View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4778_high_40 (Length: 237)
Name: NF4778_high_40
Description: NF4778
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4778_high_40 |
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Alignment Details
Target: chr5 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 8792585 - 8792806
Alignment:
| Q |
1 |
ataccttgcttgtgaacaatattgtttgtagaaccgttgcaagaaataattttgaggatcatgcaatatagatgaaaccaactttatcaatttcctgaat |
100 |
Q |
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| T |
8792585 |
ataccttgcttgtgaacaatattgtttgtagaaccgttgcaagaaataattttgaggatcatgcaatatagatgaaaccgagtttatcaatttcctgaat |
8792684 |
T |
|
| Q |
101 |
ttgattgtgaatattcaataatcagtagcttatgtttcgagtcggattttagatgagatatggcctgaaaatggggaccaaactcatgcatgagctatca |
200 |
Q |
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| T |
8792685 |
ttgattgtgaatattcaataatcagtagcttatgtttcgagtcggattttagatgagatatggcctgaaaatgaggaccaaactcatgcatgagctatca |
8792784 |
T |
|
| Q |
201 |
ggttacaagcaggggtgagatt |
222 |
Q |
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||||| |||||||||||||||| |
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| T |
8792785 |
ggttagaagcaggggtgagatt |
8792806 |
T |
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