View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4774-Insertion-16 (Length: 577)
Name: NF4774-Insertion-16
Description: NF4774
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4774-Insertion-16 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 529; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 529; E-Value: 0
Query Start/End: Original strand, 8 - 577
Target Start/End: Complemental strand, 46559277 - 46558708
Alignment:
| Q |
8 |
cgctgagctacaaattagagtcaccgcttattaacacagtgctacaaattttgcttgtatttaccttgcacttctcatgcgaatgttgtggcaggcaatg |
107 |
Q |
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| T |
46559277 |
cgctgagctacaaattagagtcaccgcttattaacacactgctacaaattttgcttgtatttaccttgcacttctcatgcgagtgttgtggcaggcaatg |
46559178 |
T |
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| Q |
108 |
tgtaattgtgtactcttctctgattgttagttagatttggagcggttttgcacatttatgctagtttgcttatnnnnnnntaaaacttttggaaacctct |
207 |
Q |
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| T |
46559177 |
tgtaattgtgtactcttctctgattgttagttagatttggagcggttttgcacatttatgctagtttgcttataaaaaaataaaacttttggaaacctct |
46559078 |
T |
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| Q |
208 |
atggataaaaaatgcatttttggttacaaaacatacttacataatgtaatgataatgggtatgcaaatgtaacgataaatggtgtgtacttctttccttt |
307 |
Q |
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| T |
46559077 |
atggataaaaaatgcatttttggttacaaaacatactcacataatgtaatgataatgggtatgcaaatgtaaagataaatggtgtgtacttctttccttt |
46558978 |
T |
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| Q |
308 |
cttttttcgaaggcaaaagagaattttattactcaagaagaagatatcatctattcatgggtcacagaaagataatatggaatcagtttgactattcaaa |
407 |
Q |
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| T |
46558977 |
cttttttcgaaggcaaaagagaattttattactcaagaagaagatatcacctattcatgggtcacagaaagataatatggaatcagtttgactattcaaa |
46558878 |
T |
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| Q |
408 |
cctggcctcgcaaaaggtaaggtgaaggtctacatacatagctaattcaccctacatccatcctaatggtccttaaggttaatctcacatgtaatgtaag |
507 |
Q |
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| T |
46558877 |
cctggcctcgcaaaaggtaaggtgaaggtctacatacatagctaattcaccctacatccatcctaatggtccttaaggttaatctcacatgtaatgtaag |
46558778 |
T |
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| Q |
508 |
gtgatgttacttacttcttttgcgcaagttagtcctctctcaagctcctgatattttatctcaagtctag |
577 |
Q |
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| T |
46558777 |
gtgatgttacttacttcttttgcgcaagttagtcctctctcaagctcctgatattttatctcaagtctag |
46558708 |
T |
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