View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4778-Insertion-15 (Length: 243)
Name: NF4778-Insertion-15
Description: NF4778
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4778-Insertion-15 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 7 - 243
Target Start/End: Complemental strand, 2056508 - 2056272
Alignment:
| Q |
7 |
actattagtgaaagaaattgcataatttgaatcttgtatcaagctactaacgaaaatgatattgacacataactcaagaatgtnnnnnnncattatgaag |
106 |
Q |
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| T |
2056508 |
actattagtgaaagaaattgcataatttgaatcttgtatcaagctactaacaaaaatgatattgacataaaactcaagaatgtaaaaaaacattatgaag |
2056409 |
T |
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| Q |
107 |
aactaaattattacctagtgagacaaaaccaatggcaaacataggagcaataggtccaaaatcaatgatccatttgagctgcatatatatttaatcattc |
206 |
Q |
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| T |
2056408 |
aactaaattattacctagtgagacaaaaccaatggcaaacataggagcaataggtccaaaatcaatgatccatttgagctgcatatatatttaatcatcc |
2056309 |
T |
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| Q |
207 |
actcatacatactcatgttgattcatcatcacatctt |
243 |
Q |
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| T |
2056308 |
actcatacatactcatattgattcatcatcacatctt |
2056272 |
T |
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