View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4776-Insertion-7 (Length: 614)
Name: NF4776-Insertion-7
Description: NF4776
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4776-Insertion-7 |
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Alignment Details
Target: chr4 (Bit Score: 548; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 548; E-Value: 0
Query Start/End: Original strand, 8 - 605
Target Start/End: Original strand, 45062551 - 45063154
Alignment:
| Q |
8 |
caaatatggtaaaagtttagaaacgccaaccaccttatcatcatcatcagattagagggccaggtgcttatgatttatgagtttaagaattggcgtttat |
107 |
Q |
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| T |
45062551 |
caaatatggtaaaagtttagaaacgccaaccaccttatcatcatcatcagattagagggccaggtgcttatgatttatgagtttaagaattggcgtttat |
45062650 |
T |
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| Q |
108 |
taaaatatgattaactattgttaattaaggtaaatctttcattttcgaccagagtatattaattaatttgagtcccatgaaaacccaacaaacgattaaa |
207 |
Q |
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| T |
45062651 |
taaaatatgattaactattgttaattaaggtaaatctttcattttcgaccagagtatattaattaatttgagtaccatgaaaacccaacaaacgattaaa |
45062750 |
T |
|
| Q |
208 |
gaaaagtcatagagcccgtaggccgtagcacttttgtgcatgcatgtgaagtgaggctctttgaaagcgacgcaatgacctgaaat------gaaatact |
301 |
Q |
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| T |
45062751 |
gaaaagtcatagagcccgtaggccgtagcacttttgtgcatgcatgtgaagtgaggctctttgaaagcgacgcaatgacctgaaatgaaatagaaatact |
45062850 |
T |
|
| Q |
302 |
atgaaaaagtattaatttcacactgctannnnnnnatatactctatagtctatactgctaactatgctagagtttgtttaaattagttgtaaacagtact |
401 |
Q |
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| T |
45062851 |
atgaaaaagtattaatttcacactgctatttttttatatactctatagtctataatgctaactatgctagagtttgtttaaattagttgtaaacagtact |
45062950 |
T |
|
| Q |
402 |
acttaaacattgtttttagagcaaagcaatacttaaacatagtataactataaatgaatattcaaatattaacctatacaaaatcaatcttagtcatttg |
501 |
Q |
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| T |
45062951 |
acttaaacattgtttttagagcaaagcaatacttaaacatagtataactataaatgaatattcaaatattaacctatacaaaatcaatcttagtcatttg |
45063050 |
T |
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| Q |
502 |
tatgtatataattaaaatgtattttttatccttcacactttcatctttcacaaatatgaacactttttgttttaataaatatttaacctcttaattctgt |
601 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45063051 |
tatgtatataattaaaatctattttttatccttcacactttcatctttcacaaatatgaacactttttgttttaataaatatttaacctcttaattctgt |
45063150 |
T |
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| Q |
602 |
gtac |
605 |
Q |
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|||| |
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| T |
45063151 |
gtac |
45063154 |
T |
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