View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4774-Insertion-3 (Length: 968)

Name: NF4774-Insertion-3
Description: NF4774
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4774-Insertion-3
NF4774-Insertion-3
[»] chr4 (104 HSPs)
chr4 (278-968)||(9590244-9590932)
chr4 (358-832)||(44973695-44974167)
chr4 (428-796)||(50132734-50133101)
chr4 (434-685)||(27383714-27383966)
chr4 (618-836)||(39294325-39294549)
chr4 (618-764)||(230872-231017)
chr4 (7-86)||(9567760-9567845)
chr4 (97-177)||(53356966-53357046)
chr4 (98-177)||(51540737-51540816)
chr4 (99-177)||(39880921-39880999)
chr4 (97-177)||(4489688-4489768)
chr4 (510-595)||(6999141-6999227)
chr4 (618-720)||(13438278-13438379)
chr4 (418-569)||(230519-230671)
chr4 (7-76)||(9590158-9590233)
chr4 (97-177)||(29406926-29407006)
chr4 (233-281)||(33820363-33820411)
chr4 (233-279)||(12241056-12241102)
chr4 (233-278)||(9472540-9472585)
chr4 (96-177)||(17805554-17805635)
chr4 (279-327)||(9567532-9567580)
chr4 (101-177)||(30890178-30890254)
chr4 (666-834)||(37478224-37478394)
chr4 (233-277)||(53357104-53357148)
chr4 (233-280)||(1562563-1562610)
chr4 (618-720)||(13449880-13449981)
chr4 (236-278)||(40755920-40755962)
chr4 (95-177)||(55996522-55996604)
chr4 (233-277)||(149314-149358)
chr4 (233-277)||(3968885-3968929)
chr4 (233-277)||(4489825-4489869)
chr4 (97-177)||(12241160-12241239)
chr4 (233-277)||(25523225-25523269)
chr4 (896-968)||(27383144-27383214)
chr4 (752-836)||(27383336-27383419)
chr4 (97-177)||(43759069-43759149)
chr4 (233-281)||(46844268-46844316)
chr4 (239-279)||(53662461-53662501)
chr4 (233-277)||(55996422-55996466)
chr4 (239-282)||(47288077-47288120)
chr4 (233-280)||(55595946-55595993)
chr4 (233-279)||(6290460-6290506)
chr4 (636-742)||(7150218-7150323)
chr4 (233-279)||(52891877-52891923)
chr4 (233-283)||(54165188-54165238)
chr4 (127-173)||(56025362-56025408)
chr4 (233-278)||(12074178-12074223)
chr4 (233-278)||(12638824-12638869)
chr4 (127-172)||(22920190-22920235)
chr4 (127-172)||(22971564-22971609)
chr4 (96-177)||(40756023-40756104)
chr4 (239-280)||(42815401-42815442)
chr4 (233-274)||(43759178-43759219)
chr4 (233-274)||(46364006-46364047)
chr4 (233-278)||(47998593-47998638)
chr4 (233-282)||(49424847-49424896)
chr4 (233-282)||(53583155-53583204)
chr4 (239-279)||(940292-940332)
chr4 (233-277)||(25725721-25725765)
chr4 (531-583)||(25994964-25995016)
chr4 (233-277)||(39881057-39881101)
chr4 (233-281)||(43358609-43358657)
chr4 (97-177)||(45274365-45274445)
chr4 (233-281)||(49768896-49768944)
chr4 (233-277)||(54251477-54251521)
chr4 (238-277)||(9776364-9776403)
chr4 (234-281)||(22920299-22920346)
chr4 (234-281)||(22971453-22971500)
chr4 (238-277)||(29407058-29407097)
chr4 (239-278)||(32696822-32696861)
chr4 (97-172)||(43358720-43358795)
chr4 (236-279)||(43608073-43608116)
chr4 (233-280)||(44170646-44170693)
chr4 (140-175)||(46363912-46363947)
chr4 (233-280)||(48743707-48743754)
chr4 (233-280)||(51389313-51389360)
chr4 (239-278)||(53463103-53463142)
chr4 (239-285)||(4577549-4577595)
chr4 (95-173)||(5234358-5234436)
chr4 (418-472)||(6999254-6999308)
chr4 (237-279)||(11546933-11546975)
chr4 (239-277)||(15984782-15984820)
chr4 (135-173)||(20956509-20956547)
chr4 (239-277)||(31469022-31469060)
chr4 (127-173)||(33438151-33438197)
chr4 (233-279)||(35661624-35661670)
chr4 (233-283)||(38844517-38844567)
chr4 (233-279)||(42853937-42853983)
chr4 (251-285)||(43434339-43434373)
chr4 (239-281)||(44257763-44257805)
chr4 (358-404)||(50131185-50131231)
chr4 (140-177)||(1562468-1562505)
chr4 (244-277)||(4974111-4974144)
chr4 (233-278)||(10994179-10994224)
chr4 (531-595)||(13450148-13450213)
chr4 (239-280)||(20760252-20760293)
chr4 (239-280)||(20766643-20766684)
chr4 (127-172)||(25539967-25540012)
chr4 (233-278)||(31147230-31147275)
chr4 (244-277)||(33776851-33776884)
chr4 (233-278)||(35017152-35017197)
chr4 (233-274)||(35580129-35580170)
chr4 (251-280)||(44272855-44272884)
chr4 (233-278)||(45779318-45779363)
[»] chr3 (80 HSPs)
chr3 (482-796)||(17260444-17260757)
chr3 (346-796)||(5127075-5127527)
chr3 (347-796)||(5134330-5134781)
chr3 (345-839)||(54093750-54094244)
chr3 (346-796)||(41624991-41625431)
chr3 (832-967)||(7589773-7589906)
chr3 (858-966)||(17260338-17260444)
chr3 (391-605)||(7589330-7589550)
chr3 (97-177)||(40159715-40159795)
chr3 (715-796)||(7589618-7589699)
chr3 (628-739)||(32843664-32843774)
chr3 (96-177)||(11335190-11335271)
chr3 (97-177)||(31017286-31017365)
chr3 (97-177)||(51032515-51032595)
chr3 (98-177)||(41369681-41369760)
chr3 (841-968)||(22219594-22219716)
chr3 (233-280)||(40159865-40159912)
chr3 (668-785)||(35862704-35862821)
chr3 (346-414)||(5133007-5133075)
chr3 (233-281)||(47988512-47988560)
chr3 (233-281)||(47997799-47997847)
chr3 (233-281)||(48007086-48007134)
chr3 (233-277)||(48179080-48179124)
chr3 (896-968)||(54093584-54093654)
chr3 (666-785)||(22219229-22219348)
chr3 (346-404)||(5125812-5125870)
chr3 (233-279)||(11335329-11335375)
chr3 (531-595)||(26447934-26447999)
chr3 (233-278)||(51032651-51032696)
chr3 (509-595)||(30501281-30501369)
chr3 (233-284)||(5398911-5398962)
chr3 (233-288)||(26279873-26279928)
chr3 (233-280)||(39604273-39604320)
chr3 (94-165)||(43176309-43176380)
chr3 (239-278)||(49761219-49761258)
chr3 (236-274)||(30251010-30251048)
chr3 (237-279)||(39350603-39350645)
chr3 (238-280)||(50745366-50745408)
chr3 (135-176)||(13724337-13724378)
chr3 (626-703)||(30501717-30501793)
chr3 (239-280)||(37894276-37894317)
chr3 (233-274)||(41369600-41369641)
chr3 (239-280)||(45186585-45186626)
chr3 (97-173)||(2812387-2812463)
chr3 (233-277)||(31017421-31017465)
chr3 (233-277)||(37134633-37134677)
chr3 (97-177)||(39350458-39350538)
chr3 (348-404)||(41623665-41623721)
chr3 (251-283)||(50559257-50559289)
chr3 (233-277)||(55466958-55467002)
chr3 (251-282)||(7867756-7867787)
chr3 (97-176)||(22153967-22154046)
chr3 (233-280)||(22813069-22813116)
chr3 (233-280)||(35376578-35376625)
chr3 (238-277)||(45205288-45205327)
chr3 (233-280)||(45528969-45529016)
chr3 (233-280)||(47849669-47849716)
chr3 (479-569)||(49494621-49494712)
chr3 (233-280)||(51410803-51410850)
chr3 (233-280)||(53932418-53932465)
chr3 (233-279)||(108429-108475)
chr3 (95-173)||(28300533-28300611)
chr3 (95-173)||(29706009-29706087)
chr3 (233-279)||(32008031-32008077)
chr3 (233-279)||(37215258-37215304)
chr3 (239-281)||(38363254-38363296)
chr3 (534-595)||(40963208-40963270)
chr3 (239-277)||(48944743-48944781)
chr3 (239-277)||(52714733-52714771)
chr3 (251-280)||(884531-884560)
chr3 (239-284)||(16267930-16267975)
chr3 (240-277)||(23869001-23869038)
chr3 (239-280)||(46344411-46344452)
chr3 (120-173)||(46473234-46473287)
chr3 (140-177)||(47988417-47988454)
chr3 (140-177)||(47997704-47997741)
chr3 (140-177)||(48006991-48007028)
chr3 (233-274)||(48649583-48649624)
chr3 (127-172)||(52678512-52678557)
chr3 (128-177)||(55196441-55196490)
[»] chr7 (74 HSPs)
chr7 (346-833)||(6058062-6058550)
chr7 (346-796)||(25971691-25972143)
chr7 (347-796)||(46866477-46866927)
chr7 (347-605)||(43009494-43009753)
chr7 (802-968)||(48456934-48457098)
chr7 (618-763)||(11683380-11683524)
chr7 (346-836)||(31914666-31915151)
chr7 (413-583)||(11685481-11685652)
chr7 (97-177)||(21153154-21153234)
chr7 (97-177)||(36920887-36920967)
chr7 (105-177)||(42640945-42641017)
chr7 (103-177)||(27075570-27075644)
chr7 (103-177)||(27202667-27202741)
chr7 (94-177)||(33212128-33212211)
chr7 (433-836)||(23965689-23966093)
chr7 (97-175)||(44596033-44596111)
chr7 (97-177)||(27330916-27330996)
chr7 (233-285)||(27331054-27331106)
chr7 (509-595)||(34784951-34785039)
chr7 (236-279)||(42276089-42276132)
chr7 (628-742)||(13035618-13035731)
chr7 (693-747)||(19710603-19710657)
chr7 (623-705)||(34784792-34784873)
chr7 (803-968)||(367223-367383)
chr7 (233-277)||(33212042-33212086)
chr7 (509-595)||(34784203-34784291)
chr7 (824-968)||(6057862-6058000)
chr7 (346-404)||(6056777-6056835)
chr7 (103-177)||(23848178-23848252)
chr7 (669-742)||(7402695-7402768)
chr7 (233-274)||(42640846-42640887)
chr7 (233-281)||(40077250-40077298)
chr7 (623-742)||(367566-367684)
chr7 (239-282)||(46829474-46829517)
chr7 (233-279)||(9055265-9055311)
chr7 (127-173)||(17157239-17157285)
chr7 (233-283)||(36920798-36920847)
chr7 (233-283)||(38096466-38096516)
chr7 (239-277)||(42598241-42598279)
chr7 (358-404)||(46867989-46868035)
chr7 (238-279)||(6822554-6822595)
chr7 (233-278)||(25940659-25940704)
chr7 (239-276)||(44496836-44496873)
chr7 (97-173)||(17500803-17500879)
chr7 (97-173)||(17552335-17552411)
chr7 (233-277)||(21037261-21037305)
chr7 (233-281)||(28824499-28824547)
chr7 (239-279)||(35823008-35823048)
chr7 (233-277)||(40212516-40212560)
chr7 (233-277)||(42476572-42476616)
chr7 (240-280)||(43213316-43213356)
chr7 (236-279)||(2005730-2005773)
chr7 (233-276)||(2756956-2756999)
chr7 (233-276)||(2790178-2790221)
chr7 (94-173)||(12141990-12142069)
chr7 (509-583)||(36756735-36756810)
chr7 (509-583)||(36762532-36762607)
chr7 (509-583)||(36766259-36766334)
chr7 (233-283)||(19426574-19426624)
chr7 (233-275)||(21153052-21153094)
chr7 (251-281)||(27704431-27704461)
chr7 (233-278)||(30769688-30769731)
chr7 (233-279)||(41966330-41966376)
chr7 (666-747)||(2168014-2168095)
chr7 (244-281)||(19510384-19510421)
chr7 (251-280)||(23389638-23389667)
chr7 (233-278)||(27075469-27075514)
chr7 (233-278)||(27202797-27202842)
chr7 (233-274)||(34304705-34304746)
chr7 (244-281)||(39497340-39497377)
chr7 (233-278)||(40693555-40693600)
chr7 (244-281)||(41590558-41590595)
chr7 (239-280)||(47012603-47012644)
chr7 (233-282)||(47905143-47905192)
[»] chr2 (83 HSPs)
chr2 (487-815)||(40098883-40099212)
chr2 (418-835)||(4415256-4415671)
chr2 (358-807)||(14001112-14001560)
chr2 (555-841)||(62133-62422)
chr2 (618-763)||(363208-363351)
chr2 (433-834)||(32607277-32607682)
chr2 (618-740)||(40150916-40151037)
chr2 (346-836)||(859988-860480)
chr2 (666-834)||(15806442-15806612)
chr2 (666-834)||(39282438-39282608)
chr2 (101-175)||(4723670-4723744)
chr2 (481-594)||(17948758-17948872)
chr2 (358-527)||(59860-60029)
chr2 (802-951)||(40098682-40098826)
chr2 (618-738)||(40151907-40152026)
chr2 (97-177)||(43057552-43057632)
chr2 (532-595)||(11313039-11313103)
chr2 (94-177)||(41868255-41868338)
chr2 (233-274)||(19631389-19631430)
chr2 (233-274)||(19828290-19828331)
chr2 (96-177)||(44059503-44059584)
chr2 (233-281)||(1889143-1889191)
chr2 (233-277)||(11980651-11980695)
chr2 (233-277)||(31635837-31635881)
chr2 (233-277)||(34372847-34372891)
chr2 (233-280)||(13466102-13466149)
chr2 (346-404)||(13999818-13999876)
chr2 (233-279)||(14797677-14797723)
chr2 (238-276)||(17159567-17159605)
chr2 (239-281)||(18531597-18531639)
chr2 (346-404)||(25757392-25757450)
chr2 (95-177)||(31635697-31635779)
chr2 (239-280)||(6336249-6336290)
chr2 (233-286)||(14140364-14140417)
chr2 (233-278)||(16754395-16754440)
chr2 (236-277)||(17917389-17917430)
chr2 (98-175)||(17917493-17917570)
chr2 (244-285)||(40700199-40700240)
chr2 (666-742)||(161213-161289)
chr2 (418-569)||(363548-363699)
chr2 (841-949)||(4046827-4046931)
chr2 (233-281)||(10749706-10749754)
chr2 (97-177)||(16051278-16051357)
chr2 (246-278)||(23045092-23045124)
chr2 (618-789)||(26581763-26581934)
chr2 (97-173)||(29192538-29192614)
chr2 (233-277)||(32688571-32688615)
chr2 (233-277)||(33857217-33857261)
chr2 (233-285)||(36132966-36133018)
chr2 (896-947)||(62516-62566)
chr2 (233-280)||(1876314-1876361)
chr2 (244-279)||(4138212-4138247)
chr2 (239-278)||(4319768-4319807)
chr2 (233-280)||(7498018-7498065)
chr2 (233-280)||(8352832-8352879)
chr2 (233-284)||(10288143-10288194)
chr2 (239-278)||(14871639-14871678)
chr2 (98-177)||(36795832-36795911)
chr2 (233-284)||(39737713-39737764)
chr2 (239-278)||(44484689-44484728)
chr2 (233-279)||(1052523-1052569)
chr2 (135-173)||(6851586-6851624)
chr2 (238-284)||(7667105-7667151)
chr2 (433-527)||(15806210-15806304)
chr2 (127-173)||(17267578-17267624)
chr2 (239-277)||(21738649-21738687)
chr2 (358-404)||(40097571-40097617)
chr2 (233-279)||(43994040-43994086)
chr2 (234-279)||(3585624-3585669)
chr2 (127-172)||(3585733-3585778)
chr2 (233-282)||(4738599-4738648)
chr2 (233-278)||(6365185-6365230)
chr2 (233-278)||(11442671-11442716)
chr2 (239-276)||(14876707-14876744)
chr2 (140-173)||(30413664-30413697)
chr2 (896-953)||(32607806-32607862)
chr2 (96-173)||(36909731-36909808)
chr2 (240-273)||(37109278-37109311)
chr2 (896-953)||(39282256-39282312)
chr2 (127-172)||(39744513-39744558)
chr2 (345-386)||(40099283-40099324)
chr2 (239-280)||(40358145-40358186)
chr2 (245-282)||(43057670-43057707)
[»] chr1 (76 HSPs)
chr1 (346-796)||(43869942-43870394)
chr1 (433-834)||(51545917-51546318)
chr1 (666-787)||(42559119-42559240)
chr1 (97-177)||(10302232-10302312)
chr1 (618-785)||(3370302-3370468)
chr1 (233-279)||(45042259-45042305)
chr1 (97-177)||(11570252-11570332)
chr1 (824-968)||(23172559-23172697)
chr1 (233-283)||(15182610-15182660)
chr1 (100-177)||(32811756-32811833)
chr1 (97-177)||(8670174-8670254)
chr1 (824-949)||(42559362-42559481)
chr1 (94-177)||(12708198-12708281)
chr1 (94-177)||(12717743-12717826)
chr1 (418-583)||(42558040-42558206)
chr1 (97-176)||(51848985-51849064)
chr1 (233-280)||(52233248-52233295)
chr1 (127-177)||(21728153-21728203)
chr1 (233-283)||(29632428-29632478)
chr1 (103-177)||(44671931-44672005)
chr1 (233-278)||(18541078-18541123)
chr1 (233-281)||(12708086-12708134)
chr1 (233-281)||(12713540-12713588)
chr1 (233-281)||(12717631-12717679)
chr1 (233-277)||(30505363-30505407)
chr1 (233-281)||(32811894-32811942)
chr1 (239-278)||(1689390-1689429)
chr1 (233-280)||(49596232-49596279)
chr1 (127-173)||(43196008-43196054)
chr1 (358-404)||(43868637-43868683)
chr1 (233-278)||(8905727-8905772)
chr1 (96-177)||(18540943-18541024)
chr1 (233-282)||(18610768-18610817)
chr1 (233-274)||(20268540-20268581)
chr1 (233-278)||(27810274-27810319)
chr1 (233-278)||(36690599-36690644)
chr1 (233-278)||(36706700-36706745)
chr1 (233-278)||(39669805-39669850)
chr1 (239-279)||(740989-741029)
chr1 (233-277)||(3606121-3606165)
chr1 (97-177)||(8464402-8464482)
chr1 (97-173)||(15182472-15182548)
chr1 (239-279)||(30973550-30973590)
chr1 (97-177)||(42615959-42616039)
chr1 (239-283)||(46281430-46281474)
chr1 (233-277)||(50141962-50142006)
chr1 (240-280)||(50242321-50242361)
chr1 (233-281)||(51848876-51848924)
chr1 (97-173)||(52417637-52417713)
chr1 (233-276)||(1788371-1788414)
chr1 (233-280)||(8934623-8934670)
chr1 (239-278)||(12999855-12999894)
chr1 (239-282)||(16263420-16263463)
chr1 (127-177)||(950364-950414)
chr1 (239-277)||(7648250-7648288)
chr1 (239-277)||(12306167-12306205)
chr1 (233-279)||(16987445-16987491)
chr1 (239-277)||(33076119-33076157)
chr1 (239-281)||(35848408-35848450)
chr1 (239-273)||(36230200-36230234)
chr1 (233-279)||(43755705-43755751)
chr1 (233-279)||(44112452-44112498)
chr1 (233-279)||(44672057-44672103)
chr1 (135-172)||(3606023-3606060)
chr1 (250-283)||(22951769-22951802)
chr1 (251-280)||(23044916-23044945)
chr1 (233-278)||(25989011-25989056)
chr1 (251-288)||(29706748-29706785)
chr1 (233-278)||(30439249-30439294)
chr1 (233-278)||(31436819-31436864)
chr1 (96-173)||(34002208-34002285)
chr1 (247-280)||(36750524-36750557)
chr1 (233-278)||(44641930-44641975)
chr1 (240-281)||(48325801-48325842)
chr1 (233-278)||(50017450-50017495)
chr1 (233-278)||(51193158-51193203)
[»] chr5 (56 HSPs)
chr5 (393-789)||(25509569-25509967)
chr5 (802-968)||(24497338-24497502)
chr5 (824-968)||(15457892-15458034)
chr5 (618-763)||(24497597-24497741)
chr5 (828-968)||(25510047-25510184)
chr5 (95-175)||(36415949-36416029)
chr5 (98-177)||(15290911-15290990)
chr5 (824-949)||(27076334-27076455)
chr5 (103-174)||(2325881-2325952)
chr5 (97-176)||(285329-285408)
chr5 (98-177)||(21023400-21023479)
chr5 (98-177)||(32425054-32425133)
chr5 (418-595)||(24497899-24498075)
chr5 (233-277)||(6529019-6529063)
chr5 (97-177)||(25038182-25038262)
chr5 (628-788)||(27076684-27076843)
chr5 (233-277)||(36416089-36416133)
chr5 (233-280)||(5996664-5996711)
chr5 (345-424)||(15459224-15459303)
chr5 (239-283)||(6758824-6758868)
chr5 (751-794)||(15457777-15457820)
chr5 (233-280)||(38500940-38500987)
chr5 (127-177)||(7077258-7077308)
chr5 (233-278)||(2050926-2050971)
chr5 (233-278)||(2456025-2456070)
chr5 (696-785)||(19998046-19998135)
chr5 (233-278)||(41192586-41192631)
chr5 (233-288)||(6538858-6538914)
chr5 (233-277)||(15529832-15529876)
chr5 (233-277)||(31708370-31708414)
chr5 (233-277)||(32873176-32873220)
chr5 (233-281)||(33393630-33393678)
chr5 (233-281)||(34428156-34428204)
chr5 (238-281)||(4434478-4434521)
chr5 (239-282)||(13547267-13547310)
chr5 (233-276)||(24463258-24463301)
chr5 (239-282)||(29687076-29687119)
chr5 (233-280)||(36572688-36572735)
chr5 (509-583)||(43316944-43317019)
chr5 (233-275)||(285229-285271)
chr5 (251-285)||(12891141-12891175)
chr5 (251-281)||(19844354-19844384)
chr5 (239-277)||(22098255-22098293)
chr5 (233-279)||(22647588-22647634)
chr5 (460-569)||(27350391-27350501)
chr5 (251-281)||(38919859-38919889)
chr5 (233-283)||(42909713-42909763)
chr5 (236-281)||(125088-125133)
chr5 (96-173)||(3722964-3723041)
chr5 (233-278)||(3723103-3723148)
chr5 (233-278)||(11881014-11881059)
chr5 (897-949)||(19997660-19997712)
chr5 (251-280)||(29803222-29803251)
chr5 (233-278)||(29807029-29807074)
chr5 (251-280)||(35165676-35165705)
chr5 (140-173)||(41192693-41192726)
[»] scaffold0129 (1 HSPs)
scaffold0129 (347-836)||(5655-6138)
[»] chr8 (69 HSPs)
chr8 (345-605)||(38884655-38884919)
chr8 (800-966)||(10268896-10269059)
chr8 (346-834)||(44527763-44528253)
chr8 (800-962)||(11031975-11032134)
chr8 (618-763)||(11031831-11031975)
chr8 (422-595)||(11031516-11031691)
chr8 (433-834)||(37803254-37803654)
chr8 (622-740)||(9186178-9186295)
chr8 (715-796)||(38884507-38884588)
chr8 (802-920)||(38884349-38884467)
chr8 (97-177)||(39153573-39153653)
chr8 (97-177)||(40719533-40719613)
chr8 (96-177)||(9550311-9550392)
chr8 (420-583)||(9186487-9186651)
chr8 (413-595)||(10269361-10269544)
chr8 (618-763)||(10269059-10269203)
chr8 (97-177)||(31806401-31806481)
chr8 (618-720)||(12515502-12515603)
chr8 (418-583)||(12515167-12515323)
chr8 (623-705)||(12516106-12516187)
chr8 (95-176)||(30608597-30608678)
chr8 (96-177)||(35819039-35819120)
chr8 (666-789)||(10771196-10771317)
chr8 (233-277)||(31806299-31806343)
chr8 (236-276)||(34494668-34494708)
chr8 (233-279)||(35818935-35818981)
chr8 (97-177)||(10344430-10344511)
chr8 (97-177)||(9048205-9048285)
chr8 (233-281)||(9738720-9738768)
chr8 (97-177)||(16808683-16808763)
chr8 (824-968)||(17807959-17808098)
chr8 (233-277)||(20473779-20473823)
chr8 (97-177)||(34996249-34996329)
chr8 (233-277)||(39153709-39153753)
chr8 (832-968)||(38882318-38882450)
chr8 (233-280)||(40719670-40719717)
chr8 (239-281)||(67194-67236)
chr8 (233-279)||(12959936-12959982)
chr8 (233-278)||(1332495-1332540)
chr8 (233-278)||(3988904-3988949)
chr8 (233-278)||(9048343-9048388)
chr8 (240-285)||(36023076-36023121)
chr8 (238-279)||(41639820-41639861)
chr8 (481-569)||(44620525-44620614)
chr8 (233-281)||(6004940-6004988)
chr8 (233-281)||(9431312-9431360)
chr8 (233-277)||(10553110-10553154)
chr8 (239-279)||(11584094-11584134)
chr8 (233-277)||(22767132-22767176)
chr8 (233-281)||(27630893-27630941)
chr8 (97-177)||(34494527-34494607)
chr8 (97-173)||(40413252-40413328)
chr8 (233-277)||(40608513-40608557)
chr8 (233-277)||(43873718-43873762)
chr8 (749-836)||(15143360-15143446)
chr8 (618-785)||(24285535-24285701)
chr8 (238-277)||(38288240-38288279)
chr8 (236-282)||(3950105-3950151)
chr8 (233-279)||(16808579-16808625)
chr8 (239-277)||(25830279-25830317)
chr8 (233-279)||(34996387-34996433)
chr8 (233-279)||(36497659-36497705)
chr8 (239-277)||(42786693-42786731)
chr8 (233-279)||(43715873-43715919)
chr8 (233-278)||(9550434-9550479)
chr8 (347-404)||(15142972-15143028)
chr8 (233-278)||(38504169-38504214)
chr8 (233-282)||(44711973-44712022)
chr8 (233-282)||(45101391-45101440)
[»] chr6 (46 HSPs)
chr6 (346-602)||(25170308-25170565)
chr6 (666-808)||(25170575-25170718)
chr6 (418-583)||(31210282-31210448)
chr6 (618-763)||(31209974-31210118)
chr6 (433-834)||(11164945-11165348)
chr6 (628-739)||(17935278-17935388)
chr6 (97-177)||(27102201-27102282)
chr6 (97-177)||(27144023-27144104)
chr6 (97-177)||(26391172-26391252)
chr6 (114-175)||(8778778-8778839)
chr6 (97-177)||(15098840-15098920)
chr6 (233-277)||(27102115-27102159)
chr6 (233-277)||(27143937-27143981)
chr6 (233-289)||(34490335-34490391)
chr6 (233-280)||(11785352-11785399)
chr6 (666-789)||(24431598-24431720)
chr6 (896-967)||(31209777-31209846)
chr6 (233-279)||(8778899-8778945)
chr6 (239-280)||(9083094-9083135)
chr6 (233-289)||(11743009-11743065)
chr6 (233-277)||(17835612-17835656)
chr6 (97-177)||(19788965-19789045)
chr6 (251-287)||(27334848-27334884)
chr6 (251-287)||(27395588-27395624)
chr6 (233-277)||(28647462-28647506)
chr6 (900-968)||(29114070-29114136)
chr6 (239-282)||(32729884-32729927)
chr6 (233-279)||(3821376-3821422)
chr6 (127-177)||(4923048-4923098)
chr6 (233-279)||(9188971-9189017)
chr6 (233-279)||(15666800-15666846)
chr6 (233-279)||(19789103-19789149)
chr6 (237-279)||(26391316-26391358)
chr6 (127-177)||(27334966-27335016)
chr6 (127-177)||(27395706-27395756)
chr6 (127-173)||(28965759-28965805)
chr6 (233-279)||(28965867-28965913)
chr6 (233-279)||(29383555-29383601)
chr6 (233-275)||(29643444-29643486)
chr6 (803-869)||(31209848-31209914)
chr6 (241-279)||(33656696-33656734)
chr6 (509-581)||(17950725-17950798)
chr6 (233-278)||(20712066-20712110)
chr6 (239-280)||(25127866-25127907)
chr6 (233-278)||(30622023-30622068)
chr6 (140-173)||(34413197-34413230)
[»] scaffold0092 (2 HSPs)
scaffold0092 (433-814)||(34697-35081)
scaffold0092 (896-953)||(35219-35275)
[»] scaffold0204 (2 HSPs)
scaffold0204 (433-836)||(28439-28844)
scaffold0204 (233-282)||(27334-27383)
[»] scaffold0024 (3 HSPs)
scaffold0024 (101-175)||(92052-92126)
scaffold0024 (233-279)||(60467-60513)
scaffold0024 (233-279)||(91946-91992)
[»] scaffold0087 (2 HSPs)
scaffold0087 (97-173)||(26951-27027)
scaffold0087 (233-279)||(27090-27136)
[»] scaffold0001 (1 HSPs)
scaffold0001 (99-175)||(404852-404928)
[»] scaffold0036 (1 HSPs)
scaffold0036 (97-173)||(18110-18185)
[»] scaffold0014 (1 HSPs)
scaffold0014 (233-281)||(199262-199310)
[»] scaffold0006 (2 HSPs)
scaffold0006 (482-569)||(38135-38223)
scaffold0006 (233-280)||(278467-278514)
[»] scaffold0018 (1 HSPs)
scaffold0018 (233-280)||(35999-36046)
[»] scaffold0016 (1 HSPs)
scaffold0016 (239-281)||(204478-204520)
[»] scaffold2089 (1 HSPs)
scaffold2089 (239-280)||(526-567)
[»] scaffold0522 (1 HSPs)
scaffold0522 (144-177)||(2440-2473)
[»] scaffold0504 (1 HSPs)
scaffold0504 (233-278)||(10762-10807)
[»] scaffold0154 (1 HSPs)
scaffold0154 (233-278)||(9875-9920)
[»] scaffold0032 (1 HSPs)
scaffold0032 (233-278)||(17435-17480)


Alignment Details
Target: chr4 (Bit Score: 576; Significance: 0; HSPs: 104)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 576; E-Value: 0
Query Start/End: Original strand, 278 - 968
Target Start/End: Original strand, 9590244 - 9590932
Alignment:
Q  278 ttttttaatttaacgcgtctattcttgctcgtagatgaattttaagctatcggtaacgaatgaacaatcaaattcgttcttgaatttgcacgaatcggac 377  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9590244 ttttttaatttaacgcgtctattctcgctcgcagatgaattttaagctatcgctaacgaatgaacaatcaaattcgttcttgaatttgcacgaatcggac 9590343  T
Q  378 aaaaatatcctctaatttatcgaaatggctattttgtttatgaatttgtcatatatcaatcaaattagtccctccgttcatttggggtgttaacgacgat 477  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9590344 aaaaatatcctccaatttatcgaaatggctattttgtttatgaatttgtcatatatcaatcaaattagtccctccgttcatttggggtgttaacgacgat 9590443  T
Q  478 aatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataacagggactaatttggccgatggcaaccaaaattttcaaggacgaaattga 577  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9590444 gatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataacagggactaatttggccgatggtaaccaaaattttcaaggacgaaattga 9590543  T
Q  578 ttgattgcataaaatgttatgcaatttaatctctgttatgtttgactaactatcaaagcgatccctaaattatatt-aaaaaacccacgaaataagtctt 676  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||| |||||| |||| ||||||||| |    
T  9590544 ttgattgcagaaaatgttatgcaatttaatctctgttatatttgactaagtatcaaagcgatccctacattatattaaaaaaatccaccaaataagtcct 9590643  T
Q  677 tgaattatataaacatatatcaatttgattctttaagcatatatgtgcagaacaaagtaaaaaagtcagaaaacgcaactttatccttgaaaataccatc 776  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9590644 tgaattatataaacatatatcaatttgattctttaagtatatatgtgcagaacaaagtaaaaaagtcagaaaacgcaacttcatccttgaaaataccatc 9590743  T
Q  777 aaataagtcataagtcttaactatgaaatattgcatagggcaaaaacaacccaactatggagcctaattcaaacaagtctgaatattacattttcaaaag 876  Q
    |||||||||||||||||||| | ||||||||||||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9590744 aaataagtcataagtcttaagtctgaaatattgcata-agcaaaagcaacccaactatgaagcctaattcaaacaagtctgaatattacattttcaaaag 9590842  T
Q  877 catattttaaatacgttttcatcaagcatcacttctttgaaaatctgggggttggggataaactccatgaatttaggattgagtcgaaccgg 968  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  9590843 catattttaaatacgttttcatcaagcatcacttctttggaaatctgggggtt-gggataaactccatgaattta-gattgagtcgaaccgg 9590932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 358 - 832
Target Start/End: Complemental strand, 44974167 - 44973695
Alignment:
Q  358 tgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatggctattttgtttatgaatttgtcatatatcaatcaaattagtccctccgttca 457  Q
    |||||||||| ||||||||||||||  ||||| |||||||||||||    | |||||   || ||||||||||| |||||||||||||||||| ||| ||    
T  44974167 tgaatttgcaggaatcggacaaaaacgtcctccaatttatcgaaatacacactttgtccctgcatttgtcatatctcaatcaaattagtccctacgtcca 44974068  T
Q  458 tttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataa-cagggactaatttggccgatggcaaccaa 556  Q
    ||||||| |||||||  ||| | ||||||||||||  |||||||| |||||||||||||||||||||||| |||||||||| ||||| ||| |  || ||    
T  44974067 tttggggcgttaacggagatgacgtggccgttaac--ctcacatgggttgtcatgtcagatgccacataagcagggactaaattggctgatagtgacaaa 44973970  T
Q  557 aattttcaaggacgaaattgattgattgcataaaatgttatgcaatttaatctctgttatgtttgactaactatcaaagcgatccctaaattatattaaa 656  Q
    ||||  |||||| ||||||||||||  ||| |||||||| ||||||||  ||  ||||   ||| ||| ||||||||| |||||| ||||||||||||||    
T  44973969 aattaccaaggatgaaattgattgaccgcaaaaaatgttgtgcaattttgtccatgttgctttttacttactatcaaatcgatccttaaattatattaaa 44973870  T
Q  657 aaacccacgaaataagtctttgaattatataaacatatatc-aatttgattctttaagcatatatgtgcagaacaaagtaaaaaagtcagaaaacgcaac 755  Q
    || ||  | ||||||||| ||||||| |||||||||||||| |||||||| ||| |||||||||| |||| |||| ||| |||||| || || |  ||||    
T  44973869 aatccatc-aaataagtccttgaattttataaacatatatccaatttgatccttgaagcatatatttgcaaaacagagtgaaaaagacataacatacaac 44973771  T
Q  756 tttatccttgaaaataccatcaaataagtcataagtcttaactatgaaatattgcatagggcaaaaacaacccaact 832  Q
    || ||| ||||||||||||| |||||||||||||||||||| | ||||||||| |||| ||||||| ||||| ||||    
T  44973770 ttcatcattgaaaataccattaaataagtcataagtcttaagtttgaaatattacata-ggcaaaatcaaccaaact 44973695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 428 - 796
Target Start/End: Complemental strand, 50133101 - 50132734
Alignment:
Q  428 atatatcaatcaaattagtccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataa 527  Q
    |||| |||||||||||||||||| ||| ||||||||| |||||||  ||| | ||| |||||||| ||||||||| ||||  | ||||||||||||||||    
T  50133101 atatctcaatcaaattagtcccttcgtccatttggggcgttaacggtgatgacgtgaccgttaacctctcacatgggttgctaagtcagatgccacataa 50133002  T
Q  528 -cagggactaatttggccgatggcaaccaaaattttcaaggacgaaattgattgattgcataaaatgttatgcaatttaatctctgttatgtttgactaa 626  Q
     |||||||||| ||||  ||| |  || |||| ||||||||||||||||||||||||||| |||||||| ||||||||   |  |||||  |||   | |    
T  50133001 gcagggactaaattggttgatagtgacaaaaaatttcaaggacgaaattgattgattgcaaaaaatgttgtgcaattttgcccatgttacttttt--tta 50132904  T
Q  627 ctatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatc-aatttgattctttaagcatatatgtgca 725  Q
    ||  ||||  ||||| |||||||||||||||| ||  | ||||||||||||||||| |||||||||||||| |||||||| ||| |||||||||| ||||    
T  50132903 cttccaaattgatccttaaattatattaaaaacccgtc-aaataagtctttgaattttataaacatatatccaatttgatccttgaagcatatatttgca 50132805  T
Q  726 gaacaaagtaaaaaagtcagaaaacgcaactttatccttgaaaataccatcaaataagtcataagtcttaa 796  Q
     |||| ||| |||||| ||||| || |||||| ||||||||||||||||| ||||||||||||| ||||||    
T  50132804 aaacatagtgaaaaagacagaagacacaacttcatccttgaaaataccattaaataagtcataattcttaa 50132734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 434 - 685
Target Start/End: Complemental strand, 27383966 - 27383714
Alignment:
Q  434 caatcaaattagtccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataa-caggg 532  Q
    ||||||||||||||||| ||| |||||| ||||||||||  ||| | |||| ||||||| | ||| |||  ||| ||||||||||||||||||| ||  |    
T  27383966 caatcaaattagtccctacgtccatttgaggtgttaacggtgatgacgtggtcgttaacctatcagatggattgccatgtcagatgccacataagcaatg 27383867  T
Q  533 actaatttggccgatggcaaccaaaattttcaaggacgaaattgattgattgcataaaatgttatgcaatttaatctctgttatgtttgactaactatca 632  Q
    | ||| ||||| ||| |  || ||||||| ||| ||||||||||||||||| || ||||| ||||||||| || || ||||||  ||| ||| |||||||    
T  27383866 aataaattggctgatagtgacaaaaatttccaaagacgaaattgattgatttcaaaaaatattatgcaatatagtccctgttaatttttacttactatca 27383767  T
Q  633 aagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattata 685  Q
    || |||||||||||||||||||||||| ||   ||||||||| ||||||||||    
T  27383766 aatcgatccctaaattatattaaaaaaaccgtcaaataagtccttgaattata 27383714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 618 - 836
Target Start/End: Complemental strand, 39294549 - 39294325
Alignment:
Q  618 tttgactaactatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaatttgattctttaagcata 717  Q
    ||||| |||||||||||  |||||||| ||||||||||||| ||||  ||||||||| ||||||||| |||  | ||||||||||||| ||| |||||||    
T  39294549 tttgaataactatcaaattgatccctacattatattaaaaa-cccatcaaataagtcattgaattatttaattaaatatcaatttgatccttgaagcata 39294451  T
Q  718 tatgtgcagaacaaagtaaaaaagtcagaaaacgcaactttatccttgaaaataccat---caa-----ataagtcataagtcttaactatgaaatattg 809  Q
    |||||||| ||||  ||||||| ||||||| || |||||| |||||  || ||  |||   |||     |||||||||||||||||| | |||||||||     
T  39294450 tatgtgcataacattgtaaaaatgtcagaagacacaacttgatcctaaaatattacataggcaaaagtcataagtcataagtcttaagtctgaaatatta 39294351  T
Q  810 catagggcaaaaacaacccaactatgg 836  Q
    |||| ||||||||||||||||||||||    
T  39294350 cata-ggcaaaaacaacccaactatgg 39294325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 618 - 764
Target Start/End: Original strand, 230872 - 231017
Alignment:
Q  618 tttgactaactatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaatttgattctttaagcata 717  Q
    ||||||||||||||||| | |||  || ||||||||||||| ||||  ||||||||| ||||||||| ||| || ||||||||||||| ||  |||||||    
T  230872 tttgactaactatcaaatcaatcattacattatattaaaaa-cccatcaaataagtcattgaattatttaatcagatatcaatttgatcctcgaagcata 230970  T
Q  718 tatgtgcagaacaaagtaaaaaagtcagaaaacgcaactttatcctt 764  Q
    |||||||| |||||  ||||||| |||||| || |||||| ||||||    
T  230971 tatgtgcaaaacaatataaaaaattcagaagacacaacttgatcctt 231017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 9567845 - 9567760
Alignment:
Q  7 aacttaatcaccaagtttcaatcacatgggttgtccccctacac------tgcacatgttttatctactctaacttgcactacaag 86  Q
    ||||||||||||||||||||| ||||||||||||||||||||||      |||||||||||||||||||||||||||| |||||||    
T  9567845 aacttaatcaccaagtttcaagcacatgggttgtccccctacactattcttgcacatgttttatctactctaacttgccctacaag 9567760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 53356966 - 53357046
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||||||| ||||||||| | |||||| ||||| |||||||||| |||||| ||||||||||||||||||||    
T  53356966 gagtagtgatatatgtacaactctttggtacaacttctatgacaactttgattgtctctcatttgattggtcaaaaataat 53357046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 51540737 - 51540816
Alignment:
Q  98 agtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||| || ||||||||| | |||||||||||| || |||| ||||||||||||||||||||||||||||||    
T  51540737 agtagtgatatatatacaactctttggtacaacttttatgacaattttggttttctctcttttgattggtcaaaaataat 51540816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 39880921 - 39880999
Alignment:
Q  99 gtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||||| ||||||||  | ||||||| |||| ||||||| ||||||||||||||||||||||||||||||    
T  39880921 gtagtgatatatgtacaactctttcgtacaactttcatgacaactttggttttctctcttttgattggtcaaaaataat 39880999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 4489688 - 4489768
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||||||| ||||||||| | ||||||| |||| |||||| ||||||| ||||||| |||||||||||||||    
T  4489688 gagtagtgatatatgtacaactctttggtacaactttcatgacaactttaattttctatcttttggttggtcaaaaataat 4489768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 510 - 595
Target Start/End: Complemental strand, 6999227 - 6999141
Alignment:
Q  510 atgtcagatgccacataacagggactaatttggccgatggcaaccaaaattttcaaggacgaaattgattgatt-gcataaaatgtt 595  Q
    |||| |||||||||||||   |||||||||||||| || |  |||||||||||||||||||||||||||||||| ||||||||||||    
T  6999227 atgttagatgccacataagcaggactaatttggccaatagtgaccaaaattttcaaggacgaaattgattgattcgcataaaatgtt 6999141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 618 - 720
Target Start/End: Original strand, 13438278 - 13438379
Alignment:
Q  618 tttgactaactatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaatttgattctttaagcata 717  Q
    ||||||||||||||||| |||||| || ||||||||||||| ||||  ||||||||| ||||||||| ||| || ||||||||||||| ||| || ||||    
T  13438278 tttgactaactatcaaatcgatccttacattatattaaaaa-cccataaaataagtccttgaattatttaatcagatatcaatttgatccttgaaacata 13438376  T
Q  718 tat 720  Q
    |||    
T  13438377 tat 13438379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 418 - 569
Target Start/End: Original strand, 230519 - 230671
Alignment:
Q  418 tgaatttgtcatatatcaatcaaattagtccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcaga 517  Q
    |||||||| ||||| || ||||| |||||||||| ||||| || |||||||||||  | | | |||||||||||| ||||||||| ||   |||||||||    
T  230519 tgaatttggcatatgtcgatcaatttagtccctctgttcaatttgggtgttaacggtgctgacgtggccgttaacctctcacatgggtctccatgtcaga 230618  T
Q  518 tgccacataa-cagggactaatttggccgatggcaaccaaaattttcaaggac 569  Q
    ||||||| || |||||| ||||||||| ||| |  |||| ||||| |||||||    
T  230619 tgccacacaagcagggattaatttggctgatagtgaccataatttccaaggac 230671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 9590158 - 9590233
Alignment:
Q  7 aacttaatcaccaagtttcaatcacatgggttgtccccctacac------tgcacatgttttatctactctaactt 76  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||      ||||||||||||||||||||||||||    
T  9590158 aacttaatcaccaagcttcaagcacatgggttgtccccctacactattcatgcacatgttttatctactctaactt 9590233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 29406926 - 29407006
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||||||| ||||||||| | ||||||| |||| || |||| |||||||| ||||||||||| |||||||||    
T  29406926 gagtagtgatatatgtacaactctttggtacaactttcatgacaattttggttttctctattttgattggtaaaaaataat 29407006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 33820363 - 33820411
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33820363 ttgtcaaaaagttgttagaaaatagttgtacaaatatcatttctctttt 33820411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 12241102 - 12241056
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  12241102 ttgtcaaaaagttgttagaaaatagttgtacaaatatcatttctctt 12241056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 9472540 - 9472585
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  9472540 ttgtcaaaaaattattagaaaatagttgtacaaatatcatttctct 9472585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 17805635 - 17805554
Alignment:
Q  96 tgagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||| |||| || |||||| | ||| ||||||||||| |||| |||| ||||||||||||| |||||||||||    
T  17805635 tgagtagtgatatgtgtacaattctttggtacaatttttatgataattttggttttttctcttttgattgatcaaaaataat 17805554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 9567580 - 9567532
Alignment:
Q  279 tttttaatttaacgcgtctattcttgctcgtagatgaattttaagctat 327  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  9567580 tttttaatttaacgcgtctattctcgctcgcagatgaattttaagctat 9567532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 30890178 - 30890254
Alignment:
Q  101 agtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||| ||||||||| | ||| |||||||| ||||||| |||||||| |||||| ||||||| ||||||    
T  30890178 agtgatatatgtacaactctttggtacaatttttatgacaactttggttttctctattttgactggtcaagaataat 30890254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 666 - 834
Target Start/End: Original strand, 37478224 - 37478394
Alignment:
Q  666 aaataagtctttgaattatataaacatatatc-aatttgattctttaagcatatatgtgcag--aacaaagtaaaaaagtcagaaaacgcaactttatcc 762  Q
    ||||||||| ||||||||||||||||||| || || ||||| ||| | |||||||| |||||  |||  | |||||| | || || |  |||||||||||    
T  37478224 aaataagtccttgaattatataaacatatttccaagttgatccttgatgcatatatttgcagcaaacgtattaaaaatgacaaaacatacaactttatcc 37478323  T
Q  763 ttgaaaataccatcaaataagtcataagtcttaactatgaaatattgcatagggcaaaaacaacccaactat 834  Q
    || |||||| ||| ||||||||||||  |||||| | ||||||||| |||| ||||||| |||| |||||||    
T  37478324 tttaaaatatcattaaataagtcatatctcttaagtttgaaatattacata-ggcaaaagcaactcaactat 37478394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 53357104 - 53357148
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  53357104 ttgtcaaaaaattgttagaaaatagttatacaaatatcatttctc 53357148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 1562563 - 1562610
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  1562563 ttgtcaaaaagttgttagaaaatggttgtacaaatatcatttctcttt 1562610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 618 - 720
Target Start/End: Complemental strand, 13449981 - 13449880
Alignment:
Q  618 tttgactaactatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaatttgattctttaagcata 717  Q
    ||||||||||||||||| |||||| || | ||||||||||| ||||  ||||||||  ||||||||| ||| || ||||||||||||| ||| || ||||    
T  13449981 tttgactaactatcaaatcgatccttacaatatattaaaaa-cccataaaataagttcttgaattatttaatcagatatcaatttgatccttgaaacata 13449883  T
Q  718 tat 720  Q
    |||    
T  13449882 tat 13449880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 40755962 - 40755920
Alignment:
Q  236 tcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  40755962 tcaaaaaattgttagaaaatggttgtacaaatatcatttctct 40755920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 177
Target Start/End: Complemental strand, 55996604 - 55996522
Alignment:
Q  95 atgagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||||||||| |||| |||| | ||| | | |||| |||||  ||||||| |||||||||||||||||||||||    
T  55996604 atgagtagtgatatatgtacaactttttggtacaattataatgacaacttcaattttctatcttttgattggtcaaaaataat 55996522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 149314 - 149358
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||||||||||||||||| | |||||||||||||||||||||    
T  149314 ttgtcaaaaaattgttagaaattggttgtacaaatatcatttctc 149358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 3968929 - 3968885
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||||||||| |||||||||||| |||||||||||||||||||||    
T  3968929 ttgtcaaaaagttgttagaaaatggttgtacaaatatcatttctc 3968885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 4489825 - 4489869
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||    
T  4489825 ttgtcaaaaaattgttagaaaatggttatacaaatatcatttctc 4489869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 12241239 - 12241160
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    |||||||||||| |||| ||||||||  | |||| ||||||| ||||||  |||||||||||||||||||| |||||||||    
T  12241239 gagtagtgatatttgtacaactcttttgtacaacctttatgacaactttatttttctctcttttgattggt-aaaaataat 12241160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 25523225 - 25523269
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||||||||| |||| |||||||||||||||||||||||||||||    
T  25523225 ttgtcaaaaagttgtgagaaaatagttgtacaaatatcatttctc 25523269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 896 - 968
Target Start/End: Complemental strand, 27383214 - 27383144
Alignment:
Q  896 catcaagcatcacttctttgaaaatctgggggttggggataaactccatgaatttaggattgagtcgaaccgg 968  Q
    ||||||| |||| ||||||||||||| ||||||| ||||||||||||||||| ||||| |||||| |||||||    
T  27383214 catcaagtatcagttctttgaaaatccgggggtt-gggataaactccatgaacttagg-ttgagttgaaccgg 27383144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 752 - 836
Target Start/End: Complemental strand, 27383419 - 27383336
Alignment:
Q  752 caactttatccttgaaaataccatcaaataagtcataagtcttaactatgaaatattgcatagggcaaaaacaacccaactatgg 836  Q
    |||||| || |||||||||||||| |||||||||||| ||||||| | ||||||||| |||| | ||||| ||||| ||||||||    
T  27383419 caacttcatgcttgaaaataccattaaataagtcatatgtcttaagtttgaaatattacata-gacaaaagcaaccaaactatgg 27383336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 43759069 - 43759149
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    |||||||||||| |||| ||||||||  | |||| ||||||| ||| ||| |||||| |||||||||| ||||||||||||    
T  43759069 gagtagtgatatttgtacaactcttttgtacaacctttatgacaaccttgtttttctatcttttgatttgtcaaaaataat 43759149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 46844268 - 46844316
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    ||||||||||||||||| |||||||||||||| ||||||||||| ||||    
T  46844268 ttgtcaaaaaattgttacaaaatagttgtacagatatcatttctatttt 46844316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 279
Target Start/End: Original strand, 53662461 - 53662501
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  53662461 aaaaattgttacaaaatagttgtacaaatatcatttctctt 53662501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 55996466 - 55996422
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  55996466 ttgtcaaaaaattgttagaaaatgattgtacaaatatcatttctc 55996422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 47288120 - 47288077
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctcttttt 282  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||    
T  47288120 aaaaattgttacaaaatggttgtacaaatatcatttctcttttt 47288077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 55595993 - 55595946
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    |||||||||| |||||||||| | ||||||||||||||||||||||||    
T  55595993 ttgtcaaaaagttgttagaaattggttgtacaaatatcatttctcttt 55595946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 6290506 - 6290460
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    ||||||| || |||||| |||||||||||||||||||||||||||||    
T  6290506 ttgtcaagaagttgttacaaaatagttgtacaaatatcatttctctt 6290460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 636 - 742
Target Start/End: Complemental strand, 7150323 - 7150218
Alignment:
Q  636 cgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaatttgattctttaagcatatatgtgcagaacaaagta 735  Q
    ||||||||| ||||||| |||| |||  | ||||||||| || |||||| |||||| || ||||| |||| |||   ||||||||||| |||||||||||    
T  7150323 cgatccctacattatataaaaataccatc-aaataagtcctttaattatttaaacagatgtcaatgtgatccttggcgcatatatgtgtagaacaaagta 7150225  T
Q  736 aaaaagt 742  Q
    |||||||    
T  7150224 aaaaagt 7150218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 52891877 - 52891923
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    |||||||||| || |||||||||||||||||| ||||||||||||||    
T  52891877 ttgtcaaaaagttcttagaaaatagttgtacacatatcatttctctt 52891923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 54165188 - 54165238
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttttt 283  Q
    |||||||||||||||   ||||| |||||||||||||||||||||||||||    
T  54165188 ttgtcaaaaaattgtagtaaaatggttgtacaaatatcatttctctttttt 54165238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 173
Target Start/End: Complemental strand, 56025408 - 56025362
Alignment:
Q  127 caacttttatgataactttgattttctctcttttgattggtcaaaaa 173  Q
    |||||||  ||| ||||||||||||||||||||||||||||||||||    
T  56025408 caactttggtgacaactttgattttctctcttttgattggtcaaaaa 56025362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 12074178 - 12074223
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||||||||||||| | ||||| ||||||||||||||||||||||    
T  12074178 ttgtcaaaaaattgtcataaaatggttgtacaaatatcatttctct 12074223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 12638869 - 12638824
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||| ||||||||||| ||| ||||||||||||||||||||||||    
T  12638869 ttgtctaaaaattgttacaaagtagttgtacaaatatcatttctct 12638824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 22920190 - 22920235
Alignment:
Q  127 caacttttatgataactttgattttctctcttttgattggtcaaaa 172  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||||    
T  22920190 caacttttatgacaactttgtttttctctattttgattggtcaaaa 22920235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 22971609 - 22971564
Alignment:
Q  127 caacttttatgataactttgattttctctcttttgattggtcaaaa 172  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||||    
T  22971609 caacttttatgacaactttgtttttctctattttgattggtcaaaa 22971564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 40756104 - 40756023
Alignment:
Q  96 tgagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||| || | |||| |||| | ||||| ||  || ||||||||||||||||  ||||||||||||||||||||    
T  40756104 tgagtagtgatatttgaacaactttttggtacaactctttggacaactttgattttctcttctttgattggtcaaaaataat 40756023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 42815442 - 42815401
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    |||| |||||| ||||||||||||||||||||||||||||||    
T  42815442 aaaagttgttacaaaatagttgtacaaatatcatttctcttt 42815401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 43759178 - 43759219
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcattt 274  Q
    ||||||||||||||||||||||| ||||||||||||| ||||    
T  43759178 ttgtcaaaaaattgttagaaaatggttgtacaaatattattt 43759219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 46364006 - 46364047
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcattt 274  Q
    ||||||||||||||||||||||| |||||||| |||||||||    
T  46364006 ttgtcaaaaaattgttagaaaatggttgtacagatatcattt 46364047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 47998638 - 47998593
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    |||||||||| |||||| ||||| ||||||||||||||||||||||    
T  47998638 ttgtcaaaaagttgttacaaaatggttgtacaaatatcatttctct 47998593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 282
Target Start/End: Original strand, 49424847 - 49424896
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttttt 282  Q
    |||||||||| |||||| ||||  ||||||||||||||||||||||||||    
T  49424847 ttgtcaaaaagttgttacaaaaaggttgtacaaatatcatttctcttttt 49424896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 282
Target Start/End: Original strand, 53583155 - 53583204
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttttt 282  Q
    |||||||||| |||| ||||| | ||||||||||||||||||||||||||    
T  53583155 ttgtcaaaaagttgtgagaaagtggttgtacaaatatcatttctcttttt 53583204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 279
Target Start/End: Original strand, 940292 - 940332
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    ||||||||| | |||||||||||||||||||||||||||||    
T  940292 aaaaattgtcacaaaatagttgtacaaatatcatttctctt 940332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 25725721 - 25725765
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||||||||| |||||||||| | |||||||||||||||||||||    
T  25725721 ttgtcaaaaagttgttagaaagtggttgtacaaatatcatttctc 25725765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 531 - 583
Target Start/End: Complemental strand, 25995016 - 25994964
Alignment:
Q  531 ggactaatttggccgatggcaaccaaaattttcaaggacgaaattgattgatt 583  Q
    |||||||||||||||||    |||||||||||||||||||||||||| |||||    
T  25995016 ggactaatttggccgataatgaccaaaattttcaaggacgaaattgactgatt 25994964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 39881057 - 39881101
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||    
T  39881057 ttgtcaaaaagttgttagaaaatgattgtacaaatatcatttctc 39881101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 43358657 - 43358609
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    ||||| |||| |||||||||| | |||||||||||||||||||||||||    
T  43358657 ttgtccaaaagttgttagaaattggttgtacaaatatcatttctctttt 43358609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 45274445 - 45274365
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    |||| |||||||||||| |||| ||||   ||||||| |||| |||| | |||||||||||||| ||||||| ||||||||    
T  45274445 gagtggtgatatatgtacaactatttgggacaactttgatgacaactctcattttctctcttttcattggtccaaaataat 45274365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 49768896 - 49768944
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    ||||||||||||||||  ||||| | |||||||||||||||||||||||    
T  49768896 ttgtcaaaaaattgttgcaaaatggatgtacaaatatcatttctctttt 49768944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 54251477 - 54251521
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||| ||||||| ||| |||||||||||||||||||||||||||    
T  54251477 ttgtcgaaaaattattaaaaaatagttgtacaaatatcatttctc 54251521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 238 - 277
Target Start/End: Original strand, 9776364 - 9776403
Alignment:
Q  238 aaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  9776364 aaaaaattgtcaaaaaatagttgtacaaatatcatttctc 9776403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 234 - 281
Target Start/End: Original strand, 22920299 - 22920346
Alignment:
Q  234 tgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    ||||||||| |||||||||| | ||||| |||||||||||||||||||    
T  22920299 tgtcaaaaagttgttagaaattggttgtgcaaatatcatttctctttt 22920346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 234 - 281
Target Start/End: Complemental strand, 22971500 - 22971453
Alignment:
Q  234 tgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    ||||||||| |||||||||| | ||||| |||||||||||||||||||    
T  22971500 tgtcaaaaagttgttagaaattggttgtgcaaatatcatttctctttt 22971453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 238 - 277
Target Start/End: Original strand, 29407058 - 29407097
Alignment:
Q  238 aaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||| |||||||||||| |||||||||||||||||||||    
T  29407058 aaaaacttgttagaaaatggttgtacaaatatcatttctc 29407097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 32696822 - 32696861
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  32696822 aaaagttgttagaaaatggttgtacaaatatcatttctct 32696861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 172
Target Start/End: Complemental strand, 43358795 - 43358720
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaa 172  Q
    |||||||||||| |||| | || ||| |  ||| |||||||| ||||||| |||||||| ||||||||||||||||    
T  43358795 gagtagtgatatttgtacatcttttttaaacaatttttatgacaactttgtttttctctattttgattggtcaaaa 43358720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 279
Target Start/End: Original strand, 43608073 - 43608116
Alignment:
Q  236 tcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    |||||||||||| |||||||| ||||| ||||||||||||||||    
T  43608073 tcaaaaaattgtgagaaaatacttgtataaatatcatttctctt 43608116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 44170646 - 44170693
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    ||||||||||||| | | ||||| ||||||||||||||||||||||||    
T  44170646 ttgtcaaaaaattataacaaaatggttgtacaaatatcatttctcttt 44170693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 175
Target Start/End: Original strand, 46363912 - 46363947
Alignment:
Q  140 aactttgattttctctcttttgattggtcaaaaata 175  Q
    ||||||| ||||||||||||||||||||||||||||    
T  46363912 aactttggttttctctcttttgattggtcaaaaata 46363947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 48743754 - 48743707
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    ||||||||||||||||| ||| | |||||||||||||||||| |||||    
T  48743754 ttgtcaaaaaattgttaaaaattggttgtacaaatatcatttttcttt 48743707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 51389360 - 51389313
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    |||||||||||||||||  ||||  |||||||||||||||||||||||    
T  51389360 ttgtcaaaaaattgttactaaatgattgtacaaatatcatttctcttt 51389313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 53463103 - 53463142
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||||||||| ||||| ||||||||||||||||||||||    
T  53463103 aaaaattgttataaaatggttgtacaaatatcatttctct 53463142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 4577595 - 4577549
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctcttttttaa 285  Q
    |||||||||  |||||| |||||||||||||||||||||| ||||||    
T  4577595 aaaaattgtacgaaaatggttgtacaaatatcatttctctattttaa 4577549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 173
Target Start/End: Original strand, 5234358 - 5234436
Alignment:
Q  95 atgagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaa 173  Q
    |||||||||||||| || | |||  |||||| |||||||| ||| || |||  ||||||||||||| ||||||||||||    
T  5234358 atgagtagtgatatttgaacaaccatttgatacaacttttgtgacaattttttttttctctctttttattggtcaaaaa 5234436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 418 - 472
Target Start/End: Complemental strand, 6999308 - 6999254
Alignment:
Q  418 tgaatttgtcatatatcaatcaaattagtccctccgttcatttggggtgttaacg 472  Q
    ||||||||| | ||||||||||| ||||||||||||| || |||| |||||||||    
T  6999308 tgaatttgtaaaatatcaatcaatttagtccctccgtccaattggagtgttaacg 6999254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 237 - 279
Target Start/End: Original strand, 11546933 - 11546975
Alignment:
Q  237 caaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    |||||| |||||||||||| |||||| ||||||||||||||||    
T  11546933 caaaaagttgttagaaaatggttgtaaaaatatcatttctctt 11546975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 239 - 277
Target Start/End: Original strand, 15984782 - 15984820
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  15984782 aaaaattgttaaaaaatagttgtacaaatataatttctc 15984820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 173
Target Start/End: Original strand, 20956509 - 20956547
Alignment:
Q  135 atgataactttgattttctctcttttgattggtcaaaaa 173  Q
    |||| ||||||| ||||||||||||||||||||||||||    
T  20956509 atgacaactttgtttttctctcttttgattggtcaaaaa 20956547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 239 - 277
Target Start/End: Original strand, 31469022 - 31469060
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  31469022 aaaaattgttagaaaatggttgtacatatatcatttctc 31469060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 173
Target Start/End: Complemental strand, 33438197 - 33438151
Alignment:
Q  127 caacttttatgataactttgattttctctcttttgattggtcaaaaa 173  Q
    |||||||| ||||||| || |||||||||||||| ||||||||||||    
T  33438197 caacttttttgataaccttcattttctctctttttattggtcaaaaa 33438151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 35661624 - 35661670
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    ||||| ||||||||| | ||||| |||||||||||||||||||||||    
T  35661624 ttgtctaaaaattgtcataaaatggttgtacaaatatcatttctctt 35661670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 38844517 - 38844567
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttttt 283  Q
    |||||||||| |||| ||||| | |||||||||||||||||| ||||||||    
T  38844517 ttgtcaaaaagttgtgagaaagtggttgtacaaatatcatttttctttttt 38844567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 42853983 - 42853937
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    ||||| |||| |||| | |||||||||||||||||||||||||||||    
T  42853983 ttgtctaaaagttgtcaaaaaatagttgtacaaatatcatttctctt 42853937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 251 - 285
Target Start/End: Complemental strand, 43434373 - 43434339
Alignment:
Q  251 aaaatagttgtacaaatatcatttctcttttttaa 285  Q
    ||||| |||||||||||||||||||||||||||||    
T  43434373 aaaatggttgtacaaatatcatttctcttttttaa 43434339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 44257763 - 44257805
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    |||||||||||||||||  ||| ||||||||||||||||||||    
T  44257763 aaaaattgttagaaaatgattgcacaaatatcatttctctttt 44257805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 358 - 404
Target Start/End: Original strand, 50131185 - 50131231
Alignment:
Q  358 tgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatg 404  Q
    |||||||||||||||||||||||||  ||| | ||||||||||||||    
T  50131185 tgaatttgcacgaatcggacaaaaacgtcccccaatttatcgaaatg 50131231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 177
Target Start/End: Original strand, 1562468 - 1562505
Alignment:
Q  140 aactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||| |||||||| |||||||||||||||||||||    
T  1562468 aactttggttttctcttttttgattggtcaaaaataat 1562505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 244 - 277
Target Start/End: Complemental strand, 4974144 - 4974111
Alignment:
Q  244 ttgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||||| |||||||||||||||||||||||||||    
T  4974144 ttgttaaaaaatagttgtacaaatatcatttctc 4974111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 10994179 - 10994224
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||||||| ||||| | ||||| ||||||||||||||||||||||    
T  10994179 ttgtcaaaagattgtcacaaaatggttgtacaaatatcatttctct 10994224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 531 - 595
Target Start/End: Complemental strand, 13450213 - 13450148
Alignment:
Q  531 ggactaatttggccgatggcaaccaaaattttcaaggacgaaattgattga-ttgcataaaatgtt 595  Q
    |||||||||||||||||    |||||||||| |||||||| |||||||||| ||||| ||||||||    
T  13450213 ggactaatttggccgataatgaccaaaatttccaaggacggaattgattgatttgcagaaaatgtt 13450148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 20760293 - 20760252
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    |||| |||||| |||||| |||||||||||||||||||||||    
T  20760293 aaaagttgttaaaaaataattgtacaaatatcatttctcttt 20760252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 20766684 - 20766643
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    |||| |||||| |||||| |||||||||||||||||||||||    
T  20766684 aaaagttgttaaaaaataattgtacaaatatcatttctcttt 20766643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 25540012 - 25539967
Alignment:
Q  127 caacttttatgataactttgattttctctcttttgattggtcaaaa 172  Q
    |||||||||||| ||||||| |||| ||| ||||||||||||||||    
T  25540012 caacttttatgacaactttgtttttttctattttgattggtcaaaa 25539967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 31147275 - 31147230
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||||||||||||| | ||| | ||||||||||||||||||||||    
T  31147275 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttctct 31147230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 244 - 277
Target Start/End: Original strand, 33776851 - 33776884
Alignment:
Q  244 ttgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||||||||||| |||||||||||||||||||||    
T  33776851 ttgttagaaaatggttgtacaaatatcatttctc 33776884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 35017197 - 35017152
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    |||| ||||| |||| | ||||||||||||||||||||||||||||    
T  35017197 ttgtaaaaaagttgtcacaaaatagttgtacaaatatcatttctct 35017152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 35580170 - 35580129
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcattt 274  Q
    ||||||||||||||| ||||||| | ||||||||||||||||    
T  35580170 ttgtcaaaaaattgtcagaaaatggctgtacaaatatcattt 35580129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 251 - 280
Target Start/End: Original strand, 44272855 - 44272884
Alignment:
Q  251 aaaatagttgtacaaatatcatttctcttt 280  Q
    ||||||||||||||||||||||||||||||    
T  44272855 aaaatagttgtacaaatatcatttctcttt 44272884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 45779318 - 45779363
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||||||||||| | | |||||||||||| |||||||||||||||    
T  45779318 ttgtcaaaaaattataacaaaatagttgtataaatatcatttctct 45779363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 185; Significance: 1e-99; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 482 - 796
Target Start/End: Complemental strand, 17260757 - 17260444
Alignment:
Q  482 tggccgttaacttctcacatgagttgtcatgtcagatgccacataac-agggactaatttggccgatggcaaccaaaattttcaaggacgaaattgattg 580  Q
    |||| |||||| |||||||||  |||||||||||||||||||||||  |||||||||||||| | || |  |||||||||||||||||||||||||||||    
T  17260757 tggctgttaacctctcacatggattgtcatgtcagatgccacataagtagggactaatttggtcaatagtgaccaaaattttcaaggacgaaattgattg 17260658  T
Q  581 attgcataaaatgttatgcaatttaatctctgttatgtttgactaactatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaa 680  Q
    |||||| |||||||||||||||||| ||  |||||| ||||||| ||||||||| |||||||||||||||||||||||  |||  |||||| || |||||    
T  17260657 attgcagaaaatgttatgcaatttagtccttgttatatttgacttactatcaaatcgatccctaaattatattaaaaa--ccatcaaataaatccttgaa 17260560  T
Q  681 ttatataaacatatatcaatttgattctttaagcatatatgtgcagaacaaagtaaaaaagtcagaaaacgcaactttatccttgaaaataccatcaaat 780  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||| || |||||| ||||||||||||||||||||||    
T  17260559 ttatataaacaaatatcaatttgatccttgaagcatatatgtgtagaacaaagtaaaaaagtcagaacacacaacttcatccttgaaaataccatcaaat 17260460  T
Q  781 aagtcataagtcttaa 796  Q
    ||||||||||||||||    
T  17260459 aagtcataagtcttaa 17260444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 170; E-Value: 1e-90
Query Start/End: Original strand, 346 - 796
Target Start/End: Complemental strand, 5127527 - 5127075
Alignment:
Q  346 caaattcgttcttgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatggctattttgtttatgaatttgtcatatatcaatcaaattag 445  Q
    ||||||||| ||||||||||||| |||||||||||||  ||||| ||||||||||||||   | ||| |   |||||||||||||| |||||||||||||    
T  5127527 caaattcgtccttgaatttgcacaaatcggacaaaaacgtcctccaatttatcgaaatgcacactttatccctgaatttgtcatatctcaatcaaattag 5127428  T
Q  446 tccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataa-cagggactaatttggcc 544  Q
    ||| | ||| ||||||||| |||||||  ||| | |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||||| ||||      
T  5127427 tccttacgtccatttggggcgttaacggtgatgacgtggccgttaacctctcacatgggttgccatgtcagatgccacataagcagggactaaattggtt 5127328  T
Q  545 gatggcaaccaaaattttcaaggacgaaattgattgattgc-ataaaatgttatgcaatttaatctctgttatgtttgactaactatcaaagcgatccct 643  Q
    ||| |  || ||||||| ||||||| ||||||||||||| | | |||||||| ||||||||  || ||||||  ||| ||| ||||||||| |||||| |    
T  5127327 gatagtgacaaaaatttccaaggacaaaattgattgattccaaaaaaatgttgtgcaattttgtccctgttactttttacttactatcaaatcgatcctt 5127228  T
Q  644 aaattatattaaaaaacccacgaaataagtctttgaattatataaacatatat-caatttgattctttaagcatatatgtgcagaacaaagtaaaaaagt 742  Q
     ||||||||| ||||||||   ||||||||| ||||||| ||||||||||||| ||||||||| ||| |||||||||| ||||||| | ||| ||||||     
T  5127227 gaattatatt-aaaaacccgtcaaataagtccttgaattttataaacatatatccaatttgatccttgaagcatatatttgcagaagagagtgaaaaaga 5127129  T
Q  743 cagaaaacgcaactttatccttgaaaataccatcaaataagtcataagtcttaa 796  Q
    ||||| || |||||| ||||||||||||||||| ||||||||||||||||||||    
T  5127128 cagaacacacaacttcatccttgaaaataccattaaataagtcataagtcttaa 5127075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 347 - 796
Target Start/End: Complemental strand, 5134781 - 5134330
Alignment:
Q  347 aaattcgttcttgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatggctattttgtttatgaatttgtcatatatcaatcaaattagt 446  Q
    |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||   | ||| |   |||||||||||||| || |||||||||      
T  5134781 aaattcgtccttgaatttgcacgaatcggacaaaaacatcctccaatttatcgaaatgcacactttatccctgaatttgtcatatctccatcaaattata 5134682  T
Q  447 ccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataa-cagggactaatttggccg 545  Q
    || | ||| ||||||||| |||||||  ||| | |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||||| ||||  |    
T  5134681 ccttacgtccatttggggcgttaacggtgatgacgtggccgttaacctctcacatgggttgccatgtcagatgccacataagcagggactaaattggttg 5134582  T
Q  546 atggcaaccaaaattttcaaggacgaaattgattgattgcataaaa-tgttatgcaatttaatctctgttatgtttgactaactatcaaagcgatcccta 644  Q
    || |  || ||||||| ||||||| ||||||||||||| || |||| |||| ||||||||  || ||||||  ||| ||| ||||||||| |||||| |     
T  5134581 atagtgacaaaaatttccaaggacaaaattgattgattccaaaaaaatgttgtgcaattttgtccctgttactttttacttactatcaaatcgatccttg 5134482  T
Q  645 aattatattaaaaaacccacgaaataagtctttgaattatataaacatatatc-aatttgattctttaagcatatatgtgcagaacaaagtaaaaaagtc 743  Q
    |||||||||||||| ||  | ||||||||| ||||||| |||||||||||||| |||||||| ||| |||||||||| ||||||| | ||| |||||| |    
T  5134481 aattatattaaaaacccgtc-aaataagtccttgaattttataaacatatatccaatttgatccttgaagcatatatttgcagaagagagtgaaaaagac 5134383  T
Q  744 agaaaacgcaactttatccttgaaaataccatcaaataagtcataagtcttaa 796  Q
    |||| || |||||| |||||||||||||| || ||||||||||||||||||||    
T  5134382 agaacacacaacttcatccttgaaaatacaattaaataagtcataagtcttaa 5134330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 345 - 839
Target Start/End: Complemental strand, 54094244 - 54093750
Alignment:
Q  345 tcaaattcgttcttgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatggctattttgtttatgaatttgtcatatatcaatcaaatta 444  Q
    |||||||| | ||||||||||||| |||| |||||||| ||| |  ||||||||||||||     |||||   |||||||||||||| ||||||||||||    
T  54094244 tcaaattcatccttgaatttgcacaaatcagacaaaaacatctttcaatttatcgaaatgcacgctttgtccctgaatttgtcatatctcaatcaaatta 54094145  T
Q  445 gtccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataa-cagggactaatttggc 543  Q
    |||||| ||| |||||||||| || ||   |||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||  |||||| | |      
T  54094144 gtccctacgtccatttggggtattgacagtgataatgtggccgttaacctctcacatgagttgccatgtcagatgccacataagcatagactaaatcgat 54094045  T
Q  544 cgatggcaaccaaaattttcaaggacgaaattgattgattgcataaaatgttatgcaatttaatctctgttatgtttgactaactatcaaagcgatccct 643  Q
    |||| |  || |||||||  |||||||| ||||||| ||| || ||||| |||||||||  | || ||||||  ||| ||  ||||||||| |||||| |    
T  54094044 cgatagtgacaaaaatttcaaaggacgagattgattaatttcagaaaatattatgcaataaagtccctgttaatttttacatactatcaaatcgatcctt 54093945  T
Q  644 aaattatattaaaaaacccacgaaataagtctttgaattatataaacatatat-caatttgattctttaagcatatatgtgcagaacaaagtaaaaaagt 742  Q
    ||||||||||||||||||  | ||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||| |||| ||||||||||||| |     
T  54093944 aaattatattaaaaaaccgtc-aaataagtcattgaattatataaacatatattcaatttgattcttgaagcatatatttgcataacaaagtaaaaatga 54093846  T
Q  743 cagaaaacgcaactttatccttgaaaataccatcaaataagtcataagtcttaactatgaaatattgcatagggcaaaaacaacccaactatggagc 839  Q
    || || || |||| | |||||| |||||| ||| |||| ||| ||| ||||||| | | ||||||  |||| ||||||| |||||||||||||||||    
T  54093845 caaaacacacaacatcatcctttaaaataacattaaatcagtaatatgtcttaagtttaaaatatcacata-ggcaaaagcaacccaactatggagc 54093750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 346 - 796
Target Start/End: Complemental strand, 41625431 - 41624991
Alignment:
Q  346 caaattcgttcttgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatggctattttgtttatgaatttgtcatatatcaatcaaattag 445  Q
    ||||||||| | |||||||||||||||||||||||||| ||| | |||||||||||| |   | |||||   |||||||||||||| |||||||||||||    
T  41625431 caaattcgtccctgaatttgcacgaatcggacaaaaatgtcccccaatttatcgaaacgcacactttgtccctgaatttgtcatatctcaatcaaattag 41625332  T
Q  446 tccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataa-cagggactaatttggcc 544  Q
    ||||| | | ||||||||||||||| |  ||| |  ||| ||||||| ||||||||| |||| ||||||||||||||||||| |||||||||| ||||      
T  41625331 tccctacatccatttggggtgttaatggtgatgacatggtcgttaacctctcacatgggttgccatgtcagatgccacataagcagggactaaattggtt 41625232  T
Q  545 gatggcaaccaaaattttcaaggacgaaattgattgattgcataaaatgttatgcaatttaatctctgttatgtttgactaactatcaaagcgatcccta 644  Q
    ||| |  || |||| ||||||||||||||||||||||||||| |||||||| ||||||||  || ||||||  ||| ||| || |||||| |||||| ||    
T  41625231 gatagtgacaaaaaatttcaaggacgaaattgattgattgcaaaaaatgttgtgcaattttgtccctgttactttttacttaccatcaaatcgatcctta 41625132  T
Q  645 aattatattaaaaaacccacgaaataagtctttgaattatataaacatatat-caatttgattctttaagcatatatgtgcagaacaaagtaaaaaagtc 743  Q
    |||||||||||||| |   | |||||| || |||||||  |||||||||||| |||||| || ||||           ||||||||| ||| |||||| |    
T  41625131 aattatattaaaaatctgtc-aaataaatccttgaatttgataaacatatatccaatttaatccttt-----------tgcagaacagagtgaaaaagac 41625044  T
Q  744 agaaaacgcaactttatccttgaaaataccatcaaataagtcataagtcttaa 796  Q
    |||| ||  ||||||||| ||||||||||||| ||||||||||||||||||||    
T  41625043 agaacacaaaactttatctttgaaaataccattaaataagtcataagtcttaa 41624991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 832 - 967
Target Start/End: Original strand, 7589773 - 7589906
Alignment:
Q  832 tatggagcctaattcaaacaagtctgaatattacattttcaaaagcatattttaaatacgttttcatcaagcatcacttctttgaaaatctgggggttgg 931  Q
    ||||| || |||||||||||||||| |||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||  ||||||| |    
T  7589773 tatggggcataattcaaacaagtctaaatattacatttccaaaagcatattttaaatatgtttccatcaagcatcacttctttgaaaattcgggggtt-g 7589871  T
Q  932 ggataaactccatgaatttaggattgagtcgaaccg 967  Q
    ||||||||| |||||||||||| |||||||||||||    
T  7589872 ggataaacttcatgaatttagg-ttgagtcgaaccg 7589906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 858 - 966
Target Start/End: Complemental strand, 17260444 - 17260338
Alignment:
Q  858 aatattacattttcaaaagcatattttaaatacgttttcatcaagcatcacttctttgaaaatctgggggttggggataaactccatgaatttaggattg 957  Q
    |||||||||||| ||||||||||||||||||| |||| ||||||| ||||||| |||||||||| || |||| ||||||||||||||||||||||| |||    
T  17260444 aatattacatttccaaaagcatattttaaatatgtttccatcaagaatcacttatttgaaaatccggaggtt-gggataaactccatgaatttagg-ttg 17260347  T
Q  958 agtcgaacc 966  Q
    |||||||||    
T  17260346 agtcgaacc 17260338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 391 - 605
Target Start/End: Original strand, 7589330 - 7589550
Alignment:
Q  391 aatttatcgaaatggctattttgtttatgaatttgtcatatatcaatcaaattagtccctccgttcatttggggtgttaacgacgataatgtggccgtta 490  Q
    |||||||||||||||||||||| | | | |||||| ||||| ||||| || |||||||||||||| | ||||| |||||| |  | | |||||| |||||    
T  7589330 aatttatcgaaatggctattttatctttaaatttgccatatgtcaattaatttagtccctccgtttaattgggatgttaaaggtgttgatgtggtcgtta 7589429  T
Q  491 acttctcacatgagttgtcatgtcagatgccacat-----aacagggactaatttggccgatggcaaccaaaattttcaaggacgaaattgattga-ttg 584  Q
    |  | | ||||| ||||||||||||||||||||||     | ||||||||||||||| ||||    | |||||||| ||| ||| ||||||||||| |||    
T  7589430 atcttttacatgggttgtcatgtcagatgccacatatataagcagggactaatttggtcgataatgatcaaaatttccaatgacaaaattgattgatttg 7589529  T
Q  585 cataaaatgttatgcaattta 605  Q
    || |||||| |||||||||||    
T  7589530 cagaaaatgctatgcaattta 7589550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 40159715 - 40159795
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||||||| ||||||||| | ||||||| |||| ||||||| ||||||||||||||||||||||||||||||    
T  40159715 gagtagtgatatatgtacaactctttggtacaactttcatgacaactttggttttctctcttttgattggtcaaaaataat 40159795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 715 - 796
Target Start/End: Original strand, 7589618 - 7589699
Alignment:
Q  715 atatatgtgcagaacaaagtaaaaaagtcagaaaacgcaactttatccttgaaaataccatcaaataagtcataagtcttaa 796  Q
    |||||||||||||||||| ||||||| |||||| || |||||| |||||||||||||||| |||||||||||||| ||||||    
T  7589618 atatatgtgcagaacaaattaaaaaattcagaagacacaacttcatccttgaaaataccaccaaataagtcataaatcttaa 7589699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 628 - 739
Target Start/End: Original strand, 32843664 - 32843774
Alignment:
Q  628 tatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaatttgattctttaagcatatatgtgcaga 727  Q
    ||||||| ||||||||| ||||||| |||||||| |  ||||||||| |||||||||||||||| |||||||||||||  || | ||||||||||  |||    
T  32843664 tatcaaatcgatccctacattatatgaaaaaacc-ataaaataagtccttgaattatataaacagatatcaatttgatcattgatgcatatatgtttaga 32843762  T
Q  728 acaaagtaaaaa 739  Q
    ||||||||||||    
T  32843763 acaaagtaaaaa 32843774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 11335190 - 11335271
Alignment:
Q  96 tgagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    |||||||||||||||||| ||||||||| | |||||||||| | ||||||  ||||||||| ||||||||||||||||||||    
T  11335190 tgagtagtgatatatgtacaactctttggtacaacttttattacaactttagttttctctcatttgattggtcaaaaataat 11335271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 31017286 - 31017365
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||||||| |||||||||||  ||||| ||||| ||||||||||||||||| |||||||||| |||||||||    
T  31017286 gagtagtgatatatgtacaactctttgata-aacttctatgacaactttgattttctctcatttgattggtaaaaaataat 31017365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 51032515 - 51032595
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||||||| |||| ||| || ||||||| |||| |||||| ||||||| |||||||||||||||||||||||    
T  51032515 gagtagtgatatatgtacaacttttttatacaactttcatgacaactttaattttctatcttttgattggtcaaaaataat 51032595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 98 - 177
Target Start/End: Complemental strand, 41369760 - 41369681
Alignment:
Q  98 agtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    |||||||||||||||| |  |||||| | |||||||||||| ||||||  ||||||||||||||||||||||||||||||    
T  41369760 agtagtgatatatgtacacttctttggtacaacttttatgacaactttagttttctctcttttgattggtcaaaaataat 41369681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 841 - 968
Target Start/End: Original strand, 22219594 - 22219716
Alignment:
Q  841 taattcaaacaagtctgaatattacattttc-aaaagcatattttaaatacgttttcatcaagcatcacttctttgaaaatctgggggttggggataaac 939  Q
    ||||| |||||||||| |||||||||||||| ||||||||| ||||| || |    |||||| |||||||||||||||||||  |||||| | |||||||    
T  22219594 taatttaaacaagtctaaatattacattttctaaaagcataatttaattagg----catcaaacatcacttctttgaaaatcccggggtt-gagataaac 22219688  T
Q  940 tccatgaatttaggattgagtcgaaccgg 968  Q
    |||||||| ||||| |||||| |||||||    
T  22219689 tccatgaa-ttagggttgagtagaaccgg 22219716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 40159865 - 40159912
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||    
T  40159865 ttgtcaaaaagttgttagaaaatagttgtacaaatatcatttctcttt 40159912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 668 - 785
Target Start/End: Original strand, 35862704 - 35862821
Alignment:
Q  668 ataagtctttgaattatataaacatatatcaatttgattctttaagcatatatgtgcagaacaaagtaaaaaagtcagaaaacgcaactttatccttgaa 767  Q
    ||||||| ||||||||| |||||| || ||||| |||| |||   |||||||||||||||||||||||||||||| |  | || ||| || ||||||||     
T  35862704 ataagtccttgaattatttaaacagatgtcaatgtgatccttgttgcatatatgtgcagaacaaagtaaaaaagtaaagagacacaatttgatccttgat 35862803  T
Q  768 aataccatcaaataagtc 785  Q
     | |||||||||||||||    
T  35862804 tagaccatcaaataagtc 35862821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 346 - 414
Target Start/End: Original strand, 5133007 - 5133075
Alignment:
Q  346 caaattcgttcttgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatggctattttgt 414  Q
    |||||| || |||||||||||||||||||||||||||  ||||| ||||||||||||||  ||||||||    
T  5133007 caaattagtccttgaatttgcacgaatcggacaaaaacgtcctccaatttatcgaaatgcatattttgt 5133075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 47988512 - 47988560
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||    
T  47988512 ttgtcaaaaagttgttagaaaatagttgtacaaatatcatttcactttt 47988560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 47997799 - 47997847
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||    
T  47997799 ttgtcaaaaagttgttagaaaatagttgtacaaatatcatttcactttt 47997847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 48007086 - 48007134
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||    
T  48007086 ttgtcaaaaagttgttagaaaatagttgtacaaatatcatttcactttt 48007134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 48179080 - 48179124
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  48179080 ttgtcaaaaaactgttagaaaatagttgtacaaatatcatttctc 48179124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 896 - 968
Target Start/End: Complemental strand, 54093654 - 54093584
Alignment:
Q  896 catcaagcatcacttctttgaaaatctgggggttggggataaactccatgaatttaggattgagtcgaaccgg 968  Q
    ||||||| |||||||||||| ||||||||||||| ||||||||||||||||| ||| |||||||| |||||||    
T  54093654 catcaagtatcacttctttggaaatctgggggtt-gggataaactccatgaactta-gattgagttgaaccgg 54093584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 666 - 785
Target Start/End: Original strand, 22219229 - 22219348
Alignment:
Q  666 aaataagtctttgaattatataaacatatatcaatttgattctttaagcatatatgtgcagaacaaagtaaaaaagtcagaaaacgcaactttatccttg 765  Q
    |||||| || ||||||||| |||||| || |||||  ||| |||   ||||||||||||||||||||||| |||||| |  | || ||| || |||||||    
T  22219229 aaataaatccttgaattatttaaacagatgtcaatgcgatccttggtgcatatatgtgcagaacaaagtacaaaagtaaagatacacaatttaatccttg 22219328  T
Q  766 aaaataccatcaaataagtc 785  Q
    || |||||||||||||||||    
T  22219329 aatataccatcaaataagtc 22219348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 346 - 404
Target Start/End: Original strand, 5125812 - 5125870
Alignment:
Q  346 caaattcgttcttgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatg 404  Q
    |||||| || |||||||||||||||||||||||||||  ||||| ||||||||||||||    
T  5125812 caaattagtccttgaatttgcacgaatcggacaaaaacgtcctccaatttatcgaaatg 5125870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 11335329 - 11335375
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||    
T  11335329 ttgtcaaaaagttgttagaaaatggttgtacaaatatcatttctctt 11335375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 531 - 595
Target Start/End: Original strand, 26447934 - 26447999
Alignment:
Q  531 ggactaatttggccgatggcaaccaaaattttcaaggacgaaattgattga-ttgcataaaatgtt 595  Q
    ||||||||||||| ||| | ||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  26447934 ggactaatttggctgatagtaaccaaaatttccaaggacgaaattgattgatttgcagaaaatgtt 26447999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 51032651 - 51032696
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  51032651 ttgtcaaaaagttgttagaaaatggttgtacaaatatcatttctct 51032696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 509 - 595
Target Start/End: Original strand, 30501281 - 30501369
Alignment:
Q  509 catgtcagatgccacataa-cagggactaatttggccgatggcaaccaaaattttcaaggacgaaattgattga-ttgcataaaatgtt 595  Q
    |||||||||||||||| || ||  |||||||||||| ||| |  |||||||||| ||||||||||||||||||| ||||| ||||||||    
T  30501281 catgtcagatgccacacaagcaaagactaatttggctgatagtgaccaaaatttccaaggacgaaattgattgatttgcagaaaatgtt 30501369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 233 - 284
Target Start/End: Complemental strand, 5398962 - 5398911
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttttta 284  Q
    ||||||||||||||| | ||| | ||||||||||||||||||||||||||||    
T  5398962 ttgtcaaaaaattgtcacaaagtggttgtacaaatatcatttctctttttta 5398911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 233 - 288
Target Start/End: Complemental strand, 26279928 - 26279873
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttttttaattt 288  Q
    |||||||||| |||| ||||| | |||||||||||||||||||||||| |||||||    
T  26279928 ttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttctctttgttaattt 26279873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 39604273 - 39604320
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    ||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  39604273 ttgtcaaaaaattgttgaaaaatggttgtacaaatatcatttctcttt 39604320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 43176380 - 43176309
Alignment:
Q  94 aatgagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattg 165  Q
    ||||||||||||||||| || |||  |||||| ||||||| ||||||||||| |||| ||||||||| ||||    
T  43176380 aatgagtagtgatatatatacaaccatttgatacaactttgatgataacttttatttgctctctttttattg 43176309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 49761219 - 49761258
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  49761219 aaaaattgttagaaaatggttgtacaaatatcatttctct 49761258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 274
Target Start/End: Original strand, 30251010 - 30251048
Alignment:
Q  236 tcaaaaaattgttagaaaatagttgtacaaatatcattt 274  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  30251010 tcaaaaaattgttagaaaatggttgtacaaatatcattt 30251048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 279
Target Start/End: Original strand, 39350603 - 39350645
Alignment:
Q  237 caaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    ||||||||||||| |||||| ||||||||||||||||||||||    
T  39350603 caaaaaattgttaaaaaataattgtacaaatatcatttctctt 39350645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 280
Target Start/End: Complemental strand, 50745408 - 50745366
Alignment:
Q  238 aaaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    |||||||||||||||||| |||||||||||||||||| |||||    
T  50745408 aaaaaattgttagaaaatggttgtacaaatatcatttttcttt 50745366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 13724337 - 13724378
Alignment:
Q  135 atgataactttgattttctctcttttgattggtcaaaaataa 176  Q
    |||| ||||||||||||||||||||| |||||||||||||||    
T  13724337 atgacaactttgattttctctcttttaattggtcaaaaataa 13724378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 626 - 703
Target Start/End: Original strand, 30501717 - 30501793
Alignment:
Q  626 actatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaatttg 703  Q
    |||||||||  ||||| || ||||||||||||||||  | ||||||||  |||||||||||||||||| |||||||||    
T  30501717 actatcaaattgatccttacattatattaaaaaaccatc-aaataagttattgaattatataaacataaatcaatttg 30501793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 37894276 - 37894317
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    |||| |||||||||||| ||||||||||||||||||||||||    
T  37894276 aaaagttgttagaaaatggttgtacaaatatcatttctcttt 37894317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 41369641 - 41369600
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcattt 274  Q
    ||||||||||||| ||||||||| ||||||||||||||||||    
T  41369641 ttgtcaaaaaattattagaaaatggttgtacaaatatcattt 41369600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 45186585 - 45186626
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    ||||||||||||||||| |||||||||||||| |||||||||    
T  45186585 aaaaattgttagaaaatggttgtacaaatatcttttctcttt 45186626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 173
Target Start/End: Complemental strand, 2812463 - 2812387
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaa 173  Q
    ||||||| |||||||||||||| |||||  ||||||| ||||||| ||| ||||||| |||| | ||||||| ||||    
T  2812463 gagtagtaatatatgtataactatttgagacaactttaatgataattttcattttctttcttcttattggtccaaaa 2812387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 31017421 - 31017465
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||    
T  31017421 ttgtcaaaaagttgttagaaaatgattgtacaaatatcatttctc 31017465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 37134633 - 37134677
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||| |||||||||| | |||||||||||||||||||||||||||    
T  37134633 ttgttaaaaaattgtcataaaatagttgtacaaatatcatttctc 37134677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 39350458 - 39350538
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||| |||||| | ||||| ||| |||| ||| ||||||||||| |||  ||||||||  ||||||||||||||||||||    
T  39350458 gagtaatgatatttatataattctgtgatacaatttttatgataattttagttttctcttatttgattggtcaaaaataat 39350538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 348 - 404
Target Start/End: Original strand, 41623665 - 41623721
Alignment:
Q  348 aattcgttcttgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatg 404  Q
    ||||||| | |||||||||||||||||||||||||| | | | ||||||||||||||    
T  41623665 aattcgtccctgaatttgcacgaatcggacaaaaatgttccccaatttatcgaaatg 41623721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 251 - 283
Target Start/End: Original strand, 50559257 - 50559289
Alignment:
Q  251 aaaatagttgtacaaatatcatttctctttttt 283  Q
    |||||||||||||||||||||||||||||||||    
T  50559257 aaaatagttgtacaaatatcatttctctttttt 50559289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 55467002 - 55466958
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||||||||| ||| ||||| |||||||||||||||||||||    
T  55467002 ttgtcaaaaaattcttataaaatggttgtacaaatatcatttctc 55466958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 282
Target Start/End: Original strand, 7867756 - 7867787
Alignment:
Q  251 aaaatagttgtacaaatatcatttctcttttt 282  Q
    ||||||||||||||||||||||||||||||||    
T  7867756 aaaatagttgtacaaatatcatttctcttttt 7867787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 176
Target Start/End: Complemental strand, 22154046 - 22153967
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataa 176  Q
    |||||||||||| |||| |||  |||| | ||||||| |||| |||||| |||| ||||||||| ||||||| |||||||    
T  22154046 gagtagtgatatttgtacaaccatttggtacaactttaatgacaactttcatttgctctcttttcattggtccaaaataa 22153967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 22813116 - 22813069
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    |||||||||| |||| ||||| | ||||||||||||||||||||||||    
T  22813116 ttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttctcttt 22813069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 35376578 - 35376625
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    ||||| ||||||||| | ||||| ||||||||||||||||||||||||    
T  35376578 ttgtctaaaaattgtcacaaaatggttgtacaaatatcatttctcttt 35376625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 238 - 277
Target Start/End: Complemental strand, 45205327 - 45205288
Alignment:
Q  238 aaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  45205327 aaaaaattgtcacaaaatagttgtacaaatatcatttctc 45205288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 45528969 - 45529016
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    ||||| |||| |||| | ||||||||||||||||||||||||||||||    
T  45528969 ttgtctaaaagttgtcaaaaaatagttgtacaaatatcatttctcttt 45529016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 47849716 - 47849669
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    ||||||||||||| | | ||||| ||||||||||||||||||||||||    
T  47849716 ttgtcaaaaaattatcacaaaatggttgtacaaatatcatttctcttt 47849669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 479 - 569
Target Start/End: Original strand, 49494621 - 49494712
Alignment:
Q  479 atgtggccgttaacttctcacatgagttgtcatgtcagatgccacataa-cagggactaatttggccgatggcaaccaaaattttcaaggac 569  Q
    |||||||||||||| ||||||||    || ||||||| | |||||| || ||||||||||| |||||||| | |||||| ||||||||||||    
T  49494621 atgtggccgttaacctctcacattgactgccatgtcaaacgccacacaagcagggactaatatggccgattgtaaccaacattttcaaggac 49494712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 51410850 - 51410803
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    |||||||||| |||| ||||| | ||||||||||||||||||||||||    
T  51410850 ttgtcaaaaagttgtgagaaagtggttgtacaaatatcatttctcttt 51410803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 53932418 - 53932465
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    ||||| ||||||||| | ||||| ||||||||||||||||||||||||    
T  53932418 ttgtccaaaaattgtcacaaaatggttgtacaaatatcatttctcttt 53932465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 108475 - 108429
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    ||||||||||||||| | ||| | |||||||||||||||||||||||    
T  108475 ttgtcaaaaaattgtcacaaagtggttgtacaaatatcatttctctt 108429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 173
Target Start/End: Original strand, 28300533 - 28300611
Alignment:
Q  95 atgagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaa 173  Q
    |||||||||||||| || | |||  | |||| ||||| || ||| |||||| |||||||||||||| ||||||||||||    
T  28300533 atgagtagtgatatttgaacaaccatatgatacaactcttgtgacaacttttattttctctcttttcattggtcaaaaa 28300611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 173
Target Start/End: Complemental strand, 29706087 - 29706009
Alignment:
Q  95 atgagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaa 173  Q
    |||||||||||||| || | |||| |||||| |||||||| ||| |||||   ||||||||||||| |||||| |||||    
T  29706087 atgagtagtgatatttgaacaactatttgatacaacttttgtgacaacttcttttttctctcttttcattggtaaaaaa 29706009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 32008077 - 32008031
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    |||||||||| |||||||||| | ||||| |||||||||||||||||    
T  32008077 ttgtcaaaaagttgttagaaattggttgtgcaaatatcatttctctt 32008031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 37215258 - 37215304
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    ||||||||||||||| ||||| | |||||| ||||||||||||||||    
T  37215258 ttgtcaaaaaattgtaagaaagtggttgtataaatatcatttctctt 37215304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 38363254 - 38363296
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    ||||||| ||| |||||| ||||||||||||||||||||||||    
T  38363254 aaaaattattaaaaaataattgtacaaatatcatttctctttt 38363296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 534 - 595
Target Start/End: Complemental strand, 40963270 - 40963208
Alignment:
Q  534 ctaatttggccgatggcaaccaaaattttcaaggacgaaattgattga-ttgcataaaatgtt 595  Q
    |||||||||||||| | ||||||||||| ||| || |||||||||||| ||||| ||||||||    
T  40963270 ctaatttggccgatagtaaccaaaatttccaaagatgaaattgattgatttgcagaaaatgtt 40963208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 239 - 277
Target Start/End: Original strand, 48944743 - 48944781
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  48944743 aaaagttgttagaaaatggttgtacaaatatcatttctc 48944781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 239 - 277
Target Start/End: Complemental strand, 52714771 - 52714733
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  52714771 aaaaattgttagaaaatggatgtacaaatatcatttctc 52714733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 251 - 280
Target Start/End: Complemental strand, 884560 - 884531
Alignment:
Q  251 aaaatagttgtacaaatatcatttctcttt 280  Q
    ||||||||||||||||||||||||||||||    
T  884560 aaaatagttgtacaaatatcatttctcttt 884531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 284
Target Start/End: Original strand, 16267930 - 16267975
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctctttttta 284  Q
    ||||||| |||||||||  || ||||||||||||||||||||||||    
T  16267930 aaaaattattagaaaatgattatacaaatatcatttctctttttta 16267975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 240 - 277
Target Start/End: Original strand, 23869001 - 23869038
Alignment:
Q  240 aaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  23869001 aaaattgttataaaatggttgtacaaatatcatttctc 23869038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 46344452 - 46344411
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    ||||||||| | ||| ||||||||||||||||||||||||||    
T  46344452 aaaaattgtaacaaattagttgtacaaatatcatttctcttt 46344411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 46473287 - 46473234
Alignment:
Q  120 tttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaa 173  Q
    |||||| |||||||||||| |||||   ||||||||||||| ||||||||||||    
T  46473287 tttgatacaacttttatgacaacttcttttttctctcttttcattggtcaaaaa 46473234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 177
Target Start/End: Original strand, 47988417 - 47988454
Alignment:
Q  140 aactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  47988417 aactttgattttctcttctttgattggtcaaaaataat 47988454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 177
Target Start/End: Original strand, 47997704 - 47997741
Alignment:
Q  140 aactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  47997704 aactttgattttctcttctttgattggtcaaaaataat 47997741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 177
Target Start/End: Original strand, 48006991 - 48007028
Alignment:
Q  140 aactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  48006991 aactttgattttctcttctttgattggtcaaaaataat 48007028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 48649624 - 48649583
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcattt 274  Q
    |||||||||| |||||||||| | ||||||||||||||||||    
T  48649624 ttgtcaaaaagttgttagaaagtggttgtacaaatatcattt 48649583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 52678512 - 52678557
Alignment:
Q  127 caacttttatgataactttgattttctctcttttgattggtcaaaa 172  Q
    ||||||| |||||||||||| |||||||| ||||||||||| ||||    
T  52678512 caactttcatgataactttgtttttctctattttgattggttaaaa 52678557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 55196441 - 55196490
Alignment:
Q  128 aacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    |||||| ||||||||||| |||||||||||||| ||| ||| ||||||||    
T  55196441 aactttgatgataactttcattttctctctttttattagtccaaaataat 55196490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 171; Significance: 3e-91; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 171; E-Value: 3e-91
Query Start/End: Original strand, 346 - 833
Target Start/End: Complemental strand, 6058550 - 6058062
Alignment:
Q  346 caaattcgttcttgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatggctattttgtttatgaatttgtcatatatcaatcaaattag 445  Q
    ||||||||| |||||||||||| |||| |||||||||  | ||| ||||||||||||||   | ||| |   |||||||||||||| |||||||||||||    
T  6058550 caaattcgtccttgaatttgcatgaattggacaaaaacgttctccaatttatcgaaatgcacactttatccttgaatttgtcatatctcaatcaaattag 6058451  T
Q  446 tccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataa-cagggactaatttggcc 544  Q
    ||| | ||| ||||||||| |||||||  ||| | |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||||| ||||      
T  6058450 tccttacgtccatttggggcgttaacggtgatgacgtggccgttaacctctcacatgtgttgccatgtcagatgccacataagcagggactaaattggtt 6058351  T
Q  545 gatggcaaccaaaattttcaaggacgaaattgattgattgcataaaa-tgttatgcaatttaatctctgttatgtttgactaactatcaaagcgatccct 643  Q
    ||| |  || ||||||| ||||||||||||||||||||| || |||| |||| ||||||||  ||  |||||  ||| ||| ||||||||| |||||| |    
T  6058350 gatagtgacaaaaatttccaaggacgaaattgattgattccaaaaaaatgttgtgcaattttgtccatgttactttttacttactatcaaatcgatcctt 6058251  T
Q  644 aaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatc-aatttgattctttaagcatatatgtgcagaacaaagtaaaaaagt 742  Q
     |||||||||||||| ||  | ||||||||| || |||| |||||||||||||| |||||||| ||| |||||||||| ||||||| | ||| ||||||     
T  6058250 gaattatattaaaaacccgtc-aaataagtccttaaattttataaacatatatccaatttgatccttgaagcatatatttgcagaaaagagtgaaaaaga 6058152  T
Q  743 cagaaaacgcaactttatccttgaaaataccatcaaataagtcataagtcttaactatgaaatattgcatagggcaaaaacaacccaacta 833  Q
    ||||| || |||||| ||||||||||||||||| |||||||||||||||||||| | ||||||||| |||| ||||||||||||| |||||    
T  6058151 cagaacacacaacttcatccttgaaaataccattaaataagtcataagtcttaagtttgaaatattacata-ggcaaaaacaaccaaacta 6058062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 150; E-Value: 9e-79
Query Start/End: Original strand, 346 - 796
Target Start/End: Original strand, 25971691 - 25972143
Alignment:
Q  346 caaattcgttcttgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatggctattttgtttatgaatttgtcatatatcaatcaaattag 445  Q
    ||||||||| | ||||||| |||||||||||||||||  |||  ||||||||| |||||   | |||||   |||||||||||||| |||||||||||||    
T  25971691 caaattcgtccctgaatttccacgaatcggacaaaaacgtcccataatttatcaaaatgcacactttgtccttgaatttgtcatatctcaatcaaattag 25971790  T
Q  446 tccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataa-cagggactaatttggcc 544  Q
    ||||| |||  |||||||| |||||||  ||| | |||||||||||| |||||||||||||| |||||||||| |||||||| ||| |||||| ||||      
T  25971791 tccctacgtctatttggggcgttaacggtgatgacgtggccgttaacctctcacatgagttgccatgtcagataccacataagcagagactaaattggtt 25971890  T
Q  545 gatggcaaccaaaatt-ttcaaggacgaaattgattgattgcataaaatgttatgcaatttaatctctgttatgtttgactaactatcaaagcgatccct 643  Q
    ||| |  || ||||   |||||||| ||||||||||||||||| |||||||| ||||||||  ||  |||||| ||| ||| ||||| | | |||||| |    
T  25971891 gatagtgacaaaaaaaattcaaggatgaaattgattgattgcaaaaaatgttgtgcaattttgtccatgttattttttacttactataacatcgatcctt 25971990  T
Q  644 aaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatc-aatttgattctttaagcatatatgtgcagaacaaagtaaaaaagt 742  Q
    |||||| |||||||| |||   ||||||||||||||||| |||||||||||||| ||||||||  || || ||||||| ||||||||| ||| ||||||     
T  25971991 aaattacattaaaaa-cccgttaaataagtctttgaattttataaacatatatccaatttgatctttgaaacatatatttgcagaacagagtgaaaaaga 25972089  T
Q  743 cagaaaacgcaactttatccttgaaaataccatcaaataagtcataagtcttaa 796  Q
    ||||| || |||||| ||||||||||||||||| ||||||||||||||||||||    
T  25972090 cagaacacacaacttcatccttgaaaataccattaaataagtcataagtcttaa 25972143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 347 - 796
Target Start/End: Original strand, 46866477 - 46866927
Alignment:
Q  347 aaattcgttcttgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatggctattttgtttatgaatttgtcatatatcaatcaaattagt 446  Q
    |||||||| | |||||||||| ||||||||||||||| ||||| ||||||||||||||   | |||||   | |||||||||||| | ||||||||||||    
T  46866477 aaattcgtccctgaatttgcaagaatcggacaaaaatgtcctccaatttatcgaaatgcacactttgtccctaaatttgtcatatttgaatcaaattagt 46866576  T
Q  447 ccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataa-cagggactaatttggccg 545  Q
    ||||  ||  |||||||| |||||||  ||| | |||||||||||| ||||| ||| |||| ||||||||||||||||||| |||||||||| |  |  |    
T  46866577 ccctatgtctatttggggcgttaacggtgatgacgtggccgttaacctctcatatgggttgccatgtcagatgccacataaacagggactaaatatgttg 46866676  T
Q  546 atggcaaccaaaattttcaaggacgaaattgattgattgcataaaatgttatgcaatttaatctctgttatgtttgactaactatcaaagcgatccctaa 645  Q
    || |  || ||||||| |||||||||||||||||||||||| |||||||| ||||||||  || ||||||  ||| ||| | ||||||| | |||| |||    
T  46866677 atagtgacaaaaatttccaaggacgaaattgattgattgcaaaaaatgttgtgcaattttgtccctgttactttttacttattatcaaatcaatccttaa 46866776  T
Q  646 attatattaaaaaacccacgaaataagtctttgaattatataaacatatatc-aatttgattctttaagcatatatgtgcagaacaaagtaaaaaagtca 744  Q
    ||||||||||||| ||  | ||||||||| ||| |||  |||||||||| || |||||||| ||| || ||||||| ||||||||| ||| ||||||  |    
T  46866777 attatattaaaaatccgtc-aaataagtccttggatttcataaacatatctccaatttgatccttgaaacatatatttgcagaacagagtgaaaaagaaa 46866875  T
Q  745 gaaaacgcaactttatccttgaaaataccatcaaataagtcataagtcttaa 796  Q
    ||| || |||||| ||||||||||||||||| ||||||||||||||||||||    
T  46866876 gaacacacaacttcatccttgaaaataccattaaataagtcataagtcttaa 46866927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 347 - 605
Target Start/End: Complemental strand, 43009753 - 43009494
Alignment:
Q  347 aaattcgttcttgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatggctattttgtttatgaatttgtcatatatcaatcaaattagt 446  Q
    ||||| || |||||||||||||||||| || |||||  |||   ||||||||||||||||||||||||    ||||||||||||| ||||||||| ||||    
T  43009753 aaatttgtccttgaatttgcacgaatcagataaaaacgtccctcaatttatcgaaatggctattttgtccccgaatttgtcatatgtcaatcaaactagt 43009654  T
Q  447 ccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataac-agggactaatttggccg 545  Q
     ||| ||| ||||| |||||||||||  ||| | ||||||||| || |||| ||||  ||||||||||||||| |||||||  |||||||||||||||||    
T  43009653 tccttcgtccatttagggtgttaacggtgatgacgtggccgttgacctctctcatggattgtcatgtcagatgtcacataagtagggactaatttggccg 43009554  T
Q  546 atggcaaccaaaattttcaaggacgaaattgattgattgcataaaatgttatgcaattta 605  Q
    || |  |||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  43009553 atagtgaccaaaatttccaaggacgaaattgattgattgcaaaaaatgttatgcaattta 43009494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 802 - 968
Target Start/End: Complemental strand, 48457098 - 48456934
Alignment:
Q  802 aaatattgcatagggcaaaaacaacccaactatggagcctaattcaaacaagtctgaatattacattttcaaaagcatattttaaatacgttttcatcaa 901  Q
    ||||||| ||||||  ||||  |||||||||||||  | |||||||||||||||| |||||||||||| ||||| |||||||||||||||||| ||||||    
T  48457098 aaatattacataggtaaaaagaaacccaactatgggacataattcaaacaagtctaaatattacatttccaaaaacatattttaaatacgtttccatcaa 48456999  T
Q  902 gcatcacttctttgaaaatctgggggttggggataaactccatgaatttaggattgagtcgaaccgg 968  Q
    |||||||||||||| ||||||||||||| |||||||||||| |||||||||| |||| |||||||||    
T  48456998 gcatcacttctttggaaatctgggggtt-gggataaactccgtgaatttagg-ttgactcgaaccgg 48456934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 618 - 763
Target Start/End: Complemental strand, 11683524 - 11683380
Alignment:
Q  618 tttgactaactatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaatttgattctttaagcata 717  Q
    ||||||||||||||||| ||||||||| ||||||||||||| ||||  ||||||||| ||||||||| |||  | ||||||||||||||||| |||||||    
T  11683524 tttgactaactatcaaatcgatccctacattatattaaaaa-cccatcaaataagtccttgaattatttaattaaatatcaatttgattcttaaagcata 11683426  T
Q  718 tatgtgcagaacaaagtaaaaaagtcagaaaacgcaactttatcct 763  Q
    |||||||||||||||||||||||||||||| || |||||| |||||    
T  11683425 tatgtgcagaacaaagtaaaaaagtcagaagacacaacttgatcct 11683380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 346 - 836
Target Start/End: Complemental strand, 31915151 - 31914666
Alignment:
Q  346 caaattcgttcttgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatggctattttgtttatgaatttgtcatatatcaatcaaattag 445  Q
    |||||||||||||| |||| |||||||||||||||||  ||| |||||| |||||||||     |||||   |||||||  || |  || |||||| |||    
T  31915151 caaattcgttcttggattttcacgaatcggacaaaaacgtcccctaattaatcgaaatgcacgctttgtccctgaatttaacaaacgtccatcaaaatag 31915052  T
Q  446 tccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataa-cagggactaatttggcc 544  Q
    ||||| ||| ||||||||  |||||||  ||| | ||| | |||||| ||||| ||  |||||||||||||| |||| ||||  ||||||||| |||       
T  31915051 tccctacgtccatttgggacgttaacgttgatgacgtgactgttaacatctcagataggttgtcatgtcagacgccaaataagtagggactaaattgatg 31914952  T
Q  545 gatggcaaccaaaattttcaaggacgaaattgattgattgcataaaatgttatgcaatttaatctctgttatgtttgactaactatcaaagcgatcccta 644  Q
     ||    |  ||||  ||||||||||||||||||||||| |  | ||| ||||| |||  | || ||||||  ||| ||| ||||||||| ||||||||     
T  31914951 tataatga-aaaaaaattcaaggacgaaattgattgatttctgacaatattatgaaatacagtccctgttaatttttacttactatcaaatcgatccctg 31914853  T
Q  645 aattatattaaaaaacccacgaaataagtctttgaattatataaacata-tatcaatttgattctttaagcatatatgtgcagaacaaagtaaaaaagtc 743  Q
    |||||  ||||||||||  | ||||||||| |||||||||||||||||| | |||| ||||| ||| |||||||||| ||||||||||| | |||||  |    
T  31914852 aattactttaaaaaaccgtc-aaataagtccttgaattatataaacatattttcaacttgatccttgaagcatatatttgcagaacaaattgaaaaa--c 31914756  T
Q  744 agaaaacgcaactttatccttgaaaataccatcaaataagtcataagtcttaactatgaaatattgcatagggcaaaaacaacccaactatgg 836  Q
    | || || |||||| ||||||||||||||||| |||||||||||  ||||||| | ||||||||| |||| ||||||| ||||||||||||||    
T  31914755 acaacacacaacttcatccttgaaaataccattaaataagtcat--gtcttaagtttgaaatattacata-ggcaaaagcaacccaactatgg 31914666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 413 - 583
Target Start/End: Complemental strand, 11685652 - 11685481
Alignment:
Q  413 gtttatgaatttgtcatatatcaatcaaattagtccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatg 512  Q
    |||| |||||||||||||| |||||||| |||||| ||| || || |||| |||||||||  | | | |||||||||||| ||||||||| |||| ||||    
T  11685652 gtttctgaatttgtcatatgtcaatcaatttagtcactctgtccaattggagtgttaacggtgctgacgtggccgttaacctctcacatgggttgccatg 11685553  T
Q  513 tcagatgccacataa-cagggactaatttggccgatggcaaccaaaattttcaaggacgaaattgattgatt 583  Q
    || ||||||||| || ||||||||||| ||| |||| || |||||||||| ||||||  |||||||||||||    
T  11685552 tcggatgccacagaagcagggactaatgtggtcgatagcgaccaaaatttccaaggatcaaattgattgatt 11685481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 21153234 - 21153154
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||||||| |||| |||| | ||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  21153234 gagtagtgatatatgtacaactttttggtacaactttcatgacaactttgattttctctcttttgattggtcaaaaataat 21153154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 36920967 - 36920887
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||||||| ||||||||| | |||||||||| | ||||||||||||||||| ||||||||||||||||||||    
T  36920967 gagtagtgatatatgtacaactctttggtacaacttttattacaactttgattttctctcatttgattggtcaaaaataat 36920887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 42641017 - 42640945
Alignment:
Q  105 atatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||| ||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  42641017 atatatgtacaactctttggtacaacttttatgataactttgattttctcttttttgattggtcaaaaataat 42640945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 27075644 - 27075570
Alignment:
Q  103 tgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||| ||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  27075644 tgatatatgtacaactctttggtacaacttttatgataattttggttttctctcttttgattggtcaaaaataat 27075570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 27202667 - 27202741
Alignment:
Q  103 tgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||| ||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  27202667 tgatatatgtacaactctttggtacaacttttatgataattttggttttctctcttttgattggtcaaaaataat 27202741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 94 - 177
Target Start/End: Complemental strand, 33212211 - 33212128
Alignment:
Q  94 aatgagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    |||||||||||||||||||| ||||||||| | |||||| ||||| |||||| ||| |||||| ||||||||||||||||||||    
T  33212211 aatgagtagtgatatatgtacaactctttggtacaacttctatgacaactttaattgtctctcatttgattggtcaaaaataat 33212128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 433 - 836
Target Start/End: Complemental strand, 23966093 - 23965689
Alignment:
Q  433 tcaatcaaattagtccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataa-cagg 531  Q
    ||||||||| |||||||| ||| ||||||||| |||||||  ||| | ||||| |||||| | ||| ||| | || ||||||||||| ||||||| ||||    
T  23966093 tcaatcaaaatagtccctacgtccatttggggcgttaacggtgatgacgtggctgttaacgtttcagatgcggtgccatgtcagatgtcacataagcagg 23965994  T
Q  532 gactaatttggccgatggcaaccaaaattttcaaggacgaaattgattgattgcataaaatgttatgcaatttaatctctgttatgtttgactaactatc 631  Q
    |||||| |||    ||     | ||||  ||||||||||||||||||||||| || ||||| || |   ||  | || || |||  ||| ||| ||||||    
T  23965993 gactaaattgatgtataatgtcaaaaaaattcaaggacgaaattgattgatttcagaaaatattttcttataaagtc-ctattaattttaacttactatc 23965895  T
Q  632 aaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatc-aatttgattctttaagcatatatgtgcagaaca 730  Q
    ||| |||||||| |||||| | ||||||||  | | ||||||| |||||| ||| |||||||| || || ||||| |||   |||||||| ||||||| |    
T  23965894 aaatcgatccctgaattatttcaaaaaaccgtc-acataagtccttgaatgataaaaacatatttccaagttgatccttggtgcatatatttgcagaaaa 23965796  T
Q  731 --aagtaaaaaagtcagaaaacgcaactttatccttgaaaataccatcaaataagtcataagtcttaactatgaaatattgcatagggcaaaaacaaccc 828  Q
      || ||||||   || || || |||||| ||||||||||||||||| |||||||||||| |||||||   ||||||||| |||| ||||||| ||||||    
T  23965795 tgaattaaaaataacaaaacacacaacttcatccttgaaaataccattaaataagtcatatgtcttaaggttgaaatattacata-ggcaaaagcaaccc 23965697  T
Q  829 aactatgg 836  Q
    ||||||||    
T  23965696 aactatgg 23965689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 44596033 - 44596111
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaata 175  Q
    |||||||||||| ||||||| |||||| | ||| |||||||| ||||||| ||||||||| ||||||||||||||||||    
T  44596033 gagtagtgatatttgtataattctttggtacaaattttatgacaactttggttttctctcatttgattggtcaaaaata 44596111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 27330916 - 27330996
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||||||| ||||||||| | ||||||| ||||||| ||| ||||| | ||||| |||||||||||||||||    
T  27330916 gagtagtgatatatgtacaactctttggtacaactttcatgataattttaattttttatctttagattggtcaaaaataat 27330996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 233 - 285
Target Start/End: Original strand, 27331054 - 27331106
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttttttaa 285  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  27331054 ttgtcaaaaaattgttagaaaatagttatacaaatatcatttctcttatttaa 27331106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 509 - 595
Target Start/End: Complemental strand, 34785039 - 34784951
Alignment:
Q  509 catgtcagatgccacataa-cagggactaatttggccgatggcaaccaaaattttcaaggacgaaattgattga-ttgcataaaatgtt 595  Q
    ||||||||||||||||||| || ||||||||||||| ||| |  |||||||||||||||||| ||||||||||| ||||| ||||||||    
T  34785039 catgtcagatgccacataagcaaggactaatttggctgatagtgaccaaaattttcaaggacaaaattgattgatttgcagaaaatgtt 34784951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 279
Target Start/End: Complemental strand, 42276132 - 42276089
Alignment:
Q  236 tcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  42276132 tcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 42276089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 628 - 742
Target Start/End: Complemental strand, 13035731 - 13035618
Alignment:
Q  628 tatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaatttgattctttaagcatatatgtgcaga 727  Q
    ||||||| ||||||||| ||||||| |||| |||  | ||||||||| ||||||||| |||||| || ||||| |||| |||   ||||||||||||| |    
T  13035731 tatcaaatcgatccctacattatataaaaataccatc-aaataagtccttgaattatttaaacagatgtcaatgtgatccttggtgcatatatgtgcaaa 13035633  T
Q  728 acaaagtaaaaaagt 742  Q
    |||||||||||||||    
T  13035632 acaaagtaaaaaagt 13035618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 693 - 747
Target Start/End: Complemental strand, 19710657 - 19710603
Alignment:
Q  693 atatcaatttgattctttaagcatatatgtgcagaacaaagtaaaaaagtcagaa 747  Q
    ||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||    
T  19710657 atatcaatttgatccttaaagcatatatgtgcagaacaacgtaaaaaagtcagaa 19710603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 623 - 705
Target Start/End: Original strand, 34784792 - 34784873
Alignment:
Q  623 ctaactatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaatttgat 705  Q
    |||||||||||| ||||||||  ||||||||||||||||  | ||||||||| |||||||||||||||| | |||||||||||    
T  34784792 ctaactatcaaatcgatccctccattatattaaaaaaccatc-aaataagtccttgaattatataaacagaaatcaatttgat 34784873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 803 - 968
Target Start/End: Complemental strand, 367383 - 367223
Alignment:
Q  803 aatattgcatagggcaaaaacaacccaactatggagcctaattcaaacaagtctgaatattacattttc-aaaagcatattttaaatacgttttcatcaa 901  Q
    |||||| ||||||  ||||  |||||||| ||||  | ||||| |||||||||| |||||||||||||| ||||| ||| |||||  | ||    |||||    
T  367383 aatattacataggcaaaaagaaacccaaccatgggacataatttaaacaagtctaaatattacattttccaaaagtataatttaatcaggt----atcaa 367288  T
Q  902 gcatcacttctttgaaaatctgggggttggggataaactccatgaatttaggattgagtcgaaccgg 968  Q
     ||||||||||||| |||||| |||||| | ||||||||||||||| |||||||||||| |||||||    
T  367287 acatcacttctttggaaatcttggggtt-gagataaactccatgaa-ttaggattgagtagaaccgg 367223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 33212086 - 33212042
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  33212086 ttgtcaaaaaattgttagaaaatggttgtacaaatatcatttctc 33212042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 509 - 595
Target Start/End: Original strand, 34784203 - 34784291
Alignment:
Q  509 catgtcagatgccacataa-cagggactaatttggccgatggcaaccaaaattttcaaggacgaaattgattga-ttgcataaaatgtt 595  Q
    ||||||| ||||||||||| |||||||||||||| | ||| |  |||||||||| ||||||||||||||||||| ||||| ||||||||    
T  34784203 catgtcatatgccacataagcagggactaatttgactgatagtgaccaaaatttccaaggacgaaattgattgatttgcagaaaatgtt 34784291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 824 - 968
Target Start/End: Complemental strand, 6058000 - 6057862
Alignment:
Q  824 aacccaactatggagcctaattcaaacaagtctgaatattacattttcaaaagcatattttaaatacgttttcatcaagcatcacttctttgaaaatctg 923  Q
    ||||||||||||| || ||||| |||||||||  ||||||||| || |||||||||| |||||| | ||    |||||| |||||||||||| ||| | |    
T  6058000 aacccaactatggggcataatttaaacaagtcgaaatattacagttccaaaagcataatttaaacatgt----atcaagtatcacttctttggaaagccg 6057905  T
Q  924 ggggttggggataaactccatgaatttaggattgagtcgaaccgg 968  Q
     ||||| |||||||||||||| || ||||| |||||| |||||||    
T  6057904 agggtt-gggataaactccataaacttagg-ttgagttgaaccgg 6057862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 346 - 404
Target Start/End: Original strand, 6056777 - 6056835
Alignment:
Q  346 caaattcgttcttgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatg 404  Q
    ||||||||| | |||||||||||||||||||||||||  ||||| ||||||||||||||    
T  6056777 caaattcgtccctgaatttgcacgaatcggacaaaaacgtcctccaatttatcgaaatg 6056835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 23848252 - 23848178
Alignment:
Q  103 tgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||| | |||||||||||  |||||||||||||| |||||||||||||  |||||||| | |||||||||    
T  23848252 tgatatatggacaactctttgatataacttttatgataattttgattttctcttatttgattgataaaaaataat 23848178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 669 - 742
Target Start/End: Complemental strand, 7402768 - 7402695
Alignment:
Q  669 taagtctttgaattatataaacatatatcaatttgattctttaagcatatatgtgcagaacaaagtaaaaaagt 742  Q
    |||||| ||||||||| ||||||||| ||||| |||| | ||  ||||||||||||| ||||||||||||||||    
T  7402768 taagtccttgaattatttaaacatatgtcaatgtgatcccttttgcatatatgtgcaaaacaaagtaaaaaagt 7402695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 42640887 - 42640846
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcattt 274  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  42640887 ttgtcaaaaagttgttagaaaatagttgtacaaatatcattt 42640846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 40077298 - 40077250
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    ||||| ||||||||||| ||||||||||||||||||| |||||||||||    
T  40077298 ttgtctaaaaattgttacaaaatagttgtacaaatataatttctctttt 40077250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 623 - 742
Target Start/End: Complemental strand, 367684 - 367566
Alignment:
Q  623 ctaactatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaatttgattctttaagcatatatgt 722  Q
    |||| ||||||| ||||||||| ||||||| |||| |||  | ||||||||| ||||||||| |||||| || ||||| ||||  ||   ||||||||||    
T  367684 ctaagtatcaaatcgatccctacattatataaaaataccatc-aaataagtccttgaattatttaaacaaatgtcaatgtgatcattggcgcatatatgt 367586  T
Q  723 gcagaacaaagtaaaaaagt 742  Q
     ||||| |||||||||||||    
T  367585 acagaataaagtaaaaaagt 367566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 46829517 - 46829474
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctcttttt 282  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||    
T  46829517 aaaaattgttacaaaatggttgtacaaatatcatttctcttttt 46829474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 9055311 - 9055265
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    |||||||||| |||||||||| | |||||||||||||||||||||||    
T  9055311 ttgtcaaaaagttgttagaaattggttgtacaaatatcatttctctt 9055265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 173
Target Start/End: Complemental strand, 17157285 - 17157239
Alignment:
Q  127 caacttttatgataactttgattttctctcttttgattggtcaaaaa 173  Q
    |||||||  ||||||||||| ||||||||||||||||||||||||||    
T  17157285 caactttggtgataactttgcttttctctcttttgattggtcaaaaa 17157239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 36920847 - 36920798
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttttt 283  Q
    ||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  36920847 ttgtcaaaaaattgtta-aaaatggtagtacaaatatcatttctctttttt 36920798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 38096466 - 38096516
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttttt 283  Q
    ||||||||||||||| | ||||| ||||||||||||| |||||||||||||    
T  38096466 ttgtcaaaaaattgtcacaaaatggttgtacaaatattatttctctttttt 38096516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 277
Target Start/End: Original strand, 42598241 - 42598279
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  42598241 aaaaattgttaaaaaatagttgtacaaatatcatttctc 42598279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 358 - 404
Target Start/End: Complemental strand, 46868035 - 46867989
Alignment:
Q  358 tgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatg 404  Q
    |||||||||||||||||||||||||  ||||| ||||||||||||||    
T  46868035 tgaatttgcacgaatcggacaaaaacgtcctccaatttatcgaaatg 46867989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 6822554 - 6822595
Alignment:
Q  238 aaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    ||||| |||||||||||| |||||||||||||||||||||||    
T  6822554 aaaaagttgttagaaaatggttgtacaaatatcatttctctt 6822595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 25940659 - 25940704
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||| ||||||||||| ||||| ||||||||||||||||||||||    
T  25940659 ttgtctaaaaattgttacaaaatggttgtacaaatatcatttctct 25940704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 239 - 276
Target Start/End: Original strand, 44496836 - 44496873
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttct 276  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  44496836 aaaaattgttagaaaatagttatacaaatatcatttct 44496873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 173
Target Start/End: Complemental strand, 17500879 - 17500803
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaa 173  Q
    ||||||||||||||||| |||  ||||   ||||||| ||||||||||| |||||||||||| | ||||||| ||||    
T  17500879 gagtagtgatatatgtacaaccatttgggacaactttgatgataactttcattttctctcttcttattggtccaaaa 17500803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 173
Target Start/End: Original strand, 17552335 - 17552411
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaa 173  Q
    ||||||||||||||||| |||  ||||   ||||||| ||||||||||| |||||||||||| | ||||||| ||||    
T  17552335 gagtagtgatatatgtacaaccatttgggacaactttgatgataactttcattttctctcttcttattggtccaaaa 17552411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 21037261 - 21037305
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||||||||| |||||||||| || ||||||||||||||||||||    
T  21037261 ttgtcaaaaagttgttagaaattaattgtacaaatatcatttctc 21037305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 28824547 - 28824499
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    |||||||||| |||| ||||| | |||||||||||||||||||||||||    
T  28824547 ttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttctctttt 28824499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 279
Target Start/End: Original strand, 35823008 - 35823048
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  35823008 aaaaattgttagaaaatggatgtacaaatatcatttctctt 35823048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 40212516 - 40212560
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||    
T  40212516 ttgtcaaaaaattgttagaaagtggttgtacaaatattatttctc 40212560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 42476572 - 42476616
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||| ||||||||||||||||  |||||||||||||||||||||    
T  42476572 ttgtccaaaaattgttagaaaaatgttgtacaaatatcatttctc 42476616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 43213356 - 43213316
Alignment:
Q  240 aaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    |||||||||||||| | ||||||||||||||||||||||||    
T  43213356 aaaattgttagaaagtggttgtacaaatatcatttctcttt 43213316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 279
Target Start/End: Complemental strand, 2005773 - 2005730
Alignment:
Q  236 tcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    |||||||||||||| ||||  |||||||||||||||||||||||    
T  2005773 tcaaaaaattgttataaaagggttgtacaaatatcatttctctt 2005730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 276
Target Start/End: Original strand, 2756956 - 2756999
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttct 276  Q
    |||||||||| |||||||||| | ||||||||||||||||||||    
T  2756956 ttgtcaaaaagttgttagaaattggttgtacaaatatcatttct 2756999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 276
Target Start/End: Complemental strand, 2790221 - 2790178
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttct 276  Q
    ||||||||||||||||| ||| | ||||||||||||||||||||    
T  2790221 ttgtcaaaaaattgttacaaagtggttgtacaaatatcatttct 2790178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 12142069 - 12141990
Alignment:
Q  94 aatgagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaa 173  Q
    ||||||||||||||| || | |||  |||||| |||||||| ||| ||||||  |||||| |||||| ||||||||||||    
T  12142069 aatgagtagtgatatttgaacaaccatttgatacaacttttgtgacaactttttttttctttcttttcattggtcaaaaa 12141990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 509 - 583
Target Start/End: Complemental strand, 36756810 - 36756735
Alignment:
Q  509 catgtcagatgccacata-acagggactaatttggccgatggcaaccaaaattttcaaggacgaaattgattgatt 583  Q
    ||||||||| |||||||| |||||||||||||||||||||   ||| || ||||  |||||| |||||||||||||    
T  36756810 catgtcagacgccacatagacagggactaatttggccgataataacaaacatttcgaaggactaaattgattgatt 36756735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 509 - 583
Target Start/End: Complemental strand, 36762607 - 36762532
Alignment:
Q  509 catgtcagatgccacata-acagggactaatttggccgatggcaaccaaaattttcaaggacgaaattgattgatt 583  Q
    ||||||||| |||||||| |||||||||||||||||||||   ||| || ||||  |||||| |||||||||||||    
T  36762607 catgtcagacgccacatagacagggactaatttggccgataataacaaacatttcgaaggactaaattgattgatt 36762532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 509 - 583
Target Start/End: Complemental strand, 36766334 - 36766259
Alignment:
Q  509 catgtcagatgccacata-acagggactaatttggccgatggcaaccaaaattttcaaggacgaaattgattgatt 583  Q
    ||||||||| |||||||| |||||||||||||||||||||   ||| || ||||  |||||| |||||||||||||    
T  36766334 catgtcagacgccacatagacagggactaatttggccgataataacaaacatttcgaaggactaaattgattgatt 36766259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 19426624 - 19426574
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttttt 283  Q
    |||||||||| |||| | ||||| |||||||||||||||||||||| ||||    
T  19426624 ttgtcaaaaagttgtcacaaaatggttgtacaaatatcatttctctatttt 19426574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 275
Target Start/End: Complemental strand, 21153094 - 21153052
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttc 275  Q
    ||||||||||||| |||||||||  ||||||||||||||||||    
T  21153094 ttgtcaaaaaattattagaaaatgattgtacaaatatcatttc 21153052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 251 - 281
Target Start/End: Complemental strand, 27704461 - 27704431
Alignment:
Q  251 aaaatagttgtacaaatatcatttctctttt 281  Q
    |||||||||||||||||||||||||||||||    
T  27704461 aaaatagttgtacaaatatcatttctctttt 27704431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 30769688 - 30769731
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||    
T  30769688 ttgtcaaaaagttgtta--aaatagttgtacaaatatcatttctct 30769731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 41966376 - 41966330
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    ||||||||||||||| | ||| | |||||||||||||||||||||||    
T  41966376 ttgtcaaaaaattgtcacaaagtggttgtacaaatatcatttctctt 41966330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 666 - 747
Target Start/End: Complemental strand, 2168095 - 2168014
Alignment:
Q  666 aaataagtctttgaattatataaacatatatcaatttgattctttaagcatatatgtgcagaacaaagtaaaaaagtcagaa 747  Q
    |||||||||  |||||| | ||| || ||||||| ||||| ||| |||||||||||| || ||  |||||||||||||||||    
T  2168095 aaataagtccctgaattgtttaatcagatatcaaattgatccttgaagcatatatgtacaaaattaagtaaaaaagtcagaa 2168014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 244 - 281
Target Start/End: Original strand, 19510384 - 19510421
Alignment:
Q  244 ttgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  19510384 ttgtgagaaaataattgtacaaatatcatttctctttt 19510421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 251 - 280
Target Start/End: Original strand, 23389638 - 23389667
Alignment:
Q  251 aaaatagttgtacaaatatcatttctcttt 280  Q
    ||||||||||||||||||||||||||||||    
T  23389638 aaaatagttgtacaaatatcatttctcttt 23389667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 27075514 - 27075469
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||||||||| ||||| ||||| ||| ||||||||||||||||||    
T  27075514 ttgtcaaaaaactgttaaaaaatggttatacaaatatcatttctct 27075469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 27202797 - 27202842
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||||||||| ||||| ||||| ||| ||||||||||||||||||    
T  27202797 ttgtcaaaaaactgttaaaaaatggttatacaaatatcatttctct 27202842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 34304705 - 34304746
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcattt 274  Q
    ||||| ||||||||| | ||||||||||||||||||||||||    
T  34304705 ttgtctaaaaattgtcaaaaaatagttgtacaaatatcattt 34304746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 244 - 281
Target Start/End: Original strand, 39497340 - 39497377
Alignment:
Q  244 ttgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    |||||| ||||| |||||||||||||||||||||||||    
T  39497340 ttgttaaaaaatggttgtacaaatatcatttctctttt 39497377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 40693555 - 40693600
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||| |||| |||| | ||||||||||||||||||||||||||||    
T  40693555 ttgtctaaaagttgtcaaaaaatagttgtacaaatatcatttctct 40693600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 244 - 281
Target Start/End: Original strand, 41590558 - 41590595
Alignment:
Q  244 ttgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    |||||| ||||| |||||||||||||||||||||||||    
T  41590558 ttgttataaaatggttgtacaaatatcatttctctttt 41590595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 47012603 - 47012644
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    ||||||| |||||||||  |||||||||||||||||||||||    
T  47012603 aaaaattattagaaaatgattgtacaaatatcatttctcttt 47012644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 282
Target Start/End: Original strand, 47905143 - 47905192
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttttt 282  Q
    ||||| ||| ||||| | ||||| ||||||||||||||||||||||||||    
T  47905143 ttgtctaaatattgtcaaaaaatggttgtacaaatatcatttctcttttt 47905192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 167; Significance: 6e-89; HSPs: 83)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 167; E-Value: 6e-89
Query Start/End: Original strand, 487 - 815
Target Start/End: Complemental strand, 40099212 - 40098883
Alignment:
Q  487 gttaacttctcacatgagttgtcatgtcagatgccacataa-cagggactaatttggccgatggcaaccaaaattttcaaggacgaaattgattgattgc 585  Q
    |||||| ||||||||| |||||||||||||||||||||||| |||||||||| |||| |||| |  || ||||||| ||||||| ||||||||||||| |    
T  40099212 gttaacctctcacatgggttgtcatgtcagatgccacataagcagggactaaattggtcgatagtgacaaaaatttccaaggacaaaattgattgattac 40099113  T
Q  586 ataaaatgttatgcaatttaatctctgttatgtttgactaactatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattata 685  Q
    | |||||||||||||||||| || ||||||| ||||||| |||||||||  |||||||||||||||||||||||||  | |||||| || ||||||||||    
T  40099112 agaaaatgttatgcaatttagtccctgttatttttgacttactatcaaattgatccctaaattatattaaaaaaccgtc-aaataaatccttgaattata 40099014  T
Q  686 taaacatatatc-aatttgattctttaagcatatatgtgcagaacaaagtaaaaaagtcagaaaacgcaactttatccttgaaaataccatcaaataagt 784  Q
    || ||||||||| ||||||| |||| || | ||||| |||||||||||||||||||| ||||| || |||||| ||||||||||||| ||||||||||||    
T  40099013 tagacatatatccaatttgaatcttgaatcgtatatttgcagaacaaagtaaaaaagacagaatacacaacttcatccttgaaaatatcatcaaataagt 40098914  T
Q  785 cataagtcttaactatgaaatattgcatagg 815  Q
    |||||||||||| ||||||||||| ||||||    
T  40098913 cataagtcttaagtatgaaatattacatagg 40098883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 145; E-Value: 8e-76
Query Start/End: Original strand, 418 - 835
Target Start/End: Original strand, 4415256 - 4415671
Alignment:
Q  418 tgaatttgtcatatatcaatcaaattagtccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcaga 517  Q
    |||||||||||||| |||||||||||||||||| ||| ||||||||| |||||||  ||| |||||||||||||| ||||||||| |||| |||||||||    
T  4415256 tgaatttgtcatatttcaatcaaattagtccctacgtccatttggggcgttaacggtgatgatgtggccgttaacctctcacatgggttgccatgtcaga 4415355  T
Q  518 tgccacataa-cagggactaatttggccgatggcaaccaaaattttcaaggacgaaattgattgattgcataaaatgttatgcaatttaatctctgttat 616  Q
    |||||||||| || ||||||| |||  | || |  || |||||||  |||||  ||||||||||||| || ||||| |||||||||  | |   |||||     
T  4415356 tgccacataagcaaggactaaattgatcaatagtgacaaaaatttcgaaggagaaaattgattgatttcaaaaaatattatgcaataaagttcttgttaa 4415455  T
Q  617 gtttgactaactatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaattt-gattctttaagca 715  Q
     ||| ||  ||||||||| |||||||||||||||||| |||||||  | ||||||||| |||||||||||||||||||||| |||| ||| ||| |||||    
T  4415456 tttttacatactatcaaatcgatccctaaattatattcaaaaaccgtc-aaataagtcattgaattatataaacatatatccattttgatccttgaagca 4415554  T
Q  716 tatatgtgcagaacaaagtaaaaaagtcagaaaacgcaactttatccttgaaaataccatcaaataagtcataagtcttaactatgaaatattgcatagg 815  Q
    ||||| |||||||||||||||||| | ||||| || |||||| ||||||||||||| ||| ||||||||||||  |||||| | ||||||||| | || |    
T  4415555 tatatttgcagaacaaagtaaaaatgacagaacacacaacttcatccttgaaaataacataaaataagtcata--tcttaagtttgaaatattacgta-g 4415651  T
Q  816 gcaaaaacaacccaactatg 835  Q
    |||||| |||||||||||||    
T  4415652 gcaaaagcaacccaactatg 4415671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 358 - 807
Target Start/End: Complemental strand, 14001560 - 14001112
Alignment:
Q  358 tgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatggctattttgtttatgaatttgtcatatatcaatcaaattagtccctccgttca 457  Q
    |||||||||| ||||| ||||||||  ||| | ||||||||||||||   | ||| |   | |||||||||||| |||||||| ||||| ||| ||| ||    
T  14001560 tgaatttgcatgaatcagacaaaaacgtcccccaatttatcgaaatgcacactttatccctaaatttgtcatatctcaatcaagttagttcctacgtcca 14001461  T
Q  458 tttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataa-cagggactaatttggccgatggcaaccaa 556  Q
    |||| ||||||||||  ||| | |||||||||||| ||||||||| |||  ||||||||||| ||||||| |||||||||| ||||  ||| |  ||  |    
T  14001460 tttgaggtgttaacggtgatgacgtggccgttaacctctcacatgggtttccatgtcagatgtcacataagcagggactaaattggttgatagtgac--a 14001363  T
Q  557 aattttcaaggacgaaattgattgattgcataaaatgttatgcaatttaatctctgttatgtttgactaactatcaaagcgatccctaaattatattaaa 656  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||  ||  |||||  ||| ||| ||||||||| | |||| | ||||||||||||    
T  14001362 aattttcaaggacgaaattgattgattgcaaaaaatgttgtgcaattttgtccttgttactttttacttactatcaaatcaatccttgaattatattaaa 14001263  T
Q  657 aaacccacgaaataagtctttgaattatataaacatatatc-aatttgattctttaagcatatatgtgcagaacaaagtaaaaaagtcagaaaacgcaac 755  Q
    || ||  | ||||||||| ||||||| |||||||||||||| |||||||| ||| |||||||||| ||||||| | ||| |||||| ||||| || ||||    
T  14001262 aacccgtc-aaataagtccttgaattttataaacatatatccaatttgatccttgaagcatatatttgcagaatagagtgaaaaagacagaatacacaac 14001164  T
Q  756 tttatccttgaaaataccatcaaataagtcataagtcttaactatgaaatat 807  Q
    || ||||||||||||||||| |||||||| ||||||||||| | ||||||||    
T  14001163 ttcatccttgaaaataccattaaataagttataagtcttaagtttgaaatat 14001112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 555 - 841
Target Start/End: Original strand, 62133 - 62422
Alignment:
Q  555 aaaattttcaaggacgaaattgattgattgcataaaatgttatgcaatttaatctctgttatgtttgactaactatcaaagcgatccctaaattatatta 654  Q
    |||||||  |||||||||||||||||||| || ||||| |||||||||  | || ||||||  ||| ||  | ||||||| ||||||||||||||||||     
T  62133 aaaatttcgaaggacgaaattgattgatttcagaaaatattatgcaataaagtccctgttaatttttacatattatcaaatcgatccctaaattatattt 62232  T
Q  655 aaaaacccacgaaataagtctttgaattatataaacatatatc-aatttgattctttaagcatatatgtgcagaacaaagtaaaaaagtcagaaaacgca 753  Q
    |||||||  | ||||||||| |  ||||| ||||||||||||| |||||||| ||| |||| ||||| |||||||||||||||||| | ||||| || ||    
T  62233 aaaaaccgtc-aaataagtcctctaattacataaacatatatccaatttgatccttgaagcgtatatttgcagaacaaagtaaaaatgacagaacacaca 62331  T
Q  754 actttatccttgaaaataccatcaaataagtcataagtcttaact----atgaaatattgcatagggcaaaaacaacccaactatggagcct 841  Q
    |||| ||||||||| |||  || |||||||||||| ||||||| |     ||||||||| ||||  ||||||||||||||||||||||||||    
T  62332 acttcatccttgaatataagattaaataagtcatatgtcttaagtttaattgaaatattacata-agcaaaaacaacccaactatggagcct 62422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 618 - 763
Target Start/End: Complemental strand, 363351 - 363208
Alignment:
Q  618 tttgactaactatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaatttgattctttaagcata 717  Q
    |||||||||||||||||  |||| ||| ||||||||||| |  |||  ||||||||| ||||||||| ||| || ||||||||||||  ||| |||||||    
T  363351 tttgactaactatcaaattgatctctatattatattaaaga--ccatcaaataagtccttgaattatttaatcagatatcaatttgacccttgaagcata 363254  T
Q  718 tatgtgcagaacaaagtaaaaaagtcagaaaacgcaactttatcct 763  Q
    ||||||||||||||| |||||||||||||| || |||||| |||||    
T  363253 tatgtgcagaacaaaataaaaaagtcagaagacacaacttgatcct 363208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 433 - 834
Target Start/End: Original strand, 32607277 - 32607682
Alignment:
Q  433 tcaatcaaattagtccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataa-cagg 531  Q
    |||||||||||||||||| ||| |||||| || |||||||  ||| | ||||| |||||| ||||| ||| |||| ||||| ||||||||||||| || |    
T  32607277 tcaatcaaattagtccctacgtccatttgaggcgttaacggtgatgacgtggctgttaacatctcagatgggttgccatgttagatgccacataagcaag 32607376  T
Q  532 gactaatttggccgatggcaaccaaaattttcaaggacgaaattgattgattgcataaaatgttatgcaatttaatctctgttatgtttgactaactatc 631  Q
    |||||| |||    ||    || |||| |||||||||||||||||||||||| || ||||| || |  |||  | || || |||  ||| |||  |||||    
T  32607377 gactaaattgatgtataatgacaaaaaatttcaaggacgaaattgattgatttcagaaaatattttctaatacagtccctattaatttttacttgctatc 32607476  T
Q  632 aaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacata-tatcaatttgattctttaagc--atatatgtgcag-- 726  Q
    |||  ||||||| |||||| | |||||| |  | ||||||||| |||||||||||||||||| | |||| ||||| ||| | ||  |||||| |||||      
T  32607477 aaattgatccctgaattatttcaaaaaaacgtc-aaataagtccttgaattatataaacatattttcaagttgatccttgatgcatatatatttgcagca 32607575  T
Q  727 aacaaagtaaaaaagtcagaaaacgcaactttatccttgaaaataccatcaaataagtcataagtcttaactatgaaatattgcatagggcaaaaacaac 826  Q
    ||| || |||||| | || || || |||||| ||||||||||||| ||| ||||||||| || ||||||| | ||||||||| |||| ||||||| ||||    
T  32607576 aacgaattaaaaatgacaaaacacacaacttcatccttgaaaatatcattaaataagtcgtatgtcttaagtttgaaatattacata-ggcaaaagcaac 32607674  T
Q  827 ccaactat 834  Q
    ||||||||    
T  32607675 ccaactat 32607682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 618 - 740
Target Start/End: Original strand, 40150916 - 40151037
Alignment:
Q  618 tttgactaactatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaatttgattctttaagcata 717  Q
    ||||||||||||||||| ||||||||| |||||||  |||||||  | ||||||||  ||||||||||||| || |||||||||||||  || | |||||    
T  40150916 tttgactaactatcaaatcgatccctacattatatgcaaaaaccatc-aaataagttcttgaattatataagcagatatcaatttgatctttgatgcata 40151014  T
Q  718 tatgtgcagaacaaagtaaaaaa 740  Q
    ||||| |||||||||||||||||    
T  40151015 tatgttcagaacaaagtaaaaaa 40151037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 346 - 836
Target Start/End: Original strand, 859988 - 860480
Alignment:
Q  346 caaattcgttcttgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatggctattttgtttatgaatttgtcatatatcaatcaaattag 445  Q
    ||||| ||||| |||||||  |||||||||| ||||| |||||  |||| |||||||||  |||||  |   |||||||  || |  ||||||||| |||    
T  859988 caaatccgttcctgaatttttacgaatcggataaaaacatccttcaattaatcgaaatgcatatttcatccctgaatttaacaaacgtcaatcaaaatag 860087  T
Q  446 tccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataa-cagggactaatttggcc 544  Q
    | | | ||| ||||||||  |||||||  ||| ||||||| ||| || | ||| ||| |||| ||||||||||||||||||| |||||| ||| |||       
T  860088 ttcatacgtccatttgggacgttaacggtgatgatgtggctgttcacatttcagatgggttgccatgtcagatgccacataagcagggagtaaattgatg 860187  T
Q  545 gatggcaaccaaaattttcaaggacgaaattgattgattgcataaaatgttatgcaatttaatctctgttatgtttgactaactatcaaagcgatcccta 644  Q
     ||     | |||| ||||||||| |||||||||||||| || ||||| || |  |||  | || || |||  ||| ||| ||||||||| |||||| ||    
T  860188 tatcatgccaaaaaatttcaaggatgaaattgattgatttcaaaaaatattttctaataaagtccctattaattttaacttactatcaaatcgatccata 860287  T
Q  645 aattatattaaaaaacccacgaaataagtctttgaattatataaacatatatc-aatttgattctttaagcatatatgtgcagaa--caaagtaaaaaag 741  Q
    |||||| | |||||||   | | ||||||| |||||||||| |||||||| || || |||||  ||   |||||||| |||||||  | || |||||| |    
T  860288 aattatttcaaaaaactgtc-agataagtccttgaattataaaaacatatttccaagttgatcattggtgcatatatttgcagaaagcgaattaaaaatg 860386  T
Q  742 tcagaaaacgcaactttatccttgaaaataccatcaaataagtcataagtcttaactatgaaatattgcatagggcaaaaacaacccaactatgg 836  Q
     || || || |||||| ||||||||||||||||| |||||||||||| |||||||   ||||||||| |||| ||||||| ||||||||||||||    
T  860387 acaaaacacacaacttcatccttgaaaataccattaaataagtcatatgtcttaaggttgaaatattacata-ggcaaaagcaacccaactatgg 860480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 666 - 834
Target Start/End: Original strand, 15806442 - 15806612
Alignment:
Q  666 aaataagtctttgaattatataaacatatatc-aatttgattctttaagcatatatgtgcag--aacaaagtaaaaaagtcagaaaacgcaactttatcc 762  Q
    ||||||||| ||||||||||||||||||| || || ||||| ||| | |||||||| |||||  ||| || |||||| | || || || |||||| ||||    
T  15806442 aaataagtccttgaattatataaacatatttccaagttgatccttgatgcatatatttgcagcaaacgaattaaaaatgacaaaacacacaacttcatcc 15806541  T
Q  763 ttgaaaataccatcaaataagtcataagtcttaactatgaaatattgcatagggcaaaaacaacccaactat 834  Q
    ||||||||| ||| ||||||||||||  ||| || | ||||||||| |||| |||||||||||| |||||||    
T  15806542 ttgaaaatatcattaaataagtcatatctctgaagtttgaaatattacata-ggcaaaaacaactcaactat 15806612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 666 - 834
Target Start/End: Complemental strand, 39282608 - 39282438
Alignment:
Q  666 aaataagtctttgaattatataaacatatat-caatttgattctttaagcatatatgtgcag--aacaaagtaaaaaagtcagaaaacgcaactttatcc 762  Q
    ||||||||| ||||||||||||||||||| | ||| ||||| ||| | |||||||| |||||  ||| || |||||| | || || || |||||| ||||    
T  39282608 aaataagtccttgaattatataaacatattttcaagttgatccttgatgcatatatttgcagcaaacgaattaaaaatgacaaaacacacaacttcatcc 39282509  T
Q  763 ttgaaaataccatcaaataagtcataagtcttaactatgaaatattgcatagggcaaaaacaacccaactat 834  Q
    ||||||||| ||| ||||||||||||  |||||| | ||||||||| |||| ||||||| |||| |||||||    
T  39282508 ttgaaaatatcattaaataagtcatatctcttaagtttgaaatattacata-ggcaaaagcaactcaactat 39282438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 4723744 - 4723670
Alignment:
Q  101 agtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaata 175  Q
    ||||||||||||| ||||||||| | |||||||||| | ||||||  ||||||||||||||||||||||||||||    
T  4723744 agtgatatatgtacaactctttggtacaacttttataacaactttagttttctctcttttgattggtcaaaaata 4723670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 481 - 594
Target Start/End: Complemental strand, 17948872 - 17948758
Alignment:
Q  481 gtggccgttaacttctcacatgagttgtcatgtcagatgccacataa-cagggactaatttggccgatggcaaccaaaattttcaaggacgaaattgatt 579  Q
    |||||||||||| |||||||||   |||||||||||| |||||| || ||||||||||| |||||||| | |||||| |||||||||||| || |||  |    
T  17948872 gtggccgttaacctctcacatggactgtcatgtcagacgccacacaagcagggactaatatggccgattgtaaccaacattttcaaggactaatttggct 17948773  T
Q  580 gattgcataaaatgt 594  Q
    ||||||| |||||||    
T  17948772 gattgcagaaaatgt 17948758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 358 - 527
Target Start/End: Original strand, 59860 - 60029
Alignment:
Q  358 tgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatggctattttgtttatgaatttgtcatatatcaatcaaattagtccctccgttca 457  Q
    |||||||||||||||| |||||||| ||||   |||| |||||||||     |||||   |||||||||||||| |||||||| ||||||||| ||| ||    
T  59860 tgaatttgcacgaatcagacaaaaacatccctcaattcatcgaaatgcacgctttgtccctgaatttgtcatatctcaatcaatttagtccctacgtcca 59959  T
Q  458 tttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataa 527  Q
    ||||||  |||| ||  ||| |  ||||  ||||| ||||||||| |||| |||||||||||||||||||    
T  59960 tttgggacgttaccggtgatgacatggctattaacctctcacatgggttgccatgtcagatgccacataa 60029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 802 - 951
Target Start/End: Complemental strand, 40098826 - 40098682
Alignment:
Q  802 aaatattgcatagggcaaaaacaacccaactatggagcctaattcaaacaagtctgaatattacattttcaaaagcatattttaaatacgttttcatcaa 901  Q
    ||||||| ||||||  ||||  |||||||||| || || ||||| |||||||||| |||||||||||| |||||||| | |||||| |    | ||||||    
T  40098826 aaatattacataggcaaaaagaaacccaactagggggcataatttaaacaagtctaaatattacatttccaaaagcacaatttaaaca----tacatcaa 40098731  T
Q  902 gcatcacttctttgaaaatctgggggttggggataaactccatgaattta 951  Q
     ||||||||||||| ||||||| ||| | |||||||||||||||| ||||    
T  40098730 acatcacttctttggaaatctgaggg-tcgggataaactccatgagttta 40098682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 618 - 738
Target Start/End: Complemental strand, 40152026 - 40151907
Alignment:
Q  618 tttgactaactatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaatttgattctttaagcata 717  Q
    ||||||||||||| ||| ||||||||| |||||||  |||||||  | ||||||||  |||||||||||||||| | |||||||||||  || | |||||    
T  40152026 tttgactaactattaaatcgatccctacattatatgcaaaaaccatc-aaataagttcttgaattatataaacagaaatcaatttgatcattgatgcata 40151928  T
Q  718 tatgtgcagaacaaagtaaaa 738  Q
    | ||| |||||||||||||||    
T  40151927 tgtgttcagaacaaagtaaaa 40151907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 43057552 - 43057632
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||| ||||||||||| | |||||||||  |||||| |||| ||||||  ||||||||||||||||||||||||||||||    
T  43057552 gagtactgatatatgtacacctctttgatataactttcatgacaactttagttttctctcttttgattggtcaaaaataat 43057632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 532 - 595
Target Start/End: Original strand, 11313039 - 11313103
Alignment:
Q  532 gactaatttggccgatggcaaccaaaattttcaaggacgaaattgattga-ttgcataaaatgtt 595  Q
    ||||||||||||||||   ||||||||||||||| ||||||||||||||| ||||||||||||||    
T  11313039 gactaatttggccgataataaccaaaattttcaaagacgaaattgattgatttgcataaaatgtt 11313103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 177
Target Start/End: Original strand, 41868255 - 41868338
Alignment:
Q  94 aatgagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||| || |||||| |||| ||||||||||| ||||||||| || ||||||| |||||||   ||||||||||||||||||||    
T  41868255 aatgaataatgatatttgtacaactctttgatacaacttttacgacaactttggttttctcatatttgattggtcaaaaataat 41868338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 19631430 - 19631389
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcattt 274  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  19631430 ttgtcaaaaaattgttacaaaatagttgtacaaatatcattt 19631389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 19828331 - 19828290
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcattt 274  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  19828331 ttgtcaaaaaattgttacaaaatagttgtacaaatatcattt 19828290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 44059584 - 44059503
Alignment:
Q  96 tgagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||| |||| |||| |||| | |||||| | ||| ||||||| |||||||||  |||||||||||||||||||    
T  44059584 tgagtagtgatatttgtacaactttttggtacaacttctgtgacaactttggttttctctcaattgattggtcaaaaataat 44059503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 1889191 - 1889143
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||||||    
T  1889191 ttgtcaaaaaattgtcagaaagtggttgtacaaatatcatttctctttt 1889143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 11980695 - 11980651
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||||||||| |||||||||||| |||||||||||||||||||||    
T  11980695 ttgtcaaaaagttgttagaaaatggttgtacaaatatcatttctc 11980651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 31635837 - 31635881
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||||||||| |||||||||||| |||||||||||||||||||||    
T  31635837 ttgtcaaaaagttgttagaaaatggttgtacaaatatcatttctc 31635881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 34372891 - 34372847
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||    
T  34372891 ttgtcaaaaaattgttagaaaataattgtagaaatatcatttctc 34372847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 13466102 - 13466149
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    |||| |||||||||||||||| | ||||||||||||||||||||||||    
T  13466102 ttgttaaaaaattgttagaaattggttgtacaaatatcatttctcttt 13466149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 346 - 404
Target Start/End: Original strand, 13999818 - 13999876
Alignment:
Q  346 caaattcgttcttgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatg 404  Q
    ||||||||| |||||||||||||||||| || |||||| || | |||||||||||||||    
T  13999818 caaattcgtccttgaatttgcacgaatcagataaaaatgtcttttaatttatcgaaatg 13999876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 14797677 - 14797723
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    |||||||||| |||||||||| | |||||||||||||||||||||||    
T  14797677 ttgtcaaaaagttgttagaaattggttgtacaaatatcatttctctt 14797723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 276
Target Start/End: Complemental strand, 17159605 - 17159567
Alignment:
Q  238 aaaaaattgttagaaaatagttgtacaaatatcatttct 276  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  17159605 aaaaaattgttaaaaaatagttgtacaaatatcatttct 17159567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 281
Target Start/End: Complemental strand, 18531639 - 18531597
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    ||||||||| | |||||||||||||||||||||||||||||||    
T  18531639 aaaaattgtcaaaaaatagttgtacaaatatcatttctctttt 18531597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 346 - 404
Target Start/End: Original strand, 25757392 - 25757450
Alignment:
Q  346 caaattcgttcttgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatg 404  Q
    ||||||||| | |||||||||||||||| ||||||||| ||| | ||||||||||||||    
T  25757392 caaattcgtccctgaatttgcacgaatcagacaaaaatgtcccccaatttatcgaaatg 25757450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 31635697 - 31635779
Alignment:
Q  95 atgagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    |||||||||||||| || | |||| |||| | ||||| ||  || ||||||||||||||||  ||||||||||||||||||||    
T  31635697 atgagtagtgatatttgaacaactttttggtacaactctttggacaactttgattttctcttctttgattggtcaaaaataat 31635779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 6336290 - 6336249
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    |||| |||||||||||| ||||||||||||||||||||||||    
T  6336290 aaaagttgttagaaaatggttgtacaaatatcatttctcttt 6336249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 14140364 - 14140417
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttttttaat 286  Q
    |||||||||| |||| | ||| ||||||||||||||||||||||||| ||||||    
T  14140364 ttgtcaaaaagttgtcacaaattagttgtacaaatatcatttctcttgtttaat 14140417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 16754440 - 16754395
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    |||||||||| |||||||||||| |||||| |||||||||||||||    
T  16754440 ttgtcaaaaagttgttagaaaattgttgtataaatatcatttctct 16754395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 236 - 277
Target Start/End: Complemental strand, 17917430 - 17917389
Alignment:
Q  236 tcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  17917430 tcaaaaaattgttaaaaaataattgtacaaatatcatttctc 17917389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 17917570 - 17917493
Alignment:
Q  98 agtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaata 175  Q
    |||||||||||||||| ||   |||||| ||| |||||| | ||||||| |||||| | |||||||||||||||||||    
T  17917570 agtagtgatatatgtacaatcttttgatacaatttttataacaactttggttttcttttttttgattggtcaaaaata 17917493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 244 - 285
Target Start/End: Complemental strand, 40700240 - 40700199
Alignment:
Q  244 ttgttagaaaatagttgtacaaatatcatttctcttttttaa 285  Q
    |||||| |||||||||||||||||| ||||||||||||||||    
T  40700240 ttgttataaaatagttgtacaaataccatttctcttttttaa 40700199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 666 - 742
Target Start/End: Complemental strand, 161289 - 161213
Alignment:
Q  666 aaataagtctttgaattatataaacatatatcaatttgattctttaagcatatatgtgcagaacaaagtaaaaaagt 742  Q
    ||||||||| ||||||||| |||||| || ||||  |||| |||   ||||||||||||| ||||||||||||||||    
T  161289 aaataagtccttgaattatttaaacagatgtcaacgtgatccttggtgcatatatgtgcataacaaagtaaaaaagt 161213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 418 - 569
Target Start/End: Complemental strand, 363699 - 363548
Alignment:
Q  418 tgaatttgtcatatatcaatcaaattagtccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcaga 517  Q
    |||||||||||||| |||| ||| |||||||| |||| || ||  | ||||||||  | | | ||| | |||||| ||| ||||  ||| ||||||||||    
T  363699 tgaatttgtcatatgtcaaccaatttagtccc-ccgtccaatttagttgttaacggtgctgacgtgactgttaacctcttacataggttttcatgtcaga 363601  T
Q  518 tgccacataa-cagggactaatttggccgatggcaaccaaaattttcaaggac 569  Q
    || |||| || || ||||||||||||||||| |  ||||||||||||||||||    
T  363600 tgtcacacaagcatggactaatttggccgatagtgaccaaaattttcaaggac 363548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 841 - 949
Target Start/End: Complemental strand, 4046931 - 4046827
Alignment:
Q  841 taattcaaacaagtctgaatattacattttc-aaaagcatattttaaatacgttttcatcaagcatcacttctttgaaaatctgggggttggggataaac 939  Q
    ||||| |||||||| | |||||||||||||| ||||||||| |||||  | |    |||||| ||||||||||||| |||||  |||||| |||||||||    
T  4046931 taatttaaacaagtataaatattacattttccaaaagcataatttaatcagg----catcaaacatcacttctttggaaatcctggggtt-gggataaac 4046837  T
Q  940 tccatgaatt 949  Q
    ||||||||||    
T  4046836 tccatgaatt 4046827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 10749706 - 10749754
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    ||||||||| ||||| | ||||| |||||||||||||||||||||||||    
T  10749706 ttgtcaaaagattgtcataaaatggttgtacaaatatcatttctctttt 10749754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 16051278 - 16051357
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    |||||||||||| |||| | || |||| | ||||| |||||| |||||| |||| |||| |||||||||||||||||||||    
T  16051278 gagtagtgatatttgtacatctttttggtacaactcttatgacaactttaattt-ctcttttttgattggtcaaaaataat 16051357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 278
Target Start/End: Complemental strand, 23045124 - 23045092
Alignment:
Q  246 gttagaaaatagttgtacaaatatcatttctct 278  Q
    |||||||||||||||||||||||||||||||||    
T  23045124 gttagaaaatagttgtacaaatatcatttctct 23045092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 618 - 789
Target Start/End: Original strand, 26581763 - 26581934
Alignment:
Q  618 tttgactaactatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaatttgattctttaagcata 717  Q
    |||| |||| ||||||| ||||||||| ||||||| |||| |||  | ||||||| | |||||||||  ||| | || ||||| |||  ||| | || ||    
T  26581763 tttgcctaagtatcaaatcgatccctacattatataaaaataccatc-aaataaggccttgaattattcaaatagatgtcaatgtgacccttgatgcgta 26581861  T
Q  718 tatgtgcagaacaaagtaaaaaa-gtcagaaaacgcaactttatccttgaaaataccatcaaataagtcataa 789  Q
    ||||||||||| ||||||||||| || |  | || ||| || ||||||||  |||||||||||||||||||||    
T  26581862 tatgtgcagaataaagtaaaaaaagtaaagagacacaatttgatccttgattataccatcaaataagtcataa 26581934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 173
Target Start/End: Original strand, 29192538 - 29192614
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaa 173  Q
    |||||||||||| |||| | ||||||  | |||||||||||| ||||||| ||||||||  | ||||||||||||||    
T  29192538 gagtagtgatatttgtacatctctttcttacaacttttatgacaactttgtttttctcttctatgattggtcaaaaa 29192614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 32688571 - 32688615
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||    
T  32688571 ttgtcaaaaaattgtcagaaagtggttgtacaaatatcatttctc 32688615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 33857261 - 33857217
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||||||||||||||||||   ||||||||||||||||||||    
T  33857261 ttgtcaaaaaattgttagaaaaagattgtacaaatatcatttctc 33857217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 285
Target Start/End: Complemental strand, 36133018 - 36132966
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttttttaa 285  Q
    |||||| |||||||| | ||| | |||||||||||||||||||||||||||||    
T  36133018 ttgtcacaaaattgtcacaaagtggttgtacaaatatcatttctcttttttaa 36132966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 896 - 947
Target Start/End: Original strand, 62516 - 62566
Alignment:
Q  896 catcaagcatcacttctttgaaaatctgggggttggggataaactccatgaa 947  Q
    ||||||| |||||||||||||||||| ||||||| | |||||||||||||||    
T  62516 catcaagtatcacttctttgaaaatccgggggtt-gtgataaactccatgaa 62566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 1876314 - 1876361
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    |||| |||||||||| | |||||||||||| |||||||||||||||||    
T  1876314 ttgtaaaaaaattgtgaaaaaatagttgtataaatatcatttctcttt 1876361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 4138212 - 4138247
Alignment:
Q  244 ttgttagaaaatagttgtacaaatatcatttctctt 279  Q
    |||||||||||||||| |||||||||||||||||||    
T  4138212 ttgttagaaaatagttatacaaatatcatttctctt 4138247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 278
Target Start/End: Complemental strand, 4319807 - 4319768
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||||| ||| ||||||||||||||||||||||||||||    
T  4319807 aaaaattattataaaatagttgtacaaatatcatttctct 4319768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 7498018 - 7498065
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    |||||||||| |||| | ||||| ||||||||||||||||||||||||    
T  7498018 ttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctcttt 7498065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 8352879 - 8352832
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    ||||| |||| || ||| ||||||||||||||||||||||||||||||    
T  8352879 ttgtctaaaagttattaaaaaatagttgtacaaatatcatttctcttt 8352832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 284
Target Start/End: Complemental strand, 10288194 - 10288143
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttttta 284  Q
    ||||| ||||||| | | |||||||||||||||||||||||||||| |||||    
T  10288194 ttgtctaaaaattatcacaaaatagttgtacaaatatcatttctctatttta 10288143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 278
Target Start/End: Complemental strand, 14871678 - 14871639
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||||||| ||||||| ||||||||||||||||||||||    
T  14871678 aaaaattgtaagaaaatggttgtacaaatatcatttctct 14871639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 177
Target Start/End: Complemental strand, 36795911 - 36795832
Alignment:
Q  98 agtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    |||| ||||||||||| |||| |||    ||||||| |||||| |||| ||||||||| |||| ||||||||||||||||    
T  36795911 agtaatgatatatgtacaactatttaggacaactttgatgatagctttcattttctctttttttattggtcaaaaataat 36795832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 284
Target Start/End: Original strand, 39737713 - 39737764
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttttta 284  Q
    ||||| |||| |||||||||| | ||||||||||||||||||||||| ||||    
T  39737713 ttgtccaaaagttgttagaaattggttgtacaaatatcatttctcttattta 39737764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 44484689 - 44484728
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||||||||| ||||| ||||||||||||||||||||||    
T  44484689 aaaaattgttacaaaatggttgtacaaatatcatttctct 44484728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 1052523 - 1052569
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    ||||| |||| |||||| ||||| |||||||||||||||||||||||    
T  1052523 ttgtctaaaagttgttaaaaaatggttgtacaaatatcatttctctt 1052569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 173
Target Start/End: Original strand, 6851586 - 6851624
Alignment:
Q  135 atgataactttgattttctctcttttgattggtcaaaaa 173  Q
    |||| ||||||| ||||||||||||||||||||||||||    
T  6851586 atgacaactttgtttttctctcttttgattggtcaaaaa 6851624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 238 - 284
Target Start/End: Complemental strand, 7667151 - 7667105
Alignment:
Q  238 aaaaaattgttagaaaatagttgtacaaatatcatttctctttttta 284  Q
    ||||||||||||||| ||| ||||| ||||||||||| |||||||||    
T  7667151 aaaaaattgttagaacataattgtataaatatcatttatctttttta 7667105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 433 - 527
Target Start/End: Original strand, 15806210 - 15806304
Alignment:
Q  433 tcaatcaaattagtccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataa 527  Q
    |||||||||||||||||| ||| ||||||||| |||||||  ||| | ||||  |||||| ||||| | | | || ||||||||| |||||||||    
T  15806210 tcaatcaaattagtccctacgtccatttggggcgttaacggtgatgacgtggttgttaacatctcagacgggatgccatgtcagacgccacataa 15806304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 173
Target Start/End: Original strand, 17267578 - 17267624
Alignment:
Q  127 caacttttatgataactttgattttctctcttttgattggtcaaaaa 173  Q
    |||||||||||||||| || ||||||||| |||| ||||||||||||    
T  17267578 caacttttatgataacattcattttctctatttttattggtcaaaaa 17267624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 239 - 277
Target Start/End: Original strand, 21738649 - 21738687
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  21738649 aaaaattattagaaaatggttgtacaaatatcatttctc 21738687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 358 - 404
Target Start/End: Original strand, 40097571 - 40097617
Alignment:
Q  358 tgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatg 404  Q
    |||||||||||||||||| ||||||| ||| | ||||||||||||||    
T  40097571 tgaatttgcacgaatcgggcaaaaatgtccccaaatttatcgaaatg 40097617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 43994040 - 43994086
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    ||||||||||||||| | ||||| ||||||||| |||||||||||||    
T  43994040 ttgtcaaaaaattgtcataaaatggttgtacaactatcatttctctt 43994086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 3585669 - 3585624
Alignment:
Q  234 tgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    ||||||||| |||||||||| | ||||| |||||||||||||||||    
T  3585669 tgtcaaaaagttgttagaaattggttgtgcaaatatcatttctctt 3585624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 3585778 - 3585733
Alignment:
Q  127 caacttttatgataactttgattttctctcttttgattggtcaaaa 172  Q
    |||||||||||| ||||||| |||||||| ||||||||| ||||||    
T  3585778 caacttttatgacaactttgtttttctctattttgattgatcaaaa 3585733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 282
Target Start/End: Original strand, 4738599 - 4738648
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttttt 282  Q
    |||||||||| |||| | ||| | ||||||||||||||||||||||||||    
T  4738599 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctcttttt 4738648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 6365230 - 6365185
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||||||||||||| | ||| | ||||||||||||||||||||||    
T  6365230 ttgtcaaaaaattgtcacaaagtggttgtacaaatatcatttctct 6365185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 11442716 - 11442671
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||||||||||||| |  |||| ||||||||||||||||||||||    
T  11442716 ttgtcaaaaaattgtaatgaaatggttgtacaaatatcatttctct 11442671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 276
Target Start/End: Complemental strand, 14876744 - 14876707
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttct 276  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  14876744 aaaaattgtaagaaaatggttgtacaaatatcatttct 14876707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 173
Target Start/End: Original strand, 30413664 - 30413697
Alignment:
Q  140 aactttgattttctctcttttgattggtcaaaaa 173  Q
    ||||||| ||||||||||||||||||||||||||    
T  30413664 aactttgcttttctctcttttgattggtcaaaaa 30413697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 896 - 953
Target Start/End: Original strand, 32607806 - 32607862
Alignment:
Q  896 catcaagcatcacttctttgaaaatctgggggttggggataaactccatgaatttagg 953  Q
    |||||||| ||||||||||| ||| |||| |||| ||||||||||||||||| |||||    
T  32607806 catcaagcttcacttctttggaaagctggaggtt-gggataaactccatgaacttagg 32607862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 36909731 - 36909808
Alignment:
Q  96 tgagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaa 173  Q
    ||||||||||||| |||| | |  ||| || ||||||| |||| ||||||| ||||||||||| | ||||||||||||    
T  36909731 tgagtagtgatatttgtacatccatttcatacaactttgatgacaactttgtttttctctcttcttattggtcaaaaa 36909808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 240 - 273
Target Start/End: Complemental strand, 37109311 - 37109278
Alignment:
Q  240 aaaattgttagaaaatagttgtacaaatatcatt 273  Q
    |||||||||| |||||||||||||||||||||||    
T  37109311 aaaattgttacaaaatagttgtacaaatatcatt 37109278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 896 - 953
Target Start/End: Complemental strand, 39282312 - 39282256
Alignment:
Q  896 catcaagcatcacttctttgaaaatctgggggttggggataaactccatgaatttagg 953  Q
    |||||||| ||||||||||| ||| | ||||||| ||||||||||||||||| |||||    
T  39282312 catcaagcttcacttctttggaaagccgggggtt-gggataaactccatgaacttagg 39282256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 39744513 - 39744558
Alignment:
Q  127 caacttttatgataactttgattttctctcttttgattggtcaaaa 172  Q
    ||||||| |||| ||||||| |||||||| ||||||||||||||||    
T  39744513 caactttcatgacaactttgtttttctctattttgattggtcaaaa 39744558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 345 - 386
Target Start/End: Complemental strand, 40099324 - 40099283
Alignment:
Q  345 tcaaattcgttcttgaatttgcacgaatcggacaaaaatatc 386  Q
    |||||||||| | |||||||||| ||||||||||||||||||    
T  40099324 tcaaattcgtccctgaatttgcatgaatcggacaaaaatatc 40099283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 40358145 - 40358186
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    ||||||| ||| |||||||||||| |||||||||||||||||    
T  40358145 aaaaattattaaaaaatagttgtagaaatatcatttctcttt 40358186  T

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Target: chr2; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 43057670 - 43057707
Alignment:
Q  245 tgttagaaaatagttgtacaaatatcatttctcttttt 282  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  43057670 tgttaaaaaattgttgtacaaatatcatttctcttttt 43057707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 158; Significance: 1e-83; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 346 - 796
Target Start/End: Complemental strand, 43870394 - 43869942
Alignment:
Q  346 caaattcgttcttgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatggctattttgtttatgaatttgtcatatatcaatcaaattag 445  Q
    |||||||||  |||||||||||||||||||| |||||  ||||  ||||||||||||||   | ||| |   |||||||||||||| |||||||||||||    
T  43870394 caaattcgtcattgaatttgcacgaatcggataaaaacgtccttcaatttatcgaaatgcacactttatccctgaatttgtcatatctcaatcaaattag 43870295  T
Q  446 tccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataa-cagggactaatttggcc 544  Q
    ||| | ||| ||||||||| |||||||  ||| | |||||||||||| ||||||||| |||| ||||||||||| || |||| |||||||||| ||||      
T  43870294 tccttacgtccatttggggcgttaacggtgatgacgtggccgttaacctctcacatgggttgccatgtcagatgtcatataagcagggactaaattggtt 43870195  T
Q  545 gatggcaaccaaaattttcaaggacgaaattgattgattgcataaaa-tgttatgcaatttaatctctgttatgtttgactaactatcaaagcgatccct 643  Q
    ||| |  || ||||||| ||||||||||||||||||||| || |||| |||| ||||||||  || ||||||  ||| ||| ||||||||| |||||| |    
T  43870194 gatagtgacaaaaatttccaaggacgaaattgattgattccaaaaaaatgttgtgcaattttgtccctgttactttttacttactatcaaatcgatcctt 43870095  T
Q  644 aaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatc-aatttgattctttaagcatatatgtgcagaacaaagtaaaaaagt 742  Q
     |||||||||||||| ||  | ||||||||| ||||||| |||||||||||||| |||||||| ||| |||||||||| ||||||| | ||| ||||||     
T  43870094 gaattatattaaaaacccgtc-aaataagtccttgaattttataaacatatatccaatttgatccttgaagcatatatttgcagaagagagtgaaaaaga 43869996  T
Q  743 cagaaaacgcaactttatccttgaaaataccatcaaataagtcataagtcttaa 796  Q
    ||||| || |||||| ||||||||||||||||| ||||||||||||||||||||    
T  43869995 cagaacacacaacttcatccttgaaaataccattaaataagtcataagtcttaa 43869942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 433 - 834
Target Start/End: Complemental strand, 51546318 - 51545917
Alignment:
Q  433 tcaatcaaattagtccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataa-cagg 531  Q
    |||||||||||||||| | ||| ||||||||| |||||||  ||| | ||||| |||||| ||||| ||| |||| ||||||||||||||||||| ||||    
T  51546318 tcaatcaaattagtccatacgtccatttggggcgttaacggtgatgacgtggctgttaacatctcagatgggttgccatgtcagatgccacataagcagg 51546219  T
Q  532 gactaatttggccgatggcaaccaaaattttcaaggacgaaattgattgattgcataaaatgttatgcaatttaatctctgttatgtttgactaactatc 631  Q
    |||||| |||    ||    || |||| |||||||||||||||||||||||| || ||||| || |  |||  |||| || |||  ||| |||  |||||    
T  51546218 gactaaattgatgtataatgacaaaaaatttcaaggacgaaattgattgatttcagaaaatattttcaaatacaatccctattaatttttacttgctatc 51546119  T
Q  632 aaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaatttgattctttaagcatatatgtgcag--aac 729  Q
    |||  |||||||||||||| | |||||| |  | ||||||||| ||||||||||||||||| || ||| |||||  || | |||||||| |||||  |||    
T  51546118 aaattgatccctaaattatttcaaaaaaacatc-aaataagtccttgaattatataaacattta-caagttgatcattgatgcatatatttgcagcaaac 51546021  T
Q  730 aaagtaaaaaagtcagaaaacgcaactttatccttgaaaataccatcaaataagtcataagtcttaactatgaaatattgcatagggcaaaaacaaccca 829  Q
     || |||||| | || || ||||||||| ||||||||||||| ||| |||||| ||||| ||||||| | ||||||||| |||| ||||||| |||||||    
T  51546020 gaattaaaaatgacaaaacacgcaacttcatccttgaaaatatcattaaataaatcatatgtcttaagtttgaaatattacata-ggcaaaagcaaccca 51545922  T
Q  830 actat 834  Q
    |||||    
T  51545921 actat 51545917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 666 - 787
Target Start/End: Original strand, 42559119 - 42559240
Alignment:
Q  666 aaataagtctttgaattatataaacatatatcaatttgattctttaagcatatatgtgcagaacaaagtaaaaaagtcagaaaacgcaactttatccttg 765  Q
    ||||||||| ||||||||| ||||||||| ||||| |||| ||| | |||||||||| || || ||||||||||||| |  | || ||| || |||||||    
T  42559119 aaataagtccttgaattatttaaacatatgtcaatgtgatccttgatgcatatatgttcataaaaaagtaaaaaagtaaagagacacaatttgatccttg 42559218  T
Q  766 aaaataccatcaaataagtcat 787  Q
    ||||||||||||||||||||||    
T  42559219 aaaataccatcaaataagtcat 42559240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 10302232 - 10302312
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||| ||||| ||| | ||||||||| | ||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  10302232 gagtattgataaatggacaactctttggtacaactttcatgataactttgattttctctcttttgattggtaaaaaataat 10302312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 618 - 785
Target Start/End: Original strand, 3370302 - 3370468
Alignment:
Q  618 tttgactaactatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaatttgattctttaagcata 717  Q
    |||| |||| ||||||| || |||||| ||||||| |||| |||  | ||||||||||||||||||| |||||| || ||||| |||| |||   |||||    
T  3370302 tttgcctaagtatcaaatcgttccctacattatataaaaataccatc-aaataagtctttgaattatttaaacagatgtcaatgtgatccttggtgcata 3370400  T
Q  718 tatgtgcagaacaaagtaaaaaagtcagaaaacgcaactttatccttgaaaataccatcaaataagtc 785  Q
    |||||||| || ||||||||||||| |  | || ||| || ||||||||  |||||||||||||||||    
T  3370401 tatgtgcataataaagtaaaaaagtaaagagacacaatttgatccttgattataccatcaaataagtc 3370468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 45042305 - 45042259
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  45042305 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 45042259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 11570252 - 11570332
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||||||| ||||||||  | ||||||| |||| ||||||  | ||||||||||||||||||||||||||||    
T  11570252 gagtagtgatatatgtacaactctttcgtacaactttcatgacaacttttgtcttctctcttttgattggtcaaaaataat 11570332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 824 - 968
Target Start/End: Complemental strand, 23172697 - 23172559
Alignment:
Q  824 aacccaactatggagcctaattcaaacaagtctgaatattacattttcaaaagcatattttaaatacgttttcatcaagcatcacttctttgaaaatctg 923  Q
    |||||||||| || || ||||| |||||||||  |||||||||||| ||||| |||| |||||| | |    ||||||| |||||||||||||||||  |    
T  23172697 aacccaactagggggcataatttaaacaagtcgaaatattacatttccaaaatcataatttaaacatg----catcaagtatcacttctttgaaaattcg 23172602  T
Q  924 ggggttggggataaactccatgaatttaggattgagtcgaaccgg 968  Q
    |||||| ||||||||||||| ||| ||||| |||||||| |||||    
T  23172601 ggggtt-gggataaactccacgaacttagg-ttgagtcggaccgg 23172559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 15182610 - 15182660
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttttt 283  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  15182610 ttgtcaaaaagttgttagaaaatagttgtacaaatatcatttctttttttt 15182660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 177
Target Start/End: Original strand, 32811756 - 32811833
Alignment:
Q  100 tagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||| |||| ||||||||  | ||||||| |||| ||||||| ||||||||| ||||||||||||||||||||    
T  32811756 tagtgatatttgtacaactctttagtacaactttaatgacaactttggttttctctcatttgattggtcaaaaataat 32811833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 8670254 - 8670174
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    |||||||||||| |||| ||||||||  | | |  ||||||||||||||| |||||| |||||||||||||||||||||||    
T  8670254 gagtagtgatatttgtacaactcttttgtacgatctttatgataactttgtttttctatcttttgattggtcaaaaataat 8670174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 824 - 949
Target Start/End: Original strand, 42559362 - 42559481
Alignment:
Q  824 aacccaactatggagcctaattcaaacaagtctgaatattacattttcaaaagcatattttaaatacgttttcatcaagcatcacttctttgaaaatctg 923  Q
    |||||||||| ||||| ||||| |||||||||| ||||||||| ||||||||||||| |||||| |      |||||| ||| |||||||||||||||      
T  42559362 aacccaactagggagcataatttaaacaagtctaaatattaca-tttcaaaagcataatttaaaca----aacatcaaacattacttctttgaaaatcat 42559456  T
Q  924 ggggttggggataaactccatgaatt 949  Q
    |||||| |||||||||| ||||||||    
T  42559457 ggggtt-gggataaactacatgaatt 42559481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 177
Target Start/End: Complemental strand, 12708281 - 12708198
Alignment:
Q  94 aatgagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||||| |||| ||||||||  | |||| ||||||| || |||| |||| | |||||||||||||||||||||||    
T  12708281 aatgagtagtgatatttgtacaactcttttgtacaacctttatgacaattttgtttttatatcttttgattggtcaaaaataat 12708198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 177
Target Start/End: Complemental strand, 12717826 - 12717743
Alignment:
Q  94 aatgagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||||| |||| ||||||||  | |||| ||||||| || |||| |||| | |||||||||||||||||||||||    
T  12717826 aatgagtagtgatatttgtacaactcttttgtacaacctttatgacaattttgtttttatatcttttgattggtcaaaaataat 12717743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 418 - 583
Target Start/End: Original strand, 42558040 - 42558206
Alignment:
Q  418 tgaatttgtcatatatcaatcaaattagtccctccgttcatttggggtgttaacgacgataatgtgg-ccgttaacttctcacatgagttgtcatgtcag 516  Q
    ||||||||||| || |||||||| ||||||||| |||  | ||||||||||||||  | | |||||| |||||||| ||||||| |  |||||||||||     
T  42558040 tgaatttgtcaaatttcaatcaatttagtccctacgtcaagttggggtgttaacggtgctgatgtggaccgttaacctctcacaaggcttgtcatgtcaa 42558139  T
Q  517 atgccacataa-cagggactaatttggccgatggcaaccaaaattttcaaggacgaaattgattgatt 583  Q
    |||||||| || ||   ||||||||||||||  |  | |||||||  |||||||||||||||||||||    
T  42558140 atgccacacaagcataaactaatttggccgaaagtga-caaaattgccaaggacgaaattgattgatt 42558206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 176
Target Start/End: Complemental strand, 51849064 - 51848985
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataa 176  Q
    |||||||||| ||| || ||||||||| | |||| | ||||| ||||||||||||||||  |||||||||||||||||||    
T  51849064 gagtagtgatgtatatacaactctttggtacaacctctatgacaactttgattttctcttatttgattggtcaaaaataa 51848985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 52233248 - 52233295
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  52233248 ttgtcaaaaaattgtgagaaaatggttgtacaaatatcatttctcttt 52233295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 21728153 - 21728203
Alignment:
Q  127 caacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||| |||| |||||||||||| |||||||||||||||||||||||||    
T  21728153 caactttcatgacaactttgattttatctcttttgattggtcaaaaataat 21728203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 29632478 - 29632428
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttttt 283  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||||||    
T  29632478 ttgtcaaaaaattgttacaaaataaatgtacaaatatcatttctctttttt 29632428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 44671931 - 44672005
Alignment:
Q  103 tgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    |||||| |||| ||||||| | | |||||||||||||||||||  ||||||||  ||||||||||||||||||||    
T  44671931 tgatatttgtacaactcttcggtacaacttttatgataactttagttttctcttctttgattggtcaaaaataat 44672005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 18541078 - 18541123
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  18541078 ttgtcaaaaagttgttagaaaatggttgtacaaatatcatttctct 18541123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 12708134 - 12708086
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    |||||||||| |||||||||||| ||| |||||||||||||||||||||    
T  12708134 ttgtcaaaaagttgttagaaaatggttctacaaatatcatttctctttt 12708086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 12713588 - 12713540
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    |||||||||| |||||||||||| ||| |||||||||||||||||||||    
T  12713588 ttgtcaaaaagttgttagaaaatggttctacaaatatcatttctctttt 12713540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 12717679 - 12717631
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    |||||||||| |||||||||||| ||| |||||||||||||||||||||    
T  12717679 ttgtcaaaaagttgttagaaaatggttctacaaatatcatttctctttt 12717631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 30505363 - 30505407
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||||||||||||||||| | |||||||||||||||||||||    
T  30505363 ttgtcaaaaaattgttagaaattggttgtacaaatatcatttctc 30505407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 32811894 - 32811942
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    |||||||| ||||| |||||||| |||||||||||||||||||||||||    
T  32811894 ttgtcaaagaattgctagaaaattgttgtacaaatatcatttctctttt 32811942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 239 - 278
Target Start/End: Complemental strand, 1689429 - 1689390
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  1689429 aaaaattgttataaaatagttgtacaaatatcatttctct 1689390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 49596279 - 49596232
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    ||||||||||||||| | ||||| ||||||||||||||||||||||||    
T  49596279 ttgtcaaaaaattgtaataaaatggttgtacaaatatcatttctcttt 49596232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 173
Target Start/End: Original strand, 43196008 - 43196054
Alignment:
Q  127 caacttttatgataactttgattttctctcttttgattggtcaaaaa 173  Q
    |||||||  ||||||||||||| ||||||||||||||||||||||||    
T  43196008 caactttggtgataactttgatgttctctcttttgattggtcaaaaa 43196054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 358 - 404
Target Start/End: Original strand, 43868637 - 43868683
Alignment:
Q  358 tgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatg 404  Q
    ||||||||||||||||||| |||||  ||||||||||||||||||||    
T  43868637 tgaatttgcacgaatcggataaaaacgtcctctaatttatcgaaatg 43868683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 8905772 - 8905727
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    |||||||||  |||||| ||||||||||||||||||||||||||||    
T  8905772 ttgtcaaaaggttgttaaaaaatagttgtacaaatatcatttctct 8905727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 18540943 - 18541024
Alignment:
Q  96 tgagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||| || | |||| |||| | ||||| ||  || ||||||||||||||||  ||||||||||||||||||||    
T  18540943 tgagtagtgatatttgaacaactttttggtacaactctttggacaactttgattttctcttctttgattggtcaaaaataat 18541024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 282
Target Start/End: Complemental strand, 18610817 - 18610768
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttttt 282  Q
    |||| ||||| |||| | ||||||||||||||||||||||||||||||||    
T  18610817 ttgtaaaaaagttgtcacaaaatagttgtacaaatatcatttctcttttt 18610768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 20268540 - 20268581
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcattt 274  Q
    |||| |||||||||||| ||||||||||||||||||||||||    
T  20268540 ttgttaaaaaattgttataaaatagttgtacaaatatcattt 20268581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 27810274 - 27810319
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    |||||||||| |||||||||| | ||||||||||||||||||||||    
T  27810274 ttgtcaaaaagttgttagaaattggttgtacaaatatcatttctct 27810319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 36690599 - 36690644
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||||||||||||| ||||| | ||||||||||||||||||||||    
T  36690599 ttgtcaaaaaattgtgagaaattggttgtacaaatatcatttctct 36690644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 36706700 - 36706745
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||||||||||||| ||||| | ||||||||||||||||||||||    
T  36706700 ttgtcaaaaaattgtgagaaattggttgtacaaatatcatttctct 36706745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 39669850 - 39669805
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||||||||||||| | ||||| ||||||||||||||||||||||    
T  39669850 ttgtcaaaaaattgtcacaaaatggttgtacaaatatcatttctct 39669805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 279
Target Start/End: Original strand, 740989 - 741029
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    |||| ||||||||||||||||||| ||||||||||||||||    
T  740989 aaaagttgttagaaaatagttgtataaatatcatttctctt 741029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 3606121 - 3606165
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||||||||| |||||||||| | |||||||||||||||||||||    
T  3606121 ttgtcaaaaagttgttagaaattggttgtacaaatatcatttctc 3606165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 8464402 - 8464482
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||||||| |||   |||   ||||||| |||| |||||| |||||||||||||| ||||||| ||||||||    
T  8464402 gagtagtgatatatgtacaaccacttgggccaactttgatgacaactttcattttctctctttttattggtccaaaataat 8464482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 173
Target Start/End: Original strand, 15182472 - 15182548
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaa 173  Q
    |||||||||||| |||| | ||||||  ||||||||| |||| ||||||  ||||||||| | ||||||||||||||    
T  15182472 gagtagtgatatttgtacatctctttctttcaactttcatgacaactttatttttctctcctatgattggtcaaaaa 15182548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 279
Target Start/End: Complemental strand, 30973590 - 30973550
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  30973590 aaaaattgttagaaaagggttgtacaaatatcatttctctt 30973550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 42616039 - 42615959
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||| |||||| |||| ||||||||  || ||  ||||||| ||||||| |||||| | |||||||||||||||||||||    
T  42616039 gagtaatgatatttgtacaactcttttgtttaatatttatgacaactttgtttttctattttttgattggtcaaaaataat 42615959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 283
Target Start/End: Complemental strand, 46281474 - 46281430
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctctttttt 283  Q
    ||||||| ||| ||||||||||||||||||||||||||| |||||    
T  46281474 aaaaattattacaaaatagttgtacaaatatcatttctcattttt 46281430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 50141962 - 50142006
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||||||||| |||| |||||||||||| ||||||||||||||||    
T  50141962 ttgtcaaaaagttgtgagaaaatagttgaacaaatatcatttctc 50142006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 50242361 - 50242321
Alignment:
Q  240 aaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    |||||| ||||||||||||||||||||||| ||||||||||    
T  50242361 aaaattattagaaaatagttgtacaaatattatttctcttt 50242321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 51848924 - 51848876
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    |||||||||| |||||||||||| ||||||||||||||| || ||||||    
T  51848924 ttgtcaaaaagttgttagaaaatggttgtacaaatatcagttatctttt 51848876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 173
Target Start/End: Complemental strand, 52417713 - 52417637
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaa 173  Q
    |||||||||||||| || |||| ||||   ||||||| ||||||||||| |||||||||||| | ||||||| ||||    
T  52417713 gagtagtgatatatatacaactatttggaacaactttgatgataactttcattttctctcttcttattggtccaaaa 52417637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 276
Target Start/End: Original strand, 1788371 - 1788414
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttct 276  Q
    |||||||||||||||||| |||| |||||||| |||||||||||    
T  1788371 ttgtcaaaaaattgttagtaaatggttgtacacatatcatttct 1788414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 8934623 - 8934670
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    |||||||||| |||| | ||||||||||||||||||| ||||||||||    
T  8934623 ttgtcaaaaagttgtcacaaaatagttgtacaaatataatttctcttt 8934670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 12999855 - 12999894
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  12999855 aaaagttgttagaaaatggttgtacaaatatcatttctct 12999894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 16263463 - 16263420
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctcttttt 282  Q
    |||| ||||||||||||| |||||||||||||||||||| ||||    
T  16263463 aaaagttgttagaaaataattgtacaaatatcatttctcatttt 16263420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 950364 - 950414
Alignment:
Q  127 caacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    |||||||||||  || |||| |||||| |||||||||||||||||||||||    
T  950364 caacttttatgccaattttgtttttctttcttttgattggtcaaaaataat 950414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 239 - 277
Target Start/End: Complemental strand, 7648288 - 7648250
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  7648288 aaaaattgttacaaaataattgtacaaatatcatttctc 7648250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 239 - 277
Target Start/End: Original strand, 12306167 - 12306205
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  12306167 aaaaattgttataaaataattgtacaaatatcatttctc 12306205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 16987491 - 16987445
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    ||||| |||| |||||| |||||| ||||||||||||||||||||||    
T  16987491 ttgtctaaaagttgttaaaaaataattgtacaaatatcatttctctt 16987445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 239 - 277
Target Start/End: Complemental strand, 33076157 - 33076119
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  33076157 aaaagttgttagaaaatggttgtacaaatatcatttctc 33076119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 239 - 281
Target Start/End: Complemental strand, 35848450 - 35848408
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    ||||||| | ||||||| |||||||||||||||||||||||||    
T  35848450 aaaaattataagaaaatggttgtacaaatatcatttctctttt 35848408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 239 - 273
Target Start/End: Complemental strand, 36230234 - 36230200
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatt 273  Q
    ||||||||||||||||||||||| |||||||||||    
T  36230234 aaaaattgttagaaaatagttgttcaaatatcatt 36230200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 43755705 - 43755751
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    ||||||||||||| | | ||||| |||||||||||||||||||||||    
T  43755705 ttgtcaaaaaattatcataaaatggttgtacaaatatcatttctctt 43755751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 44112498 - 44112452
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    ||||||||||||||| | ||| | |||||||||||||||||||||||    
T  44112498 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttctctt 44112452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 44672057 - 44672103
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  44672057 ttgtcaaaaagttgttaaaaaatgattgtacaaatatcatttctctt 44672103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 172
Target Start/End: Original strand, 3606023 - 3606060
Alignment:
Q  135 atgataactttgattttctctcttttgattggtcaaaa 172  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  3606023 atgataactttgtttttctctattttgattggtcaaaa 3606060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 22951802 - 22951769
Alignment:
Q  250 gaaaatagttgtacaaatatcatttctctttttt 283  Q
    ||||||||||||| ||||||||||||||||||||    
T  22951802 gaaaatagttgtaaaaatatcatttctctttttt 22951769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 251 - 280
Target Start/End: Original strand, 23044916 - 23044945
Alignment:
Q  251 aaaatagttgtacaaatatcatttctcttt 280  Q
    ||||||||||||||||||||||||||||||    
T  23044916 aaaatagttgtacaaatatcatttctcttt 23044945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 25989011 - 25989056
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||| |||| |||||| ||||| ||||||||||||||||||||||    
T  25989011 ttgtctaaaagttgttaaaaaatggttgtacaaatatcatttctct 25989056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 251 - 288
Target Start/End: Original strand, 29706748 - 29706785
Alignment:
Q  251 aaaatagttgtacaaatatcatttctcttttttaattt 288  Q
    ||||| ||||||||||||||||||||||||||| ||||    
T  29706748 aaaatggttgtacaaatatcatttctcttttttcattt 29706785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 30439294 - 30439249
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||||||||||||| | ||| | ||||||||||||||||||||||    
T  30439294 ttgtcaaaaaattgtcataaattggttgtacaaatatcatttctct 30439249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 31436864 - 31436819
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    |||||||||| |||| ||||| | ||||||||||||||||||||||    
T  31436864 ttgtcaaaaagttgtgagaaagtggttgtacaaatatcatttctct 31436819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 34002208 - 34002285
Alignment:
Q  96 tgagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaa 173  Q
    |||||||||||||||||| |||| ||||   ||||||| || | |||||| |||||||||||| | ||||||| ||||    
T  34002208 tgagtagtgatatatgtacaactatttgggacaactttgatcacaactttcattttctctcttcttattggtccaaaa 34002285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 247 - 280
Target Start/End: Original strand, 36750524 - 36750557
Alignment:
Q  247 ttagaaaatagttgtacaaatatcatttctcttt 280  Q
    |||| |||||||||||||||||||||||||||||    
T  36750524 ttaggaaatagttgtacaaatatcatttctcttt 36750557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 44641930 - 44641975
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||||||||||||| | ||| | ||||||||||||||||||||||    
T  44641930 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttctct 44641975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 240 - 281
Target Start/End: Original strand, 48325801 - 48325842
Alignment:
Q  240 aaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    |||||||| | ||||| |||||||||||||||||||||||||    
T  48325801 aaaattgtcacaaaatggttgtacaaatatcatttctctttt 48325842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 50017450 - 50017495
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    |||||||||| |||| | ||||| ||||||||||||||||||||||    
T  50017450 ttgtcaaaaagttgtaataaaattgttgtacaaatatcatttctct 50017495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 51193158 - 51193203
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||| ||||||||||| ||||| | ||||||||||||||||||||    
T  51193158 ttgtccaaaaattgttataaaatggatgtacaaatatcatttctct 51193203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 1e-56; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 393 - 789
Target Start/End: Original strand, 25509569 - 25509967
Alignment:
Q  393 tttatcgaaatggctattttgtttatgaatttgtcatatatcaatcaaattagtccctccgttcatttggggtgttaacgacgataatgtggccgttaac 492  Q
    |||||| |||||||||||||||   ||||||||| |||| || ||||| ||| | ||||||| |||||||||||||||||  | | | ||||||||||||    
T  25509569 tttatcaaaatggctattttgtccttgaatttgtgatatgtcgatcaatttacttcctccgtacatttggggtgttaacggtgctgacgtggccgttaac 25509668  T
Q  493 ttctcacatgagttgtcatgtcagatgccacataa-cagggactaatttggccgatggcaaccaaaattttcaaggacgaaattgattga-ttgcataaa 590  Q
       ||| |||  ||| |||| |||||| |||||||  ||||||||||||||| ||| |  |||||||||||||||||| ||||||||||| |||||||||    
T  25509669 ccttcaaatggcttgccatgacagatgtcacataagtagggactaatttggctgatagtgaccaaaattttcaaggacaaaattgattgatttgcataaa 25509768  T
Q  591 atgttatgcaatttaatctctgttatgtttgactaactatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaac 690  Q
    ||| ||| ||||||| || ||| ||| |||||||||| ||||||  |||||||| ||||| |||||||| |||  ||||||||  |||||||||||||||    
T  25509769 atgctattcaatttagtccctgctatatttgactaacaatcaaattgatccctacattatgttaaaaaa-ccatcaaataagttcttgaattatataaac 25509867  T
Q  691 atatatcaatttgattctttaagcatatatgtg---cagaacaaagtaaaaaagtcagaaaacgcaactttatccttgaaaataccatcaaataagtcat 787  Q
    | ||||||||||||| ||| || ||||||||||    | || |||||||||| | ||||| |  ||| || |||||||||||||||||  ||||||||||    
T  25509868 agatatcaatttgatccttgaaacatatatgtgacaaaaaaaaaagtaaaaatgccagaaga--caaattcatccttgaaaataccatttaataagtcat 25509965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 802 - 968
Target Start/End: Complemental strand, 24497502 - 24497338
Alignment:
Q  802 aaatattgcatagggcaaaaacaacccaactatggagcctaattcaaacaagtctgaatattacattttcaaaagcatattttaaatacgttttcatcaa 901  Q
    ||||||| ||||||  ||||  ||||||||||||| || |||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||    
T  24497502 aaatattacataggcaaaaagaaacccaactatggggcataattcaaacaagtctaaatattacatttccaaaagcatattttaaatacgtttccatcaa 24497403  T
Q  902 gcatcacttctttgaaaatctgggggttggggataaactccatgaatttaggattgagtcgaaccgg 968  Q
    |||||||||||||||||||| ||  ||| ||||||| ||||  ||||||||| ||||||||||||||    
T  24497402 gcatcacttctttgaaaatccggaagtt-gggataagctccgcgaatttagg-ttgagtcgaaccgg 24497338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 824 - 968
Target Start/End: Original strand, 15457892 - 15458034
Alignment:
Q  824 aacccaactatggagcctaattcaaacaagtctgaatattacattttcaaaagcatattttaaatacgttttcatcaagcatcacttctttgaaaatctg 923  Q
    ||||||||||||   | |||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||| ||||||||||| |||| ||||| |    
T  15457892 aacccaactatgagacataattcaaacaagtctaaatattacattttcaaaagcatattttaaatatgtttccattaagcatcacttttttggaaatccg 15457991  T
Q  924 ggggttggggataaactccatgaatttaggattgagtcgaaccgg 968  Q
    | |||| ||||||||||||||||||||||| ||||||||||||||    
T  15457992 gaggtt-gggataaactccatgaatttagg-ttgagtcgaaccgg 15458034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 618 - 763
Target Start/End: Complemental strand, 24497741 - 24497597
Alignment:
Q  618 tttgactaactatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaatttgattctttaagcata 717  Q
    ||||| ||| |||||||  |||| ||| ||||||||||||| ||||  |||||| || ||||||||| ||| |||||||||||||||| ||| |||||||    
T  24497741 tttgaataattatcaaattgatcactacattatattaaaaa-cccatcaaataaatcattgaattatttaatcatatatcaatttgatccttgaagcata 24497643  T
Q  718 tatgtgcagaacaaagtaaaaaagtcagaaaacgcaactttatcct 763  Q
    ||||||||||| ||||||||||||| |||| || |||||| |||||    
T  24497642 tatgtgcagaagaaagtaaaaaagttagaagacacaacttgatcct 24497597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 828 - 968
Target Start/End: Original strand, 25510047 - 25510184
Alignment:
Q  828 caactatggagcctaattcaaacaagtctgaatattacattttcaaaagcatattttaaatacgttttcatcaagcatcacttctttgaaaatctggggg 927  Q
    |||||||||  | |||| ||||||| ||| | |||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| ||||| | ||     
T  25510047 caactatgggacataatgcaaacaattctaagtattacattttcaaaagcatatattaaatacgtttttatcaatcatcacttctttggaaatccgtgga 25510146  T
Q  928 ttggggataaactccatgaatttaggattgagtcgaaccgg 968  Q
    |  || |||||||||||||||||| ||||||||||||||||    
T  25510147 t--ggaataaactccatgaattta-gattgagtcgaaccgg 25510184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 95 - 175
Target Start/End: Original strand, 36415949 - 36416029
Alignment:
Q  95 atgagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaata 175  Q
    ||||||||||||||||||| ||||||||| | ||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  36415949 atgagtagtgatatatgtacaactctttggtacaactttcatgacaactttggttttctctcttttgattggtcaaaaata 36416029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 15290911 - 15290990
Alignment:
Q  98 agtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    |||||||||||||||| ||||||||| | |||||||||| |||| ||| |||||||| ||||||||||||||||||||||    
T  15290911 agtagtgatatatgtacaactctttggtacaacttttataataattttaattttctcccttttgattggtcaaaaataat 15290990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 824 - 949
Target Start/End: Complemental strand, 27076455 - 27076334
Alignment:
Q  824 aacccaactatggagcctaattcaaacaagtctgaatattacattttc-aaaagcatattttaaatacgttttcatcaagcatcacttctttgaaaatct 922  Q
    |||||||||| || || ||||| |||||||||| |||||||||||||| ||||||||| |||||  | |    |||||| ||||||||||||||||||||    
T  27076455 aacccaactagggggcataatttaaacaagtctaaatattacattttccaaaagcataatttaatcagg----catcaaacatcacttctttgaaaatct 27076360  T
Q  923 gggggttggggataaactccatgaatt 949  Q
     |||||| |||||||||||||||||||    
T  27076359 tggggtt-gggataaactccatgaatt 27076334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 103 - 174
Target Start/End: Original strand, 2325881 - 2325952
Alignment:
Q  103 tgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaat 174  Q
    |||||| |||| ||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  2325881 tgatatttgtacaactctttgatgcaacttttatgataactttgattctctctctttcgattggtcacaaat 2325952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 176
Target Start/End: Complemental strand, 285408 - 285329
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataa 176  Q
    ||||||||||||||||| ||||||||  | ||||||| |||  |||||| ||||||| ||||||||||||||||||||||    
T  285408 gagtagtgatatatgtacaactctttagtacaactttcatgccaactttaattttctatcttttgattggtcaaaaataa 285329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 177
Target Start/End: Complemental strand, 21023479 - 21023400
Alignment:
Q  98 agtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    |||||||||||||||| ||||||||| | ||| ||| |||||||||||  |||||| |||||||||| ||||||||||||    
T  21023479 agtagtgatatatgtacaactctttggtacaattttcatgataactttagttttctatcttttgatttgtcaaaaataat 21023400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 177
Target Start/End: Complemental strand, 32425133 - 32425054
Alignment:
Q  98 agtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    |||||||| ||||||| |||| |||| | ||||||| |||| |||||| ||||||| |||||||||||||||||||||||    
T  32425133 agtagtgacatatgtacaactatttggtacaactttcatgacaactttaattttctatcttttgattggtcaaaaataat 32425054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 418 - 595
Target Start/End: Complemental strand, 24498075 - 24497899
Alignment:
Q  418 tgaatttgtcatatatcaatcaaattagtccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcaga 517  Q
    |||||||||||||| |||||||| |||||||||| || || || | ||||||||   | |   ||| |||||||  || |||||| ||   ||||| |||    
T  24498075 tgaatttgtcatatgtcaatcaatttagtccctctgtccaatttgagtgttaacattgct---gtgaccgttaatctcacacatgggtctccatgttaga 24497979  T
Q  518 tgccacataa-cagggactaatttggccgatggcaaccaaaattttcaaggacgaaattgattga-ttgcataaaatgtt 595  Q
    |||||||||| ||| |||||||||||||||| |  | |||||||| ||||||| ||||||||||| ||||||||||||||    
T  24497978 tgccacataagcagagactaatttggccgatagtgatcaaaatttacaaggaccaaattgattgatttgcataaaatgtt 24497899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 6529063 - 6529019
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  6529063 ttgtcaaaaaattgttagaaaataattgtacaaatatcatttctc 6529019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 25038262 - 25038182
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    |||| ||||||| |||| ||||||||| | ||||||| |||||||||||  |||| ||||||||||||||| |||||||||    
T  25038262 gagtggtgatatttgtacaactctttggtacaactttcatgataactttagttttatctcttttgattggttaaaaataat 25038182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 628 - 788
Target Start/End: Complemental strand, 27076843 - 27076684
Alignment:
Q  628 tatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaatttgattctttaagcatatatgtgcaga 727  Q
    |||||||  |||||||| ||||||| |||| |||  | |||||| || ||||||||| |||||| || ||||| |||| |||   ||| |||||||||||    
T  27076843 tatcaaattgatccctacattatataaaaataccatc-aaataaatcattgaattatttaaacagatgtcaatgtgatccttggtgcaaatatgtgcaga 27076745  T
Q  728 acaaagtaaaaaagtcagaaaacgcaactttatccttgaaaataccatcaaataagtcata 788  Q
    | ||||||||||||| | || ||  || || ||||||||  ||||||||||||||||||||    
T  27076744 ataaagtaaaaaagtaaaaagacataatttgatccttgattataccatcaaataagtcata 27076684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 36416089 - 36416133
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  36416089 ttgtcaaaaaattgttagaaaatggttgtacaaatatcatttctc 36416133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 5996711 - 5996664
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  5996711 ttgtctaaaaattgttaaaaaatagttgtacaaatatcatttctcttt 5996664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 345 - 424
Target Start/End: Complemental strand, 15459303 - 15459224
Alignment:
Q  345 tcaaattcgttcttgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatggctattttgtttatgaattt 424  Q
    |||||||||| |||||||||||| | |||||||||||   ||| | |||||||||||||||||||||||||  |||||||    
T  15459303 tcaaattcgtccttgaatttgcaaggatcggacaaaatcgtcccccaatttatcgaaatggctattttgttcctgaattt 15459224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 283
Target Start/End: Original strand, 6758824 - 6758868
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctctttttt 283  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||    
T  6758824 aaaaattgttagaaaatggttgtacatatatcatttctctttttt 6758868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 751 - 794
Target Start/End: Original strand, 15457777 - 15457820
Alignment:
Q  751 gcaactttatccttgaaaataccatcaaataagtcataagtctt 794  Q
    ||||||| |||||||||||||||||||||||| |||||||||||    
T  15457777 gcaacttcatccttgaaaataccatcaaataaatcataagtctt 15457820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 38500987 - 38500940
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    ||||||||||||||| | ||||| ||||||||||||||||||||||||    
T  38500987 ttgtcaaaaaattgtcacaaaatggttgtacaaatatcatttctcttt 38500940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 7077258 - 7077308
Alignment:
Q  127 caacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    |||||||  ||| ||||||| ||||||||||||||||||||||||||||||    
T  7077258 caactttggtgacaactttgtttttctctcttttgattggtcaaaaataat 7077308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 2050971 - 2050926
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||| ||||||||||| ||||| ||||||||||||||||||||||    
T  2050971 ttgtccaaaaattgttacaaaatggttgtacaaatatcatttctct 2050926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 2456070 - 2456025
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||||||||||||||| |||||||||||| | |||||||||||||    
T  2456070 ttgtcaaaaaattgttataaaatagttgtatagatatcatttctct 2456025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 696 - 785
Target Start/End: Complemental strand, 19998135 - 19998046
Alignment:
Q  696 tcaatttgattctttaagcatatatgtgcagaacaaagtaaaaaagtcagaaaacgcaactttatccttgaaaataccatcaaataagtc 785  Q
    ||||| ||||||||   |||||||||||||||| ||||||||||||| |  | || ||| || ||||||||  |||||||||||||||||    
T  19998135 tcaatgtgattcttagtgcatatatgtgcagaataaagtaaaaaagtaaagagacacaatttgatccttgattataccatcaaataagtc 19998046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 41192631 - 41192586
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    |||||||||||||||   ||||||||||||||||||||||||||||    
T  41192631 ttgtcaaaaaattgtagcaaaatagttgtacaaatatcatttctct 41192586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 288
Target Start/End: Complemental strand, 6538914 - 6538858
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc-ttttttaattt 288  Q
    ||||||||||||| | | |||||| |||||||||||||||||||| |||||||||||    
T  6538914 ttgtcaaaaaattatcacaaaataattgtacaaatatcatttctcattttttaattt 6538858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 15529832 - 15529876
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||||||||||||| ||||||||||||| ||||| |||||||    
T  15529832 ttgtcaaaaaattgttataaaatagttgtactaatattatttctc 15529876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 31708414 - 31708370
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||||||||| |||||| ||||| |||||||||||||||||||||    
T  31708414 ttgtcaaaaagttgttataaaatggttgtacaaatatcatttctc 31708370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 32873176 - 32873220
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||||||||| |||||||||| | |||||||||||||||||||||    
T  32873176 ttgtcaaaaagttgttagaaattggttgtacaaatatcatttctc 32873220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 33393678 - 33393630
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    |||| ||||| |||| ||||||| |||||||||||||||||||||||||    
T  33393678 ttgttaaaaagttgtgagaaaatggttgtacaaatatcatttctctttt 33393630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 34428204 - 34428156
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    ||||| |||| |||| | |||||||||||||||||||||||||||||||    
T  34428204 ttgtctaaaagttgtcaaaaaatagttgtacaaatatcatttctctttt 34428156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 238 - 281
Target Start/End: Complemental strand, 4434521 - 4434478
Alignment:
Q  238 aaaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    |||||||||| | ||||| |||||||||||||||||||||||||    
T  4434521 aaaaaattgtcaaaaaatggttgtacaaatatcatttctctttt 4434478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 282
Target Start/End: Original strand, 13547267 - 13547310
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctcttttt 282  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||    
T  13547267 aaaaattgttacaaaatagttgtatgaatatcatttctcttttt 13547310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 276
Target Start/End: Original strand, 24463258 - 24463301
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttct 276  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||||    
T  24463258 ttgtcaaaaaattgttacaaaatggttgtacaaatataatttct 24463301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 29687119 - 29687076
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctcttttt 282  Q
    |||||||||||||||||  |||||||||||||||||||| ||||    
T  29687119 aaaaattgttagaaaattattgtacaaatatcatttctcatttt 29687076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 36572735 - 36572688
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    |||||||||| |||| | ||||||||| ||||||||||||||||||||    
T  36572735 ttgtcaaaaagttgtcacaaaatagttatacaaatatcatttctcttt 36572688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 509 - 583
Target Start/End: Original strand, 43316944 - 43317019
Alignment:
Q  509 catgtcagatgccacataa-cagggactaatttggccgatggcaaccaaaattttcaaggacgaaattgattgatt 583  Q
    ||||||||| ||||||||| ||||||||||||||||||||   ||| || ||||| |||||| ||| |||||||||    
T  43316944 catgtcagacgccacataaacagggactaatttggccgataataacaaacattttgaaggactaaactgattgatt 43317019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 275
Target Start/End: Complemental strand, 285271 - 285229
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttc 275  Q
    ||||||||||||| ||||||||| ||| |||||||||||||||    
T  285271 ttgtcaaaaaattattagaaaatggttctacaaatatcatttc 285229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 251 - 285
Target Start/End: Original strand, 12891141 - 12891175
Alignment:
Q  251 aaaatagttgtacaaatatcatttctcttttttaa 285  Q
    ||||| |||||||||||||||||||||||||||||    
T  12891141 aaaatggttgtacaaatatcatttctcttttttaa 12891175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 251 - 281
Target Start/End: Original strand, 19844354 - 19844384
Alignment:
Q  251 aaaatagttgtacaaatatcatttctctttt 281  Q
    |||||||||||||||||||||||||||||||    
T  19844354 aaaatagttgtacaaatatcatttctctttt 19844384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 239 - 277
Target Start/End: Complemental strand, 22098293 - 22098255
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  22098293 aaaagttgttagaaaatggttgtacaaatatcatttctc 22098255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 22647588 - 22647634
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    |||||||||| |||||||||| | ||||| |||||||||||||||||    
T  22647588 ttgtcaaaaagttgttagaaattggttgtgcaaatatcatttctctt 22647634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 460 - 569
Target Start/End: Complemental strand, 27350501 - 27350391
Alignment:
Q  460 tggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacata-acagggactaatttggccgatggcaaccaaaa 558  Q
    |||||||||||||| | | | |||||||||||| |||||||||  ||| ||||||||| |||||| |   |||||||||| | | |||| | |||||| |    
T  27350501 tggggtgttaacgaagctgacgtggccgttaacctctcacatggattgccatgtcagacgccacacatgtagggactaatatagacgattgtaaccaaca 27350402  T
Q  559 ttttcaaggac 569  Q
    |||||||||||    
T  27350401 ttttcaaggac 27350391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 251 - 281
Target Start/End: Complemental strand, 38919889 - 38919859
Alignment:
Q  251 aaaatagttgtacaaatatcatttctctttt 281  Q
    |||||||||||||||||||||||||||||||    
T  38919889 aaaatagttgtacaaatatcatttctctttt 38919859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 42909763 - 42909713
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttttt 283  Q
    |||||||||| |||| ||||| | ||||||||||||| |||||||||||||    
T  42909763 ttgtcaaaaagttgtgagaaagtggttgtacaaatataatttctctttttt 42909713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 236 - 281
Target Start/End: Complemental strand, 125133 - 125088
Alignment:
Q  236 tcaaaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    ||||||| |||| | ||| |||||||||||||||||||||||||||    
T  125133 tcaaaaagttgtcacaaagtagttgtacaaatatcatttctctttt 125088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 3722964 - 3723041
Alignment:
Q  96 tgagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaa 173  Q
    |||||| ||||||||||| |||  ||||   ||||||| |||| |||||| |||||||||||||| ||||||| ||||    
T  3722964 tgagtaatgatatatgtacaaccatttgggacaactttgatgacaactttcattttctctctttttattggtccaaaa 3723041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 3723103 - 3723148
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||||||| ||||| | ||| ||||||||||||||||||||||||    
T  3723103 ttgtcaaaagattgtaataaagtagttgtacaaatatcatttctct 3723148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 11881014 - 11881059
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||| |||| |||||| |||||| |||||||||||||||||||||    
T  11881014 ttgtctaaaagttgttaaaaaataattgtacaaatatcatttctct 11881059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 897 - 949
Target Start/End: Complemental strand, 19997712 - 19997660
Alignment:
Q  897 atcaagcatcacttctttgaaaat-ctgggggttggggataaactccatgaatt 949  Q
    |||||||||||||||||||||||| | |||||||||  ||||||||||||||||    
T  19997712 atcaagcatcacttctttgaaaattccgggggttgga-ataaactccatgaatt 19997660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 251 - 280
Target Start/End: Complemental strand, 29803251 - 29803222
Alignment:
Q  251 aaaatagttgtacaaatatcatttctcttt 280  Q
    ||||||||||||||||||||||||||||||    
T  29803251 aaaatagttgtacaaatatcatttctcttt 29803222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 29807029 - 29807074
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||||||| ||||||| ||||| ||||||||||| ||||||||||    
T  29807029 ttgtcaaaagattgttaaaaaatggttgtacaaatgtcatttctct 29807074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 251 - 280
Target Start/End: Complemental strand, 35165705 - 35165676
Alignment:
Q  251 aaaatagttgtacaaatatcatttctcttt 280  Q
    ||||||||||||||||||||||||||||||    
T  35165705 aaaatagttgtacaaatatcatttctcttt 35165676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 173
Target Start/End: Complemental strand, 41192726 - 41192693
Alignment:
Q  140 aactttgattttctctcttttgattggtcaaaaa 173  Q
    ||||||| ||||||||||||||||||||||||||    
T  41192726 aactttgtttttctctcttttgattggtcaaaaa 41192693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 99; Significance: 2e-48; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 347 - 836
Target Start/End: Complemental strand, 6138 - 5655
Alignment:
Q  347 aaattcgttcttgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatggctattttgtttatgaatttgtcatatatcaatcaaattagt 446  Q
    |||| ||| ||||||||| |||||||||||||||||  ||| |||||| |||||||||    ||||||   |||||||  || |  || |||||||||||    
T  6138 aaatccgtccttgaattttcacgaatcggacaaaaacgtcccctaattaatcgaaatgcacgttttgtccctgaatttaacaaacgtccatcaaattagt 6039  T
Q  447 ccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataa-cagggactaatttggccg 545  Q
    |||| ||| |||||||||||||||||  ||| | ||||| |||||| ||||| |||  ||| ||||||| | ||||||||| |||||||||| |||        
T  6038 ccctacgtccatttggggtgttaacggtgatgacgtggctgttaacatctcagatggattgccatgtcaaacgccacataagcagggactaaattgatgt 5939  T
Q  546 atggcaaccaaaattttcaaggacgaaattgattgattgcataaaatgttatgcaatttaatctctgttatgtttgactaactatcaaagcgatccctaa 645  Q
    ||    |  ||||||  ||||||||||||||||||||| |  | ||| ||||| |||  |||| ||||||  ||| ||| ||||||||| |||||||| |    
T  5938 ataatgaaaaaaatt--caaggacgaaattgattgatttctgacaatattatgaaatacaatccctgttaatttttacttactatcaaatcgatccctga 5841  T
Q  646 attatattaaaaaacccacgaaataagtctttgaattatataaacatatatc-aatttgattctttaagcatatatgtgcagaacaaagtaaaaaagtca 744  Q
    ||||  |||||||| |  | ||||||||| |||||||||||||| |||| || || ||||| ||| |||||||||| ||||||||||| |||||||| ||    
T  5840 attactttaaaaaatcgtc-aaataagtccttgaattatataaatatatttccaacttgatccttgaagcatatatttgcagaacaaattaaaaaagaca 5742  T
Q  745 gaaaacgcaactttatccttgaaaataccatcaaataagtcataagtcttaactatgaaatattgcatagggcaaaaacaacccaactatgg 836  Q
      | || |||||| |||||||||||||||||||||||||||||  ||||||| | ||||||||| |||| |||||||  |||||||||||||    
T  5741 --acacacaacttcatccttgaaaataccatcaaataagtcat--gtcttaagtttgaaatattacata-ggcaaaagtaacccaactatgg 5655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 1e-40; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 345 - 605
Target Start/End: Complemental strand, 38884919 - 38884655
Alignment:
Q  345 tcaaattcgttcttgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatggct-attttgtttatgaatttgtcatatatcaatcaaatt 443  Q
    |||||||| | |||| ||||| | |||| ||||||||  |||||||||||||| ||||||| | ||||||| | |||||||||||||| |||||||| ||    
T  38884919 tcaaattcatccttgcatttgtatgaataggacaaaatcatcctctaatttatggaaatgggttattttgtctttgaatttgtcatatgtcaatcaattt 38884820  T
Q  444 agtccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataac-agggactaatttgg 542  Q
    | | |||||||||| ||||||||||||||  | | ||||| |||||||| | |||||||||||||||||||||||| |||||||  ||  ||||||||||    
T  38884819 aattcctccgttcaattggggtgttaacggtgctgatgtgaccgttaacctatcacatgagttgtcatgtcagatgtcacataaatagaaactaatttgg 38884720  T
Q  543 ccgatggcaaccaaaattttcaaggacgaaattgattga--ttgcataaaatgttatgcaattta 605  Q
     ||||    || |||| ||||||||| ||||||||||||  ||||| |||||| |||||||||||    
T  38884719 tcgataatgacaaaaaatttcaaggatgaaattgattgattttgcagaaaatgctatgcaattta 38884655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 800 - 966
Target Start/End: Complemental strand, 10269059 - 10268896
Alignment:
Q  800 tgaaatattgcatagggcaaaaacaacccaactatggagcctaattcaaacaagtctgaatattacattttcaaaagcatattttaaatacgttttcatc 899  Q
    ||||||||| |||||  ||||| ||| |||||||||| || ||||| |||||||||| |||||||||||| |||||||||||||||||||||||| ||||    
T  10269059 tgaaatattacataga-caaaagcaatccaactatggggcataattgaaacaagtctaaatattacatttccaaaagcatattttaaatacgtttccatc 10268961  T
Q  900 aagcatcacttctttgaaaatctgggggttggggataaactccatgaatttaggattgagtcgaacc 966  Q
    ||  |||||||||||| ||||| | ||||| ||||||||||||||||||||||| ||||||||||||    
T  10268960 aaaaatcacttctttggaaatccgagggtt-gggataaactccatgaatttagg-ttgagtcgaacc 10268896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 346 - 834
Target Start/End: Complemental strand, 44528253 - 44527763
Alignment:
Q  346 caaattcgttcttgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatggctattttgtttatgaatttgtcatatatcaatcaaattag 445  Q
    ||||||||||  |||||||||||||||||| ||||||| ||| | ||||  ||||||||    ||| ||   |||||||  || |  |||||||||||||    
T  44528253 caaattcgtttctgaatttgcacgaatcggccaaaaatgtcccccaattagtcgaaatgcacgtttagtccctgaatttaacaaacgtcaatcaaattag 44528154  T
Q  446 tccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataa-cagggactaatttggcc 544  Q
    ||||| ||| ||||||||| |||||||  ||| | ||||| |||||| ||||| ||| |||||||||||||||||||||||| |||||||||  |||       
T  44528153 tccctacgtccatttggggcgttaacggtgatgacgtggctgttaacatctcatatgggttgtcatgtcagatgccacataagcagggactagattgatg 44528054  T
Q  545 gatggcaaccaaaattttcaaggacgaaattgattgattgcataaaatgttatgcaatttaatctctgttatgtttgactaactatcaaagcgatcccta 644  Q
     ||    || ||||   |||| ||||||||||||||||| || ||||| || |  ||| || || || |||  ||| |||  ||||||||  |||||||     
T  44528053 tataatgacaaaaaaaatcaaagacgaaattgattgatttcagaaaatattttctaatatagtccctattaatttttacttgctatcaaattgatccctg 44527954  T
Q  645 aattatattaaaaaacccacgaaataagtctttgaattatataaacatatat-caatttgattctttaagcatatatgtgcag--aacaaagtaaaaaag 741  Q
    |||||| | |||||| |  | ||||||||| ||||||||||||||||||| | ||| ||||| ||| | |||||||| |||||  ||| |  |||||| |    
T  44527953 aattatttcaaaaaaacgtc-aaataagtccttgaattatataaacatatttccaagttgatccttaatgcatatatttgcagcaaacgatttaaaaatg 44527855  T
Q  742 tcagaaaacgcaactttatccttgaaaataccatcaaataagtcataagtcttaactatgaaatattgcatagggcaaaaacaacccaactat 834  Q
     || || || |||||| ||||||||||||| ||| |||||||||||| ||||||| | ||||||||| |||| ||||||| ||||||||||||    
T  44527854 acaaaacacacaacttcatccttgaaaatatcataaaataagtcatatgtcttaagtttgaaatattacata-ggcaaaagcaacccaactat 44527763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 800 - 962
Target Start/End: Original strand, 11031975 - 11032134
Alignment:
Q  800 tgaaatattgcatagggcaaaaacaacccaactatggagcctaattcaaacaagtctgaatattacattttcaaaagcatattttaaatacgttttcatc 899  Q
    ||||||||||||| || ||||| ||| |||||||||| || ||||| |||||||||| |||||||||||| |||||||||||| ||||||||||| || |    
T  11031975 tgaaatattgcattgg-caaaagcaatccaactatggggcataattgaaacaagtctaaatattacatttccaaaagcatattctaaatacgtttccaac 11032073  T
Q  900 aagcatcacttctttgaaaatctgggggttggggataaactccatgaatttaggattgagtcg 962  Q
    || ||||||||||||| ||||| | ||||| || |||||||||||||||||||| ||||||||    
T  11032074 aaacatcacttctttggaaatccgagggtt-ggaataaactccatgaatttagg-ttgagtcg 11032134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 618 - 763
Target Start/End: Original strand, 11031831 - 11031975
Alignment:
Q  618 tttgactaactatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaatttgattctttaagcata 717  Q
    ||||||||||||||||| ||||||||| || |||||||||| ||  | ||||||||| ||||||||| ||| || ||||||||||||||||| ||||||     
T  11031831 tttgactaactatcaaatcgatccctacataatattaaaaacccgtc-aaataagtccttgaattatttaatcagatatcaatttgattcttgaagcatg 11031929  T
Q  718 tatgtgcagaacaaagtaaaaaagtcagaaaacgcaactttatcct 763  Q
    |||||||| ||||||||||||||||||||| || |||||| |||||    
T  11031930 tatgtgcataacaaagtaaaaaagtcagaagacacaacttgatcct 11031975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 422 - 595
Target Start/End: Original strand, 11031516 - 11031691
Alignment:
Q  422 tttgtcatatatcaatcaaattagtccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgcc 521  Q
    |||||||||| |||||||| ||||||||||||| || ||  ||||||||||| | | |||||||||||||| ||||||||| ||   ||||||||||| |    
T  11031516 tttgtcatatgtcaatcaatttagtccctccgtccaatttaggtgttaacgatgttgatgtggccgttaacctctcacatgggtctccatgtcagatgtc 11031615  T
Q  522 acataa-cagggactaatttggccgatggcaaccaaaattttcaaggacgaaattgattga-ttgcataaaatgtt 595  Q
    |||||| ||| |||||||||||||||| |  |||||||||| ||||||| ||||| ||||| ||||||||||||||    
T  11031616 acataagcagagactaatttggccgatagtgaccaaaatttccaaggactaaatttattgatttgcataaaatgtt 11031691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 433 - 834
Target Start/End: Complemental strand, 37803654 - 37803254
Alignment:
Q  433 tcaatcaaattagtccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataa-cagg 531  Q
    |||||||||||||||||| ||| |||||| || |||||||  ||| | ||||| |||||| ||||| ||| |||| ||||||||||||||||||| ||||    
T  37803654 tcaatcaaattagtccctacgtccatttgtggcgttaacggtgatgacgtggctgttaacatctcatatgggttgccatgtcagatgccacataagcagg 37803555  T
Q  532 gactaatttggccgatggcaaccaaaattttcaaggacgaaattgattgattgcataaaatgttatgcaatttaatctctgttatgtttgactaactatc 631  Q
    |||||| |||    ||    || |||| || ||||||||||||||||||||| || ||||| || |  |||  | || || |||  ||| |||  |||||    
T  37803554 gactaaattgatatataatgacaaaaaatt-caaggacgaaattgattgatttcagaaaatattttctaatacagtccctattaatttttacttgctatc 37803456  T
Q  632 aaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaatttgattctttaagcatatatgtgcag--aac 729  Q
    |||  |||||||||||||| | |||||| |  | ||||||||| ||||||||||||||||| |  ||| ||||| ||| | |||||||| |||||  |||    
T  37803455 aaattgatccctaaattatttcaaaaaaacgtc-aaataagtccttgaattatataaacatttc-caagttgatccttgatgcatatatttgcagcaaac 37803358  T
Q  730 aaagtaaaaaagtcagaaaacgcaactttatccttgaaaataccatcaaataagtcataagtcttaactatgaaatattgcatagggcaaaaacaaccca 829  Q
     || |||||| | || || || |||||| ||||||||||||| ||| |||||| ||||| ||||||| | ||||||||| |||| ||||||| |||||||    
T  37803357 gaattaaaaatgacaaaacacacaacttcatccttgaaaatatcattaaataaatcatatgtcttaagtttgaaatattacata-ggcaaaagcaaccca 37803259  T
Q  830 actat 834  Q
    |||||    
T  37803258 actat 37803254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 622 - 740
Target Start/End: Complemental strand, 9186295 - 9186178
Alignment:
Q  622 actaactatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaatttgattctttaagcatatatg 721  Q
    |||||| |||||| |||||| |  ||||||||||||| ||||  ||||||||| ||||||||| ||| |||||||||||||||| ||| |||||||||||    
T  9186295 actaacaatcaaatcgatccatgcattatattaaaaa-cccatcaaataagtccttgaattatttaatcatatatcaatttgatccttgaagcatatatg 9186197  T
Q  722 tgcagaacaaagtaaaaaa 740  Q
    |||||||||||||||||||    
T  9186196 tgcagaacaaagtaaaaaa 9186178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 715 - 796
Target Start/End: Complemental strand, 38884588 - 38884507
Alignment:
Q  715 atatatgtgcagaacaaagtaaaaaagtcagaaaacgcaactttatccttgaaaataccatcaaataagtcataagtcttaa 796  Q
    ||||||||||||| ||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||| ||||||    
T  38884588 atatatgtgcagaccaaagtaaaaaagtcagaagacacaacttcatccttgaaaataccatcaaataagtcataaatcttaa 38884507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 802 - 920
Target Start/End: Complemental strand, 38884467 - 38884349
Alignment:
Q  802 aaatattgcatagggcaaaaacaacccaactatggagcctaattcaaacaagtctgaatattacattttcaaaagcatattttaaatacgttttcatcaa 901  Q
    ||||||||||||||  ||||  |||||||| |||   | |||||||||||||| | |||||||||||| |||||||||||||||||||| ||| ||||||    
T  38884467 aaatattgcataggcaaaaagaaacccaaccatgagacataattcaaacaagtttaaatattacatttccaaaagcatattttaaatacatttccatcaa 38884368  T
Q  902 gcatcacttctttgaaaat 920  Q
    |||||||||||||| ||||    
T  38884367 gcatcacttctttggaaat 38884349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 39153573 - 39153653
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||||||| ||||||||  |  |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  39153573 gagtagtgatatatgtacaactctttagtataactttcatgataactttgattttctctcttttgattggtcaaaaataat 39153653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 40719533 - 40719613
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||||||| ||||||||  | |||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  40719533 gagtagtgatatatgtacaactctttcgtacaacttttatgacaactttggttttctctcttttgattggtcaaaaataat 40719613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 9550311 - 9550392
Alignment:
Q  96 tgagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    |||||||||||||||||| ||||||||||| ||||||| |||| |||||| ||||||| ||||||||| |||||||||||||    
T  9550311 tgagtagtgatatatgtacaactctttgatacaactttcatgacaactttaattttctatcttttgataggtcaaaaataat 9550392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 420 - 583
Target Start/End: Complemental strand, 9186651 - 9186487
Alignment:
Q  420 aatttgtcatatatcaatcaaattagtccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatg 519  Q
    |||||| ||||| |||||||| |||||||||||||||| ||  ||||||||||   || | |||||||||||| ||||||||| ||   ||||||| |||    
T  9186651 aatttggcatatgtcaatcaatttagtccctccgttcaatttaggtgttaacggtaatgacgtggccgttaacctctcacatgggtctccatgtcaaatg 9186552  T
Q  520 ccacataa-cagggactaatttggccgatggcaaccaaaattttcaaggacgaaattgattgatt 583  Q
     |||| || ||| |||||||||||||||| |  |||||||||| ||| ||| |||||||||||||    
T  9186551 tcacacaagcagagactaatttggccgatagtgaccaaaatttccaatgactaaattgattgatt 9186487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 413 - 595
Target Start/End: Complemental strand, 10269544 - 10269361
Alignment:
Q  413 gtttatgaatttgtcatatatcaatcaaattagtccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatg 512  Q
    |||| |||| ||||||||| |||| ||| ||| ||||||||| || || |||||||||||  | | ||||| |||||||| | ||||||||||   ||||    
T  10269544 gtttctgaacttgtcatatgtcaaccaatttattccctccgtccaatttgggtgttaacggtgctgatgtgcccgttaacctttcacatgagtctccatg 10269445  T
Q  513 tcagatgccacataa-cagggactaatttggccgatggcaaccaaaattttcaaggacgaaattgattga-ttgcataaaatgtt 595  Q
    ||||||| |||| || ||||||||||||||||| || |  ||||||||||| || ||| ||||||||||| ||||||||||||||    
T  10269444 tcagatgtcacacaagcagggactaatttggcc-atagtgaccaaaatttttaaagactaaattgattgatttgcataaaatgtt 10269361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 618 - 763
Target Start/End: Complemental strand, 10269203 - 10269059
Alignment:
Q  618 tttgactaactatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaatttgattctttaagcata 717  Q
    |||||| |||||||||| || ||| || ||||||||||||| ||  | ||||||||| ||| ||||| ||| || |||||||||| || ||| ||||||     
T  10269203 tttgacaaactatcaaatcggtccttacattatattaaaaacccgtc-aaataagtccttgcattatttaatcagatatcaatttaatccttgaagcatg 10269105  T
Q  718 tatgtgcagaacaaagtaaaaaagtcagaaaacgcaactttatcct 763  Q
    |||||||| |||||||||||||||||| || || |||||| |||||    
T  10269104 tatgtgcataacaaagtaaaaaagtcacaagacacaacttgatcct 10269059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 31806481 - 31806401
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||||||||||||||||| | |||||||||| | ||||||  ||||||||| |||||||||| |||||||||    
T  31806481 gagtagtgatatatgtataactctttggtacaacttttattacaactttagttttctctcatttgattggtaaaaaataat 31806401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 618 - 720
Target Start/End: Original strand, 12515502 - 12515603
Alignment:
Q  618 tttgactaactatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaatttgattctttaagcata 717  Q
    ||||||||||||||||| | ||||||| ||||||||||||| ||||  ||||||||| ||||||||| ||| || ||||||||||||| ||| ||| |||    
T  12515502 tttgactaactatcaaatcaatccctacattatattaaaaa-cccatcaaataagtccttgaattatttaatcagatatcaatttgatccttgaagaata 12515600  T
Q  718 tat 720  Q
    |||    
T  12515601 tat 12515603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 418 - 583
Target Start/End: Original strand, 12515167 - 12515323
Alignment:
Q  418 tgaatttgtcatatatcaatcaaattagtccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcaga 517  Q
    ||||||||| | || |||||||| |||||||||||||||| |||| |||||||||  | | | |||||||||||  |||||||||          |||||    
T  12515167 tgaatttgtaaaatgtcaatcaatttagtccctccgttcaattggagtgttaacggtgctgacgtggccgttaagctctcacatg----------tcaga 12515256  T
Q  518 tgccacataa-cagggactaatttggccgatggcaaccaaaattttcaaggacgaaattgattgatt 583  Q
    || | ||||| || |||||||||||||||||    ||||||||||||||||||||||||||||||||    
T  12515257 tgtcgcataagcatggactaatttggccgatattgaccaaaattttcaaggacgaaattgattgatt 12515323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 623 - 705
Target Start/End: Original strand, 12516106 - 12516187
Alignment:
Q  623 ctaactatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaatttgat 705  Q
    |||||||||||| ||||||||| |||||||| ||||| |||  ||||||||  |||||||||||||||||| |||||||||||    
T  12516106 ctaactatcaaatcgatccctacattatatt-aaaaagccatcaaataagtacttgaattatataaacataaatcaatttgat 12516187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 176
Target Start/End: Original strand, 30608597 - 30608678
Alignment:
Q  95 atgagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataa 176  Q
    |||||||||||||| |||| ||||||||  | |||| ||||||| ||||||| |||||| ||||||||||||| ||||||||    
T  30608597 atgagtagtgatatttgtacaactcttttgtacaacctttatgacaactttgtttttctatcttttgattggtaaaaaataa 30608678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 35819120 - 35819039
Alignment:
Q  96 tgagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||| |||||| |||| |||| | |||||| ||||| || ||||||| |||||| ||||||||||||||||||||    
T  35819120 tgagtagtgatctatgtacaactttttggtacaacttctatgacaattttgattgtctctcatttgattggtcaaaaataat 35819039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 666 - 789
Target Start/End: Original strand, 10771196 - 10771317
Alignment:
Q  666 aaataagtctttgaattatataaacatatatcaatttgattctt--taagcatatatgtgcagaacaaagtaaaaaagtcagaaaacgcaactttatcct 763  Q
    ||||||||| |||||||||||||||| || |||||||||| |||  || | |||||| | |||||||||||||||| || |||   || || || |||||    
T  10771196 aaataagtccttgaattatataaacaaatgtcaatttgatccttgatatgaatatatattcagaacaaagtaaaaa-gtgaga---cgtaatttgatcct 10771291  T
Q  764 tgaaaataccatcaaataagtcataa 789  Q
    |||||||| |||||||||||||||||    
T  10771292 tgaaaatatcatcaaataagtcataa 10771317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 31806343 - 31806299
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  31806343 ttgtcaaaaaattgttagaaaatggttgtacaaatatcatttctc 31806299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 236 - 276
Target Start/End: Original strand, 34494668 - 34494708
Alignment:
Q  236 tcaaaaaattgttagaaaatagttgtacaaatatcatttct 276  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  34494668 tcaaaaaattgttagaaaatagttgtacaaatatcatttct 34494708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 35818981 - 35818935
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||    
T  35818981 ttgtcaaaaaattgttagaaaatggttgtgcaaatatcatttctctt 35818935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 10344511 - 10344430
Alignment:
Q  97 gagtagtgatatatgtataactctttgatt-caacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||||||| | || ||||||  |||||||||||| ||| ||| |||||| |||||| ||||||||||||||||    
T  10344511 gagtagtgatatatgtacatctatttgataacaacttttatgacaaccttgtttttctttctttttattggtcaaaaataat 10344430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 9048205 - 9048285
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    |||||||||||| |||| ||||||||  | |||| ||||||| ||||||  || |||||||||||||| ||||||||||||    
T  9048205 gagtagtgatatttgtacaactcttttgtacaacatttatgacaactttatttctctctcttttgatttgtcaaaaataat 9048285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 9738720 - 9738768
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||||||    
T  9738720 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttctctttt 9738768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 16808763 - 16808683
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||| |||| | |||| || |||||| |||||||||||||| ||||||||| ||||||  ||||||| ||||||||||||    
T  16808763 gagtactgatgtttgtacaattctttggttcaacttttatgacaactttgatcttctcttctttgattcgtcaaaaataat 16808683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 824 - 968
Target Start/End: Original strand, 17807959 - 17808098
Alignment:
Q  824 aacccaactatggagcctaattcaaacaagtctgaatattacattttc-aaaagcatattttaaatacgttttcatcaagcatcacttctttgaaaatct 922  Q
    |||||| ||| || || ||||| |||||||||| ||| |||||||||| ||||||||| |||||  | ||    ||||| ||||||||||||| |||||     
T  17807959 aacccagctagggggcataatttaaacaagtctaaattttacattttccaaaagcataatttaatcaagt----atcaaacatcacttctttggaaatcc 17808054  T
Q  923 gggggttggggataaactccatgaatttaggattgagtcgaaccgg 968  Q
     |||||| ||||||||||||||||| ||||| |||||| |||||||    
T  17808055 tggggtt-gggataaactccatgaa-ttagggttgagtagaaccgg 17808098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 20473823 - 20473779
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||    
T  20473823 ttgtcaaaaaattgttataaaatggttgtacaaatatcatttctc 20473779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 34996249 - 34996329
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||||||| |||| |||| | ||||||| |||| |||||| |||| ||||||||| |||||||  |||||||    
T  34996249 gagtagtgatatatgtacaactatttggtacaactttgatgacaactttcatttgctctcttttcattggtccgaaataat 34996329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 39153709 - 39153753
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||||||||||||||||||| || ||||||||||||||||||    
T  39153709 ttgtcaaaaaattgttagaaaattgtggtacaaatatcatttctc 39153753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 832 - 968
Target Start/End: Original strand, 38882318 - 38882450
Alignment:
Q  832 tatggagcctaattcaaacaagtctgaatattacattttcaaaagcatattttaaatacgttttcatcaagcatcacttctttgaaaatctgggggttgg 931  Q
    ||||| || ||||||||| ||| || |||||||||  | ||||| |||||||||||      ||||| |||||||||||||||||||||| || ||||      
T  38882318 tatggggcataattcaaataagcctaaatattacaaatccaaaaacatattttaaac-----ttcatgaagcatcacttctttgaaaatccggaggtt-t 38882411  T
Q  932 ggataaactccatgaatttagga--ttgagtcgaaccgg 968  Q
    | ||||||||||||||||||| |  ||||||||||||||    
T  38882412 gtataaactccatgaatttagtatgttgagtcgaaccgg 38882450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 40719670 - 40719717
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    |||||||||  |||||||||||| ||||||||||||||||||||||||    
T  40719670 ttgtcaaaaggttgttagaaaatggttgtacaaatatcatttctcttt 40719717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 67194 - 67236
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    |||| |||||||||||| |||||||||||||||||||||||||    
T  67194 aaaagttgttagaaaatggttgtacaaatatcatttctctttt 67236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 12959982 - 12959936
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    ||||||||||||||||||||| | ||||| |||||||||||||||||    
T  12959982 ttgtcaaaaaattgttagaaattggttgtgcaaatatcatttctctt 12959936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 1332495 - 1332540
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  1332495 ttgtcaaaaaattgttataaaatggttgtacaattatcatttctct 1332540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 3988949 - 3988904
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    |||||||||| |||||||||| | ||||||||||||||||||||||    
T  3988949 ttgtcaaaaatttgttagaaagtggttgtacaaatatcatttctct 3988904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 9048343 - 9048388
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    |||||||||| |||||||||||| ||| ||||||||||||||||||    
T  9048343 ttgtcaaaaagttgttagaaaatggttatacaaatatcatttctct 9048388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 36023121 - 36023076
Alignment:
Q  240 aaaattgttagaaaatagttgtacaaatatcatttctcttttttaa 285  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||    
T  36023121 aaaattgttaaaaaataattgttcaaatatcatttctcttttttaa 36023076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 41639820 - 41639861
Alignment:
Q  238 aaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    |||||||||||||||||| | |||||||||||||||||||||    
T  41639820 aaaaaattgttagaaaatggatgtacaaatatcatttctctt 41639861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 481 - 569
Target Start/End: Complemental strand, 44620614 - 44620525
Alignment:
Q  481 gtggccgttaacttctcacatgagttgtcatgtcagatgccacataa-cagggactaatttggccgatggcaaccaaaattttcaaggac 569  Q
    |||||||||||| |||||||||   || ||||||||| |||| |||| || |||||||| |||||||| | |||||| ||||||||||||    
T  44620614 gtggccgttaacctctcacatggactgccatgtcagacgccatataagcatggactaatatggccgattgtaaccaacattttcaaggac 44620525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 6004988 - 6004940
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    ||||| ||||||||| | ||| |||||||||||||||||||||||||||    
T  6004988 ttgtctaaaaattgtcacaaagtagttgtacaaatatcatttctctttt 6004940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 9431312 - 9431360
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    ||||||||||||||||||||| |  ||||||||| ||||||||||||||    
T  9431312 ttgtcaaaaaattgttagaaattgattgtacaaagatcatttctctttt 9431360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 10553110 - 10553154
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||    
T  10553110 ttgtcaaaaaattgtcagaaagtggttgtacaaatatcatttctc 10553154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 279
Target Start/End: Complemental strand, 11584134 - 11584094
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    ||||||||| ||||||| |||||||||||||||||||||||    
T  11584134 aaaaattgtaagaaaatggttgtacaaatatcatttctctt 11584094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 22767176 - 22767132
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||||||||| |||| ||||||| |||||||||||||||||||||    
T  22767176 ttgtcaaaaagttgtgagaaaatggttgtacaaatatcatttctc 22767132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 27630941 - 27630893
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    ||||||||||||||| | ||||| | |||||||||||||||||||||||    
T  27630941 ttgtcaaaaaattgtcataaaatggatgtacaaatatcatttctctttt 27630893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 34494527 - 34494607
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    |||||||||||| |||| | ||||||  | ||||| |||||| ||||||||||||||||  ||||||||| ||| ||||||    
T  34494527 gagtagtgatatttgtacatctctttagtacaactcttatgacaactttgattttctcttctttgattggccaacaataat 34494607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 173
Target Start/End: Original strand, 40413252 - 40413328
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaa 173  Q
    |||||||||||| || | |||  |||||| ||||||||||||||||||   ||||||||||||| ||| ||||||||    
T  40413252 gagtagtgatatttgaacaaccatttgatacaacttttatgataacttcttttttctctcttttcattagtcaaaaa 40413328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 40608557 - 40608513
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||    
T  40608557 ttgtcaaaaaattgttagaaattgattgtacaaatatcatttctc 40608513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 43873718 - 43873762
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||||||||||| | ||||| |||||||||||||||||||||    
T  43873718 ttgtcaaaaaattgtcacaaaatggttgtacaaatatcatttctc 43873762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 749 - 836
Target Start/End: Original strand, 15143360 - 15143446
Alignment:
Q  749 acgcaactttatccttgaaaataccatcaaataagtcataagtcttaactatgaaatattgcatagggcaaaaacaacccaactatgg 836  Q
    ||||||||| ||||||||||||||||  |||||| ||||| |||||||   ||||||||| |||| ||||||| |||  |||||||||    
T  15143360 acgcaacttcatccttgaaaataccactaaataactcatatgtcttaaggttgaaatattacata-ggcaaaagcaattcaactatgg 15143446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 618 - 785
Target Start/End: Complemental strand, 24285701 - 24285535
Alignment:
Q  618 tttgactaactatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaatttgattctttaagcata 717  Q
    |||| |||| ||||||| ||||||||| ||||||| |||| |||  | ||||||  | |||| |||| |||||| || ||||| |||| |||   |||||    
T  24285701 tttgcctaagtatcaaatcgatccctacattatataaaaataccatc-aaataaacccttgacttatttaaacacatgtcaatgtgatccttggtgcata 24285603  T
Q  718 tatgtgcagaacaaagtaaaaaagtcagaaaacgcaactttatccttgaaaataccatcaaataagtc 785  Q
    |||||||| || |||||||||| || |  | || ||| || ||||||||  |||||||||||||||||    
T  24285602 tatgtgcaaaataaagtaaaaaggttaagagacacaatttgatccttgattataccatcaaataagtc 24285535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 238 - 277
Target Start/End: Original strand, 38288240 - 38288279
Alignment:
Q  238 aaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  38288240 aaaaaattgttataaaatagttgtacaaatataatttctc 38288279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 236 - 282
Target Start/End: Complemental strand, 3950151 - 3950105
Alignment:
Q  236 tcaaaaaattgttagaaaatagttgtacaaatatcatttctcttttt 282  Q
    |||||||||| | | ||||| ||||||||||||||||||||||||||    
T  3950151 tcaaaaaattataataaaatggttgtacaaatatcatttctcttttt 3950105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 16808625 - 16808579
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    |||||||||| |||||||||||| ||||| ||||||||| |||||||    
T  16808625 ttgtcaaaaagttgttagaaaatggttgtccaaatatcaattctctt 16808579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 239 - 277
Target Start/End: Original strand, 25830279 - 25830317
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  25830279 aaaagttgttagaaaatggttgtacaaatatcatttctc 25830317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 34996387 - 34996433
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    ||||||||||||||| | ||| | |||||||||||||||||||||||    
T  34996387 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttctctt 34996433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 36497705 - 36497659
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    ||||| |||| |||| | |||||||||||||||||||||||||||||    
T  36497705 ttgtctaaaagttgtcacaaaatagttgtacaaatatcatttctctt 36497659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 239 - 277
Target Start/End: Original strand, 42786693 - 42786731
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  42786693 aaaaattgtaagaaaatggttgtacaaatatcatttctc 42786731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 43715919 - 43715873
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    |||||| |||| | ||||||||| |||||||||||||||||||||||    
T  43715919 ttgtcacaaaagttttagaaaatggttgtacaaatatcatttctctt 43715873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 9550434 - 9550479
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    |||||||||| ||||||||||||  ||| |||||||||||||||||    
T  9550434 ttgtcaaaaagttgttagaaaatgattggacaaatatcatttctct 9550479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 404
Target Start/End: Original strand, 15142972 - 15143028
Alignment:
Q  347 aaattcgttcttgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatg 404  Q
    |||||||| ||||||||| |||||||||||||||||  ||||| |||| |||||||||    
T  15142972 aaattcgtccttgaattttcacgaatcggacaaaaacgtcctc-aattaatcgaaatg 15143028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 38504214 - 38504169
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    |||||||||||||||   ||||| ||||||||||||||||||||||    
T  38504214 ttgtcaaaaaattgtagcaaaatggttgtacaaatatcatttctct 38504169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 282
Target Start/End: Complemental strand, 44712022 - 44711973
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttttt 282  Q
    ||||||||||||| ||| ||| || ||||| |||||||||||||||||||    
T  44712022 ttgtcaaaaaattattacaaattaattgtataaatatcatttctcttttt 44711973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 282
Target Start/End: Complemental strand, 45101440 - 45101391
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttttt 282  Q
    |||||||||| |||| | ||| | ||||||||||||||||||||||||||    
T  45101440 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctcttttt 45101391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 3e-38; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 346 - 602
Target Start/End: Original strand, 25170308 - 25170565
Alignment:
Q  346 caaattcgttcttgaatttgcacgaatcggacaaaaatatcctctaatttatcgaaatggctattttgtttatgaatttgtcatatatcaatcaaattag 445  Q
    ||||||||| | ||||||||||||||||| |||||||  |||  ||||| |||||||||     ||| |   |||||||||||||| |||||||||||||    
T  25170308 caaattcgtccctgaatttgcacgaatcgaacaaaaacgtcccttaattcatcgaaatgtacgctttatccttgaatttgtcatatctcaatcaaattag 25170407  T
Q  446 tccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataa-cagggactaatttggcc 544  Q
    ||||| ||| |||||| || | |||||  ||| |||||||||||||| ||||||||  |||| ||||||||||||||||||| || | ||||| |||| |    
T  25170408 tccctacgtccatttgtggcgataacggtgatgatgtggccgttaacctctcacattggttgccatgtcagatgccacataagcatgaactaaattggtc 25170507  T
Q  545 gatggcaaccaaaattttcaaggacgaaattgattgattgcataaaatgttatgcaat 602  Q
    ||| |  || |||| |||||||||||||||||||||||| || ||||| |||||||||    
T  25170508 gatagtgacaaaaaatttcaaggacgaaattgattgatttcaaaaaatattatgcaat 25170565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 666 - 808
Target Start/End: Original strand, 25170575 - 25170718
Alignment:
Q  666 aaataagtctttgaattatataaacatatatc-aatttgattctttaagcatatatgtgcagaacaaagtaaaaaagtcagaaaacgcaactttatcctt 764  Q
    ||||||||| |||||||||||||||| ||||| |||||||| ||| |||||||||| |||||||||||||||||| | |  || || |||||| ||||||    
T  25170575 aaataagtccttgaattatataaacacatatccaatttgatccttgaagcatatatttgcagaacaaagtaaaaatgactaaacacacaacttcatcctt 25170674  T
Q  765 gaaaataccatcaaataagtcataagtcttaactatgaaatatt 808  Q
    |||| |||||| |||||||||||| ||||||| | |||||||||    
T  25170675 gaaagtaccattaaataagtcatatgtcttaagtttgaaatatt 25170718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 418 - 583
Target Start/End: Complemental strand, 31210448 - 31210282
Alignment:
Q  418 tgaatttgtcatatatcaatcaaattagtccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcaga 517  Q
    ||||||||| |||| | |||||| ||||||||||||| || || |||||||||||  | | | |||||||||||| ||||||||| ||  |||||||| |    
T  31210448 tgaatttgttatatgtaaatcaatttagtccctccgtccaatttgggtgttaacggtgttgacgtggccgttaacctctcacatgggtcttcatgtcata 31210349  T
Q  518 tgccacataa-cagggactaatttggccgatggcaaccaaaattttcaaggacgaaattgattgatt 583  Q
    ||||||| || |||| |||||||||||||||   ||||||||||||||||||| |||||||||||||    
T  31210348 tgccacacaagcaggaactaatttggccgataataaccaaaattttcaaggactaaattgattgatt 31210282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 618 - 763
Target Start/End: Complemental strand, 31210118 - 31209974
Alignment:
Q  618 tttgactaactatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaatttgattctttaagcata 717  Q
    ||||||||||||||||| |||||| || |||||||||||||  |  | ||||||||| ||||||||| ||| || ||||||||||||| ||  |||||||    
T  31210118 tttgactaactatcaaatcgatccttacattatattaaaaagtcatc-aaataagtcattgaattatttaatcagatatcaatttgatcctcgaagcata 31210020  T
Q  718 tatgtgcagaacaaagtaaaaaagtcagaaaacgcaactttatcct 763  Q
    ||| || ||||||||||||||||||||||  || |||||| |||||    
T  31210019 tatatgtagaacaaagtaaaaaagtcagatgacacaacttgatcct 31209974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 433 - 834
Target Start/End: Complemental strand, 11165348 - 11164945
Alignment:
Q  433 tcaatcaaattagtccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataa-cagg 531  Q
    |||||||||||||||||| ||| ||||||||| |||||||  ||| | ||||| |||||| ||||| ||| | || || |||||| ||||||||| ||||    
T  11165348 tcaatcaaattagtccctacgtccatttggggcgttaacggggatgacgtggctgttaacatctcagatgggatgccacgtcagacgccacataagcagg 11165249  T
Q  532 gactaatttggccgatggcaaccaaaattttcaaggacgaaattgattgattgcataaaatgttatgcaatttaatctctgttatgtttgactaactatc 631  Q
    |||||| |||    ||    || |||| |||||||||||||||||||||||| || ||||| || |  |||  | ||  | |||  ||| |||  | |||    
T  11165248 gactaaattgatgtataatgacaaaaaatttcaaggacgaaattgattgatttcaaaaaatattttctaatacagtccatattaatttttacttgccatc 11165149  T
Q  632 aaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatat-caatttgattctttaagcatatatgtgcag--aa 728  Q
    |||  ||||||| |||||| | |||||| |  | ||||||||| |||||||||| |||||||| | ||| ||||| ||| | |||||||| |||||  ||    
T  11165148 aaattgatccctgaattatttcaaaaaaacgtc-aaataagtccttgaattataaaaacatattttcaagttgatccttaatgcatatatttgcagcaaa 11165050  T
Q  729 caaagtaaaaaagtcagaaaacgcaactttatccttgaaaataccatcaaataagtcataagtcttaactatgaaatattgcatagggcaaaaacaaccc 828  Q
    | || |||||| | || || || |||||| ||||||||||||| ||| ||||||||||||  |||||| | ||||||||| |||| ||||||| |||| |    
T  11165049 cgaattaaaaatgacaaaacacacaacttcatccttgaaaatatcattaaataagtcatatctcttaagtttgaaatattacata-ggcaaaagcaactc 11164951  T
Q  829 aactat 834  Q
    ||||||    
T  11164950 aactat 11164945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 628 - 739
Target Start/End: Complemental strand, 17935388 - 17935278
Alignment:
Q  628 tatcaaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatatcaatttgattctttaagcatatatgtgcaga 727  Q
    ||||||| |||| |||| ||||||| |||||||| |  ||||||| | |||||||||||||||| |||||||||||||  || | |||||||||| ||||    
T  17935388 tatcaaatcgattcctacattatatgaaaaaacc-ataaaataagcccttgaattatataaacagatatcaatttgatcattgatgcatatatgttcaga 17935290  T
Q  728 acaaagtaaaaa 739  Q
    ||||||||||||    
T  17935289 acaaagtaaaaa 17935278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 27102282 - 27102201
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctc-ttttgattggtcaaaaataat 177  Q
    ||||||| |||| |||| ||||||||| | ||||||| |||| ||||||||||||||||| |||| ||||||||||||||||    
T  27102282 gagtagtaatatttgtacaactctttggtacaactttcatgacaactttgattttctctctttttaattggtcaaaaataat 27102201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 27144104 - 27144023
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctc-ttttgattggtcaaaaataat 177  Q
    ||||||| |||| |||| ||||||||| | ||||||| |||| ||||||||||||||||| |||| ||||||||||||||||    
T  27144104 gagtagtaatatttgtacaactctttggtacaactttcatgacaactttgattttctctctttttaattggtcaaaaataat 27144023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 26391172 - 26391252
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||||| | ||||||||| |  |||||| |||| ||||||  |||||| |||||||||||||||||||||||    
T  26391172 gagtagtgatatatgaacaactctttggtataactttcatgacaactttagttttctatcttttgattggtcaaaaataat 26391252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 8778778 - 8778839
Alignment:
Q  114 taactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaata 175  Q
    ||||| |||| | |||||||||||| ||||| |||||||||||||||||||| |||||||||    
T  8778778 taactatttggtacaacttttatgacaacttagattttctctcttttgattgatcaaaaata 8778839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 15098920 - 15098840
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    |||| |||||||||||| || | |||| | |||||| ||||| ||||||||||||||||| |||||||| | |||||||||    
T  15098920 gagttgtgatatatgtacaattttttggtacaacttctatgacaactttgattttctctcatttgattgataaaaaataat 15098840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 27102159 - 27102115
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||    
T  27102159 ttgtcaaaaaattattagaaaatggttgtacaaatatcatttctc 27102115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 27143981 - 27143937
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||    
T  27143981 ttgtcaaaaaattattagaaaatggttgtacaaatatcatttctc 27143937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 289
Target Start/End: Complemental strand, 34490391 - 34490335
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttttttaattta 289  Q
    ||||| ||||||||||| ||||| |||||||||||||||||| ||| ||||||||||    
T  34490391 ttgtctaaaaattgttaaaaaatggttgtacaaatatcatttatctattttaattta 34490335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 11785399 - 11785352
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    ||||||||||||||| | ||||| ||||||||||||||||||||||||    
T  11785399 ttgtcaaaaaattgtcacaaaatggttgtacaaatatcatttctcttt 11785352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 666 - 789
Target Start/End: Original strand, 24431598 - 24431720
Alignment:
Q  666 aaataagtctttgaattatataaacatatatcaatttgattctttaagcatatatgtgcagaacaaagtaaaaaagtcagaaaacgcaactttatccttg 765  Q
    ||||||||| ||||||||| |||||| || ||||  |||| |||   ||||||||||||||||  |||||||||||| || |||| ||| || |||||||    
T  24431598 aaataagtccttgaattatttaaacaaatgtcaacgtgatccttggtgcatatatgtgcagaattaagtaaaaaagtaaggaaacccaatttgatccttg 24431697  T
Q  766 aaaataccatcaaataagtcataa 789  Q
    |  ||||||| || ||||||||||    
T  24431698 attataccat-aagtaagtcataa 24431720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 896 - 967
Target Start/End: Complemental strand, 31209846 - 31209777
Alignment:
Q  896 catcaagcatcacttctttgaaaatctgggggttggggataaactccatgaatttaggattgagtcgaaccg 967  Q
    |||||||||||||||||||| |||| | |||||| ||||||||||||| ||||||| | |||||||||||||    
T  31209846 catcaagcatcacttctttggaaatttaggggtt-gggataaactccacgaatttatg-ttgagtcgaaccg 31209777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 8778899 - 8778945
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    |||||||||| |||||| ||||| |||||||||||||||||||||||    
T  8778899 ttgtcaaaaagttgttaaaaaatggttgtacaaatatcatttctctt 8778945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 9083094 - 9083135
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    ||||||||||| ||||||||| ||||||||||||||||||||    
T  9083094 aaaaattgttaaaaaatagttatacaaatatcatttctcttt 9083135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 289
Target Start/End: Original strand, 11743009 - 11743065
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttttttaattta 289  Q
    ||||| ||||||| | | ||||||||||||||||||| |||||||||||| ||||||    
T  11743009 ttgtctaaaaattatcaaaaaatagttgtacaaatattatttctctttttcaattta 11743065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 17835656 - 17835612
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    |||||||||| |||||||||||  |||||||||||||||||||||    
T  17835656 ttgtcaaaaagttgttagaaaagggttgtacaaatatcatttctc 17835612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 19788965 - 19789045
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||||||| |||  ||||   ||||||| |||| |||| |||||||||||||| | ||||||| ||||||||    
T  19788965 gagtagtgatatatgtacaaccatttgggacaactttgatgacaactctgattttctctcttctcattggtccaaaataat 19789045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 251 - 287
Target Start/End: Complemental strand, 27334884 - 27334848
Alignment:
Q  251 aaaatagttgtacaaatatcatttctcttttttaatt 287  Q
    |||||||||||||||||||||||||||||||| ||||    
T  27334884 aaaatagttgtacaaatatcatttctctttttaaatt 27334848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 251 - 287
Target Start/End: Complemental strand, 27395624 - 27395588
Alignment:
Q  251 aaaatagttgtacaaatatcatttctcttttttaatt 287  Q
    |||||||||||||||||||||||||||||||| ||||    
T  27395624 aaaatagttgtacaaatatcatttctctttttaaatt 27395588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 28647462 - 28647506
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctc 277  Q
    ||||||||||||||| | ||||||||| |||||||||||||||||    
T  28647462 ttgtcaaaaaattgtaataaaatagttatacaaatatcatttctc 28647506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 900 - 968
Target Start/End: Complemental strand, 29114136 - 29114070
Alignment:
Q  900 aagcatcacttctttgaaaatctgggggttggggataaactccatgaatttaggattgagtcgaaccgg 968  Q
    |||||||||||||| ||||||| ||| ||| || |||||||||||||||| ||| ||||||||||||||    
T  29114136 aagcatcacttcttggaaaatccgggagtt-ggtataaactccatgaattgagg-ttgagtcgaaccgg 29114070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 32729927 - 32729884
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctcttttt 282  Q
    |||| |||| ||||||| ||||||||||||||||||||||||||    
T  32729927 aaaagttgtcagaaaatggttgtacaaatatcatttctcttttt 32729884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 3821422 - 3821376
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    ||||||||||||||| | ||| | |||||||||||||||||||||||    
T  3821422 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttctctt 3821376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 4923098 - 4923048
Alignment:
Q  127 caacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||||| |||| ||||||||||| | |||||| |||||||||    
T  4923098 caacttttatgataattttgtttttctctcttcttattggttaaaaataat 4923048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 9188971 - 9189017
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    ||||| |||| |||||| ||||| |||||||||||||||||||||||    
T  9188971 ttgtctaaaagttgttaaaaaatggttgtacaaatatcatttctctt 9189017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 15666800 - 15666846
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    |||| ||||| |||| ||||||| |||||||||||||||||||||||    
T  15666800 ttgttaaaaagttgtcagaaaatggttgtacaaatatcatttctctt 15666846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 19789103 - 19789149
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    |||||||||| |||| | ||||| |||||||||||||||||||||||    
T  19789103 ttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctctt 19789149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 237 - 279
Target Start/End: Original strand, 26391316 - 26391358
Alignment:
Q  237 caaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    |||||| |||||| ||||| |||||||||||||||||||||||    
T  26391316 caaaaagttgttaaaaaatggttgtacaaatatcatttctctt 26391358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 27335016 - 27334966
Alignment:
Q  127 caacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||| |||| ||| ||| ||||||||||||| ||||||||||||||||    
T  27335016 caactttaatgacaaccttgtttttctctctttttattggtcaaaaataat 27334966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 27395756 - 27395706
Alignment:
Q  127 caacttttatgataactttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||| |||| ||| ||| ||||||||||||| ||||||||||||||||    
T  27395756 caactttaatgacaaccttgtttttctctctttttattggtcaaaaataat 27395706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 173
Target Start/End: Original strand, 28965759 - 28965805
Alignment:
Q  127 caacttttatgataactttgattttctctcttttgattggtcaaaaa 173  Q
    |||||||  ||||||||||| || |||||||||||||||||||||||    
T  28965759 caactttggtgataactttgtttctctctcttttgattggtcaaaaa 28965805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 28965867 - 28965913
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    |||||||||| |||| | ||||| |||||||||||||||||||||||    
T  28965867 ttgtcaaaaagttgtaacaaaatggttgtacaaatatcatttctctt 28965913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 29383601 - 29383555
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    |||||||||| |||| ||||| | |||||||||||||||||||||||    
T  29383601 ttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttctctt 29383555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 275
Target Start/End: Original strand, 29643444 - 29643486
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttc 275  Q
    ||||||||||||||| ||||||| |||||||| ||||||||||    
T  29643444 ttgtcaaaaaattgtcagaaaatggttgtacatatatcatttc 29643486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 803 - 869
Target Start/End: Complemental strand, 31209914 - 31209848
Alignment:
Q  803 aatattgcatagggcaaaaacaacccaactatggagcctaattcaaacaagtctgaatattacattt 869  Q
    |||||| ||||||  ||||  |||||| |||||| || |||||||||||||||| ||||||||||||    
T  31209914 aatattacataggcaaaaagaaacccagctatggggcataattcaaacaagtctaaatattacattt 31209848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 241 - 279
Target Start/End: Complemental strand, 33656734 - 33656696
Alignment:
Q  241 aaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    ||||||||| |||||| ||||||||||||||||||||||    
T  33656734 aaattgttacaaaatatttgtacaaatatcatttctctt 33656696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 509 - 581
Target Start/End: Original strand, 17950725 - 17950798
Alignment:
Q  509 catgtcagatgccacataa-cagggactaatttggccgatggcaaccaaaattttcaaggacgaaattgattga 581  Q
    ||||||||||||||| ||  ||||||||||||||||||||    ||| |||||||||||||| || ||||||||    
T  17950725 catgtcagatgccacgtaggcagggactaatttggccgataatgacctaaattttcaaggactaagttgattga 17950798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 20712110 - 20712066
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||| |||| |||||| ||||||||||||||||||||||||||||    
T  20712110 ttgtctaaaagttgtta-aaaatagttgtacaaatatcatttctct 20712066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 25127866 - 25127907
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    |||| |||||| ||||| ||||||||||||||||||||||||    
T  25127866 aaaagttgttacaaaatggttgtacaaatatcatttctcttt 25127907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 30622068 - 30622023
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    |||| |||||||||| | ||| ||||||||||||||||||||||||    
T  30622068 ttgttaaaaaattgtaataaagtagttgtacaaatatcatttctct 30622023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 173
Target Start/End: Complemental strand, 34413230 - 34413197
Alignment:
Q  140 aactttgattttctctcttttgattggtcaaaaa 173  Q
    |||||||||||| |||||||||||||||||||||    
T  34413230 aactttgattttttctcttttgattggtcaaaaa 34413197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 59; Significance: 2e-24; HSPs: 2)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 433 - 814
Target Start/End: Original strand, 34697 - 35081
Alignment:
Q  433 tcaatcaaattagtccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataa-cagg 531  Q
    |||||||||||||||||| ||| ||||||||| |||||||  ||| | ||||| |||||| ||||| ||| | |||||| ||||| ||||||||| ||||    
T  34697 tcaatcaaattagtccctacgtccatttggggcgttaacggtgatgacgtggctgttaacatctcagatgggatgtcatatcagacgccacataatcagg 34796  T
Q  532 gactaatttggccgatggcaaccaaaattttcaaggacgaaattgattgattgcataaaatgttatgcaatttaatctctgttatgtttgactaactatc 631  Q
    |||||| |||    ||    || |||| |||||||||||||||||||||||| || ||||| || |  |||  | || || |||  ||| |||  |||||    
T  34797 gactaaattgatgtataatgacaaaaaatttcaaggacgaaattgattgatttcaaaaaatattttctaatacagtccctattaatttttacttgctatc 34896  T
Q  632 aaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatat-caatttgattctttaagcatata--tgtgcagaa 728  Q
    |||  ||||||| |||||| | ||||||  |   ||||||||| ||||||||||||||||||| | ||| ||||| ||| | |||||||  |||||| ||    
T  34897 aaattgatccctgaattatttcaaaaaaaacgtcaaataagtccttgaattatataaacatatttccaagttgatccttgatgcatatatttgtgca-aa 34995  T
Q  729 caaagtaaaaaagtcagaaaacgcaactttatccttgaaaataccatcaaataagtcataagtcttaactatgaaatattgcatag 814  Q
    | || |||||| | || || || |||||| ||||||||||||| ||| |||||||||||   |||||| | ||||||||| |||||    
T  34996 cgaattaaaaatgacaaaacacacaacttcatccttgaaaatatcattaaataagtcatgtctcttaagtttgaaatattacatag 35081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 896 - 953
Target Start/End: Original strand, 35219 - 35275
Alignment:
Q  896 catcaagcatcacttctttgaaaatctgggggttggggataaactccatgaatttagg 953  Q
    |||||||| ||||||||||| ||| | ||||||| ||||||||||||||||| |||||    
T  35219 catcaagcttcacttctttggaaagccgggggtt-gggataaactccatgaacttagg 35275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 49; Significance: 2e-18; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 433 - 836
Target Start/End: Original strand, 28439 - 28844
Alignment:
Q  433 tcaatcaaattagtccctccgttcatttggggtgttaacgacgataatgtggccgttaacttctcacatgagttgtcatgtcagatgccacataa-cagg 531  Q
    ||||||||| |||||||| ||| |||||||||||||||||  ||| ||||||| ||| || | ||| ||| |||||||||||| ||||||||||| ||||    
T  28439 tcaatcaaaatagtccctacgtccatttggggtgttaacggtgatgatgtggctgttcacatttcagatgggttgtcatgtcatatgccacataagcagg 28538  T
Q  532 gactaatttggccgatggcaaccaaaattttcaaggacgaaattgattgattgcataaaatgttatgcaatttaatctctgttatgtttgactaactatc 631  Q
    || ||| |||    ||       ||||  |||||||||||||||||| ||||  | ||||| || |  |||  | || || |||  ||| ||| |||||     
T  28539 gagtaaattgatgtataatgctaaaaaaattcaaggacgaaattgatcgattttaaaaaatattttctaataaagtccctattaattttaacttactatg 28638  T
Q  632 aaagcgatccctaaattatattaaaaaacccacgaaataagtctttgaattatataaacatatat-caatttgattctttaagcatatatgtgcagaaca 730  Q
    ||| |||||| | |||||| | ||||||||  | | ||||||| |||||||||| |||||||| | ||| ||||| |||   |||||||| |||||||      
T  28639 aaatcgatccatgaattatttaaaaaaaccgtc-acataagtccttgaattatacaaacatatttacaagttgatccttggtgcatatatttgcagaaat 28737  T
Q  731 --aagtaaaaaagtcagaaaacgcaactttatccttgaaaataccatcaaataagtcataagtcttaactatgaaatattgcatagggcaaaaacaaccc 828  Q
      || |||||| | || || || |||||| ||||||||||||||||| |||||||||||| |||||||   ||||||||| |||| ||||||| ||||||    
T  28738 tgaattaaaaatgacaaaacacacaacttcatccttgaaaataccattaaataagtcatatgtcttaaggttgaaatattacata-ggcaaaagcaaccc 28836  T
Q  829 aactatgg 836  Q
    ||||||||    
T  28837 aactatgg 28844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 282
Target Start/End: Complemental strand, 27383 - 27334
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttttt 282  Q
    ||||||||||||||| | ||||| | |||||| |||||||||||||||||    
T  27383 ttgtcaaaaaattgtcacaaaatggatgtacatatatcatttctcttttt 27334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 47; Significance: 2e-17; HSPs: 3)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 92126 - 92052
Alignment:
Q  101 agtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaata 175  Q
    ||||||||||||| ||||||||||| ||| |||||||| || |||  ||||||||||||||||||||||||||||    
T  92126 agtgatatatgtacaactctttgatacaatttttatgacaatttttgttttctctcttttgattggtcaaaaata 92052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 60513 - 60467
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    |||||||||| |||| | ||||| |||||||||||||||||||||||    
T  60513 ttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctctt 60467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #3
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 91992 - 91946
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    |||||||||| |||||||||| | ||||||||||||| |||||||||    
T  91992 ttgtcaaaaagttgttagaaagtggttgtacaaatattatttctctt 91946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 173
Target Start/End: Original strand, 26951 - 27027
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaa 173  Q
    |||||||||||| |||| | ||||||  |  ||||||||||||||||||| |||||||| || ||||||||||||||    
T  26951 gagtagtgatatttgtacatctctttcttataacttttatgataactttgtttttctcttttatgattggtcaaaaa 27027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 27090 - 27136
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 279  Q
    ||||||||| |||||||  |||| |||||||||||||||||||||||    
T  27090 ttgtcaaaagattgttaagaaatggttgtacaaatatcatttctctt 27136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 404928 - 404852
Alignment:
Q  99 gtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaata 175  Q
    |||||||||| |||| ||||||||| | |||||||||||| ||||||| ||||||||  || ||||||||| |||||    
T  404928 gtagtgatatttgtacaactctttggtacaacttttatgacaactttgtttttctcttcttcgattggtcataaata 404852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 173
Target Start/End: Complemental strand, 18185 - 18110
Alignment:
Q  97 gagtagtgatatatgtataactctttgattcaacttttatgataactttgattttctctcttttgattggtcaaaaa 173  Q
    |||||||||||| || | |||| |||||| |||||||||||| ||||||  ||||||||||||| |||||| |||||    
T  18185 gagtagtgatatttgaacaactatttgatacaacttttatgacaacttt-tttttctctcttttcattggttaaaaa 18110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 199310 - 199262
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    ||||||||||||||| | ||| | |||||||||||||||||||||||||    
T  199310 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttctctttt 199262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000006; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 482 - 569
Target Start/End: Complemental strand, 38223 - 38135
Alignment:
Q  482 tggccgttaacttctcacatgagttgtcatgtcagatgccacataa-cagggactaatttggccgatggcaaccaaaattttcaaggac 569  Q
    ||||||||||| |||||||||   || ||||||| | |||||| || ||||||||||| ||||| || |||||||| ||||||||||||    
T  38223 tggccgttaacctctcacatggactgccatgtcaaacgccacacaagcagggactaatatggccaattgcaaccaacattttcaaggac 38135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 278467 - 278514
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    ||||||||||||||||| | ||| ||||||||||||| ||||||||||    
T  278467 ttgtcaaaaaattgttacagaatggttgtacaaatataatttctcttt 278514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 36046 - 35999
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    ||||||||||||| | | ||| ||||||||||||||||||||||||||    
T  36046 ttgtcaaaaaattatcacaaagtagttgtacaaatatcatttctcttt 35999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 204478 - 204520
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctctttt 281  Q
    |||| |||| ||||||||| |||||||||||||||||||||||    
T  204478 aaaagttgtcagaaaatagatgtacaaatatcatttctctttt 204520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2089 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold2089
Description:

Target: scaffold2089; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 526 - 567
Alignment:
Q  239 aaaaattgttagaaaatagttgtacaaatatcatttctcttt 280  Q
    ||||||| ||| |||||||||| |||||||||||||||||||    
T  526 aaaaatttttaaaaaatagttgaacaaatatcatttctcttt 567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 177
Target Start/End: Original strand, 2440 - 2473
Alignment:
Q  144 ttgattttctctcttttgattggtcaaaaataat 177  Q
    ||||||||||||||||| ||||||||||||||||    
T  2440 ttgattttctctctttttattggtcaaaaataat 2473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 10762 - 10807
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||||||||||||| | ||| | ||||||||||||||||||||||    
T  10762 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttctct 10807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 9875 - 9920
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||||||||||||| | |||||  |||||||||||||||||||||    
T  9875 ttgtcaaaaaattgtgaaaaaatgattgtacaaatatcatttctct 9920  T

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Target: scaffold0032 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 17480 - 17435
Alignment:
Q  233 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 278  Q
    ||||| ||||||||| | ||||| ||||||||||||||||||||||    
T  17480 ttgtctaaaaattgtgacaaaatggttgtacaaatatcatttctct 17435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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