View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4777-Insertion-10 (Length: 578)
Name: NF4777-Insertion-10
Description: NF4777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4777-Insertion-10 |
 | |
|
| [»] chr6 (11 HSPs) |
| |
|
Alignment Details
Target: chr6 (Bit Score: 560; Significance: 0; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 560; E-Value: 0
Query Start/End: Original strand, 7 - 578
Target Start/End: Complemental strand, 6496974 - 6496403
Alignment:
| Q |
7 |
aagaatctcgtgatgaaatcatttcatcacttgtaaaagatgttggcggtctagattcattgaaaataacaacgaaggattcttactcttatggtaaatt |
106 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6496974 |
aagaatctcgtgatgaaatcgtttcatcacttgtaaaagatgttggcagtctagattcattgaaaataacaacgaaggattcttactcttatggtaaatt |
6496875 |
T |
|
| Q |
107 |
gattggaagggcggcgaggtttgcattgatagccgaagaggtttcatacttagatgtgattccaaaggttaagaagtttttgaaagaaaccattgagcct |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6496874 |
gattggaagggcggcgaggtttgcattgatagccgaagaggtttcatacttagatgtgattccaaaggttaagaagtttttgaaagaaaccattgagcct |
6496775 |
T |
|
| Q |
207 |
tggttagatggaactttaaatgggaatggatttctacaagatgataaatggggtggcattgttaccatacaagggtctgttgattctaacgctgattccg |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
6496774 |
tggttagatggaactttaaatgggaatggatttctacaagatgataaatggggtggcattgttaccatacaagggtctgttgattctaatgctgattccg |
6496675 |
T |
|
| Q |
307 |
gtttcggaatctataatgatcatgctgatcacttaggatactttctttatggaattgctgttcttactaagattgacactgcatggggtgagaaatataa |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6496674 |
gtttcggaatctataatgatcatgctgatcacttaggatactttctttatggaattgctgttcttactaagattgacactgcatggggtgagaaatataa |
6496575 |
T |
|
| Q |
407 |
gtctgcggcctattcacttatgaaagattttatgaacttgaactcgggaccagactccgatgacacacgtttaagatattatgatctttatcatggccac |
506 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6496574 |
gtctgcggcctattcacttatgaaagattttatgaacttgaactcgggaccagactccgatgacacacgtttaagatattatgatctttatcatggccac |
6496475 |
T |
|
| Q |
507 |
aatcatagtccagggttaattcagtataaagatggaagaaaccataagagcacaagtcaagctgcaaatgca |
578 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6496474 |
aatcatagtccagggttaattcagtataaagatggaagaaaccataagagcacaagtcaagctgcaaatgca |
6496403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 384; E-Value: 0
Query Start/End: Original strand, 7 - 578
Target Start/End: Original strand, 6461698 - 6462269
Alignment:
| Q |
7 |
aagaatctcgtgatgaaatcatttcatcacttgtaaaagatgttggcggtctagattcattgaaaataacaacgaaggattcttactcttatggtaaatt |
106 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||| |||||||| || || ||||||||||||||||||||||| |
|
|
| T |
6461698 |
aagaatctcgtgatgaaatcgtttcatcacttttaaaagatgttgagggtctagattcatcaaaaataaccacaaaagattcttactcttatggtaaatt |
6461797 |
T |
|
| Q |
107 |
gattggaagggcggcgaggtttgcattgatagccgaagaggtttcatacttagatgtgattccaaaggttaagaagtttttgaaagaaaccattgagcct |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
6461798 |
gattggaagggcggcgaggtttgcattgatagctgaagaggtttcttacttagatgtgattccaaaggttaagaagtttttaaaagaaaccattgagcct |
6461897 |
T |
|
| Q |
207 |
tggttagatggaactttaaatgggaatggatttctacaagatgataaatggggtggcattgttaccatacaagggtctgttgattctaacgctgattccg |
306 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||| |||| |
|
|
| T |
6461898 |
tggttagatggaactttaaatgggaatggatttctacaagatgataaatggggtggcattgttaccgaacaagggtctatggattctaacgctgactccg |
6461997 |
T |
|
| Q |
307 |
gtttcggaatctataatgatcatgctgatcacttaggatactttctttatggaattgctgttcttactaagattgacactgcatggggtgagaaatataa |
406 |
Q |
| |
|
|||||||||| |||| |||||| |||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| || |
|
|
| T |
6461998 |
gtttcggaatttatagtgatcaccctgatcacttgggatactttctttatggaattgcagttcttacaaagattgacactgcatggggtgagaaatacaa |
6462097 |
T |
|
| Q |
407 |
gtctgcggcctattcacttatgaaagattttatgaacttgaactcgggaccagactccgatgacacacgtttaagatattatgatctttatcatggccac |
506 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||| |||| |||||||| ||| |||||| |
|
|
| T |
6462098 |
gtcgaaggcctattcacttatgaaagattttatgaacttggactcaggaccagactccgatgacccacgtcaaagagattatgattacgttcaaggccac |
6462197 |
T |
|
| Q |
507 |
aatcatagtccagggttaattcagtataaagatggaagaaaccataagagcacaagtcaagctgcaaatgca |
578 |
Q |
| |
|
|| || ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
6462198 |
cattatgctccagggttaattcaacataaagatggaagaaaccataagagcacaagccaagctgcaaatgca |
6462269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 87 - 382
Target Start/End: Complemental strand, 6465554 - 6465259
Alignment:
| Q |
87 |
tcttactcttatggtaaattgattggaagggcggcgaggtttgcattgatagccgaagaggtttcatacttagatgtgattccaaaggttaagaagtttt |
186 |
Q |
| |
|
||||||| |||||| || ||||||| ||||| || ||||| || ||||| || |||||||||| | | | ||||||||||| || ||| |||||||| |
|
|
| T |
6465554 |
tcttacttttatggcaagttgattgctagggctgctaggttggctttgattgctgaagaggtttgtttccttgatgtgattccgaaaattaggaagtttt |
6465455 |
T |
|
| Q |
187 |
tgaaagaaaccattgagccttggttagatggaactttaaatgggaatggatttctacaagatgataaatggggtggcattgttaccatacaagggtctgt |
286 |
Q |
| |
|
|||| ||||| |||||||||||| | ||||||||||| ||||| ||||||||||| | |||| |||||||| || |||||||||| |||||||||| |
|
|
| T |
6465454 |
tgaaggaaactattgagccttggcttgatggaacttttaatggaaatggatttctctatgatggaaaatggggaggaattgttaccaaacaagggtctaa |
6465355 |
T |
|
| Q |
287 |
tgattctaacgctgattccggtttcggaatctataatgatcatgctgatcacttaggatactttctttatggaattgctgttcttactaagattga |
382 |
Q |
| |
|
|||| || ||||||| || |||||| | |||||||||||| | |||| |||||||||||||| |||||||||||||| ||| | |||||||| |
|
|
| T |
6465354 |
tgatactggtgctgattttggattcggagtttataatgatcatcattatcatttaggatactttctctatggaattgctgtgcttgcaaagattga |
6465259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 87 - 447
Target Start/End: Original strand, 6473000 - 6473360
Alignment:
| Q |
87 |
tcttactcttatggtaaattgattggaagggcggcgaggtttgcattgatagccgaagaggtttcatacttagatgtgattccaaaggttaagaagtttt |
186 |
Q |
| |
|
||||||| |||||| |||||||| | |||||| |||||||| |||||||||||||||||||| ||| | |||| ||||||| || ||||| | || |
|
|
| T |
6473000 |
tcttacttttatggaaaattgatagcaagggctgcgaggttagcattgatagccgaagaggtgaattaccttgatgcaattccaattgtgaagaaatatt |
6473099 |
T |
|
| Q |
187 |
tgaaagaaaccattgagccttggttagatggaactttaaatgggaatggatttctacaagatgataaatggggtggcattgttaccatacaagggtctgt |
286 |
Q |
| |
|
|||| ||| ||| ||||||||| | |||||||| || ||||| ||||||||||| | ||| | |||||||| || ||| | |||| |||||| ||| |
|
|
| T |
6473100 |
tgaaggaatccaccgagccttggctcgatggaacatttaatggaaatggatttctctatgataaaaaatggggaggtattataaccaaacaaggttctac |
6473199 |
T |
|
| Q |
287 |
tgattctaacgctgattccggtttcggaatctataatgatcatgctgatcacttaggatactttctttatggaattgctgttcttactaagattgacact |
386 |
Q |
| |
|
|||| | ||||||| ||| |||||||| |||||||||||| | |||| ||||| |||||||| ||||||||||| || ||| |||||||||| | |
|
|
| T |
6473200 |
tgataccggtgctgatttcgggttcggaatttataatgatcatcattatcatttaggttactttctctatggaattgcagtgcttgctaagattgatcca |
6473299 |
T |
|
| Q |
387 |
gcatggggtgagaaatataagtctgcggcctattcacttatgaaagattttatgaacttga |
447 |
Q |
| |
|
| |||||| ||||||||||| || |||||| |||| ||| |||||||||||| ||||| |
|
|
| T |
6473300 |
gtttggggtaagaaatataagcctcaagcctatgcactcatggaagattttatgaccttga |
6473360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 95 - 382
Target Start/End: Complemental strand, 6526585 - 6526298
Alignment:
| Q |
95 |
ttatggtaaattgattggaagggcggcgaggtttgcattgatagccgaagaggtttcatacttagatgtgattccaaaggttaagaagtttttgaaagaa |
194 |
Q |
| |
|
|||||| |||||||||| ||| || || || ||||||||||||| |||||||||| | | | |||||||||||||| |||| |||| |||||| ||| |
|
|
| T |
6526585 |
ttatggaaaattgattgcaagagctgcaagacttgcattgatagcggaagaggtttgtttccttgatgtgattccaaaagttagaaagtatttgaaggaa |
6526486 |
T |
|
| Q |
195 |
accattgagccttggttagatggaactttaaatgggaatggatttctacaagatgataaatggggtggcattgttaccatacaagggtctgttgattcta |
294 |
Q |
| |
|
||||||||||||||| | ||||||||||| ||||| ||||||||||| | ||| | |||||||| | ||||| |||| ||| || ||| || | |
|
|
| T |
6526485 |
accattgagccttggcttgatggaacttttaatggaaatggatttctttatgataaaaaatggggagatattgtaaccaaacatggttctacaaatgccg |
6526386 |
T |
|
| Q |
295 |
acgctgattccggtttcggaatctataatgatcatgctgatcacttaggatactttctttatggaattgctgttcttactaagattga |
382 |
Q |
| |
|
||||||| || |||||| | |||||||||||| | |||| |||||||||||||| ||||||||||| || ||| |||||||||| |
|
|
| T |
6526385 |
gtgctgattttgggttcggagtttataatgatcatcattatcatttaggatactttctctatggaattgcagtgcttgctaagattga |
6526298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 95 - 445
Target Start/End: Complemental strand, 6505693 - 6505343
Alignment:
| Q |
95 |
ttatggtaaattgattggaagggcggcgaggtttgcattgatagccgaagaggtttcatacttagatgtgattccaaaggttaagaagtttttgaaagaa |
194 |
Q |
| |
|
|||||| ||||| |||| ||| || || ||| ||||||||||||| |||||||||| | ||| |||| ||| ||| || | || |||||||| ||| |
|
|
| T |
6505693 |
ttatggaaaattaattgcaagagcagctaggcttgcattgatagctgaagaggttttcttctttgatgctattgaaaaagtaagaaactttttgaaggaa |
6505594 |
T |
|
| Q |
195 |
accattgagccttggttagatggaactttaaatgggaatggatttctacaagatgataaatggggtggcattgttaccatacaagggtctgttgattcta |
294 |
Q |
| |
|
||||||||||||||| | ||||||||||| ||||| |||||||||||| | ||| | |||||||| || || |||| |||||||||| |||| | |
|
|
| T |
6505593 |
accattgagccttggcttgatggaacttttaatggaaatggatttctatatgataaaaaatggggaggacttattactcaacaagggtctaatgatggtg |
6505494 |
T |
|
| Q |
295 |
acgctgattccggtttcggaatctataatgatcatgctgatcacttaggatactttctttatggaattgctgttcttactaagattgacactgcatgggg |
394 |
Q |
| |
|
| ||||| |||||||||||| || ||||||||| |||||||||||| |||||||| | ||| || || ||| ||||| || | ||||||| |
|
|
| T |
6505493 |
gtggtgatttcggtttcggaatttacaatgatcatcactttcacttaggatattttctttacgcaatagcagtgcttgtaaagatcgatccaacatgggg |
6505394 |
T |
|
| Q |
395 |
tgagaaatataagtctgcggcctattcacttatgaaagattttatgaactt |
445 |
Q |
| |
|
| |||||||||| || |||||||||||| || |||||||||||||||| |
|
|
| T |
6505393 |
taggaaatataaggctcaagcctattcacttgtggaagattttatgaactt |
6505343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 364
Target Start/End: Original strand, 13035699 - 13035976
Alignment:
| Q |
87 |
tcttactcttatggtaaattgattggaagggcggcgaggtttgcattgatagccgaagaggtttcatacttagatgtgattccaaaggttaagaagtttt |
186 |
Q |
| |
|
||||||| |||||| |||||||| | ||| || || ||||| ||||||||| | |||||||| ||| | |||| ||||||| || ||||||| | |
|
|
| T |
13035699 |
tcttacttttatggaaaattgatagcaagagctgcaaggttagcattgataactgaagaggtgaattaccttgatgcaattccaattgtgaagaagtact |
13035798 |
T |
|
| Q |
187 |
tgaaagaaaccattgagccttggttagatggaactttaaatgggaatggatttctacaagatgataaatggggtggcattgttaccatacaagggtctgt |
286 |
Q |
| |
|
|||| ||| |||||||||||||| | ||||||||||| ||||| ||||||||||| | ||| | |||||||| || ||| | || | |||||| ||| |
|
|
| T |
13035799 |
tgaaggaatccattgagccttggcttgatggaacttttaatggaaatggatttctctatgataaaaaatggggaggtattataacgaaacaaggttctac |
13035898 |
T |
|
| Q |
287 |
tgattctaacgctgattccggtttcggaatctataatgatcatgctgatcacttaggatactttctttatggaattgc |
364 |
Q |
| |
|
|||| | ||||||| ||| || ||||| |||||||| ||| | |||| ||||| |||||||| ||||||||||| |
|
|
| T |
13035899 |
tgataccggtgctgatttcgggtttggaatttataatgaccatcattatcatttaggttactttctctatggaattgc |
13035976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 382
Target Start/End: Complemental strand, 6528330 - 6528119
Alignment:
| Q |
171 |
aaggttaagaagtttttgaaagaaaccattgagccttggttagatggaactttaaatgggaatggatttctacaagatgataaatggggtggcattgtta |
270 |
Q |
| |
|
||||||||||||| |||||| || | |||||||||||| | ||||||||||| || || ||||||||||| | ||| | |||||||| || ||| ||| |
|
|
| T |
6528330 |
aaggttaagaagtatttgaaggagatgattgagccttggcttgatggaactttcaaaggtaatggatttctctatgataaaaaatggggagggattatta |
6528231 |
T |
|
| Q |
271 |
ccatacaagggtctgttgattctaacgctgattccggtttcggaatctataatgatcatgctgatcacttaggatactttctttatggaattgctgttct |
370 |
Q |
| |
|
| | |||||| ||| |||||| || ||||| | ||||| ||||| |||||| ||||| || | || ||||| ||| |||||| ||||||||| || |
|
|
| T |
6528230 |
caaaacaaggctctactgattcaaatgctgagtatggttttggaatttataataatcatcatggtactttgggatattttgtttatgcaattgctgtgct |
6528131 |
T |
|
| Q |
371 |
tactaagattga |
382 |
Q |
| |
|
| |||||||||| |
|
|
| T |
6528130 |
tgctaagattga |
6528119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 278
Target Start/End: Complemental strand, 6523542 - 6523423
Alignment:
| Q |
159 |
gatgtgattccaaaggttaagaagtttttgaaagaaaccattgagccttggttagatggaactttaaatgggaatggatttctacaagatgataaatggg |
258 |
Q |
| |
|
||||||||| |||| ||||| |||| ||||||||| | ||||||||||||| | ||||||||||| || |||||||||||| | ||| | ||||||| |
|
|
| T |
6523542 |
gatgtgatttcaaaagttaaaaagtatttgaaagagatcattgagccttggcttgatggaactttcaaataaaatggatttctatatgatcagaaatggg |
6523443 |
T |
|
| Q |
259 |
gtggcattgttaccatacaa |
278 |
Q |
| |
|
| | |||||||||| |||| |
|
|
| T |
6523442 |
gagatattgttaccaaacaa |
6523423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 445
Target Start/End: Original strand, 6516295 - 6516422
Alignment:
| Q |
318 |
tataatgatcatgctgatcacttaggatactttctttatggaattgctgttcttactaagattgacactgcatggggtgagaaatataagtctgcggcct |
417 |
Q |
| |
|
|||||||||||| | |||| |||||||| ||||||||||||||||| || ||| ||||||||| | ||||||||| ||| |||||| ||| |
|
|
| T |
6516295 |
tataatgatcatcattatcaattaggatattttctttatggaattgcagtgcttgttaagattgatccagcatggggtaggaagtataagaaacaatcct |
6516394 |
T |
|
| Q |
418 |
attcacttatgaaagattttatgaactt |
445 |
Q |
| |
|
||||||||||| |||| ||||||||||| |
|
|
| T |
6516395 |
attcacttatggaagactttatgaactt |
6516422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 382
Target Start/End: Complemental strand, 6457372 - 6457299
Alignment:
| Q |
309 |
ttcggaatctataatgatcatgctgatcacttaggatactttctttatggaattgctgttcttactaagattga |
382 |
Q |
| |
|
||||| || |||||||||||| | |||| |||||||||||||| ||||||||||| || ||| | |||||||| |
|
|
| T |
6457372 |
ttcggtatttataatgatcatcattatcatttaggatactttctctatggaattgcagtgcttgcaaagattga |
6457299 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 90 - 279
Target Start/End: Original strand, 9665259 - 9665454
Alignment:
| Q |
90 |
tactcttatggtaaattgattggaagggcggcgaggtttgcattgatagccgaagaggtttcatacttagatgtgattccaaaggttaa------gaagt |
183 |
Q |
| |
|
|||| |||||| |||||||||| ||| || || ||| ||||||||||||| ||||| |||| | ||| ||| || ||||||| ||||| ||||| |
|
|
| T |
9665259 |
tacttttatggaaaattgattgcaagagcagctaggcttgcattgatagctgaagacgtttttttctttgatatggttccaaatgttaagattaagaagt |
9665358 |
T |
|
| Q |
184 |
ttttgaaagaaaccattgagccttggttagatggaactttaaatgggaatggatttctacaagatgataaatggggtggcattgttaccatacaag |
279 |
Q |
| |
|
||||||||||||| ||||| || ||||| ||||||||||| || | ||||||||||| | ||| | |||||||| || ||||| |||| ||||| |
|
|
| T |
9665359 |
ttttgaaagaaactattgaaccgtggtttgatggaactttcaaagaaaatggatttctgtatgatcagaaatggggaggaattgtaaccaaacaag |
9665454 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 3754004 - 3754080
Alignment:
| Q |
306 |
ggtttcggaatctataatgatcatgctgatcacttaggatactttctttatggaattgctgttcttactaagattga |
382 |
Q |
| |
|
||||| ||||| |||||||||||| | |||| ||||| || |||||||||||||||||||||||| | |||||||| |
|
|
| T |
3754004 |
ggttttggaatttataatgatcatcattatcatttaggttattttctttatggaattgctgttcttgcaaagattga |
3754080 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 90 - 279
Target Start/End: Original strand, 13536283 - 13536478
Alignment:
| Q |
90 |
tactcttatggtaaattgattggaagggcggcgaggtttgcattgatagccgaagaggtttcatacttagatgtgattccaaaggttaa------gaagt |
183 |
Q |
| |
|
|||| |||||| |||||||||| ||| || || ||| ||||||||||||| ||||| |||| | ||| ||| || ||||||| ||||| ||||| |
|
|
| T |
13536283 |
tacttttatggaaaattgattgcaagagcagctaggcttgcattgatagctgaagacgtttttttctttgatatggttccaaatgttaagattaagaagt |
13536382 |
T |
|
| Q |
184 |
ttttgaaagaaaccattgagccttggttagatggaactttaaatgggaatggatttctacaagatgataaatggggtggcattgttaccatacaag |
279 |
Q |
| |
|
||||||||||||| ||||| || ||||| ||||||||||| || | ||||||||||| | ||| | |||||||| || ||||| |||| ||||| |
|
|
| T |
13536383 |
ttttgaaagaaactattgaaccgtggtttgatggaactttcaaagaaaatggatttctgtatgatcagaaatggggaggaattgtaaccaaacaag |
13536478 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 218
Target Start/End: Original strand, 35231426 - 35231521
Alignment:
| Q |
123 |
aggtttgcattgatagccgaagaggtttcatacttagatgtgattccaaaggttaagaagtttttgaaagaaaccattgagccttggttagatgga |
218 |
Q |
| |
|
||||| || |||||||| |||||||||| | | | |||||||||||||| |||||||||| ||||||||| | ||||||||||||| | |||||| |
|
|
| T |
35231426 |
aggttggctttgatagctgaagaggtttgtttccttgatgtgattccaaaagttaagaagtatttgaaagagatcattgagccttggcttgatgga |
35231521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 132 - 223
Target Start/End: Original strand, 35243075 - 35243166
Alignment:
| Q |
132 |
ttgatagccgaagaggtttcatacttagatgtgattccaaaggttaagaagtttttgaaagaaaccattgagccttggttagatggaacttt |
223 |
Q |
| |
|
|||||||| |||||||||| | ||| |||||||||||||| |||||||||| ||||||||| |||||||| |||| | ||||||||||| |
|
|
| T |
35243075 |
ttgatagctgaagaggtttgtttctttgatgtgattccaaaagttaagaagtatttgaaagaggtcattgagctttggcttgatggaacttt |
35243166 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 447
Target Start/End: Original strand, 35244309 - 35244342
Alignment:
| Q |
414 |
gcctattcacttatgaaagattttatgaacttga |
447 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| |
|
|
| T |
35244309 |
gcctattcactcatgaaagattttatgaacttga |
35244342 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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