View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4779-Insertion-5 (Length: 719)
Name: NF4779-Insertion-5
Description: NF4779
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4779-Insertion-5 |
 | |
|
| [»] chr1 (13 HSPs) |
| |
|
| [»] scaffold0690 (2 HSPs) |
| | |
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Alignment Details
Target: chr1 (Bit Score: 597; Significance: 0; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 597; E-Value: 0
Query Start/End: Original strand, 7 - 719
Target Start/End: Complemental strand, 8928028 - 8927316
Alignment:
| Q |
7 |
aattggcacaagtaattctctctcacatgtggtccttctatccatgacaccaacacctaccttcataaatatccaaacttgcaaaaattaaagtgccata |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
8928028 |
aattggcacaagtaattctctctcacatgtggtccttctatccatgacaccaacacctaccttcataaatatccaaacttgcaaaaataaaagtgccata |
8927929 |
T |
|
| Q |
107 |
atttatccttctttaatttttagaataagaaaattcatggagattaacatatctgatacttaaaattcaatcaaaagaactaatgggtacaaatattttt |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8927928 |
atttatccttctttaatttttagaataagaaaattcatggagattaacatatctgatacataaaattcaatcaaaagaactaatgggtacaaatattttt |
8927829 |
T |
|
| Q |
207 |
aattttnnnnnnnnnnnnnnnnnctatattaatacaaagacattttacttccaagacattcaactctacactacttcaattttaacagtatattgctgaa |
306 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8927828 |
aattttaaaaaataaaaaataaactatattaatccaaagacattttacttccaagacattcaactctacactacttcaattttaacagtatattgctgaa |
8927729 |
T |
|
| Q |
307 |
ttggccattatatctttacaacattcaagttgccatattaattctataatctagtctaattcttgaatgacatctagttctacattcagacatcctggaa |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8927728 |
ttggccattatatctttacaacattcaagttgccatattaattctataatctagtctaattcttgaatgacatctagttctacattcagacatcctggaa |
8927629 |
T |
|
| Q |
407 |
ctgtatttacagttctattacttgatgatgaagcattgaaaggatttgtgggaacttttaatttgtctccctctccttgaagcatctgcaccacagtttt |
506 |
Q |
| |
|
| |||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8927628 |
cagtatttacagttctattagttgatactgaagcattgaaaggattggtgggaacttttaatttgtctccctctccttgaagcatctgcaccacagtttt |
8927529 |
T |
|
| Q |
507 |
catggacggccgatgcacggagtgccactgaatgcaccaaagtccgacaattgctagnnnnnnngcaattctaaaatctccctcttcatcgattgggata |
606 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
8927528 |
catggacggccgatgcacggagtgccactgaatgcaccaaagtccgacaattgctagtttttttgcaattctacaatctccctcttcatcaattgggata |
8927429 |
T |
|
| Q |
607 |
tatacgtctccaccttcaaataaaccatggatccaatctggatacagaacttggaaattttcttcgccaccagtagttgttttagtattctttcttcctc |
706 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8927428 |
tatacgtctccaccttcaagtaaaccatggatccaatctggatacagaacttggaaattttcttcgccaccagtagttgttttagtattctttcttcctc |
8927329 |
T |
|
| Q |
707 |
caaccatctctag |
719 |
Q |
| |
|
||||||||||||| |
|
|
| T |
8927328 |
caaccatctctag |
8927316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 352 - 716
Target Start/End: Complemental strand, 8940106 - 8939745
Alignment:
| Q |
352 |
ataatctagtctaattcttgaatgacatctagttctacattcagacatcctggaactgtatttacagttctattacttgatgatgaagcattgaaaggat |
451 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||| ||||| |||||| | ||| |||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
8940106 |
ataatctagtctaattcctgaataacatctagttctgaattcaaacatccggcaacagtatttacagttctattagttgatgatgaagcattgaaaggat |
8940007 |
T |
|
| Q |
452 |
ttgtgggaacttttaatttgtctccctctccttgaagcatctgcaccacagttttcatggacggccgatgcacggagtgccactgaatgcaccaaagtcc |
551 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
8940006 |
tggtgggaacttttaatttgtctccctctccttgaagcatctgaaccacagatttcatggacggtcgatgcacggagtgccactgaatgcaccaaagtcc |
8939907 |
T |
|
| Q |
552 |
gacaattgctagnnnnnnngcaattctaaaatctccctcttcatcgattgggatatatacgtctccaccttcaaataaaccatggatccaatctggatac |
651 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8939906 |
gacaatcgctagtttctttgcaattctaaaatctccctcttcatcaattgggatatatacgtctccaccttcaaataaaccatggatccaatctggatac |
8939807 |
T |
|
| Q |
652 |
agaacttggaaattttcttcgccaccagtagttgttttagtattctttcttcctccaaccatctc |
716 |
Q |
| |
|
| ||||| |||||||||| |||| || ||| ||||||||||||||||||||||||||||| |
|
|
| T |
8939806 |
aatacttgaaaattttctt---cacctgtgactgtcttagtattctttcttcctccaaccatctc |
8939745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 366 - 716
Target Start/End: Complemental strand, 8963019 - 8962672
Alignment:
| Q |
366 |
ttcttgaatgacatctagttctacattcagacatcctggaactgtatttacagttctattacttgatgatgaagcattgaaaggatttgtgggaactttt |
465 |
Q |
| |
|
||||||||| |||||||||||| ||| | | || ||| | |||||| | | |||| ||| |||| |||||| ||||||||||||| |||||||||||| |
|
|
| T |
8963019 |
ttcttgaatcacatctagttctgaattgaaatattctgtagctgtatatgcggttccgttagttgaagatgaatcattgaaaggattggtgggaactttt |
8962920 |
T |
|
| Q |
466 |
aatttgtctccctctccttgaagcatctgcaccacagttttcatggacggccgatgcacggagtgccactgaatgcaccaaagtccgacaattgctagnn |
565 |
Q |
| |
|
|| |||||| |||||| || |||||||||||||| ||||||||| || |||||||| || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
8962919 |
aacttgtctaactctccatgtagcatctgcaccaccattttcatggctggtcgatgcactgaatgccactgaatgcaccaaagtccgacaattgctagtt |
8962820 |
T |
|
| Q |
566 |
nnnnngcaattctaaaatctccctcttcatcgattgggatatatacgtctccaccttcaaataaaccatggatccaatctggatacagaacttggaaatt |
665 |
Q |
| |
|
||||||||| ||||||| |||||||| || ||||||| || ||||| |||||||| ||||| ||||||||||||||||||| |||||| ||||| |
|
|
| T |
8962819 |
tctttgcaattctataatctccatcttcatcaatagggatatgtatatctcccccttcaaacaaaccgtggatccaatctggatacaaaacttgaaaatt |
8962720 |
T |
|
| Q |
666 |
ttcttcgccaccagtagttgttttagtattctttcttcctccaaccatctc |
716 |
Q |
| |
|
||||| || | || ||| |||||||||||||||||||| |||||||| |
|
|
| T |
8962719 |
ttctt---catctgtgactgtcttagtattctttcttcctccgaccatctc |
8962672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 445 - 716
Target Start/End: Original strand, 9466205 - 9466473
Alignment:
| Q |
445 |
aaaggatttgtgggaacttttaatttgtctccctctccttgaagcatctgcaccacagttttcatggacggccgatgcacggagtgccactgaatgcacc |
544 |
Q |
| |
|
|||||||| |||| |||||||| |||||||| || ||||| ||||| || | ||||||||||||||| || ||||||| | |||||||| ||||||| |
|
|
| T |
9466205 |
aaaggattgctggggacttttaacttgtctccatcaccttgtagcatttgtatcacagttttcatggatggacgatgcataggttgccactggatgcacc |
9466304 |
T |
|
| Q |
545 |
aaagtccgacaattgctagnnnnnnngcaattctaaaatctccctcttcatcgattgggatatatacgtctccaccttcaaataaaccatggatccaatc |
644 |
Q |
| |
|
|||||| ||||| || | | ||| || |||||||||||||| || || ||||| | || |||||| ||||||| ||| | ||||||||||| |
|
|
| T |
9466305 |
gaagtccaacaatcgccattttttttggaatcctgaaatctccctcttcgtcaatagggatttgtatgtctcccccttcaagcaaatcgtggatccaatc |
9466404 |
T |
|
| Q |
645 |
tggatacagaacttggaaattttcttcgccaccagtagttgttttagtattctttcttcctccaaccatctc |
716 |
Q |
| |
|
|||||| |||||||| |||||||||| |||| || ||||| || ||||||||||||||| |||||||||| |
|
|
| T |
9466405 |
tggatatagaacttgtaaattttctt---cacctgtggttgtgtttgtattctttcttcctgcaaccatctc |
9466473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 8940506 - 8940435
Alignment:
| Q |
35 |
gtggtccttctatccatgacaccaacacctaccttcataaatatccaaacttgcaaaaattaaagtgccata |
106 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
8940506 |
gtggtccttctatccatcacaccaacacctaccttcataaatatccaaacttgcaaaaacaaaagtggcata |
8940435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 573 - 713
Target Start/End: Complemental strand, 9364905 - 9364768
Alignment:
| Q |
573 |
aattctaaaatctccctcttcatcgattgggatatatacgtctccaccttcaaataaaccatggatccaatctggatacagaacttggaaattttcttcg |
672 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||| || ||||| ||||||| ||| |||||||| ||||||||| |||||| | |||||||||| |
|
|
| T |
9364905 |
aattctaaaatctccctcttcatcaatagggatatgtatatctcctccttcaagcaaattgtggatccagtctggatactcaacttgtatattttcttcg |
9364806 |
T |
|
| Q |
673 |
ccaccagtagttgttttagtattctttcttcctccaaccat |
713 |
Q |
| |
|
|||| || ||||||| ||||||||||||||||||||||| |
|
|
| T |
9364805 |
ccac---taattgtttttgtattctttcttcctccaaccat |
9364768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 457 - 659
Target Start/End: Complemental strand, 9300721 - 9300516
Alignment:
| Q |
457 |
ggaacttttaatttgtctccctctccttgaagcatctgcaccacagttttcatggacggccgatgcacggagtgccactgaatgcaccaaagtccgacaa |
556 |
Q |
| |
|
|||||||||| ||||||||||||||||| | ||| |||| |||||||||||||||||| ||||||| | ||||||||||||||||| | ||| |||| |
|
|
| T |
9300721 |
ggaacttttagcttgtctccctctccttgtaacatttgcaacacagttttcatggacggacgatgcataggttgccactgaatgcaccataatcccacaa |
9300622 |
T |
|
| Q |
557 |
ttgctagnnnnnnngcaattctaaaatctccc---tcttcatcgattgggatatatacgtctccaccttcaaataaaccatggatccaatctggatacag |
653 |
Q |
| |
|
|||| | |||||||| ||||| || |||||||| || ||||| | || |||||| ||||||| ||||| ||||||||||||||||| | |
|
|
| T |
9300621 |
ttgccattttttttgcaattctgaaatcatcctgttcttcatctatagggatttgtatgtctcctccttcaactaaactgtggatccaatctggatataa |
9300522 |
T |
|
| Q |
654 |
aacttg |
659 |
Q |
| |
|
|||||| |
|
|
| T |
9300521 |
aacttg |
9300516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 573 - 716
Target Start/End: Original strand, 9242139 - 9242279
Alignment:
| Q |
573 |
aattctaaaatctccctcttcatcgattgggatatatacgtctccaccttcaaataaaccatggatccaatctggatacagaacttggaaattttcttcg |
672 |
Q |
| |
|
|||||||||||||||||||||||| || ||||| | || ||||| ||||||| ||| |||||||| ||||||||| || ||| | ||||||||| |
|
|
| T |
9242139 |
aattctaaaatctccctcttcatcaatagggatttgtatatctcctccttcaagcaaattgtggatccagtctggatactcaatttgtatattttcttca |
9242238 |
T |
|
| Q |
673 |
ccaccagtagttgttttagtattctttcttcctccaaccatctc |
716 |
Q |
| |
|
||||| || |||||| |||||||||||||||||||||||||| |
|
|
| T |
9242239 |
ccacctgt---tgtttttgtattctttcttcctccaaccatctc |
9242279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 460 - 713
Target Start/End: Complemental strand, 9338156 - 9337909
Alignment:
| Q |
460 |
acttttaatttgtctccctctccttgaagcatctgcaccacagttttcatggacggccgatgcacggagtgccactgaatgcaccaaagtccgacaattg |
559 |
Q |
| |
|
|||||||| ||||| ||||||||||| ||||| |||| ||||| |||||| | ||| ||||||| | |||||| || || ||||| ||||| ||| ||| |
|
|
| T |
9338156 |
acttttaacttgtccccctctccttggagcatttgcatcacagatttcattgtcggacgatgcaaagggtgccattggatacaccatagtcccacagttg |
9338057 |
T |
|
| Q |
560 |
ctagnnnnnnngcaattctaaaatctccctcttcatcgattgggatatatacgtctccaccttcaaataaaccatggatccaatctggatacagaacttg |
659 |
Q |
| |
|
| | | ||||||||||||||| |||||||| || ||||| | || ||||| ||||| ||| |||||||| ||||||||| |||||| |
|
|
| T |
9338056 |
ccaatttttttggaattctaaaatctccgtcttcatcaatagggatttgtatctctcc---ttcaagcaaattgtggatccagtctggatactcaacttg |
9337960 |
T |
|
| Q |
660 |
gaaattttcttcgccaccagtagttgttttagtattctttcttcctccaaccat |
713 |
Q |
| |
|
| |||||||||||||| || ||||||| ||||||||||||||||||||||| |
|
|
| T |
9337959 |
tatattttcttcgccac---taattgtttttgtattctttcttcctccaaccat |
9337909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 571 - 671
Target Start/End: Original strand, 9257102 - 9257202
Alignment:
| Q |
571 |
gcaattctaaaatctccctcttcatcgattgggatatatacgtctccaccttcaaataaaccatggatccaatctggatacagaacttggaaattttctt |
670 |
Q |
| |
|
|||||||||||||||||||||||||| || | ||||| || ||| | |||| || ||||| ||||||||||||||||| |||||||| || ||||||| |
|
|
| T |
9257102 |
gcaattctaaaatctccctcttcatctatagcgatatgtatttcttctcctttaagcaaaccgtggatccaatctggatatagaacttgaaagttttctt |
9257201 |
T |
|
| Q |
671 |
c |
671 |
Q |
| |
|
| |
|
|
| T |
9257202 |
c |
9257202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 464 - 554
Target Start/End: Original strand, 9235901 - 9235991
Alignment:
| Q |
464 |
ttaatttgtctccctctccttgaagcatctgcaccacagttttcatggacggccgatgcacggagtgccactgaatgcaccaaagtccgac |
554 |
Q |
| |
|
||||||| ||||| || |||| |||||| || ||||| ||||||||||| ||||||| ||| | | ||||||||| |||||||||||||| |
|
|
| T |
9235901 |
ttaatttttctccatcaccttcaagcatttgtaccacggttttcatggatggccgatccaccggattccactgaatacaccaaagtccgac |
9235991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 560
Target Start/End: Original strand, 9085768 - 9085799
Alignment:
| Q |
529 |
tgccactgaatgcaccaaagtccgacaattgc |
560 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
9085768 |
tgccactgaatgcaccaaagtccgacaattgc |
9085799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 8940232 - 8940150
Alignment:
| Q |
244 |
agacattttacttccaagacattcaactctacactacttcaattttaacagtatat-tgctgaattggccattatatctttac |
325 |
Q |
| |
|
||||||| |||| ||| ||||||||||| ||||||||||| ||||||||||| | | |||| ||||||||||| ||||||| |
|
|
| T |
8940232 |
agacattacactttcaacacattcaactcagcactacttcaagtttaacagtatgtatactgagttggccattatttctttac |
8940150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 75; Significance: 4e-34; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 457 - 710
Target Start/End: Complemental strand, 9172127 - 9171877
Alignment:
| Q |
457 |
ggaacttttaatttgtctccctctccttgaagcatctgcaccacagttttcatggacggccgatgcacggagtgccactgaatgcaccaaagtccgacaa |
556 |
Q |
| |
|
||||||| ||| |||||||| |||||||| ||||| |||| |||||||||||| ||||| ||||||| | ||||| || |||||||||||||| || | |
|
|
| T |
9172127 |
ggaacttgtaacttgtctccatctccttgcagcatttgcatcacagttttcatagacggacgatgcataggttgccattggatgcaccaaagtcccacga |
9172028 |
T |
|
| Q |
557 |
ttgctagnnnnnnngcaattctaaaatctccctcttcatcgattgggatatatacgtctccaccttcaaataaaccatggatccaatctggatacagaac |
656 |
Q |
| |
|
|||| | |||||||||||||||||||| ||||| |||||||| | || ||||| ||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
9172027 |
ttgccaattttttcgcaattctaaaatctccctcatcatctattgggatttgtatttctcctccttcaagcaaactgtggatccaatctggatacagaac |
9171928 |
T |
|
| Q |
657 |
ttggaaattttcttcgccaccagtagttgttttagtattctttcttcctccaac |
710 |
Q |
| |
|
||| |||||||||| || || ||||| || |||||||||||||||||||| |
|
|
| T |
9171927 |
ttgaaaattttctt---catttgtggttgtgtttgtattctttcttcctccaac |
9171877 |
T |
|
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Target: scaffold0690 (Bit Score: 36; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0690
Description:
Target: scaffold0690; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 634 - 716
Target Start/End: Complemental strand, 5052 - 4973
Alignment:
| Q |
634 |
tggatccaatctggatacagaacttggaaattttcttcgccaccagtagttgttttagtattctttcttcctccaaccatctc |
716 |
Q |
| |
|
|||||||| ||||||||| |||||| | ||||||||| ||||| || ||||||| |||||||||||||||||||||||||| |
|
|
| T |
5052 |
tggatccagtctggatactcaacttgtatattttcttcaccacc-gt--ttgtttttgtattctttcttcctccaaccatctc |
4973 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0690; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 573 - 716
Target Start/End: Complemental strand, 2111 - 1974
Alignment:
| Q |
573 |
aattctaaaatctccctcttcatcgattgggatatatacgtctccaccttcaaataaaccatggatccaatctggatacagaacttggaaattttcttcg |
672 |
Q |
| |
|
|||||||||||||| ||||||||| || ||||| | || ||||| |||||| ||| |||||||| ||||||||| |||||| | ||||| || |
|
|
| T |
2111 |
aattctaaaatctctctcttcatcaatagggatttgtatatctcc---ttcaaacaaattgtggatccagtctggatactcaacttgtatgttttcatca |
2015 |
T |
|
| Q |
673 |
ccaccagtagttgttttagtattctttcttcctccaaccatctc |
716 |
Q |
| |
|
|||| | |||||||| |||||||||||||||||||||||||| |
|
|
| T |
2014 |
ccac---ttgttgttttcgtattctttcttcctccaaccatctc |
1974 |
T |
|
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Target: chr6 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 573 - 716
Target Start/End: Original strand, 15909995 - 15910132
Alignment:
| Q |
573 |
aattctaaaatctccctcttcatcgattgggatatatacgtctccaccttcaaataaaccatggatccaatctggatacagaacttggaaattttcttcg |
672 |
Q |
| |
|
|||||||||||||||||||||||| || ||||| | || ||||| |||||| ||| |||||||| ||||||||| |||||| | ||||| || |
|
|
| T |
15909995 |
aattctaaaatctccctcttcatcaatagggatttgtatatctcc---ttcaaacaaattgtggatccagtctggatactcaacttgtatgttttcatca |
15910091 |
T |
|
| Q |
673 |
ccaccagtagttgttttagtattctttcttcctccaaccatctc |
716 |
Q |
| |
|
|||| | |||||||| |||||||||||||||||||||||||| |
|
|
| T |
15910092 |
ccac---ttgttgtttttgtattctttcttcctccaaccatctc |
15910132 |
T |
|
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