacaacatg--ataaatgatcatatgctactttaaaaacacttaatttattt 9051686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 31799092 - 31799025
Alignment:
Q  4 attataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaaca 73  Q
    |||||||||| ||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  31799092 attataaaataattttttaaaaattgaattaacaacatg--ataaatgatcatataatacttcaaaaaca 31799025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 15373669 - 15373739
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaaca 73  Q
    |||||||||||||||||||| |||||||||||||||||||||  | ||||||||||||||||| |||||||||    
T  15373669 gacattataaaatgatttttagaaaattgaattaacaacatg--acaaatgatcatataatacatcaaaaaca 15373739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 3841260 - 3841176
Alignment:
Q  1 gacattataaaatgattttttga--aaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||||||||| |  ||||||||||||||| ||||||  |||||| |||||||||||||||||||||| |||||||||    
T  3841260 gacattataaaatgatttttttacaaaattgaattaacaa-atgata--aatgatgatataatacttcaaaaacacttaatttatttt 3841176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 23091045 - 23090993
Alignment:
Q  113 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  23091045 gtgagccctcccctcccttcccctcctaaaccttcaatccaaacacaccctta 23090993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 9721182 - 9721136
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  9721182 cctcccctcccttcccctcctaaaccttcaatccaaacacaccctta 9721136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 25468469 - 25468552
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||| |||||  ||||||| | |||||||| |||||  |||||| |||||||||||||||||||||| |||||||||    
T  25468469 gacattataaaataattttaagaaaattaatttaacaacgtgata--aatgattatataatacttcaaaaacacttaatttatttt 25468552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 14515517 - 14515468
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttagag 168  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  14515517 cctcccctcccttcccctcctaaaccctcaatccaaacacacccttagag 14515468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 165
Target Start/End: Original strand, 9051734 - 9051778
Alignment:
Q  121 tcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  9051734 tcccctcccttcccctcttaaaccctcaatccaaacacaccctta 9051778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 10293419 - 10293354
Alignment:
Q  4 attataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaa 71  Q
    ||||||||||||||||| ||||| |||||| |||||||   |||||| ||||||||||||||||||||    
T  10293419 attataaaatgatttttagaaaactgaattgacaacat--cataaataatcatataatacttcaaaaa 10293354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 165
Target Start/End: Complemental strand, 10818271 - 10818227
Alignment:
Q  121 tcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||    
T  10818271 tcccctcccttcccctcctaaaccctcaatccaaacacaccctta 10818227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 165
Target Start/End: Complemental strand, 9719076 - 9719029
Alignment:
Q  118 tcctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    |||||||||||||||||||| |||||| ||||||||||||||| ||||    
T  9719076 tcctcccctcccttcccctcctaaaccctcaatccaaacacacgctta 9719029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 30487350 - 30487304
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    ||||||||||||||||||| |||||| || |||||||||||||||||    
T  30487350 cctcccctcccttcccctcctaaaccctccatccaaacacaccctta 30487304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 31849154 - 31849104
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttagaga 169  Q
    |||||||||||||||||||||||||| ||||||| ||||||| || |||||    
T  31849154 cctcccctcccttcccctcttaaaccctcaatcctaacacactctaagaga 31849104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 34176644 - 34176711
Alignment:
Q  4 attataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaaca 73  Q
    |||||||| ||||||||  |||||||||||||||| || |||  ||||||||||||||| ||||||||||    
T  34176644 attataaattgatttttaaaaaattgaattaacaatataata--aatgatcatataatatttcaaaaaca 34176711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 160
Target Start/End: Original strand, 4097717 - 4097754
Alignment:
Q  123 ccctcccttcccctcttaaaccttcaatccaaacacac 160  Q
    |||||||||||||||||||||| |||||||||||||||    
T  4097717 ccctcccttcccctcttaaaccctcaatccaaacacac 4097754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 4097270 - 4097230
Alignment:
Q  128 ccttcccctcttaaaccttcaatccaaacacacccttagag 168  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  4097270 ccttcccctcctaaaccctcaatccaaacacacccttagag 4097230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 163
Target Start/End: Complemental strand, 15323264 - 15323225
Alignment:
Q  124 cctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  15323264 cctcccttcccctcctaaaccctcaatccaaacacaccct 15323225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 163
Target Start/End: Complemental strand, 15353403 - 15353364
Alignment:
Q  124 cctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  15353403 cctcccttcccctcctaaaccctcaatccaaacacaccct 15353364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 19278237 - 19278278
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacac 160  Q
    ||||||||||||||||||| |||||  |||||||||||||||    
T  19278237 cctcccctcccttcccctcctaaactctcaatccaaacacac 19278278  T

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Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 29693010 - 29692969
Alignment:
Q  45 ataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||||||||||| ||||||||||||||||||| |||| ||||    
T  29693010 ataaatgatcatgtaatacttcaaaaacacttaatttgtttt 29692969  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 9719233 - 9719273
Alignment:
Q  122 cccctcccttcccctcttaaaccttcaatccaaacacaccc 162  Q
    |||||| ||||||||| |||||| |||||||||||||||||    
T  9719233 cccctctcttcccctcataaaccctcaatccaaacacaccc 9719273  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 12811180 - 12811224
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    ||||||||| |||||| || |||||| ||||||||||||||||||    
T  12811180 cctcccctctcttcccatcctaaaccctcaatccaaacacaccct 12811224  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 25468585 - 25468633
Alignment:
Q  113 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacc 161  Q
    |||| |||| ||||||||| |||||||||||| | ||||||||||||||    
T  25468585 gtgaatccttccctcccttaccctcttaaaccattaatccaaacacacc 25468633  T

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Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 28477112 - 28477076
Alignment:
Q  45 ataaatgatcatataatacttcaaaaacacttcattt 81  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  28477112 ataaatgatcatgtaatacttcaaaaacacttaattt 28477076  T

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Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 32926777 - 32926737
Alignment:
Q  45 ataaatgatcatataatacttcaaaaacacttcatttattt 85  Q
    ||||||||||||||||||||||||  |||||| ||||||||    
T  32926777 ataaatgatcatataatacttcaatcacacttaatttattt 32926737  T

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Target: scaffold0012 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 184781 - 184698
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttc-aaaaacacttcatttattt 85  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||  || ||||||||||||||| |||||||||| ||||||||    
T  184781 gacattataaaatgatttttttaaaattgaattaacaacatgatat--attatcatataatacttcaaaaaacacttaatttattt 184698  T

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Target: scaffold0071 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 53057 - 52977
Alignment:
Q  3 cattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 85  Q
    |||||| |||||||||||||||||||||| ||||||||||  |||||||||||||||||| ||||||||||||| || |||||    
T  53057 cattatgaaatgattttttgaaaattgaactaacaacatg--ataaatgatcatataatatttcaaaaacacttaatgtattt 52977  T

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Target: scaffold0007 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 242390 - 242307
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||||||||||||||  |||||||||||||| |||||  ||||||||| |||||||| |||||||| ||||||||||||||    
T  242390 gacattataaaatgatttttaaaaaattgaattaacgacatg--ataaatgatgatataataattcaaaaatacttcatttatttt 242307  T

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Target: scaffold0240 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 17711 - 17641
Alignment:
Q  4 attataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacactt 76  Q
    ||||||||||||||||||||||||||||||| |||||||  |||||| |||||||||||||||||| ||||||    
T  17711 attataaaatgattttttgaaaattgaattagcaacatg--ataaataatcatataatacttcaaatacactt 17641  T

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Target: scaffold0240; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 17741 - 17787
Alignment:
Q  122 cccctcccttcccctcttaaaccttcaatccaaacacacccttagag 168  Q
    |||||||||||| ||| |||||| || ||||||||||||||||||||    
T  17741 cccctcccttccactcctaaaccctccatccaaacacacccttagag 17787  T

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Target: scaffold0026 (Bit Score: 50; Significance: 9e-20; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 1467 - 1549
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 85  Q
    ||||||||| |||||||||| |||||||||||||||||| ||  ||||||||||||||||||||| ||||| |||| ||||||||    
T  1467 gacattatagaatgatttttagaaaattgaattaacaacttg--ataaatgatcatataatacttaaaaaatacttaatttattt 1549  T

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Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 160
Target Start/End: Complemental strand, 1215 - 1175
Alignment:
Q  120 ctcccctcccttcccctcttaaaccttcaatccaaacacac 160  Q
    |||||||| ||||||||| |||||| |||||||||||||||    
T  1215 ctcccctctcttcccctcctaaaccctcaatccaaacacac 1175  T

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Target: scaffold0026; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 1592 - 1644
Alignment:
Q  113 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    ||||| |||||||||| |||| ||| |||||| ||||| ||||||||||||||    
T  1592 gtgagccctcccctccattcctctcctaaaccctcaattcaaacacaccctta 1644  T

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Target: scaffold0095 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 8317 - 8241
Alignment:
Q  5 ttataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttat 83  Q
    ||||||||| ||||||  ||||||||||||||||||||||   |||||||||||||||||||||||||| || ||||||    
T  8317 ttataaaattatttttaaaaaattgaattaacaacatgatt--aatgatcatataatacttcaaaaacagttaatttat 8241  T

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Target: scaffold0119 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 37557 - 37474
Alignment:
Q  1 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    |||| ||||| ||||||||| ||||| | ||||||||||||||||  | ||||||||||| ||||||||||||||| |||||||||    
T  37557 gacaatataagatgatttttagaaaacttaattaacaacatgata--agtgatcatataacacttcaaaaacacttgatttatttt 37474  T

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Target: scaffold1414 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1414
Description:

Target: scaffold1414; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 473 - 402
Alignment:
Q  4 attataaaatgattttttgaaaattgaa-ttaacaacatgatataaatgatcatataatacttcaaaaacactt 76  Q
    ||||||||||||||||| ||||||| || |||||| |||||||  |||||| ||| ||||||||||||||||||    
T  473 attataaaatgatttttagaaaattaaaattaacagcatgata--aatgataataaaatacttcaaaaacactt 402  T

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Target: scaffold0096 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 6628 - 6584
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 163  Q
    |||||||||||||| |||| |||| ||||||||||||||||||||    
T  6628 cctcccctcccttctcctcctaaaacttcaatccaaacacaccct 6584  T

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Target: scaffold0067 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 165
Target Start/End: Original strand, 39390 - 39436
Alignment:
Q  119 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 165  Q
    ||||||||||||| ||||  |||||| ||||||||||||||||||||    
T  39390 cctcccctccctttcccttctaaaccctcaatccaaacacaccctta 39436  T

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Target: scaffold0198 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 160
Target Start/End: Complemental strand, 3190 - 3150
Alignment:
Q  120 ctcccctcccttcccctcttaaaccttcaatccaaacacac 160  Q
    |||||||||||||||||| |||||  |||||||||||||||    
T  3190 ctcccctcccttcccctcctaaactctcaatccaaacacac 3150  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 81503 - 81564
Alignment:
Q  23 aaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 86  Q
    ||||||||| ||| |||||||||  |||||||||||||||||||||  | |||| |||||||||    
T  81503 aaaattgaaataataacatgata--aatgatcatataatacttcaatcatacttgatttatttt 81564  T

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