View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4774_high_11 (Length: 335)
Name: NF4774_high_11
Description: NF4774
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4774_high_11 |
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Alignment Details
Target: chr8 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 18 - 325
Target Start/End: Complemental strand, 2117522 - 2117215
Alignment:
| Q |
18 |
gaaatgacatcattcttctgcttgaatccatcttcacaagttgttgagtcatcaatgattgagcttagcttaatattacattcttcataacgtttggctt |
117 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2117522 |
gaaatgacatcattcttttgcttgaatccatcttcacaagttgttgagtcatcaatgattgagcttagcttaatattacattcttcataacgtttggctt |
2117423 |
T |
|
| Q |
118 |
tataatctcgaatggcttctctaaaagttgtaattgcatcggaatatacatcaagacaatcatccaagcattctttgataaaggggtctctagttttctt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2117422 |
tataatctcgaatggcttctctaaaagttgtaattgcatcggaatatacatcaagacaatcatccaagcattctttgataaaggggtctctagttttctt |
2117323 |
T |
|
| Q |
218 |
ctctaaaagctctttgatgtaatcacaagtatttgtcacattgtgccttgttatcttgatagatatgagacctaattcttcaaggtttttggcacattgg |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2117322 |
ctctaaaagctctttgatgtaatcacaagtatttgtcacattgtgccttgttatcttgatagatatgagacctaattcttcaaggtttttggcacattgg |
2117223 |
T |
|
| Q |
318 |
gtcctatg |
325 |
Q |
| |
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|||||||| |
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| T |
2117222 |
gtcctatg |
2117215 |
T |
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