View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4778_high_35 (Length: 255)
Name: NF4778_high_35
Description: NF4778
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4778_high_35 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 13 - 255
Target Start/End: Original strand, 3297459 - 3297701
Alignment:
| Q |
13 |
cataggtaaactctgatcaataatgaaatggcagtgcttcttactggttattgtgaaacgagcttgtcaattgtcatatgcagaatattgtatttttgta |
112 |
Q |
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| T |
3297459 |
cataggtaaactctgatcaatagtgaaatggcagtgtttcttacaggttattgtgaaacgagcttgtcaattgtcatatgcagaatattgtatttttgta |
3297558 |
T |
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| Q |
113 |
gaaacgtgtgattattgtacagtaacaaataagatacttcaagttgatttttgatattttttaataaaggtcatgttaacaaatatttattgtttaagga |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3297559 |
gaaacgtgtgattattgtacagtaacaaataagatacttcaagttgatttttgatattttttaataaaggtcatgttaacaaatatttattgtttaagga |
3297658 |
T |
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| Q |
213 |
aaatctataataagaatttcatctaaaaaatataaatcacata |
255 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3297659 |
aaatctataataagaatttcatctaaaaaatataaatcacata |
3297701 |
T |
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