View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4779_low_7 (Length: 327)

Name: NF4779_low_7
Description: NF4779
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4779_low_7
NF4779_low_7
[»] chr8 (52 HSPs)
chr8 (15-193)||(36673853-36674031)
chr8 (210-309)||(10007770-10007869)
chr8 (214-309)||(12351920-12352015)
chr8 (218-309)||(29968344-29968434)
chr8 (201-309)||(5513968-5514075)
chr8 (214-309)||(1823551-1823646)
chr8 (214-309)||(1857996-1858091)
chr8 (214-309)||(12353368-12353461)
chr8 (206-309)||(24122874-24122976)
chr8 (215-309)||(10006344-10006438)
chr8 (220-309)||(1824085-1824174)
chr8 (220-309)||(1858530-1858619)
chr8 (214-309)||(8388463-8388556)
chr8 (214-309)||(22221371-22221466)
chr8 (214-309)||(22227713-22227808)
chr8 (214-309)||(30335638-30335733)
chr8 (213-307)||(11282006-11282100)
chr8 (215-309)||(22220388-22220482)
chr8 (216-309)||(18979127-18979220)
chr8 (218-303)||(11287779-11287864)
chr8 (224-309)||(18978029-18978113)
chr8 (213-307)||(8389698-8389792)
chr8 (215-309)||(30336508-30336602)
chr8 (214-309)||(32207332-32207425)
chr8 (217-309)||(43661267-43661359)
chr8 (214-306)||(43661833-43661925)
chr8 (204-309)||(24123905-24124007)
chr8 (218-307)||(40471156-40471244)
chr8 (215-271)||(36249552-36249608)
chr8 (224-307)||(18970920-18971002)
chr8 (214-309)||(24359808-24359901)
chr8 (214-309)||(38980051-38980146)
chr8 (214-309)||(39011148-39011243)
chr8 (215-309)||(11283216-11283310)
chr8 (215-309)||(38974795-38974889)
chr8 (215-309)||(39005893-39005987)
chr8 (217-309)||(29043400-29043492)
chr8 (213-309)||(32968454-32968550)
chr8 (213-297)||(42982676-42982760)
chr8 (213-292)||(5514294-5514372)
chr8 (213-271)||(11456636-11456694)
chr8 (213-309)||(2379931-2380023)
chr8 (214-295)||(45114537-45114618)
chr8 (213-309)||(30568885-30568980)
chr8 (218-309)||(30570263-30570353)
chr8 (215-309)||(32973943-32974037)
chr8 (209-271)||(36250901-36250963)
chr8 (219-309)||(45112875-45112963)
chr8 (215-272)||(24483143-24483200)
chr8 (232-309)||(24488687-24488763)
chr8 (212-262)||(11288914-11288964)
chr8 (247-304)||(18488274-18488331)
[»] chr1 (51 HSPs)
chr1 (215-309)||(51684366-51684460)
chr1 (213-309)||(24422798-24422894)
chr1 (213-307)||(11437208-11437302)
chr1 (214-307)||(11436041-11436134)
chr1 (214-309)||(52274967-52275062)
chr1 (215-309)||(36613911-36614005)
chr1 (212-309)||(35067009-35067106)
chr1 (214-308)||(36612852-36612945)
chr1 (215-309)||(39699774-39699867)
chr1 (213-309)||(23980473-23980569)
chr1 (215-307)||(45148581-45148672)
chr1 (213-309)||(51685772-51685868)
chr1 (218-309)||(24426082-24426173)
chr1 (214-309)||(39698562-39698656)
chr1 (207-309)||(45149977-45150079)
chr1 (214-309)||(52827346-52827441)
chr1 (205-307)||(39153125-39153227)
chr1 (211-292)||(14999281-14999361)
chr1 (204-309)||(43058775-43058879)
chr1 (212-292)||(7674525-7674603)
chr1 (215-306)||(39222483-39222575)
chr1 (213-309)||(43060013-43060109)
chr1 (214-309)||(44404441-44404536)
chr1 (204-307)||(45157218-45157320)
chr1 (215-309)||(41364829-41364922)
chr1 (212-309)||(7675466-7675562)
chr1 (213-309)||(52276170-52276266)
chr1 (213-309)||(52828077-52828173)
chr1 (214-309)||(33088624-33088719)
chr1 (206-297)||(35594208-35594298)
chr1 (218-309)||(37526885-37526975)
chr1 (212-307)||(50680329-50680423)
chr1 (213-307)||(11190383-11190477)
chr1 (211-309)||(12389989-12390086)
chr1 (213-292)||(39151929-39152008)
chr1 (218-307)||(45156052-45156141)
chr1 (212-307)||(7983047-7983141)
chr1 (218-309)||(30249497-30249588)
chr1 (214-309)||(41366138-41366232)
chr1 (218-309)||(43378720-43378810)
chr1 (210-293)||(50681627-50681710)
chr1 (214-288)||(14999983-15000057)
chr1 (213-309)||(35595199-35595296)
chr1 (218-309)||(40384727-40384819)
chr1 (215-309)||(46066525-46066616)
chr1 (209-271)||(21185202-21185264)
chr1 (214-271)||(21945707-21945763)
chr1 (210-309)||(25652710-25652808)
chr1 (210-291)||(16290088-16290170)
chr1 (217-309)||(31194057-31194147)
chr1 (214-261)||(39221357-39221405)
[»] chr2 (43 HSPs)
chr2 (212-309)||(38840500-38840597)
chr2 (205-308)||(36449768-36449871)
chr2 (213-309)||(7899889-7899985)
chr2 (212-309)||(7898688-7898785)
chr2 (213-309)||(18904365-18904461)
chr2 (213-309)||(23869542-23869637)
chr2 (213-309)||(38839240-38839336)
chr2 (214-309)||(22848190-22848285)
chr2 (215-309)||(18299373-18299467)
chr2 (214-309)||(22587961-22588055)
chr2 (215-309)||(41878092-41878188)
chr2 (215-309)||(1034476-1034570)
chr2 (207-309)||(11938796-11938897)
chr2 (214-309)||(11258818-11258913)
chr2 (213-309)||(18905995-18906090)
chr2 (213-309)||(41879219-41879315)
chr2 (213-292)||(18868922-18869001)
chr2 (216-309)||(13030293-13030383)
chr2 (213-309)||(36450928-36451023)
chr2 (208-306)||(802601-802698)
chr2 (212-309)||(18797243-18797341)
chr2 (218-309)||(26544152-26544242)
chr2 (210-297)||(24476863-24476948)
chr2 (214-309)||(11257621-11257715)
chr2 (213-292)||(16446152-16446231)
chr2 (211-297)||(18300743-18300827)
chr2 (239-309)||(18869170-18869241)
chr2 (214-298)||(32739622-32739706)
chr2 (214-309)||(24475224-24475318)
chr2 (206-309)||(26545528-26545631)
chr2 (218-292)||(13567975-13568049)
chr2 (214-308)||(13570565-13570659)
chr2 (239-309)||(22587525-22587594)
chr2 (239-309)||(28617946-28618015)
chr2 (216-309)||(1033212-1033303)
chr2 (247-306)||(810791-810850)
chr2 (213-309)||(1093153-1093248)
chr2 (214-273)||(21837298-21837355)
chr2 (274-308)||(32739710-32739744)
chr2 (218-299)||(25298804-25298885)
chr2 (214-271)||(26829333-26829390)
chr2 (205-261)||(1091657-1091713)
chr2 (218-309)||(8535663-8535752)
[»] chr5 (47 HSPs)
chr5 (213-309)||(25523067-25523163)
chr5 (214-309)||(19752911-19753005)
chr5 (213-309)||(16650862-16650958)
chr5 (213-309)||(18486909-18487005)
chr5 (212-307)||(40255681-40255776)
chr5 (214-308)||(36486496-36486590)
chr5 (213-309)||(28538674-28538770)
chr5 (212-302)||(25524141-25524232)
chr5 (215-297)||(22940641-22940723)
chr5 (212-309)||(33160293-33160390)
chr5 (206-309)||(5778843-5778946)
chr5 (212-309)||(19754137-19754235)
chr5 (218-308)||(28539828-28539917)
chr5 (213-309)||(7311588-7311684)
chr5 (205-307)||(24332903-24333005)
chr5 (215-309)||(25056388-25056482)
chr5 (217-307)||(36485302-36485392)
chr5 (213-309)||(20216770-20216866)
chr5 (218-309)||(42195137-42195226)
chr5 (213-290)||(5730439-5730517)
chr5 (211-309)||(25055408-25055506)
chr5 (211-309)||(42196207-42196305)
chr5 (215-292)||(1796054-1796131)
chr5 (213-309)||(5777899-5777993)
chr5 (214-305)||(33158097-33158188)
chr5 (215-297)||(20214196-20214277)
chr5 (218-309)||(2686408-2686501)
chr5 (212-309)||(18154491-18154586)
chr5 (256-309)||(25524105-25524158)
chr5 (214-293)||(18485137-18485216)
chr5 (214-308)||(1015483-1015577)
chr5 (218-308)||(38834090-38834179)
chr5 (214-307)||(21835040-21835132)
chr5 (218-309)||(2186774-2186864)
chr5 (215-309)||(5962579-5962671)
chr5 (204-297)||(2373367-2373460)
chr5 (214-263)||(31576615-31576664)
chr5 (210-287)||(41663754-41663831)
chr5 (206-262)||(2373138-2373194)
chr5 (247-307)||(5730871-5730931)
chr5 (215-307)||(21834928-21835019)
chr5 (213-292)||(1016887-1016966)
chr5 (238-309)||(1797304-1797375)
chr5 (268-307)||(16650045-16650084)
chr5 (239-289)||(34893689-34893739)
chr5 (213-251)||(38476745-38476783)
chr5 (211-263)||(23040292-23040344)
[»] chr4 (53 HSPs)
chr4 (213-309)||(1963194-1963290)
chr4 (218-309)||(35935540-35935631)
chr4 (213-307)||(1290207-1290301)
chr4 (217-309)||(19750582-19750673)
chr4 (217-309)||(19789133-19789224)
chr4 (218-309)||(8758844-8758935)
chr4 (214-309)||(31599788-31599883)
chr4 (215-309)||(10471395-10471489)
chr4 (213-309)||(26421629-26421724)
chr4 (213-309)||(48780246-48780342)
chr4 (218-309)||(12129626-12129717)
chr4 (215-309)||(31600992-31601086)
chr4 (212-306)||(49308038-49308130)
chr4 (209-309)||(17388218-17388317)
chr4 (225-309)||(21539078-21539162)
chr4 (213-309)||(25685829-25685925)
chr4 (209-309)||(52491614-52491714)
chr4 (213-309)||(1835109-1835205)
chr4 (215-303)||(1964454-1964542)
chr4 (213-309)||(13509366-13509461)
chr4 (211-303)||(17382989-17383080)
chr4 (214-309)||(10470545-10470640)
chr4 (215-309)||(25684934-25685028)
chr4 (218-309)||(8155741-8155831)
chr4 (208-309)||(37728572-37728672)
chr4 (213-309)||(5526133-5526228)
chr4 (213-309)||(8757673-8757768)
chr4 (215-309)||(1834119-1834214)
chr4 (215-309)||(10447006-10447101)
chr4 (214-309)||(48781053-48781147)
chr4 (214-309)||(5525359-5525453)
chr4 (213-309)||(13386012-13386110)
chr4 (203-307)||(1289085-1289189)
chr4 (213-309)||(10448267-10448363)
chr4 (214-309)||(13386539-13386635)
chr4 (214-309)||(3928865-3928960)
chr4 (213-309)||(21177995-21178090)
chr4 (218-309)||(35934347-35934436)
chr4 (214-293)||(3927665-3927744)
chr4 (213-292)||(49306773-49306851)
chr4 (215-309)||(50909679-50909774)
chr4 (239-309)||(54110635-54110705)
chr4 (229-309)||(27257967-27258047)
chr4 (215-309)||(33310096-33310187)
chr4 (212-308)||(50909270-50909365)
chr4 (218-308)||(37727700-37727789)
chr4 (213-298)||(55603549-55603633)
chr4 (214-290)||(14868889-14868964)
chr4 (214-290)||(14876970-14877045)
chr4 (236-308)||(46638733-46638805)
chr4 (215-266)||(51291421-51291472)
chr4 (211-268)||(14804541-14804598)
chr4 (214-263)||(20919584-20919633)
[»] chr3 (63 HSPs)
chr3 (214-309)||(54540797-54540892)
chr3 (208-307)||(29931219-29931318)
chr3 (208-307)||(29980373-29980472)
chr3 (213-307)||(7758400-7758494)
chr3 (213-309)||(7267642-7267737)
chr3 (206-309)||(22776819-22776922)
chr3 (213-309)||(534497-534593)
chr3 (212-308)||(7268835-7268930)
chr3 (214-309)||(12703507-12703601)
chr3 (206-309)||(47614176-47614279)
chr3 (214-308)||(29932707-29932800)
chr3 (214-308)||(29981861-29981954)
chr3 (213-309)||(12700173-12700267)
chr3 (205-309)||(47610587-47610691)
chr3 (211-303)||(51038803-51038895)
chr3 (212-307)||(19984846-19984941)
chr3 (214-309)||(24516459-24516554)
chr3 (214-309)||(54539754-54539849)
chr3 (215-309)||(46719941-46720035)
chr3 (216-309)||(8456479-8456571)
chr3 (213-309)||(8875904-8876000)
chr3 (214-309)||(46721227-46721322)
chr3 (214-297)||(55192014-55192096)
chr3 (213-307)||(19986079-19986175)
chr3 (213-309)||(5029690-5029785)
chr3 (213-309)||(47609695-47609791)
chr3 (215-309)||(51469972-51470066)
chr3 (204-309)||(28263118-28263223)
chr3 (218-309)||(40426785-40426877)
chr3 (213-273)||(47615591-47615651)
chr3 (215-309)||(49216247-49216341)
chr3 (215-309)||(51037536-51037629)
chr3 (215-309)||(52840611-52840705)
chr3 (218-307)||(23770416-23770505)
chr3 (234-309)||(34019152-34019227)
chr3 (215-301)||(53901403-53901487)
chr3 (215-309)||(535789-535883)
chr3 (212-290)||(5001197-5001275)
chr3 (211-309)||(28262189-28262286)
chr3 (212-309)||(52276301-52276398)
chr3 (213-309)||(51470462-51470557)
chr3 (213-309)||(52281554-52281650)
chr3 (206-298)||(53614810-53614902)
chr3 (207-309)||(18442622-18442725)
chr3 (207-309)||(19487696-19487799)
chr3 (212-307)||(51347265-51347360)
chr3 (218-307)||(52104484-52104569)
chr3 (213-307)||(11671350-11671443)
chr3 (202-309)||(54987014-54987119)
chr3 (215-309)||(18456070-18456165)
chr3 (242-309)||(31645000-31645067)
chr3 (214-309)||(52839036-52839131)
chr3 (213-306)||(23769855-23769947)
chr3 (228-308)||(11670397-11670477)
chr3 (220-307)||(6250585-6250672)
chr3 (212-251)||(31039257-31039296)
chr3 (218-309)||(49398130-49398220)
chr3 (218-309)||(53616023-53616114)
chr3 (215-268)||(25336358-25336411)
chr3 (210-271)||(50296201-50296262)
chr3 (243-307)||(6171251-6171314)
chr3 (222-266)||(22775783-22775826)
chr3 (218-262)||(39843054-39843098)
[»] scaffold0302 (2 HSPs)
scaffold0302 (213-303)||(17468-17558)
scaffold0302 (215-309)||(18783-18877)
[»] chr7 (38 HSPs)
chr7 (215-309)||(18371424-18371518)
chr7 (207-309)||(17782560-17782662)
chr7 (212-309)||(22629480-22629580)
chr7 (213-305)||(22630463-22630555)
chr7 (215-309)||(31659622-31659717)
chr7 (213-309)||(3227601-3227697)
chr7 (213-309)||(42886293-42886389)
chr7 (228-309)||(18372464-18372544)
chr7 (204-309)||(31949809-31949914)
chr7 (213-309)||(7501859-7501955)
chr7 (213-309)||(31949320-31949416)
chr7 (202-293)||(11658367-11658457)
chr7 (213-309)||(127335-127429)
chr7 (217-309)||(17781663-17781755)
chr7 (218-305)||(128612-128699)
chr7 (214-309)||(7500454-7500548)
chr7 (214-309)||(47369780-47369875)
chr7 (220-309)||(14999162-14999249)
chr7 (212-309)||(21505413-21505508)
chr7 (215-309)||(47525374-47525468)
chr7 (218-309)||(11662558-11662649)
chr7 (216-309)||(3227109-3227201)
chr7 (214-287)||(20163585-20163658)
chr7 (213-309)||(30439365-30439460)
chr7 (213-289)||(34174010-34174085)
chr7 (222-289)||(47524532-47524599)
chr7 (215-309)||(48934910-48935004)
chr7 (214-307)||(31661018-31661111)
chr7 (215-299)||(769413-769497)
chr7 (214-307)||(34352795-34352888)
chr7 (214-270)||(5111441-5111497)
chr7 (212-307)||(46482594-46482689)
chr7 (214-251)||(9822334-9822371)
chr7 (214-251)||(10724259-10724296)
chr7 (207-264)||(15681587-15681644)
chr7 (214-299)||(42271552-42271637)
chr7 (206-250)||(21810109-21810153)
chr7 (213-273)||(32253441-32253501)
[»] chr6 (37 HSPs)
chr6 (212-309)||(10784589-10784687)
chr6 (218-309)||(1829610-1829701)
chr6 (212-309)||(7316301-7316398)
chr6 (212-309)||(27437825-27437922)
chr6 (213-309)||(8659263-8659359)
chr6 (213-309)||(8821871-8821967)
chr6 (213-309)||(16704504-16704600)
chr6 (206-309)||(8822800-8822903)
chr6 (213-308)||(14822358-14822453)
chr6 (212-308)||(14823583-14823680)
chr6 (215-309)||(7314880-7314973)
chr6 (214-309)||(8660211-8660305)
chr6 (210-309)||(27322075-27322173)
chr6 (210-309)||(34834586-34834685)
chr6 (228-309)||(10785920-10786000)
chr6 (214-309)||(3721611-3721706)
chr6 (213-291)||(6842308-6842386)
chr6 (239-307)||(26575063-26575131)
chr6 (212-266)||(27447963-27448017)
chr6 (213-290)||(3722533-3722610)
chr6 (220-296)||(29473082-29473158)
chr6 (214-297)||(1828738-1828821)
chr6 (214-309)||(3333033-3333128)
chr6 (218-309)||(5658759-5658850)
chr6 (213-307)||(6840192-6840284)
chr6 (216-307)||(12382720-12382811)
chr6 (215-307)||(16703570-16703659)
chr6 (240-309)||(34830927-34830996)
chr6 (213-263)||(16415586-16415636)
chr6 (213-307)||(17496791-17496890)
chr6 (212-290)||(27318312-27318389)
chr6 (206-309)||(30495704-30495806)
chr6 (213-309)||(26574617-26574712)
chr6 (212-271)||(18749094-18749153)
chr6 (217-263)||(26717137-26717183)
chr6 (240-309)||(12350823-12350891)
chr6 (214-271)||(34834172-34834229)
[»] scaffold0019 (2 HSPs)
scaffold0019 (216-309)||(61466-61559)
scaffold0019 (215-309)||(60090-60184)
[»] scaffold0003 (2 HSPs)
scaffold0003 (212-309)||(49440-49537)
scaffold0003 (212-266)||(39341-39395)
[»] scaffold0294 (2 HSPs)
scaffold0294 (213-309)||(5445-5541)
scaffold0294 (213-309)||(4440-4536)
[»] scaffold2034 (2 HSPs)
scaffold2034 (215-309)||(233-327)
scaffold2034 (236-309)||(985-1058)
[»] scaffold0320 (1 HSPs)
scaffold0320 (213-307)||(19486-19580)
[»] scaffold0112 (1 HSPs)
scaffold0112 (215-309)||(37148-37241)
[»] scaffold0045 (1 HSPs)
scaffold0045 (215-291)||(49109-49185)
[»] scaffold1303 (1 HSPs)
scaffold1303 (212-309)||(1436-1533)
[»] scaffold0632 (1 HSPs)
scaffold0632 (213-309)||(3315-3410)
[»] scaffold0586 (2 HSPs)
scaffold0586 (213-309)||(6341-6437)
scaffold0586 (206-309)||(9034-9135)
[»] scaffold0321 (1 HSPs)
scaffold0321 (217-303)||(18730-18816)
[»] scaffold0093 (2 HSPs)
scaffold0093 (216-309)||(2472-2564)
scaffold0093 (216-309)||(7095-7187)
[»] scaffold0369 (1 HSPs)
scaffold0369 (214-307)||(13192-13283)
[»] scaffold0049 (2 HSPs)
scaffold0049 (214-309)||(7422-7517)
scaffold0049 (215-309)||(7538-7631)
[»] scaffold0227 (1 HSPs)
scaffold0227 (215-309)||(126-220)
[»] scaffold0059 (2 HSPs)
scaffold0059 (216-301)||(4745-4829)
scaffold0059 (239-309)||(3699-3769)
[»] scaffold0186 (2 HSPs)
scaffold0186 (206-309)||(23072-23173)
scaffold0186 (213-265)||(23941-23993)
[»] scaffold0002 (1 HSPs)
scaffold0002 (213-271)||(454927-454985)
[»] scaffold0005 (1 HSPs)
scaffold0005 (211-268)||(35129-35186)


Alignment Details
Target: chr8 (Bit Score: 139; Significance: 1e-72; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 15 - 193
Target Start/End: Original strand, 36673853 - 36674031
Alignment:
Q  15 gcaacaacaaactgtcgtaaggaactgaacttgcatcatttaagcaatgtcttgagtttgagttttgtgtggatnnnnnnnntatggttgaaacagtatc 114  Q
    ||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||        |||||||| |||||||||    
T  36673853 gcaacaataaactgtcgcaaggaactcaacttgcatcatttaagcaatgtcttgagtttgagttttgtgtggataaaaaaaatatggttggaacagtatc 36673952  T
Q  115 atgctaaaggtgctttagctagattctccaacgtggattagtcctccctaaagtatgtgattagtatggttaccccaac 193  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36673953 atgctaaaggtgctttagctagattctccaacgtggattagtcctccctaaagtatgtgattagtatggttaccccaac 36674031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 210 - 309
Target Start/End: Complemental strand, 10007869 - 10007770
Alignment:
Q  210 ttataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| | |||| |||||||||| |||||||||||||||    
T  10007869 ttataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggtcccctaagatttagc 10007770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 214 - 309
Target Start/End: Original strand, 12351920 - 12352015
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||    
T  12351920 aggctaaagtgcattttcccccccttaactttcaaaaatttgcaattttgaccccctaagtacaaaaactacaattttgaccccctaagatttagc 12352015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 218 - 309
Target Start/End: Complemental strand, 29968434 - 29968344
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||    
T  29968434 taaagtgcacttttccccc-ttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattctggtcccctaagatttagc 29968344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 201 - 309
Target Start/End: Original strand, 5513968 - 5514075
Alignment:
Q  201 gttattaaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggcccccta 300  Q
    ||||||||  ||||||||||||||||||||| |||||| |||||| ||||| || ||||||||||| ||||||||||||||||||||||||| |||||||    
T  5513968 gttattaatatataggctaaagtgcacttttaccccct-aactttcaaaaacttccaattttggccccctaagtacaaaaactacaattttgccccccta 5514066  T
Q  301 agatttagc 309  Q
    | |||||||    
T  5514067 aaatttagc 5514075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 214 - 309
Target Start/End: Original strand, 1823551 - 1823646
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||  |||||||||||||||||||||| || |||||||||||||||    
T  1823551 aggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtcccctaagatttagc 1823646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 214 - 309
Target Start/End: Original strand, 1857996 - 1858091
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||  |||||||||||||||||||||| || |||||||||||||||    
T  1857996 aggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtcccctaagatttagc 1858091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 214 - 309
Target Start/End: Complemental strand, 12353461 - 12353368
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||| |||||||| ||||| |||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  12353461 aggctaaagtgcacttttccccc-ttaactttcaaaaacttgcaattttggccccctaagtac-aaaactataattttggccccctaagatttagc 12353368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 206 - 309
Target Start/End: Original strand, 24122874 - 24122976
Alignment:
Q  206 taaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatt 305  Q
    |||||| |||||||||||||| ||||||||||| |||||| ||||||||||||||||| || ||||||||||||||||| |||||| | |||||||||||    
T  24122874 taaattttaggctaaagtgcatttttcccccct-aactttaaaaaatttgcaattttgaccccctaagtacaaaaactataattttagtcccctaagatt 24122972  T
Q  306 tagc 309  Q
    ||||    
T  24122973 tagc 24122976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 10006344 - 10006438
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||  ||||||| ||||| |||||||||||||| ||||||||  ||||| ||||||||||||||||||||||||||    
T  10006344 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccctaagatttagc 10006438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 220 - 309
Target Start/End: Complemental strand, 1824174 - 1824085
Alignment:
Q  220 aagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||| |||||||||  ||||||| ||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  1824174 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccccctaagatttagc 1824085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 220 - 309
Target Start/End: Complemental strand, 1858619 - 1858530
Alignment:
Q  220 aagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||| |||||||||  ||||||| ||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  1858619 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccccctaagatttagc 1858530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 214 - 309
Target Start/End: Original strand, 8388463 - 8388556
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||| |||||  ||||||||||||| |||||||||| ||| |||| |||||||||||| ||||||||||||||||||||||||    
T  8388463 aggctaaagtgcactttcccccc--taacttttaaaaagttgcaattttagccccctatgtacaaaaactataattttggccccctaagatttagc 8388556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 309
Target Start/End: Complemental strand, 22221466 - 22221371
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||| ||| ||||||| ||||| ||||||||||| || ||||||||  ||||||||||||||| ||||||||||||||||    
T  22221466 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagc 22221371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 309
Target Start/End: Complemental strand, 22227808 - 22227713
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||| ||| ||||||| ||||| ||||||||||| || ||||||||  ||||||||||||||| ||||||||||||||||    
T  22227808 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagc 22227713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 309
Target Start/End: Original strand, 30335638 - 30335733
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||| |||||| ||||||||||||||||| |||||||||||||   ||||||||||||| |||||||||  ||||||||||||||||    
T  30335638 aggctaaagtgcatttttccacccttaacttttaaaaacttgcaattttggctcgctaagtacaaaaattacaattttaaccccctaagatttagc 30335733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 213 - 307
Target Start/End: Original strand, 11282006 - 11282100
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    |||| |||||||||||||| ||||||||||||||||||| |||||||||||||| ||||  ||||||||  ||||||||| ||||||||||||||    
T  11282006 taggttaaagtgcactttttcccccttaacttttaaaaagttgcaattttggccccctatatacaaaaatgacaattttgaccccctaagattta 11282100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 22220388 - 22220482
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||  ||||||| ||| | ||||||||||| || |||| ||| |||||||||||||||||||||||||||||||||    
T  22220388 ggctaaagtgcacttttccccctctaactttaaaatacttgcaattttgaccccctatgtataaaaactacaattttggccccctaagatttagc 22220482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 216 - 309
Target Start/End: Complemental strand, 18979220 - 18979127
Alignment:
Q  216 gctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||| ||||||| || || |||||||||||||| ||||| || ||||||||||||||||||||| || ||||||||    
T  18979220 gctaaagtgcacttttccccccctaactttcaacaacttgcaattttggccccctaaatataaaaactacaattttggccccttatgatttagc 18979127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 218 - 303
Target Start/End: Original strand, 11287779 - 11287864
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaaga 303  Q
    |||||||||||||| | ||| ||||||| ||||| ||||||||||||||  ||||||||| |||||||||||||||||||||||||    
T  11287779 taaagtgcactttttcacccctaactttaaaaaacttgcaattttggcccactaagtacagaaactacaattttggccccctaaga 11287864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 224 - 309
Target Start/End: Original strand, 18978029 - 18978113
Alignment:
Q  224 gcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||| |||||| ||||  || ||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  18978029 gcacttttcccccct-aactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttggccccttaagatttagc 18978113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 213 - 307
Target Start/End: Complemental strand, 8389792 - 8389698
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    |||| |||||||||||||||||| ||||| ||| ||||| |||||||||||| | | || ||||||||||||||||||| | |||||||||||||    
T  8389792 taggttaaagtgcacttttcccctcttaagtttcaaaaagttgcaattttggtcccttatgtacaaaaactacaattttagtcccctaagattta 8389698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 309
Target Start/End: Complemental strand, 30336602 - 30336508
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||| | ||||| ||||||| ||||| ||  |||||| ||||||||||||||||||||||||||||  ||| ||||||||||||    
T  30336602 ggctaaagtgcacttcttcccccctaactttcaaaaacttataattttagcctcctaagtacaaaaactacaattttaaccctctaagatttagc 30336508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 214 - 309
Target Start/End: Complemental strand, 32207425 - 32207332
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||| |||||  |||| || ||||| ||||||||||| |  |||||||||||||||||||||||||||| | |||||||||||    
T  32207425 aggctaaagtgcactttcccccc--taaccttcaaaaacttgcaattttgacgccctaagtacaaaaactacaattttggcctcttaagatttagc 32207332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 217 - 309
Target Start/End: Original strand, 43661267 - 43661359
Alignment:
Q  217 ctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||  ||||||| ||| ||||| || ||||||||| | | || |||||||||||| ||||||||||||||||||||||||    
T  43661267 ctaaagtgcacttttctacccttaattttaaaaaagttacaattttggtcccttatgtacaaaaactataattttggccccctaagatttagc 43661359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 214 - 306
Target Start/End: Complemental strand, 43661925 - 43661833
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattt 306  Q
    ||||| |||||||||||||| ||||||||||| ||||| ||||||||||   |  ||| |||||||||||| |||||||||||||||||||||    
T  43661925 aggctgaagtgcacttttccacccttaactttcaaaaagttgcaattttaatcctctatgtacaaaaactaaaattttggccccctaagattt 43661833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 309
Target Start/End: Complemental strand, 24124007 - 24123905
Alignment:
Q  204 attaaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaaga 303  Q
    |||||| | ||||||||||| |||||   ||||| ||||||| ||||| |||||||||||||||| ||||||| |||| ||||||||| ||| |||||||    
T  24124007 attaaaatttaggctaaagtacactt---cccccgtaactttcaaaaacttgcaattttggcctcttaagtactaaaattacaattttagcctcctaaga 24123911  T
Q  304 tttagc 309  Q
    ||||||    
T  24123910 tttagc 24123905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 40471244 - 40471156
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    ||||||||||||||||||| |||||||| ||||| || ||||||||| | | ||| |||||||||||||||||| ||||| |||||||||    
T  40471244 taaagtgcacttttccccctttaactttaaaaaacttacaattttggtc-cataaatacaaaaactacaattttagccccttaagattta 40471156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 36249552 - 36249608
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctccta 271  Q
    ||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||    
T  36249552 ggctaaagtgcacttttccccccttaagtttcaaaaagttgcaattttggcctccta 36249608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 224 - 307
Target Start/End: Original strand, 18970920 - 18971002
Alignment:
Q  224 gcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    ||||||||||||||| |||||| ||||  || ||||||||||| ||||||||||||||||||||||||| ||||  ||||||||    
T  18970920 gcacttttcccccct-aactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttgacccctgaagattta 18971002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 309
Target Start/End: Original strand, 24359808 - 24359901
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||| ||||| ||| || |||||||||||| |||| ||||| ||||| ||  ||||||||||||||||||| ||||||||||||||||    
T  24359808 aggctaaagtgctctttttccctct-aacttttaaaaagttgcgatttttgcctc-tatatacaaaaactacaattttgaccccctaagatttagc 24359901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 309
Target Start/End: Complemental strand, 38980146 - 38980051
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||||| ||||||| ||||  |||| ||||||||| || | |||  ||||| ||||||||||||||||| | ||||||    
T  38980146 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagc 38980051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 309
Target Start/End: Complemental strand, 39011243 - 39011148
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||||| ||||||| ||||  |||| ||||||||| || | |||  ||||| ||||||||||||||||| | ||||||    
T  39011243 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagc 39011148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 309
Target Start/End: Complemental strand, 11283310 - 11283216
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||| ||| |||||||||||||| ||||| ||| |||||| ||| |||| ||| |||||  |||||||||| ||||||| |||||||    
T  11283310 ggctaaagtgcattttcccccccttaactttcaaaaagttgtaattttagccccctatgtataaaaatgacaattttggtcccctaaaatttagc 11283216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 38974795 - 38974889
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||| ||||||| ||||  |||| ||||||||| || | |||  ||||| ||||||||||||||||| | ||||||    
T  38974795 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagc 38974889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 39005893 - 39005987
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||| ||||||| ||||  |||| ||||||||| || | |||  ||||| ||||||||||||||||| | ||||||    
T  39005893 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagc 39005987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 309
Target Start/End: Original strand, 29043400 - 29043492
Alignment:
Q  217 ctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||| ||||||||| |||||||| || ||||| | || |||||| || |||| |||||||||||||||||||  ||| ||||||||||||    
T  29043400 ctaaagttcacttttcctcccttaaccttcaaaaagtcgcgattttgaccccctatgtacaaaaactacaattttttccctctaagatttagc 29043492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 32968454 - 32968550
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||||| ||||||| ||||  |||| ||||||||| || | |||  ||||| ||||||||||||| ||| | ||||||    
T  32968454 taggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccctctatgttttagc 32968550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 297
Target Start/End: Complemental strand, 42982760 - 42982676
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggcccc 297  Q
    ||||||||||||||||||||| || |||| ||||||||| ||| |||||||||| |||    |||||||||||||||||| ||||    
T  42982760 taggctaaagtgcacttttccacctttaagttttaaaaagttgtaattttggccccctgtaaacaaaaactacaattttgacccc 42982676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 292
Target Start/End: Complemental strand, 5514372 - 5514294
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttg 292  Q
    |||||||||||||||||||  ||||| || ||| ||||| |||||||||| |||| |||| |||||||||||||||||||    
T  5514372 taggctaaagtgcacttttatcccct-aattttaaaaaacttgcaattttagccttctaaatacaaaaactacaattttg 5514294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 271
Target Start/End: Original strand, 11456636 - 11456694
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctccta 271  Q
    |||||||||||||||||||| |||| ||| ||| |||||||||||||||||||| ||||    
T  11456636 taggctaaagtgcacttttctccccctaattttcaaaaatttgcaattttggcccccta 11456694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 2380023 - 2379931
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||  |||||||||||  ||||||| ||||| ||| |||||||||| |||| |||| ||| |||||||||||||||| |||||||||||    
T  2380023 taggctaaagtttacttttccccc--taactttcaaaaagttgtaattttggcc-cctatgtacgaaa-ctacaattttggccccttaagatttagc 2379931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 295
Target Start/End: Complemental strand, 45114618 - 45114537
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggcc 295  Q
    ||||| |||||||||||||| ||| ||||||| ||||| ||||||||||||    ||| ||||| |||||||||||||||||    
T  45114618 aggctgaagtgcacttttccgcccctaactttcaaaaacttgcaattttggttcactatgtacacaaactacaattttggcc 45114537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 30568885 - 30568980
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||| |||| || || ||| ||||| || ||||||||  ||| || |||||||||||| |||||||  |||||||||||||||    
T  30568885 taggctaaagtgcactttccccctct-aagtttcaaaaagttacaattttgatctcttaggtacaaaaactataattttgatcccctaagatttagc 30568980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 309
Target Start/End: Complemental strand, 30570353 - 30570263
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||| ||| ||||  ||| ||||||||| |||||||||||  | | || ||||||||| || ||||||||||||||||||||||||    
T  30570353 taaagtgcaccttttcccctctaagttttaaaaagttgcaattttgatc-cttatgtacaaaaattagaattttggccccctaagatttagc 30570263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 309
Target Start/End: Complemental strand, 32974037 - 32973943
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||| ||||| ||||||| ||||  |||| ||||||||| || | |||  ||||| ||||||||||||| ||| | ||||||    
T  32974037 ggctaaagtgcactttttcccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccctctatgttttagc 32973943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 271
Target Start/End: Complemental strand, 36250963 - 36250901
Alignment:
Q  209 attataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctccta 271  Q
    ||||||||||||||| ||||||| | ||||||| ||||||||| ||| ||||||| |||||||    
T  36250963 attataggctaaagtacactttttctcccttaagttttaaaaagttgtaattttgacctccta 36250901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 309
Target Start/End: Original strand, 45112875 - 45112963
Alignment:
Q  219 aaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||| |||||| |||| |||||| ||||||||| |||||| | ||| |||||||||||| || |||||||| ||||||||| |||||    
T  45112875 aaagtgcatttttcctccct-aactttcaaaaatttgtaattttagtctc-taagtacaaaaattataattttggtcccctaagaattagc 45112963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 24483143 - 24483200
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaa 272  Q
    ||||||||||||||||||||| | ||| ||| ||||| |||||||||||||| |||||    
T  24483143 ggctaaagtgcacttttcccctcctaattttcaaaaacttgcaattttggccccctaa 24483200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 309
Target Start/End: Complemental strand, 24488763 - 24488687
Alignment:
Q  232 ccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||| ||||||| ||||| |||||||||||||| ||||| ||  ||||| |||||||| ||||| |||||||||||    
T  24488763 ccccccctaactttcaaaaacttgcaattttggccccctaaatatcaaaacaacaatttt-gccccgtaagatttagc 24488687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 11288964 - 11288914
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaatttgcaatttt 262  Q
    |||||||||||||||||||| | ||| ||||||| ||||| ||||||||||    
T  11288964 ataggctaaagtgcactttttcacccctaactttcaaaaacttgcaatttt 11288914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 304
Target Start/End: Complemental strand, 18488331 - 18488274
Alignment:
Q  247 aaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagat 304  Q
    ||||| |||||||||| | | ||||  ||||||||||||||||||||||| |||||||    
T  18488331 aaaaagttgcaattttagtcccctatatacaaaaactacaattttggccctctaagat 18488274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 6e-37; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 51684366 - 51684460
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||    
T  51684366 ggctaaagtgcacttttccccccttaacttttaaaaagttgcaattttggccccctatgtataaaaactacaattttggccccctaagatttagc 51684460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 24422798 - 24422894
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  24422798 taggctaaagtgcacttttacccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggccccctaagatttagc 24422894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 213 - 307
Target Start/End: Complemental strand, 11437302 - 11437208
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    ||||||||||||||||||| ||||||||||||| ||||| |||||||||||| | | ||||||||||||||||||||||||||||||||||||||    
T  11437302 taggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccccctaagattta 11437208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 214 - 307
Target Start/End: Original strand, 11436041 - 11436134
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||  |||||| |||||||||||||||||||||||||||||||    
T  11436041 aggctaaagtgcacttttccccctttaactttcaaaaacttgcaattttggccttttaagtataaaaactacaattttggccccctaagattta 11436134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 214 - 309
Target Start/End: Original strand, 52274967 - 52275062
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||| ||||| ||||||| ||||| ||||||||||| || |||||||||||||||||||||||||| |||||||||||||||    
T  52274967 aggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgggcccctaagatttagc 52275062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 215 - 309
Target Start/End: Complemental strand, 36614005 - 36613911
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||| |||||| ||| ||||||||||||| ||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  36614005 ggctaaagtgcatttttcctcccctaacttttaaaaacttgtaattttggccccctaagtacaaaaactacaattttgaccccctaagatttagc 36613911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 212 - 309
Target Start/End: Complemental strand, 35067106 - 35067009
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||||||||||| ||| ||||| |||| ||||||||| |||| | ||||||||||||||||||||||||||| |||||||    
T  35067106 ataggctaaagtgcacttttccccccttaagtttcaaaaagttgcgattttggccccctatgaacaaaaactacaattttggccccctaatatttagc 35067009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 36612852 - 36612945
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttag 308  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||  || ||||||||||||||||||||||  |||||||||||||||    
T  36612852 aggctaaagtgcatttttccccccttaactttcaaaaatttgcaattttgg-atcttaagtacaaaaactacaattttaaccccctaagatttag 36612945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 309
Target Start/End: Complemental strand, 39699867 - 39699774
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||||| |||||| || || ||||||||||| || |||||||||| |||||||||||||||||||||||||||||||    
T  39699867 ggctaaagtgcacttttcccccct-aactttcaataacttgcaattttgaccccctaagtacagaaactacaattttggccccctaagatttagc 39699774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 23980569 - 23980473
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||||  ||||||| ||||| |||||||||||||  ||||||||||||||||| |||||||| | |||||||||||||    
T  23980569 taggctaaagtgcacttttccccctctaactttaaaaaacttgcaattttggctccctaagtacaaaaactataattttggtctcctaagatttagc 23980473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 215 - 307
Target Start/End: Original strand, 45148581 - 45148672
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    ||||||||||||||||| ||| ||||||||| ||||| |||||||||||||| |||||||| |||||||||||||||| ||||||||||||||    
T  45148581 ggctaaagtgcactttttcccgcttaactttcaaaaacttgcaattttggccccctaagta-aaaaactacaattttgcccccctaagattta 45148672  T

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Target: chr1; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 51685868 - 51685772
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||||  ||||||| ||||| |||| |||||||||  ||| |||||||||||||||||||| ||||||||||||||||    
T  51685868 taggctaaagtgcacttttccccctctaactttcaaaaagttgcgattttggccctctatgtacaaaaactacaattttgaccccctaagatttagc 51685772  T

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Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 218 - 309
Target Start/End: Complemental strand, 24426173 - 24426082
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||| |||||  ||||||| ||||| |||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  24426173 taaagtgcactttcccccctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtcccctaagatttagc 24426082  T

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Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 309
Target Start/End: Original strand, 39698562 - 39698656
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||| |||||||||||||||||||| || ||||||||||| |||||||||| |||||| |||||||| || ||||||||||||    
T  39698562 aggctaaagtgcactttaccccccttaacttttaaaaactttcaattttggccccctaagtacagaaactataattttgg-ccactaagatttagc 39698656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 207 - 309
Target Start/End: Complemental strand, 45150079 - 45149977
Alignment:
Q  207 aaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttg-gccccctaagatt 305  Q
    ||||| |||| ||||||||||||||||||||| |||||| ||||| |||||||||||||| | ||||||||||||| |||||||||  ||||||||||||    
T  45150079 aaattttaggttaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggccccttaagtacaaaaacaacaattttgccccccctaagatt 45149981  T
Q  306 tagc 309  Q
    ||||    
T  45149980 tagc 45149977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 309
Target Start/End: Original strand, 52827346 - 52827441
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||||||||| || ||||||||| ||||| |||||||   ||||||||||||||||    
T  52827346 aggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagc 52827441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 307
Target Start/End: Complemental strand, 39153227 - 39153125
Alignment:
Q  205 ttaaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagat 304  Q
    |||||| | ||| |||||||||||||| ||||||||| ||| ||||| |||||||||||||| | || |||||||||||||||||||| ||| |||||||    
T  39153227 ttaaataaaaggttaaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagat 39153128  T
Q  305 tta 307  Q
    |||    
T  39153127 tta 39153125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 211 - 292
Target Start/End: Original strand, 14999281 - 14999361
Alignment:
Q  211 tataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttg 292  Q
    |||||||||||||| ||||||||||||| |||||| ||||| ||||||||||| || |||||||||||||||||||||||||    
T  14999281 tataggctaaagtgtacttttcccccct-aactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttg 14999361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 204 - 309
Target Start/End: Original strand, 43058775 - 43058879
Alignment:
Q  204 attaaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaaga 303  Q
    |||||| | |||| |||||| ||||||| |||||| |||||| ||||| ||||||||||| || |||||||||||||||||||||||| |||| ||||||    
T  43058775 attaaaatgtaggttaaagtacactttttccccct-aactttgaaaaacttgcaattttgaccccctaagtacaaaaactacaattttagccctctaaga 43058873  T
Q  304 tttagc 309  Q
    ||||||    
T  43058874 tttagc 43058879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 212 - 292
Target Start/End: Original strand, 7674525 - 7674603
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttg 292  Q
    |||||||||||||| |||||||||||| |||||||||||| |||||||||||| | |||||||||||||||||||||||||    
T  7674525 ataggctaaagtgcccttttcccccct-aacttttaaaaacttgcaattttgggc-cctaagtacaaaaactacaattttg 7674603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 215 - 306
Target Start/End: Complemental strand, 39222575 - 39222483
Alignment:
Q  215 ggctaaagtgcacttttcccccctt-aacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattt 306  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||||||||| |||||||| |||||||||||| || |||| |||||||||    
T  39222575 ggctaaagtgcacttttaccccctttaactttcaaaaacttgcaattttggccccctaagtataaaaactacaatgttagccctctaagattt 39222483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 43060109 - 43060013
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||| ||||| |||||  ||||||| ||||||||| ||||||| || | ||||||||||||||||||||||| |||| |||||||||||    
T  43060109 taggctaaagtgtactttaccccctctaactttcaaaaatttgaaattttgaccccttaagtacaaaaactacaattttgaccccttaagatttagc 43060013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 309
Target Start/End: Original strand, 44404441 - 44404536
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||| ||||||||| ||| | ||||||| ||||| | |||||||| ||| ||||||||||||||||| |||||||||||||||| |||||||    
T  44404441 aggctaaaatgcactttttccctcataactttcaaaaactagcaattttagccccctaagtacaaaaactataattttggccccctaaaatttagc 44404536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 204 - 307
Target Start/End: Complemental strand, 45157320 - 45157218
Alignment:
Q  204 attaaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaaga 303  Q
    ||||| ||| ||||||||||||||||| ||||||| || ||| ||||| |||||||||||||| |||| |||||||||||||||||||| |||  |||||    
T  45157320 attaatttaaaggctaaagtgcactttccccccct-aagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttgaccctttaaga 45157222  T
Q  304 ttta 307  Q
    ||||    
T  45157221 ttta 45157218  T

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Target: chr1; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 41364829 - 41364922
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||| ||||| |||||| ||||| |||||||||||||| ||||| ||| ||||| ||||||| | ||||||||||||||||    
T  41364829 ggctaaagtgcacttttctcccct-aactttcaaaaacttgcaattttggccccctaaataccaaaaccacaatttagcccccctaagatttagc 41364922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 309
Target Start/End: Complemental strand, 7675562 - 7675466
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||| ||||| || || |||||||| ||||| ||||||||||| ||||||||||| ||||| || ||||||| ||||||||||||||||    
T  7675562 ataggctaaagtgtacttt-ccacctttaactttcaaaaacttgcaattttgccctcctaagtaaaaaaattataattttgaccccctaagatttagc 7675466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 52276266 - 52276170
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||| ||||||||||||| ||||   ||||||| ||||||||| |||||||||| ||||||||||||||||| || ||| | |||||||||||||||    
T  52276266 taggttaaagtgcactttcccccttctaactttcaaaaatttgtaattttggccccctaagtacaaaaactataaatttagtcccctaagatttagc 52276170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 52828173 - 52828077
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||| |||||||||||||||||||  ||| ||| ||||| |||||||||||||  ||||||||| ||||| ||||||| | ||||||||||||||||    
T  52828173 taggttaaagtgcacttttccccctctaattttcaaaaacttgcaattttggctccctaagtaccaaaaccacaatttagcccccctaagatttagc 52828077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 309
Target Start/End: Complemental strand, 33088719 - 33088624
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||| |  |||| || ||||| ||||||||||| ||   ||||||||||||||||||||||| | ||||||||||||||    
T  33088719 aggctaaagtgcacttttccctctctaacattcaaaaacttgcaattttgaccctttaagtacaaaaactacaattttgcctccctaagatttagc 33088624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 206 - 297
Target Start/End: Original strand, 35594208 - 35594298
Alignment:
Q  206 taaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggcccc 297  Q
    ||||||| |||||||||||||||||||| ||| ||||||| ||||| ||||||||||| || ||||||||  ||||||||||||||| ||||    
T  35594208 taaattaaaggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgacc-cctaagtattaaaactacaattttgacccc 35594298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 309
Target Start/End: Complemental strand, 37526975 - 37526885
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||| |||||||||||||||||||| ||||| |||||||||||||  ||||| || | |||| |||||||||| |||||||||||||||    
T  37526975 taaagtgtacttttccccccttaactttcaaaaacttgcaattttggctccctaaatatagaaaccacaattttgg-cccctaagatttagc 37526885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 50680329 - 50680423
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    ||||| ||||||||| |||||||| ||||||||  ||||| |||||||||||||| |||||||| |||||||| |||||| | |||||||||||||    
T  50680329 ataggttaaagtgcatttttcccc-cttaacttccaaaaacttgcaattttggccccctaagtataaaaactataattttagtcccctaagattta 50680423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 307
Target Start/End: Original strand, 11190383 - 11190477
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    |||||||||||||||||||| |||||||| ||||||||| ||||||||||||   ||||  |||||||||| ||||||||  || ||||||||||    
T  11190383 taggctaaagtgcacttttcaccccttaaattttaaaaagttgcaattttggttccctatatacaaaaactgcaattttgatcctctaagattta 11190477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 211 - 309
Target Start/End: Complemental strand, 12390086 - 12389989
Alignment:
Q  211 tataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||| ||||||| |||||||||| ||||| |||| ||||||  | |||| ||||||||| || |||||||||||||| |||||||||    
T  12390086 tataggctaaagtgcatttttccctccttaactttcaaaaagttgcgattttgatcccctatgtacaaaaattataattttggccccct-agatttagc 12389989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 213 - 292
Target Start/End: Original strand, 39151929 - 39152008
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttg 292  Q
    |||| ||||||||| |||| ||||||||| ||| ||||| ||| |||||||||| |||| ||||||||||||||||||||    
T  39151929 taggttaaagtgcattttttcccccttaagtttcaaaaacttgtaattttggccccctatgtacaaaaactacaattttg 39152008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 45156052 - 45156141
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    |||||| ||||||||| ||||||| ||| ||||| || |||||||| ||| ||| |||||||||||||||||||  ||| ||||||||||    
T  45156052 taaagttcacttttcctcccttaagtttcaaaaacttacaattttgaccttctatgtacaaaaactacaattttaaccctctaagattta 45156141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 7983047 - 7983141
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    ||||| ||||||||||||||| ||| | |||||| || || |||||||||||||| |||| |||  ||||| ||||||||| ||||||||||||||    
T  7983047 ataggttaaagtgcacttttctcccgt-aactttcaacaacttgcaattttggccccctatgtatcaaaaccacaattttgcccccctaagattta 7983141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 309
Target Start/End: Complemental strand, 30249588 - 30249497
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||| ||||| || ||||||| ||||| ||| |||||||  ||  || |||||||||||||||||||| |||| |||||||||||    
T  30249588 taaagtgcactcttccctccgtaactttcaaaaagttgtaattttgatcttttatgtacaaaaactacaattttgaccccttaagatttagc 30249497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 309
Target Start/End: Complemental strand, 41366232 - 41366138
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||| | ||||||| |||||  ||||||||| ||| | ||||||  ||||| |||| ||| |||||||||||||||||    
T  41366232 aggctaaagtgcacttttcccctcctaactttcaaaaacatgcaattttagccccttaagtatcaaaaccacaa-tttagccccctaagatttagc 41366138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 309
Target Start/End: Complemental strand, 43378810 - 43378720
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||| | | |||||||| ||||| || ||||||||  | |||||||||||||| |||||||||| || |||||||||||||    
T  43378810 taaagtgcacttttctctc-ttaactttcaaaaacttacaattttgatcccctaagtacaaaaattacaattttgaccacctaagatttagc 43378720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 293
Target Start/End: Complemental strand, 50681710 - 50681627
Alignment:
Q  210 ttataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttgg 293  Q
    |||| ||||||||||||||||||||| ||||| ||| ||||| |||||||||||||   |||| || |||||||||||| ||||    
T  50681710 ttattggctaaagtgcacttttcccctcttaattttcaaaaacttgcaattttggctctctaactataaaaactacaatattgg 50681627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 15000057 - 14999983
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaat 288  Q
    |||||||||| ||||||| || || ||||||||||||| |||||||||||  | ||||||||||||| |||||||    
T  15000057 aggctaaagttcactttttcctccctaacttttaaaaacttgcaattttgatcccctaagtacaaaatctacaat 14999983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 35595296 - 35595199
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaa-tttgcaattttggcctcctaagtacaaaaact-acaattttggccccctaagatttagc 309  Q
    |||||||||||| |||||||||||  ||||||| ||||| || ||||||||| || |||| ||| ||||||| |||||||||| |||||||||||||||    
T  35595296 taggctaaagtgtacttttccccctctaactttaaaaaacttagcaattttgaccccctatgtataaaaactaacaattttgg-cccctaagatttagc 35595199  T

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Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 218 - 309
Target Start/End: Original strand, 40384727 - 40384819
Alignment:
Q  218 taaagtgcacttttccccccttaactttt-aaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||  || ||| | |||| ||||| |||||||||| | |||||| ||||||||||||||||||||  ||||||| |||||||    
T  40384727 taaagtgcacttttttcctctttaattttcaaaaagttgcaattttagtctcctatgtacaaaaactacaattttgatcccctaaaatttagc 40384819  T

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Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 46066525 - 46066616
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||| |||||||||||||| ||  ||||||| ||||| |||| ||||| ||| | || ||||||||||||||||||| | |||||||||||||||    
T  46066525 ggcttaagtgcacttttcctcc--taactttcaaaaagttgcgattttagccccttatgtacaaaaactacaattttag-cccctaagatttagc 46066616  T

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Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 271
Target Start/End: Original strand, 21185202 - 21185264
Alignment:
Q  209 attataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctccta 271  Q
    |||||||||||||||||| |||||  ||||||| ||||||||| ||||  |||||||||||||    
T  21185202 attataggctaaagtgcatttttcatcccttaagttttaaaaagttgcgcttttggcctccta 21185264  T

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Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 21945707 - 21945763
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctccta 271  Q
    ||||||||||| ||||||||||  |||| ||||||||| |||||||||||||||||||    
T  21945707 aggctaaagtgtacttttcccct-ttaagttttaaaaagttgcaattttggcctccta 21945763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 309
Target Start/End: Original strand, 25652710 - 25652808
Alignment:
Q  210 ttataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||| ||| ||  || || ||| ||||| |||||||||||  | | |||||||||||| || || |||||||| ||||||||||||    
T  25652710 ttataggctaaagtgcaccttttccttct-aattttcaaaaacttgcaattttgatcccttaagtacaaaaattataaatttggcccgctaagatttagc 25652808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 291
Target Start/End: Original strand, 16290088 - 16290170
Alignment:
Q  210 ttataggctaaagtgcacttttcccccct-taacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaatttt 291  Q
    ||||||||||||||||| |||| |||| | |||| || ||||| |||||||||||| | | || ||| |||||||||||||||    
T  16290088 ttataggctaaagtgcattttttccccatctaacgttcaaaaagttgcaattttggtcccttatgtataaaaactacaatttt 16290170  T

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Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 309
Target Start/End: Original strand, 31194057 - 31194147
Alignment:
Q  217 ctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||| ||||||||| |||  ||||||||||||| || | | ||||||| |  | |||||||||||| |||||||||||  |||||||||||    
T  31194057 ctaaagggcacttttcaccc--taacttttaaaaagttacgaatttggccccacatgtacaaaaactaaaattttggccctttaagatttagc 31194147  T

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Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 39221357 - 39221405
Alignment:
Q  214 aggctaaagtgcacttttcccccct-taacttttaaaaatttgcaattt 261  Q
    |||||||| |||||||||||||||| ||||||| ||||| |||||||||    
T  39221357 aggctaaattgcacttttcccccctctaactttcaaaaacttgcaattt 39221405  T

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Target: chr2 (Bit Score: 78; Significance: 3e-36; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 212 - 309
Target Start/End: Complemental strand, 38840597 - 38840500
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||    
T  38840597 ataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagccccctaagatttagc 38840500  T

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Target: chr2; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 205 - 308
Target Start/End: Original strand, 36449768 - 36449871
Alignment:
Q  205 ttaaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagat 304  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||| ||||| ||||     
T  36449768 ttaaaatataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgcccccccaagaa 36449867  T
Q  305 ttag 308  Q
    ||||    
T  36449868 ttag 36449871  T

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Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 7899985 - 7899889
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||    
T  7899985 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaattttagccccctaagatttagc 7899889  T

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Target: chr2; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 212 - 309
Target Start/End: Original strand, 7898688 - 7898785
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||| ||||||||||||||| |||||||||||| ||||| |||||||||| |||||||||||| | |||||||||||||||||||||||||||||||    
T  7898688 ataggttaaagtgcacttttctccccttaactttcaaaaacttgcaatttttgcctcctaagtatagaaactacaattttggccccctaagatttagc 7898785  T

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Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 18904365 - 18904461
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||||||||||||| |||||  ||||||||||||| | ||||||||||||||||||||||||  |||||||| |||||    
T  18904365 taggctaaagtgcacttttccccccttaactttcaaaaacgtgcaattttggccccttaagtacaaaaactacaattttggttccctaagaattagc 18904461  T

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Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 23869637 - 23869542
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||| || ||||||||||||||    
T  23869637 taggctaaagtgcacttttccacccttaacttt-aaaaacttgcaattttggccccctaaatacaaaaactacaattttagctccctaagatttagc 23869542  T

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Target: chr2; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 38839240 - 38839336
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||| |||| ||||||||| ||| ||||| |||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||    
T  38839240 taggctaaagtgcattttttcccccttaattttcaaaaacttgcaattttagccccctaactacaaaaactacaattttggccccctaagatttagc 38839336  T

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Target: chr2; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 214 - 309
Target Start/End: Original strand, 22848190 - 22848285
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||| ||||| ||||||| ||||| |||||||||||| | ||||| ||||||||||||||||||||| ||||||||||||||    
T  22848190 aggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggctccctaagatttagc 22848285  T

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Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 18299373 - 18299467
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||| ||| ||||||| ||||| || ||||||||||| |||||||| |||||||||||||||||||||||| ||||||||    
T  18299373 ggctaaagtgcacttttccacccgtaactttcaaaaactttcaattttggccacctaagtataaaaactacaattttggccccctatgatttagc 18299467  T

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Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 309
Target Start/End: Complemental strand, 22588055 - 22587961
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||| |||||||| | ||||||| ||||| |||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||    
T  22588055 aggctaaagtgcatttttcccctcataactttcaaaaacttgcaattttggcc-cctatgtacaaaaactacaattttggccccttaagatttagc 22587961  T

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Target: chr2; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 41878092 - 41878188
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaa---tttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||| |||||||||||||| |||||   ||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||    
T  41878092 ggctaaagtgcacttt-ccccccttaactttcaaaaactatttgcaattttggccccctaagtacagaaactacaattttggccccttaagatttagc 41878188  T

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Target: chr2; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 215 - 309
Target Start/End: Complemental strand, 1034570 - 1034476
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||||||||||| |||||  ||||||||||||| |||| |||| ||||| ||||||| | ||||||||||||||||    
T  1034570 ggctaaagtgcacttttccccccttaactttcaaaaacatgcaattttggccccctacgtaccaaaaccacaatttagcccccctaagatttagc 1034476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 207 - 309
Target Start/End: Complemental strand, 11938897 - 11938796
Alignment:
Q  207 aaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattt 306  Q
    ||||| ||||||||||||||||||||| ||| ||||||| ||||| |||||||||||| |||||||||||||||| || ||||||| |||||||||| ||    
T  11938897 aaattttaggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttggtctcctaagtacaaaaa-tataattttgcccccctaagaatt 11938799  T
Q  307 agc 309  Q
    |||    
T  11938798 agc 11938796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 214 - 309
Target Start/End: Complemental strand, 11258913 - 11258818
Alignment:
Q  214 aggctaaagtgcacttttcccccct-taacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||| |||||||| || ||||||| ||||| |||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  11258913 aggctaaagtgca-ttttcccctctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtcccctaagatttagc 11258818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 18906090 - 18905995
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||||   ||||||| ||||| |||||||||| ||| |||||||||||||||||||||||| | |||||||||||||||    
T  18906090 taggctaaagtgcacttttccccttctaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttag-cccctaagatttagc 18905995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 41879315 - 41879219
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||| ||||||| ||||||||| ||| ||||| |||||||||||||| |||||||||| |||||||||||||  |||||||| |||||||    
T  41879315 taggctaaagtacactttttcccccttaattttcaaaaacttgcaattttggccccctaagtacataaactacaattttaaccccctaaaatttagc 41879219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 213 - 292
Target Start/End: Original strand, 18868922 - 18869001
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttg 292  Q
    |||||||||||| |||||||| ||| ||||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  18868922 taggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggcctcctaaatacaaaaactacaattttg 18869001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 216 - 309
Target Start/End: Original strand, 13030293 - 13030383
Alignment:
Q  216 gctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||  ||||||| ||||| ||| |||||||||| |||||||||||||| ||||||||| |||||||||||||||||    
T  13030293 gctaaagtgcacttttccccc--taactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaatttttgccccctaagatttagc 13030383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 36451023 - 36450928
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||| ||||||||||||||||||| |||||||| ||||| |||||||||||| | |||||||||| |||||||||||| ||||||| |||| |||||    
T  36451023 taggttaaagtgcacttttccccc-ttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaatttcggccccccaagaattagc 36450928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 306
Target Start/End: Complemental strand, 802698 - 802601
Alignment:
Q  208 aattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattt 306  Q
    ||||| ||||||||||| ||||||||||||| || ||| ||||| |||||||||||||| |||  |||||||||||||||||||| ||| |||||||||    
T  802698 aattaaaggctaaagtgtacttttcccccct-aagtttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccctctaagattt 802601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 309
Target Start/End: Original strand, 18797243 - 18797341
Alignment:
Q  212 ataggctaaagtgcacttttcc-ccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||| |||| ||||||| ||||| ||||||||||| || | ||||||  ||||||||||||||| |||||||| |||||||    
T  18797243 ataggctaaagtgcacttttccaccccctaactttcaaaaacttgcaattttgaccccttaagtattaaaactacaattttgaccccctaaaatttagc 18797341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 309
Target Start/End: Original strand, 26544152 - 26544242
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||  ||| ||| |||||||||||| |||||||||  |||||||||||||||||||| |||| ||| |||||||||||||    
T  26544152 taaagtgcacttttctacccctaatttttaaaaatttacaattttggt-tcctaagtacaaaaactacagttttagcctcctaagatttagc 26544242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 297
Target Start/End: Complemental strand, 24476948 - 24476863
Alignment:
Q  210 ttataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggcccc 297  Q
    |||| ||||| ||||||||||| |||||  |||||||||||| ||| |||||||| | ||||||||||||||||||||||||| ||||    
T  24476948 ttattggctagagtgcactttttccccc--aacttttaaaaacttgtaattttggtcccctaagtacaaaaactacaattttgacccc 24476863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 309
Target Start/End: Original strand, 11257621 - 11257715
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||| | ||  ||||||| ||||| ||||||||||   | |||||||| ||||||||||||||||||| |||||||||||||    
T  11257621 aggctaaagtgcacttttactcctctaactttcaaaaacttgcaattttaaac-cctaagtataaaaactacaattttggcctcctaagatttagc 11257715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 213 - 292
Target Start/End: Original strand, 16446152 - 16446231
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttg 292  Q
    |||||||||||||| |||||  ||||||||||| ||||| ||||||||||  |||| ||| |||||||||||||||||||    
T  16446152 taggctaaagtgcatttttctacccttaactttcaaaaacttgcaattttaacctcataaatacaaaaactacaattttg 16446231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 211 - 297
Target Start/End: Complemental strand, 18300827 - 18300743
Alignment:
Q  211 tataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggcccc 297  Q
    |||| |||||| ||||||||||||||  ||||||| | ||| ||||||||||| || ||||||||||||||||||||||||| ||||    
T  18300827 tataagctaaattgcacttttccccc--taactttcataaacttgcaattttgaccccctaagtacaaaaactacaattttgacccc 18300743  T

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Target: chr2; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 18869241 - 18869170
Alignment:
Q  239 taacttttaaaaatttg-caattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||| ||||||||| |||||||||||| |||||||||||||||||||||||   |||||||||||||||    
T  18869241 taactttcaaaaatttggcaattttggccttctaagtacaaaaactacaatttttatcccctaagatttagc 18869170  T

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Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 298
Target Start/End: Original strand, 32739622 - 32739706
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccc 298  Q
    ||||||||||| | ||||   ||| ||||||| ||||| |||||||||||||| | || ||||||||||||||||||||||||||    
T  32739622 aggctaaagtgtattttttttcccctaactttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttggccccc 32739706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 309
Target Start/End: Original strand, 24475224 - 24475318
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||| |||  | ||||| |||||| ||||| ||| |||||| ||| |||||||| ||||||||||||||||||||||||  |||||||    
T  24475224 aggctaaagtgcgcttccctcccct-aactttcaaaaacttgtaatttttgccccctaagtataaaaactacaattttggccccctataatttagc 24475318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 309
Target Start/End: Complemental strand, 26545631 - 26545528
Alignment:
Q  206 taaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatt 305  Q
    |||||| || |||||||||||||||| ||  | | ||||| ||||||||||||||||| || | ||| |||||||| || ||||||| ||| ||||||||    
T  26545631 taaattttaagctaaagtgcactttttccttcatgactttcaaaaatttgcaattttgaccccttaaatacaaaaattataattttgaccctctaagatt 26545532  T
Q  306 tagc 309  Q
    ||||    
T  26545531 tagc 26545528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 292
Target Start/End: Original strand, 13567975 - 13568049
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttg 292  Q
    ||||||| ||||||||||   ||| ||| ||||| |||||||||||||| ||||| |||||||||||||||||||    
T  13567975 taaagtgtacttttccccttctaagtttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttg 13568049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 13570659 - 13570565
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttag 308  Q
    ||||||||||||| |||||  ||| ||||||| ||||| |||||||||| | | | ||||||||||||||| |||||||| |||| |||| ||||    
T  13570659 aggctaaagtgcatttttctacccataactttcaaaaacttgcaattttagtcccttaagtacaaaaactataattttggtcccccaagaattag 13570565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 22587525 - 22587594
Alignment:
Q  239 taacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||| ||||| || ||||||||| | ||||  ||||||||||||||||||||||||||||||||||||    
T  22587525 taactttcaaaaagttccaattttggtcccctat-tacaaaaactacaattttggccccctaagatttagc 22587594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 28617946 - 28618015
Alignment:
Q  239 taacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||| ||||  |||||||||||||| || ||||||||||||| ||||||| |||||||||||||||||    
T  28617946 taactttcaaaatcttgcaattttggccccccaagtacaaaaacttcaatttt-gccccctaagatttagc 28618015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 309
Target Start/End: Original strand, 1033212 - 1033303
Alignment:
Q  216 gctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||| ||||||||||||| |||||||||||| |||||||||||||| ||||| ||| |||| || |||||   ||| ||||||||||||    
T  1033212 gctaaagtgtacttttcccccct-aacttttaaaaacttgcaattttggcc-cctaaataccaaaattataatttaacccctctaagatttagc 1033303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 306
Target Start/End: Complemental strand, 810850 - 810791
Alignment:
Q  247 aaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattt 306  Q
    ||||| |||||||||||||| |||  |||||||||||||||||||| ||| |||||||||    
T  810850 aaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccctctaagattt 810791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 1093248 - 1093153
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||| | |||||||||||||||||||||||  |||||||| ||    ||||  |||||||| |||||||||  ||| ||||||||||||    
T  1093248 taggctaaagtgta-ttttccccccttaacttttaaaatgttgcaattgtgattccctatatacaaaaattacaattttaacccgctaagatttagc 1093153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 21837355 - 21837298
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaag 273  Q
    |||||||||||||||||| ||||  ||||||| ||||| |||||||||||||| ||||||    
T  21837355 aggctaaagtgcactttttcccc--taactttcaaaaacttgcaattttggccccctaag 21837298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 308
Target Start/End: Original strand, 32739710 - 32739744
Alignment:
Q  274 tacaaaaactacaattttggccccctaagatttag 308  Q
    |||||||||||||||||||||||| ||||||||||    
T  32739710 tacaaaaactacaattttggccccttaagatttag 32739744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 25298804 - 25298885
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccct 299  Q
    ||||||||||||||| |||| ||  ||||||||  |||| ||||||||||||||   | ||||| | |||||||||||||||    
T  25298804 taaagtgcacttttcgccccctatgttttaaaatgttgcgattttggcctcctattaaaaaaaattgcaattttggccccct 25298885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 26829390 - 26829333
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctccta 271  Q
    |||||||||||||||||||  ||||||| ||||||||  |||| ||||||||| ||||    
T  26829390 aggctaaagtgcacttttcatcccttaagttttaaaatgttgcgattttggcccccta 26829333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 1091657 - 1091713
Alignment:
Q  205 ttaaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattt 261  Q
    ||||| |||||| ||||||||| |||  ||||||||||||||||||  |||||||||    
T  1091657 ttaaaatataggttaaagtgcattttctcccccttaacttttaaaatgttgcaattt 1091713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 309
Target Start/End: Complemental strand, 8535752 - 8535663
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||| ||||||||| ||  ||||||||||||| ||| |||||||  |   |||||| | |||||||||||||| |||||||||| |||||    
T  8535752 taaagtacacttttcctcc--taacttttaaaaacttgtaattttgatcctttaagtagagaaactacaattttgaccccctaagaattagc 8535663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 25523067 - 25523163
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||    
T  25523067 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttgaccccctaagatttagc 25523163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 214 - 309
Target Start/End: Original strand, 19752911 - 19753005
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  19752911 aggctaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctatgatttagc 19753005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 16650958 - 16650862
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||| |||||||||| ||||||    
T  16650958 taggctaaagtgcacttttccacccttaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttagccccctaaggtttagc 16650862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 18487005 - 18486909
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||| |||||||||||||| ||||| |||||||||||||| |||||||| | |||| ||||||||||||||||||||||||||    
T  18487005 taggctaaagtgcactttcccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggccccctaagatttagc 18486909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 212 - 307
Target Start/End: Complemental strand, 40255776 - 40255681
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    |||||||||||||||||||||||| ||||| ||||||||| ||||||||||| || ||||| |||| |||||||||||||||||||||||||||||    
T  40255776 ataggctaaagtgcacttttcccctcttaatttttaaaaacttgcaattttgaccccctaaatacagaaactacaattttggccccctaagattta 40255681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 36486590 - 36486496
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttag 308  Q
    ||||| |||||||||||| ||||| ||||||||||||| ||||||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  36486590 aggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttag 36486496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 28538674 - 28538770
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||| ||| ||||||| ||||| ||||||||||| || | |||||||||||||||||||||| |||||||||||||||||    
T  28538674 taggctaaagtgcacttttccacccgtaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttagccccctaagatttagc 28538770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 212 - 302
Target Start/End: Complemental strand, 25524232 - 25524141
Alignment:
Q  212 ataggctaaagtgcacttttcccccct-taacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaag 302  Q
    ||||||||||||||||||||||||||  ||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||    
T  25524232 ataggctaaagtgcacttttcccccccctaatttttaaaaatttgtaattttggccccctaagtacaaaaactacaattttggcctcctaag 25524141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 22940723 - 22940641
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggcccc 297  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||||| ||||    
T  22940723 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaattacaattttgacccc 22940641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 212 - 309
Target Start/End: Complemental strand, 33160390 - 33160293
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||||||||||| ||| ||||| |||||||||| ||| |||||||| | |||||||||||||| |||| |||||||||||    
T  33160390 ataggctaaagtgcacttttccccccttaattttcaaaaacttgcaattttagccccctaagtatagaaactacaattttgaccccttaagatttagc 33160293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 206 - 309
Target Start/End: Complemental strand, 5778946 - 5778843
Alignment:
Q  206 taaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatt 305  Q
    |||||| ||||||||||||||||||||||||  ||||||| ||||| |||||||||| ||| ||||||||| ||||| ||||||| | ||||||||||||    
T  5778946 taaattgtaggctaaagtgcacttttccccctctaactttcaaaaacttgcaatttttgccccctaagtaccaaaaccacaatttagcccccctaagatt 5778847  T
Q  306 tagc 309  Q
    ||||    
T  5778846 tagc 5778843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 212 - 309
Target Start/End: Complemental strand, 19754235 - 19754137
Alignment:
Q  212 ataggctaaagtgcacttttc-cccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||| ||||  ||||| ||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||    
T  19754235 ataggctaaagtgcatttttttcccccctaactttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttggccccctatgatttagc 19754137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 218 - 308
Target Start/End: Complemental strand, 28539917 - 28539828
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttag 308  Q
    ||||||||| ||||||||||| |||||||||||| ||||||||||| ||  ||||||||||||||||||||||||| ||||||||||||||    
T  28539917 taaagtgcatttttcccccct-aacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaattttggtcccctaagatttag 28539828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 7311588 - 7311684
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||    |||||| ||||||| ||||| ||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  7311588 taggctaaagtgcacccccccccccctaactttcaaaaacttgcaatattggcctcccaagtacaaaaactacaattttagccccctaagatttagc 7311684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 307
Target Start/End: Original strand, 24332903 - 24333005
Alignment:
Q  205 ttaaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagat 304  Q
    |||||| | ||| |||||||||||||| ||||||||| ||| ||||| |||||||||||||| | || |||||||||||||||||||| ||| |||||||    
T  24332903 ttaaataaaaggttaaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagat 24333002  T
Q  305 tta 307  Q
    |||    
T  24333003 tta 24333005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 309
Target Start/End: Complemental strand, 25056482 - 25056388
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||| | | ||||||| ||||| ||||||||||| || ||||||||  ||||||||||||||| ||||||||||||||||    
T  25056482 ggctaaagtgcacttttccactcctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagc 25056388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 217 - 307
Target Start/End: Original strand, 36485302 - 36485392
Alignment:
Q  217 ctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    |||||||||| |||||| ||| ||||||| ||||| || |||||||| |||| ||||||||||||||| ||||||||||||||||||||||    
T  36485302 ctaaagtgcatttttccacccctaactttaaaaaacttacaattttgacctcttaagtacaaaaactataattttggccccctaagattta 36485392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 20216866 - 20216770
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||| |||||||||||||||||||||||| ||| ||||| |||||||||| ||  ||||  ||||||||||||||||||||||||| |||| |||||    
T  20216866 taggttaaagtgcacttttccccccttaattttcaaaaacttgcaattttagctccctatatacaaaaactacaattttggccccccaagaattagc 20216770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 309
Target Start/End: Original strand, 42195137 - 42195226
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||| |||||||| ||||| |||| ||||||||| |||| |||||||| |||||||||||| |||||||||||||||    
T  42195137 taaagtgcacttttccccc-ttaacttt-aaaaagttgcgattttggccccctatgtacaaaatctacaattttggtcccctaagatttagc 42195226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 213 - 290
Target Start/End: Original strand, 5730439 - 5730517
Alignment:
Q  213 taggctaaagtgcacttttcccc-ccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattt 290  Q
    ||||||||||||||||||||||| |||||||||| ||||| ||||||||||||| |||||||||| ||||| |||||||    
T  5730439 taggctaaagtgcacttttcccccccttaactttcaaaaacttgcaattttggcttcctaagtaccaaaaccacaattt 5730517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 211 - 309
Target Start/End: Original strand, 25055408 - 25055506
Alignment:
Q  211 tataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||||||  ||||||| ||    |||||||||||  | |||| ||| |||||||||||||||||||||||||||||||||    
T  25055408 tataggctaaagtgcacttttccccctctaactttaaacttcttgcaattttgatcccctatgtataaaaactacaattttggccccctaagatttagc 25055506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 211 - 309
Target Start/End: Complemental strand, 42196305 - 42196207
Alignment:
Q  211 tataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||| |||||| ||||||||||||| |||  | |||||||  ||| |||||||||||||| |||| | |||||||||||||||    
T  42196305 tataggctaaagtgcactttcccccccctaacttttaaaaagttgtgaatttggccctctatgtacaaaaactacatttttagtcccctaagatttagc 42196207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 292
Target Start/End: Original strand, 1796054 - 1796131
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttg 292  Q
    |||||||||||| |||||| ||| ||||||| ||||| |||||| ||||||| |||||||||||||||||||||||||    
T  1796054 ggctaaagtgcatttttccacccctaactttcaaaaacttgcaactttggccacctaagtacaaaaactacaattttg 1796131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 5777899 - 5777993
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||| |||||  ||||||| ||||| ||||||||||| || ||||||||| ||||| ||||||| | ||||||||||||||||    
T  5777899 taggctaaagtgcactttcccccc--taactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagc 5777993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 305
Target Start/End: Original strand, 33158097 - 33158188
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatt 305  Q
    ||||||||||||| ||||  |||| ||||||| ||||| ||||||||||| |  ||||||||||||||||||||||||| |||| |||||||    
T  33158097 aggctaaagtgcatttttttccccctaactttcaaaaacttgcaattttgacaccctaagtacaaaaactacaattttgaccccttaagatt 33158188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 20214196 - 20214277
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggcccc 297  Q
    ||||||||||||||||||||| ||||||||| ||||| |||||||||| ||   ||| |||||||||||||||||||||||||    
T  20214196 ggctaaagtgcacttttcccc-cttaactttcaaaaacttgcaattttagcactctatgtacaaaaactacaattttggcccc 20214277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 309
Target Start/End: Complemental strand, 2686501 - 2686408
Alignment:
Q  218 taaagtgcacttttcccc-cct-taacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||| |||| ||| ||||||||||||| |||||||||||  ||| ||||||||||||||| |||||||| |||||| ||||||||    
T  2686501 taaagtgcactttccccctcctctaacttttaaaaacttgcaattttgatctcttaagtacaaaaactataattttggtcccctatgatttagc 2686408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 309
Target Start/End: Original strand, 18154491 - 18154586
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||| ||||||  |||||||||||| ||||| || |||||||| || |||||||||||||||||||||||| |||| |||| |||||||    
T  18154491 ataggctaaagtgaacttttttccccttaactttcaaaaacttacaattttgacc-cctaagtacaaaaactacaatttt-gccctctaaaatttagc 18154586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 25524158 - 25524105
Alignment:
Q  256 caattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  25524158 caattttggcctcctaagtacaaaaactataattttgaccccctaagatttagc 25524105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 293
Target Start/End: Original strand, 18485137 - 18485216
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttgg 293  Q
    |||||||||||||||||| ||||  ||||||| ||||| |||||||||||||| ||||||||  ||||| ||||||||||    
T  18485137 aggctaaagtgcactttttcccctctaactttaaaaaacttgcaattttggccccctaagtatcaaaacaacaattttgg 18485216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 1015483 - 1015577
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttag 308  Q
    |||| ||| ||||||||||| ||| ||||||||||||| || ||||||||||| |||  |||||||| ||||||||||  |||||||||| ||||    
T  1015483 aggcaaaaatgcacttttcctcccctaacttttaaaaagttacaattttggccccctgtgtacaaaacctacaattttaaccccctaagaattag 1015577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 308
Target Start/End: Original strand, 38834090 - 38834179
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttag 308  Q
    ||||||||| ||||  |||||||||||||||||| |||| |||||| || | || ||||||||||||||||||| || |||||||||||||    
T  38834090 taaagtgcatttttttccccttaacttttaaaaagttgcgattttgacc-cttatgtacaaaaactacaattttagctccctaagatttag 38834179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 214 - 307
Target Start/End: Original strand, 21835040 - 21835132
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    ||||||||||||||||| |||| || || ||| ||||| |||  |||||| || |||| |||||||||||||||||||| ||||||||||||||    
T  21835040 aggctaaagtgcactttccccctct-aagtttgaaaaagttgtgattttgaccccctatgtacaaaaactacaattttgaccccctaagattta 21835132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 309
Target Start/End: Original strand, 2186774 - 2186864
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||| |||| |||||| || ||| ||||| |||||||||||| || ||| |||||||||||||||||||   |||||||||||||||    
T  2186774 taaagtgcattttttccccct-aagtttcaaaaagttgcaattttggtcttctatgtacaaaaactacaattttaatcccctaagatttagc 2186864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 309
Target Start/End: Complemental strand, 5962671 - 5962579
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||| || |  | ||||| ||||||||| |||||||| | ||||||||||||||||| |||||| ||| ||||| |||||||    
T  5962671 ggctaaagtgcactttttccac--tgactttcaaaaatttgtaattttggtcccctaagtacaaaaactataattttagccacctaatatttagc 5962579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 297
Target Start/End: Complemental strand, 2373460 - 2373367
Alignment:
Q  204 attaaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggcccc 297  Q
    |||||| | ||||||||| ||||||||||  ||| ||| ||| ||||| |||| ||||||||||||||  || |||||  ||||||||||||||    
T  2373460 attaaaatttaggctaaactgcacttttcaacccctaagtttcaaaaagttgcgattttggcctcctatttaaaaaaaggacaattttggcccc 2373367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 31576664 - 31576615
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttg 263  Q
    ||||||||||||||||||| |||||||| ||||||||| |||| ||||||    
T  31576664 aggctaaagtgcacttttcaccccttaagttttaaaaagttgcgattttg 31576615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 287
Target Start/End: Complemental strand, 41663831 - 41663754
Alignment:
Q  210 ttataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaa 287  Q
    |||| |||||||||||| ||||| ||| |||| ||||||||| |||| ||||||||| |||||| | ||||| |||||    
T  41663831 ttattggctaaagtgcatttttcaccctttaagttttaaaaagttgcgattttggccccctaagaaaaaaaattacaa 41663754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 2373138 - 2373194
Alignment:
Q  206 taaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaatttt 262  Q
    |||||| ||| |||||||||||||||| |||||||| ||||||||| |||| |||||    
T  2373138 taaattttagactaaagtgcacttttcaccccttaagttttaaaaagttgcgatttt 2373194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 307
Target Start/End: Complemental strand, 5730931 - 5730871
Alignment:
Q  247 aaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    ||||| || ||||||||||| ||||||||| ||||| ||||||| | ||||||||||||||    
T  5730931 aaaaacttccaattttggccccctaagtaccaaaaccacaatttagtccccctaagattta 5730871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 307
Target Start/End: Complemental strand, 21835019 - 21834928
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    |||||||||||||||||||||  | || ||| ||||| |||||| |||| ||| ||| | ||||||||||||||||| || ||||| ||||||    
T  21835019 ggctaaagtgcacttttcccctat-aagtttgaaaaagttgcaaatttgaccttctatgaacaaaaactacaattttagctccctacgattta 21834928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 292
Target Start/End: Complemental strand, 1016966 - 1016887
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttg 292  Q
    |||| ||||||| | ||||  |||| ||| ||||||||| ||| |||||||| || ||| ||||||||||||||||||||    
T  1016966 taggttaaagtgtatttttttccccctaatttttaaaaaattgtaattttggtcttctatgtacaaaaactacaattttg 1016887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 1797375 - 1797304
Alignment:
Q  238 ttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||| ||||||||| |||||||||||||  | ||   ||||||||||||||||||| ||| |||||||||||    
T  1797375 ttaagttttaaaaacttgcaattttggctccttataaacaaaaactacaattttggtcccttaagatttagc 1797304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 307
Target Start/End: Original strand, 16650045 - 16650084
Alignment:
Q  268 cctaagtacaaaaactacaattttggccccctaagattta 307  Q
    ||||||||||||||||||||||||| ||| ||||||||||    
T  16650045 cctaagtacaaaaactacaattttgaccctctaagattta 16650084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 289
Target Start/End: Original strand, 34893689 - 34893739
Alignment:
Q  239 taacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaatt 289  Q
    ||||||| ||||| |||||||||||||  |||| |||||||||||||||||    
T  34893689 taactttcaaaaacttgcaattttggctccctatgtacaaaaactacaatt 34893739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 251
Target Start/End: Complemental strand, 38476783 - 38476745
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaa 251  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  38476783 taggctaaagtgcacttttcaccccttaagttttaaaaa 38476745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 263
Target Start/End: Complemental strand, 23040344 - 23040292
Alignment:
Q  211 tataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttg 263  Q
    ||||||||||||| ||||||||  ||||||| ||||||||| |||| ||||||    
T  23040344 tataggctaaagtacacttttcatcccttaagttttaaaaagttgcgattttg 23040292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 1e-35; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 1963194 - 1963290
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||    
T  1963194 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttggcctcctatgtacaaaaactacaattttagccccctaagaattagc 1963290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 218 - 309
Target Start/End: Complemental strand, 35935631 - 35935540
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||    
T  35935631 taaagtgcactttcccccccttaacttttaaaaatttgcaattttagccccctaagtacataaactacaattttggccccctaagatttagc 35935540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 213 - 307
Target Start/End: Complemental strand, 1290301 - 1290207
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    ||||||||||||||||||||||||||||||||| ||||  ||||||||||||||  ||||||||||||||||||||||| |||||||||||||||    
T  1290301 taggctaaagtgcacttttccccccttaactttcaaaatcttgcaattttggccctctaagtacaaaaactacaattttagccccctaagattta 1290207  T

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Target: chr4; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 217 - 309
Target Start/End: Complemental strand, 19750673 - 19750582
Alignment:
Q  217 ctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||    
T  19750673 ctaaagtgcacttttcccccct-aacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaagatttagc 19750582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 217 - 309
Target Start/End: Original strand, 19789133 - 19789224
Alignment:
Q  217 ctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||    
T  19789133 ctaaagtgcacttttcccccct-aacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaagatttagc 19789224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 218 - 309
Target Start/End: Complemental strand, 8758935 - 8758844
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||| ||||||||||||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||    
T  8758935 taaaatgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccccttaagatttagc 8758844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 214 - 309
Target Start/End: Original strand, 31599788 - 31599883
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||| |||||||||||| ||||| ||||||||||||| ||||||||||| || |||||||||||||||||||||||||| |||||||||||||||    
T  31599788 aggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttagc 31599883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 215 - 309
Target Start/End: Complemental strand, 10471489 - 10471395
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| ||||| ||||||| | ||||||||||||||||    
T  10471489 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagc 10471395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 26421724 - 26421629
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||| || |||||| ||||| ||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||    
T  26421724 taggctaaagtgcacttttcccctct-aactttcaaaaacttgcaattttgacctcctaagtacaaaaactacaattttgaccccttaagatttagc 26421629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 48780246 - 48780342
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||| || ||||||||| ||||| ||||||| | ||||||||||||||||    
T  48780246 taggctaaagtgcacttttccccccctaacttttaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagc 48780342  T

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Target: chr4; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 218 - 309
Target Start/End: Original strand, 12129626 - 12129717
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||| ||||||||| ||||| |||||||||||||| | ||||||||||||||||||||||| |||| |||||||||||    
T  12129626 taaagtgcacttttcccctcttaactttcaaaaacttgcaattttggccccgtaagtacaaaaactacaattttgaccccttaagatttagc 12129717  T

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Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 309
Target Start/End: Complemental strand, 31601086 - 31600992
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||| ||||  ||||||||||||| ||||||||||| || ||||||||||||||||||||||||| |||| |||||||||||    
T  31601086 ggctaaagtgcactttttcccctctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgaccccttaagatttagc 31600992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 49308130 - 49308038
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattt 306  Q
    ||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| |||||||||||||||||||||||| |||||||| |||||    
T  49308130 ataggctaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggccccctaagtacaaaaactacaatttt-gccccctatgattt 49308038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 209 - 309
Target Start/End: Complemental strand, 17388317 - 17388218
Alignment:
Q  209 attataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttag 308  Q
    |||||||||||||||||||||||||||||| |||||| ||||| |||||||||||| | | |||||||| |||||||||||||||||||| |||| ||||    
T  17388317 attataggctaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggtcccttaagtacataaactacaattttggccccccaagaattag 17388219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 225 - 309
Target Start/End: Complemental strand, 21539162 - 21539078
Alignment:
Q  225 cacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||| ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||    
T  21539162 cacttttccacccttaatttttaaaaacttgcaattttggcctcctaagtgtaaaaactacaattttgaccccctaagatttagc 21539078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 25685925 - 25685829
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||||  ||||||| ||||| |||||||||||||| ||||||||| ||||| ||||||| | ||||||||||||||||    
T  25685925 taggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagaccccctaagatttagc 25685829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 209 - 309
Target Start/End: Complemental strand, 52491714 - 52491614
Alignment:
Q  209 attataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttag 308  Q
    |||||||||||||||| |||||||| ||||||||||| ||||| |||||||||||| |  |||| |||| ||||||||||||||||||||||| ||||||    
T  52491714 attataggctaaagtgtacttttccacccttaactttcaaaaacttgcaattttggtcctctaaatacagaaactacaattttggccccctaaaatttag 52491615  T
Q  309 c 309  Q
    |    
T  52491614 c 52491614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 1835205 - 1835109
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||  || ||||||| ||||| ||||||||||| || ||||||||  ||||||||||||||| ||||||||||||||||    
T  1835205 taggctaaagtgcacttttccatccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagc 1835109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 215 - 303
Target Start/End: Complemental strand, 1964542 - 1964454
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaaga 303  Q
    ||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||| | ||||||||||||||||||| ||| |||||    
T  1964542 ggctaaagtgcacttttccacccttaacttttaaaaagttacaattttggccccctatgaacaaaaactacaattttggtcccttaaga 1964454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 13509461 - 13509366
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||| ||||||||||||| |||||||||||| |||||||||||||| || |||||  |||||||||||||||  |||||||||||||||    
T  13509461 taggctaaagtgtacttttcccccct-aacttttaaaaaattgcaattttggccccccaagtatgaaaactacaattttgatcccctaagatttagc 13509366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 211 - 303
Target Start/End: Original strand, 17382989 - 17383080
Alignment:
Q  211 tataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaaga 303  Q
    |||||||||||||||||||||| ||||| |||||| ||||| |||||||||||| | | ||||||||||||||||||||||||||||| ||||    
T  17382989 tataggctaaagtgcacttttctcccct-aactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccccccaaga 17383080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 309
Target Start/End: Original strand, 10470545 - 10470640
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||| ||  |||||||| ||||  ||||||| | ||||||||||||||||    
T  10470545 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccctctaagtaccaaaatcacaatttagcccccctaagatttagc 10470640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 25684934 - 25685028
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||| ||||||| ||||| ||||||||||| ||  |||||||| ||||| ||||||| | ||||||||||||||||    
T  25684934 ggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaatttagcccccctaagatttagc 25685028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 218 - 309
Target Start/End: Original strand, 8155741 - 8155831
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggc-ctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||  ||||||| ||||| |||||||||| || | ||||||| ||||||||||||||||||||||||||||||||||    
T  8155741 taaagtgcacttttccccc--taactttcaaaaacttgcaattttagctcccctaagttcaaaaactacaattttggccccctaagatttagc 8155831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 37728672 - 37728572
Alignment:
Q  208 aattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    |||| |||| ||||||||| |||| || ||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||  |||||||||    
T  37728672 aattttaggttaaagtgcattttttcctcct-aacttttaaaaagttgcaattttggcctcctatgtacaaaaactacaattttgaccctttaagattta 37728574  T
Q  308 gc 309  Q
    ||    
T  37728573 gc 37728572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 5526228 - 5526133
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||| || |||||| ||||| |||||||||||||| ||||||||  ||||| ||||||| | ||||||||||||||||    
T  5526228 taggctaaagtgcacttttcccctct-aactttcaaaaacttgcaattttggccccctaagtaacaaaaccacaatttagcccccctaagatttagc 5526133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 8757673 - 8757768
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||| |||| |||||||| ||||| || ||||||| ||| |||||||||| ||||||||||||||| ||| |||||||||||    
T  8757673 taggctaaagtgcactttttcccc-ttaactttcaaaaacttacaattttagccccctaagtacagaaactacaattttggacccttaagatttagc 8757768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 1834119 - 1834214
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttgg-ccccctaagatttagc 309  Q
    ||||||||||||||||||||||  ||||||| ||||| || |||||||| || |||| ||| ||||||||||||||||| ||||||||||||||||    
T  1834119 ggctaaagtgcacttttccccctctaactttaaaaaacttacaattttgaccccctatgtataaaaactacaattttggcccccctaagatttagc 1834214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 10447006 - 10447101
Alignment:
Q  215 ggctaaagtgcacttttccccc-cttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||| ||||| ||| ||||| |||||||||| ||| |||| |||||||||| ||||||||  ||||||||||||||||    
T  10447006 ggctaaagtgcacttttccccctcttaagtttcaaaaagttgcaattttagccccctatgtacaaaaaccacaattttacccccctaagatttagc 10447101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 309
Target Start/End: Complemental strand, 48781147 - 48781053
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||||  ||||||| |||||||||||||||||| | ||||||||| ||||| ||||||| | |||||||| |||||||    
T  48781147 aggctaaagtgcacttttccccctctaactttcaaaaatttgcaattttggtc-cctaagtactaaaaccacaatttagcccccctaaaatttagc 48781053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 309
Target Start/End: Original strand, 5525359 - 5525453
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||| || ||||||||||| |||||| ||||| ||||||||||| || ||||||||| ||||| ||||||| | ||||||||||||||||    
T  5525359 aggctaaagtacatttttcccccct-aactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagc 5525453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 13386012 - 13386110
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaat-ttgcaattttggcctcctaagtacaaaaactacaattt-tggccccctaagatttagc 309  Q
    ||||||||||||||||||||||||  ||||||| |||||  |||||||||||||| ||||||||| ||||| ||||||| |  ||||||||||||||||    
T  13386012 taggctaaagtgcacttttccccctctaactttcaaaaaacttgcaattttggccccctaagtaccaaaaccacaatttatccccccctaagatttagc 13386110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 1289085 - 1289189
Alignment:
Q  203 tattaaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaag 302  Q
    |||||| || |||| ||||||| |||||||||||||||||||| ||| ||||| |||||||  |  ||||||| ||||||||||||||| ||| | ||||    
T  1289085 tattaagttttaggttaaagtgaacttttccccccttaactttcaaatatttgtaattttgatcctctaagtataaaaactacaattttagcctcttaag 1289184  T
Q  303 attta 307  Q
    |||||    
T  1289185 attta 1289189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 10448363 - 10448267
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||  || ||| ||| ||| ||||| |||| ||||| ||| |||| |||||||||||||||||||||||| ||||||| ||||    
T  10448363 taggctaaagtgcacttcccctcccctaagtttcaaaaagttgcgattttagccccctatgtacaaaaactacaattttggccctctaagatatagc 10448267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 309
Target Start/End: Complemental strand, 13386635 - 13386539
Alignment:
Q  214 aggctaaagtgcactttt-ccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||| |||||| ||||||| ||||| ||||||||||| || | ||||||| ||||| ||||||| | ||||||||||| ||||    
T  13386635 aggctaaagtgcactttttccccccctaactttcaaaaacttgcaattttgaccccataagtaccaaaaccacaatttagcccccctaagatctagc 13386539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 309
Target Start/End: Complemental strand, 3928960 - 3928865
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||||| ||||||| ||||  |||| ||||||||| |||| |||  ||||| ||||||||||||| ||| | ||||||    
T  3928960 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccctatgtatgaaaaccacaattttggccctctatgttttagc 3928865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 21177995 - 21178090
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||| ||||| ||||||| |||||| | ||| |||||||||||  | |||| | |||||||||||||||||| |||||||| |||||||    
T  21177995 taggctaaagtgtactttccccccct-aactttcataaagttgcaattttgatcccctatgaacaaaaactacaattttgaccccctaaaatttagc 21178090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 309
Target Start/End: Original strand, 35934347 - 35934436
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||  ||||||| ||||| ||| |||||||| | |||||||| | ||| || |||||||||||| |||||||||||    
T  35934347 taaagtgcacttttccccc--taactttcaaaaacttgtaattttggtcccctaagtaaagaaattataattttggccccttaagatttagc 35934436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 293
Target Start/End: Original strand, 3927665 - 3927744
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttgg 293  Q
    |||||||||||||||||||||||  ||||||||||||  |||| ||||||||| || | |||  ||||||||||||||||    
T  3927665 aggctaaagtgcacttttccccctctaacttttaaaatgttgcgattttggccccccatgtatgaaaactacaattttgg 3927744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 292
Target Start/End: Original strand, 49306773 - 49306851
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttg 292  Q
    |||||||||||||||||||  ||||  |||||| ||||| ||||||||||||||   |||||||||||||||||||||||    
T  49306773 taggctaaagtgcacttttttccccc-aactttcaaaaacttgcaattttggccatttaagtacaaaaactacaattttg 49306851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 309
Target Start/End: Complemental strand, 50909774 - 50909679
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccc-taagatttagc 309  Q
    ||||||||||||||||| || || ||| ||||||||| |||| |||||| |  |||| ||| |||||||||||||||| ||||| |||||||||||    
T  50909774 ggctaaagtgcactttttccaccctaagttttaaaaagttgcgattttgactccctatgtataaaaactacaattttgacccccttaagatttagc 50909679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 54110705 - 54110635
Alignment:
Q  239 taacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||| ||||||||||||||||| ||||| | ||||||||| || |||||| ||||||||| |||||||    
T  54110705 taactttaaaaaatttgcaattttgacctccaatgtacaaaaattataattttagccccctaaaatttagc 54110635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 229 - 309
Target Start/End: Complemental strand, 27258047 - 27257967
Alignment:
Q  229 tttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||| |||||||||||||||||| ||||||||||| ||  |||  |||||||||| |||||||  |||| |||||||||||    
T  27258047 tttctccccttaacttttaaaaagttgcaattttgaccctctatatacaaaaactccaattttaaccccttaagatttagc 27257967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 309
Target Start/End: Complemental strand, 33310187 - 33310096
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||  ||   ||||||||||||| ||| |||||| ||  ||||| ||||||||||| ||||||||||| ||| ||||||||    
T  33310187 ggctaaagtgcacttttttcc---taacttttaaaaacttgtaattttagctccctaaatacaaaaactataattttggccctctatgatttagc 33310096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 50909270 - 50909365
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttag 308  Q
    ||||||||||||| | ||||  ||||| || ||||||||| ||||||||||| |||||||  || |||||||||||||||  || ||||||||||||    
T  50909270 ataggctaaagtgtatttttttcccct-aagttttaaaaagttgcaattttgacctcctatatataaaaactacaattttaacctcctaagatttag 50909365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 308
Target Start/End: Original strand, 37727700 - 37727789
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttag 308  Q
    ||||||| | ||||| || ||||||||||||||| ||| |||||||| ||| ||  ||||||||||||||||||  |||| ||||||||||    
T  37727700 taaagtgtatttttctcctcttaacttttaaaaagttgtaattttgg-ctcttatatacaaaaactacaattttaaccccttaagatttag 37727789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 298
Target Start/End: Complemental strand, 55603633 - 55603549
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccc 298  Q
    |||| |||||||||||||| |||| |||||||| ||||| ||||||||||   | |||  ||||||||||||| ||||||||||||    
T  55603633 taggttaaagtgcactttttcccc-ttaactttcaaaaacttgcaattttaatcccctgtgtacaaaaactactattttggccccc 55603549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 290
Target Start/End: Original strand, 14868889 - 14868964
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattt 290  Q
    |||||||||||||||||||||||| || |||| ||||  ||||||||||||||  |||||||  ||||| |||||||    
T  14868889 aggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaattt 14868964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 290
Target Start/End: Complemental strand, 14877045 - 14876970
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattt 290  Q
    |||||||||||||||||||||||| || |||| ||||  ||||||||||||||  |||||||  ||||| |||||||    
T  14877045 aggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaattt 14876970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 308
Target Start/End: Complemental strand, 46638805 - 46638733
Alignment:
Q  236 ccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttag 308  Q
    |||||||||| ||||| ||| |||||||  | |||| | ||||||| ||||||||| ||||||||||||||||    
T  46638805 ccttaactttcaaaaagttggaattttgatcccctatgaacaaaaattacaattttagccccctaagatttag 46638733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 266
Target Start/End: Complemental strand, 51291472 - 51291421
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcc 266  Q
    ||||||||| || ||||| |||||||| ||||||||| ||||||||||||||    
T  51291472 ggctaaagtccaattttcaccccttaagttttaaaaagttgcaattttggcc 51291421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 14804598 - 14804541
Alignment:
Q  211 tataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctc 268  Q
    |||||| | ||||||| ||||  | |||||||||||||||| ||||||||||||||||    
T  14804598 tataggtttaagtgcattttttacaccttaacttttaaaaaattgcaattttggcctc 14804541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 20919633 - 20919584
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttg 263  Q
    ||||||||||||| ||||| |||||||| ||||||||| |||| ||||||    
T  20919633 aggctaaagtgcatttttcaccccttaagttttaaaaagttgcgattttg 20919584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 4e-35; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 214 - 309
Target Start/End: Complemental strand, 54540892 - 54540797
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||| || | ||||||||||||||||||||||||||||||||||||||||    
T  54540892 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttggccccctaagatttagc 54540797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 208 - 307
Target Start/End: Original strand, 29931219 - 29931318
Alignment:
Q  208 aattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||| |||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||    
T  29931219 aattataggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccccctaagattta 29931318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 208 - 307
Target Start/End: Original strand, 29980373 - 29980472
Alignment:
Q  208 aattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||| |||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||    
T  29980373 aattataggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccccctaagattta 29980472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 213 - 307
Target Start/End: Original strand, 7758400 - 7758494
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||||||||| || |||||||||||||||||||||||| |||||||||||||||    
T  7758400 taggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttttgccccctaagattta 7758494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 7267642 - 7267737
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||| |||||||||||||||||| ||||||||| ||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  7267642 taggttaaagtgcacttttcccc-cttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccccctaagatttagc 7267737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 206 - 309
Target Start/End: Complemental strand, 22776922 - 22776819
Alignment:
Q  206 taaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatt 305  Q
    |||| ||||||||||||||||||||||| ||| ||||||| | ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||| |    
T  22776922 taaaatataggctaaagtgcacttttccacccctaactttcagaaagttgcaattttggccccctatgtacaaaaactacaattttggccccctaagaat 22776823  T
Q  306 tagc 309  Q
    ||||    
T  22776822 tagc 22776819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 534497 - 534593
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||| ||||  ||||| | ||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  534497 taggctaaagtgcactttttcccctctaactctcaaaaacttgcaattttgacctcctatgtacaaaaactacaattttggccccctaagatttagc 534593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 7268930 - 7268835
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttag 308  Q
    ||||| ||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||    
T  7268930 ataggttaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggcctcctaagtatagaaactacaattttggcctcctaagatttag 7268835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 214 - 309
Target Start/End: Complemental strand, 12703601 - 12703507
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||| ||| || |||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  12703601 aggctaaagtgcactttttccctct-aactttcaaaaatttgtaattttggccccctaagtacaaaaactacaattttggccccctatgatttagc 12703507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 206 - 309
Target Start/End: Original strand, 47614176 - 47614279
Alignment:
Q  206 taaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatt 305  Q
    |||||||| ||||||||||||||||| ||||  ||||||| ||||| |||||||||||||| ||||||||  ||||| ||||||||||||||||||||||    
T  47614176 taaattattggctaaagtgcactttttcccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccctaagatt 47614275  T
Q  306 tagc 309  Q
    ||||    
T  47614276 tagc 47614279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 29932800 - 29932707
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttag 308  Q
    |||||||||||||||||||||||  ||||||| ||||| |||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||    
T  29932800 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcc-cctaagtacaaaaactacaattttgaccccttaagatttag 29932707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 29981954 - 29981861
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttag 308  Q
    |||||||||||||||||||||||  ||||||| ||||| |||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||    
T  29981954 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcc-cctaagtacaaaaactacaattttgaccccttaagatttag 29981861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 12700173 - 12700267
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||| |||||  ||||||| ||||| |||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||    
T  12700173 taggctaaagtgcactttcccccc--taactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgaccccctatgatttagc 12700267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 205 - 309
Target Start/End: Complemental strand, 47610691 - 47610587
Alignment:
Q  205 ttaaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagat 304  Q
    ||||| |||||| |||||||||||||||||||  ||||||| ||||| |||||||||||||| ||||||||| ||||| ||||||| | |||||||||||    
T  47610691 ttaaaatataggttaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagat 47610592  T
Q  305 ttagc 309  Q
    |||||    
T  47610591 ttagc 47610587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 211 - 303
Target Start/End: Complemental strand, 51038895 - 51038803
Alignment:
Q  211 tataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaaga 303  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || |||| | ||||||||||||||||||| ||| |||||    
T  51038895 tataggctaaagtgcacttttccacccttaacttttaaaaagttgcaattttgaccccctatgaacaaaaactacaattttggtcccttaaga 51038803  T

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Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 19984846 - 19984941
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    |||||||||||||||||||||||||| ||| ||| ||||| |||||||||||||| |||| |||||||||||||||||||| |||  |||||||||    
T  19984846 ataggctaaagtgcacttttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttgaccctttaagattta 19984941  T

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Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 309
Target Start/End: Original strand, 24516459 - 24516554
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||| ||||||||||||| ||||| ||||||| ||||| |||||||||||||  |||||||| ||||||||||||||||||||| |||||||||||    
T  24516459 aggccaaagtgcactttttcccccctaactttaaaaaacttgcaattttggcaccctaagtataaaaactacaattttggccccttaagatttagc 24516554  T

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Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 309
Target Start/End: Original strand, 54539754 - 54539849
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||| ||||||||||| ||||| ||||||||||  || ||||| |||||||||||||||||||  |||||||||||||||    
T  54539754 aggctaaagtgcacttttccacccttaactttcaaaaacttgcaattttaaccccctaaatacaaaaactacaattttgatcccctaagatttagc 54539849  T

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Target: chr3; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 46719941 - 46720035
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||| |||||||||||||||||||||||| |||| ||||||||| |||| ||| ||||||||||||||| | || ||||||||||||    
T  46719941 ggctaaagtgcatttttccccccttaacttttaaaaagttgcgattttggccccctatgtataaaaactacaattttagtcctctaagatttagc 46720035  T

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Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 216 - 309
Target Start/End: Original strand, 8456479 - 8456571
Alignment:
Q  216 gctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||| |||||| || ||| ||||| |||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||    
T  8456479 gctaaagtgcactttttccccct-aattttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggccccctaagatttagc 8456571  T

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Target: chr3; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 8875904 - 8876000
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||| |||||||| ||  |||||  ||||||||| ||| | || |||||||||||||||||||||||||||||||||||||    
T  8875904 taggctaaagtgcacttttcaccccttaagttcgaaaaagctgcaattttagccccttatgtacaaaaactacaattttggccccctaagatttagc 8876000  T

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Target: chr3; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 309
Target Start/End: Complemental strand, 46721322 - 46721227
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||| |||| ||||||||||||| |||| |||||  || |||| ||||||||||||||||||| | |||||||||||||||    
T  46721322 aggctaaagtgcacttttctccccctaacttttaaaaagttgcgattttaaccccctatgtacaaaaactacaattttagtcccctaagatttagc 46721227  T

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Target: chr3; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 297
Target Start/End: Complemental strand, 55192096 - 55192014
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggcccc 297  Q
    ||||||||||| | |||||||||||||||||| ||||| ||||||||||||||  |||||||||||||||||||||||||||||    
T  55192096 aggctaaagtgta-ttttccccccttaactttcaaaaacttgcaattttggccctctaagtacaaaaactacaattttggcccc 55192014  T

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Target: chr3; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 213 - 307
Target Start/End: Complemental strand, 19986175 - 19986079
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttgg--cctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    ||||||||||||||||||||||| ||||| ||| ||||| ||||||||||||  ||||||| ||| |||||||||||||||| ||| ||||||||||    
T  19986175 taggctaaagtgcacttttcccctcttaagtttcaaaaacttgcaattttggcccctcctatgtataaaaactacaattttgaccctctaagattta 19986079  T

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Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 5029785 - 5029690
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||||||| | |||| ||||  |||||||||||||||||||||||| ||||| ||||||||  |||||||||| |||||    
T  5029785 taggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggcctcctaagtaccaaaaccacaatttttcccccctaagaattagc 5029690  T

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Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 47609695 - 47609791
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||| ||||||||||||||| ||||||| ||||| ||||||||||| || ||||||||| ||||| |||||||   ||||||||||||||||    
T  47609695 taggctaaaatgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagc 47609791  T

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Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 51469972 - 51470066
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||| || ||| ||| ||||| |||||||||||||| ||||||||| ||||| |||||||   ||||||||||||||||    
T  51469972 ggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttaacccccctaagatttagc 51470066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 204 - 309
Target Start/End: Complemental strand, 28263223 - 28263118
Alignment:
Q  204 attaaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaaga 303  Q
    |||| ||| ||||||||||||||||||||||||| ||||||||||||  |||| ||||||||| || | |||  ||||| ||||||||||||||||| |     
T  28263223 attatattgtaggctaaagtgcacttttccccccctaacttttaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgt 28263124  T
Q  304 tttagc 309  Q
    ||||||    
T  28263123 tttagc 28263118  T

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Target: chr3; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 218 - 309
Target Start/End: Complemental strand, 40426877 - 40426785
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgc-aattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||||||||| ||||| |||| ||||| |||| | ||  |||||||| |||||||||||||||||| ||||||||    
T  40426877 taaagtgcacttttccccccttaactttaaaaaagttgcaaatttcggccccttatatacaaaaattacaattttggccccctatgatttagc 40426785  T

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Target: chr3; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 47615651 - 47615591
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaag 273  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||    
T  47615651 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaag 47615591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 49216247 - 49216341
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||| | | ||| ||| ||||| ||||||||||| || |||| ||||||||||||||||| || |||| |||||||||||    
T  49216247 ggctaaagtgcacttttccacgcctaagtttcaaaaagttgcaattttgaccccctatgtacaaaaactacaattatgtccccttaagatttagc 49216341  T

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Target: chr3; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 51037536 - 51037629
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||| ||| |||||||| ||||| ||||||||||| ||  ||| | ||||||||||||||||| ||||||||||| |||||    
T  51037536 ggctaaagtgcacttttctccc-ttaactttcaaaaagttgcaattttgaccctctatgaacaaaaactacaattttagccccctaagaattagc 51037629  T

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Target: chr3; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 215 - 309
Target Start/End: Complemental strand, 52840705 - 52840611
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||| ||||||| ||| ||||||| ||||| |||||||||||||  ||||| ||  ||||| ||||||||| ||||||||||||||||    
T  52840705 ggctaaagtgcccttttcctcccctaactttcaaaaacttgcaattttggctccctaattatcaaaacaacaattttgtccccctaagatttagc 52840611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 23770505 - 23770416
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    ||||||||| ||||| |||||||| ||| ||||| || ||||||||| | | || ||||||||||||||||||| |||||||||||||||    
T  23770505 taaagtgcaattttctccccttaattttaaaaaagttacaattttggtcccttatgtacaaaaactacaattttagccccctaagattta 23770416  T

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Target: chr3; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 234 - 309
Target Start/End: Complemental strand, 34019227 - 34019152
Alignment:
Q  234 ccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||| ||||| ||||||||||| || |||| ||||||| ||||||||||||| ||||||| |||||||    
T  34019227 ccccttaactttcaaaaacttgcaattttgaccccctaggtacaaacactacaattttggtcccctaaaatttagc 34019152  T

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Target: chr3; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 301
Target Start/End: Complemental strand, 53901487 - 53901403
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaa 301  Q
    ||||||||||||||||||||||  ||| ||| ||||| ||||||||||| |  | ||||||||||||||||||| ||||||||||||    
T  53901487 ggctaaagtgcacttttccccc--taagtttaaaaaagttgcaattttgactccttaagtacaaaaactacaatgttggccccctaa 53901403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 309
Target Start/End: Complemental strand, 535883 - 535789
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||| |||||||| ||| ||||||| ||||| |||||||||||| | | ||||||  ||||||| ||||||  ||||||||||||||||    
T  535883 ggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggtcccttaagtattaaaactataattttcaccccctaagatttagc 535789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 290
Target Start/End: Original strand, 5001197 - 5001275
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattt 290  Q
    |||||||||||||||||||||| ||| || |||| ||||  |||||||||||||| ||||||||| ||||| |||||||    
T  5001197 ataggctaaagtgcacttttcctcccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 5001275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 309
Target Start/End: Original strand, 28262189 - 28262286
Alignment:
Q  211 tataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||||||| ||||||| ||||  |||| ||||||||| || | |||  ||||| ||||||||||||||||| | ||||||    
T  28262189 tataggctaaagtgcacttttcccccc-taactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagc 28262286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 212 - 309
Target Start/End: Original strand, 52276301 - 52276398
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||||||| || |||| ||||  |||| ||||||||| || | |||  ||||| ||||||||||||||||| | ||||||    
T  52276301 ataggctaaagtgcacttttccccccctatctttcaaaacgttgcgattttggccccccatgtatgaaaacaacaattttggccccctatgttttagc 52276398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 51470557 - 51470462
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||| ||||||||| |||||| ||||| ||||||||| |  | ||||||||| ||||| ||||||| |  |||||||||||||||    
T  51470557 taggctaaagtgcactcttcccccct-aactttcaaaaacttgcaatttagatcccctaagtaccaaaaccacaatttagcacccctaagatttagc 51470462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 52281650 - 52281554
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||||| || |||| ||||  |||| ||||||||| || | |||  ||||| ||||||||||||||||| | ||||||    
T  52281650 taggctaaagtgcacttttccccccctatctttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagc 52281554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 298
Target Start/End: Original strand, 53614810 - 53614902
Alignment:
Q  206 taaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccc 298  Q
    |||||| |||||||||||||| |||||| ||||||||||| ||||| || ||||||| | |  |||  || ||||||||||||||||||||||    
T  53614810 taaattttaggctaaagtgcatttttcctcccttaactttcaaaaacttacaattttagtcctctatatataaaaactacaattttggccccc 53614902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 309
Target Start/End: Original strand, 18442622 - 18442725
Alignment:
Q  207 aaattataggctaaagtgcacttttcccccct-taacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatt 305  Q
    |||||| ||||||||||||||||| ||||||  ||||||| ||||  |||| ||||||||| || | |||  ||||||||||||||||||||||| | ||    
T  18442622 aaattaaaggctaaagtgcactttccccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaactacaattttggccccctatgttt 18442721  T
Q  306 tagc 309  Q
    ||||    
T  18442722 tagc 18442725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 309
Target Start/End: Original strand, 19487696 - 19487799
Alignment:
Q  207 aaattataggctaaagtgcacttttcccccct-taacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatt 305  Q
    |||||| ||||||||||||||||| ||||||  ||||||| ||||  |||| ||||||||| || | |||  ||||||||||||||||||||||| | ||    
T  19487696 aaattaaaggctaaagtgcactttccccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaactacaattttggccccctatgttt 19487795  T
Q  306 tagc 309  Q
    ||||    
T  19487796 tagc 19487799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 51347265 - 51347360
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    ||||| ||||||||||||| |||| ||||| ||| ||||| |||||||||||| |  ||| | |||||||  ||||||||| ||||||||||||||    
T  51347265 ataggttaaagtgcactttccccctcttaagtttgaaaaagttgcaattttggtcctctatgaacaaaaatgacaattttgaccccctaagattta 51347360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 52104484 - 52104569
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    |||| ||||||||||||||  ||||||| ||||| ||| ||||||||  ||||| |||||||||||| |||||||||| |||||||||||    
T  52104484 taaaatgcacttttccccc--taactttcaaaaagttgtaattttgg--tcctatgtacaaaaactataattttggccacctaagattta 52104569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 307
Target Start/End: Complemental strand, 11671443 - 11671350
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    ||||||||||||||||||| || || ||||||| ||||| |||||||||| ||| ||||| || ||||||||||  |||| ||||||| ||||||    
T  11671443 taggctaaagtgcactttttccgcc-taactttcaaaaacttgcaattttagccccctaaatataaaaactacagatttgaccccctatgattta 11671350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 54987119 - 54987014
Alignment:
Q  202 ttattaaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaa 301  Q
    ||||||||||  ||| |||||||||||||||||||  ||| ||| ||||| |||| ||||| | | |||| ||| |||||||| ||||||| ||| ||||    
T  54987119 ttattaaatttaaggttaaagtgcacttttccccc--taagtttcaaaaagttgcgattttagtcccctatgtataaaaactataattttgaccctctaa 54987022  T
Q  302 gatttagc 309  Q
    ||||||||    
T  54987021 gatttagc 54987014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 309
Target Start/End: Complemental strand, 18456165 - 18456070
Alignment:
Q  215 ggctaaagtgcacttttcccccct-taacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||||  ||||||| ||||  |||| ||||||||| || | |||  ||||| ||||||||||||||||| | ||||||    
T  18456165 ggctaaagtgcacttttcccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagc 18456070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 309
Target Start/End: Original strand, 31645000 - 31645067
Alignment:
Q  242 cttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||| ||||| || ||||||||||| ||||||| ||||||||||||||||  || |||||||||||||    
T  31645000 ctttcaaaaacttacaattttggccccctaagtgcaaaaactacaattttaacctcctaagatttagc 31645067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 309
Target Start/End: Original strand, 52839036 - 52839131
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||| |||||||||  ||||||  ||||||||| ||||||| ||  |||||||| ||||| ||||||||  ||| |||| |||||||    
T  52839036 aggctaaagtgcaattttccccctctaacttccaaaaatttgtaattttgaccctctaagtaccaaaacaacaattttacccctctaaaatttagc 52839131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 306
Target Start/End: Original strand, 23769855 - 23769947
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattt 306  Q
    |||||| |||||||||||||| ||||||||||| || || ||||||||||   |  ||| || |||||||||||||||| | ||||||||||||    
T  23769855 taggctgaagtgcacttttccacccttaactttcaacaagttgcaattttaatcctctatgtgcaaaaactacaatttt-gacccctaagattt 23769947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 308
Target Start/End: Original strand, 11670397 - 11670477
Alignment:
Q  228 ttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttag 308  Q
    |||| ||| ||||| ||| |||||||||||||||| | | |||||||| |||||||| |||||||| ||| || |||||||    
T  11670397 tttttcccgcttaattttcaaaaatttgcaattttagtcccctaagtataaaaactataattttggtcccttatgatttag 11670477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 307
Target Start/End: Complemental strand, 6250672 - 6250585
Alignment:
Q  220 aagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    ||||||||||| ||||  |||| ||||||||| |||  ||||||| | |||| |||||||| ||| |||||| |||| ||||||||||    
T  6250672 aagtgcactttcccccttttaagttttaaaaaattgtgattttggtcccctatgtacaaaacctaaaattttagccctctaagattta 6250585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 251
Target Start/End: Complemental strand, 31039296 - 31039257
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaa 251  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  31039296 ataggctaaagtgcacttttcaccccttaagttttaaaaa 31039257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 309
Target Start/End: Original strand, 49398130 - 49398220
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||| |||| ||||||||| ||   |||||||  | ||| | ||||||| ||||||||||||| | |||||||||||    
T  49398130 taaagtgcacttttccccc-ttaagttttaaaaaattattattttggtgttctatgaacaaaaattacaattttggcctcttaagatttagc 49398220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 309
Target Start/End: Complemental strand, 53616114 - 53616023
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||| ||||||||||||||| | ||| ||||||     | || ||||||||||||||||||  |||||| |||| |||||    
T  53616114 taaagtgcacttttcctcccttaacttttaaacacttgtaattttaattccttatgtacaaaaactacaatttcagccccccaagaattagc 53616023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 25336358 - 25336411
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctc 268  Q
    ||||||| |||||||||| |||||||| ||| ||||  ||||||||||||||||    
T  25336358 ggctaaactgcacttttcgccccttaaatttcaaaatgttgcaattttggcctc 25336411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 50296201 - 50296262
Alignment:
Q  210 ttataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctccta 271  Q
    |||||||||||| |||||||||  |||||||| |||  |||| |||||||||||||| ||||    
T  50296201 ttataggctaaaatgcactttttgccccttaagtttgcaaaagttgcaattttggcccccta 50296262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 6171314 - 6171251
Alignment:
Q  243 ttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    ||||||||| |||  ||||||||| |||| |||||||||||| ||||||| ||| ||||||||||    
T  6171314 ttttaaaaaattgtgattttggcc-cctatgtacaaaaactataattttgaccctctaagattta 6171251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 22775783 - 22775826
Alignment:
Q  222 gtgcacttttccccccttaacttttaaaaatttgcaattttggcc 266  Q
    ||||||||||||||||| |||||| ||||| ||||||||||||||    
T  22775783 gtgcacttttcccccct-aactttcaaaaagttgcaattttggcc 22775826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 39843054 - 39843098
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaatttt 262  Q
    |||||||||||||| ||||||||| ||| ||||| ||||||||||    
T  39843054 taaagtgcactttttcccccttaagtttgaaaaagttgcaatttt 39843098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 213 - 303
Target Start/End: Original strand, 17468 - 17558
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaaga 303  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  17468 taggctaaagtgcactttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccccaaga 17558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 215 - 309
Target Start/End: Complemental strand, 18877 - 18783
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||| ||| | |||||||||||||||||||||||||| | |||| |||||||||||| |||||||||||| ||| |||||||    
T  18877 ggctaaagtgcactttttccctcctaacttttaaaaatttgcaattttggtcccctaggtacaaaaactataattttggccccttaaaatttagc 18783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 4e-32; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 18371424 - 18371518
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||| | ||||||| ||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  18371424 ggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttggccccctaagatttagc 18371518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 207 - 309
Target Start/End: Complemental strand, 17782662 - 17782560
Alignment:
Q  207 aaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattt 306  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||| |||||||||||||| ||||||||| ||||| ||||||| | |||||||||||||    
T  17782662 aaattataggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagattt 17782563  T
Q  307 agc 309  Q
    |||    
T  17782562 agc 17782560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 212 - 309
Target Start/End: Original strand, 22629480 - 22629580
Alignment:
Q  212 ataggctaaagtgcacttttccccc---cttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttag 308  Q
    ||||||||||||||| |||||||||   ||||| ||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22629480 ataggctaaagtgcatttttccccctcccttaattttcaaaaacttgtaattttggcctcctaagtacaaaaactacaattttggccccctaagatttag 22629579  T
Q  309 c 309  Q
    |    
T  22629580 c 22629580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 22630555 - 22630463
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatt 305  Q
    |||||||||||||||||||||| || ||||||| ||||| |||||||||||||| ||||| |||||||||||||||||| |||||||||||||    
T  22630555 taggctaaagtgcacttttccctccataactttcaaaaacttgcaattttggccccctaattacaaaaactacaattttagccccctaagatt 22630463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 31659622 - 31659717
Alignment:
Q  215 ggctaaagtgcactttt-ccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||| |||||| ||||||| ||||| || |||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  31659622 ggctaaagtgcacttttaccccccctaactttcaaaaacttacaattttgaccccctaagtacaaaaactacaattttggccccctaagatttagc 31659717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 3227697 - 3227601
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||||| ||||||| ||||| |||||||||||||| ||||||||| ||||| ||||||| |  |||||||||||||||    
T  3227697 taggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcacccctaagatttagc 3227601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 42886389 - 42886293
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||| ||||||||||||||| || | ||||||| ||||||||||||||||| || ||||| |||||||||||||||||| |||||||||||||||||    
T  42886389 taggttaaagtgcacttttctcctcctaactttcaaaaatttgcaattttgaccccctaaatacaaaaactacaattttagccccctaagatttagc 42886293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 228 - 309
Target Start/End: Complemental strand, 18372544 - 18372464
Alignment:
Q  228 ttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||| || ||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18372544 ttttcccccct-aattttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctaagatttagc 18372464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 204 - 309
Target Start/End: Complemental strand, 31949914 - 31949809
Alignment:
Q  204 attaaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaaga 303  Q
    ||||||| ||||||||||||||||| |||||||| ||||||| ||||| |||||||||||||| ||||| ||| ||||| ||||||| |  |||||||||    
T  31949914 attaaataataggctaaagtgcactcttccccccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaatttagcacccctaaga 31949815  T
Q  304 tttagc 309  Q
    ||||||    
T  31949814 tttagc 31949809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 7501955 - 7501859
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||||  ||||||| ||||| |||||||||||||| ||||||||  ||||| |||||||||||||| |||||| ||||    
T  7501955 taggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccttaagatgtagc 7501859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 31949320 - 31949416
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||| || ||| ||| ||||| |||||||||||||| ||||||||| ||||| ||||||| | ||||||||||||||||    
T  31949320 taggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagc 31949416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 293
Target Start/End: Original strand, 11658367 - 11658457
Alignment:
Q  202 ttattaaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttgg 293  Q
    ||||||||| |||||||||| ||||||||||||||||||||||| |||||  ||||||||| ||| |||| |||||||||||||||||||||    
T  11658367 ttattaaat-ataggctaaattgcacttttccccccttaactttcaaaaacatgcaattttagccccctatgtacaaaaactacaattttgg 11658457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 127335 - 127429
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||||||| |||||| ||||| |||||||||||| | ||||||||| ||||| |||| ||| |||||||||||||||||    
T  127335 taggctaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggtcccctaagtaccaaaaccacaa-tttagccccctaagatttagc 127429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 217 - 309
Target Start/End: Original strand, 17781663 - 17781755
Alignment:
Q  217 ctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||| ||||||| ||||| ||||||||||| || ||||||||| ||||| |||||||   ||||||||||||||||    
T  17781663 ctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagc 17781755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 305
Target Start/End: Complemental strand, 128699 - 128612
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatt 305  Q
    ||||||||||||||||| || ||||||| ||||||||||||||||| || ||||||||| ||||| ||||||| | ||||||||||||    
T  128699 taaagtgcacttttcccaccataactttcaaaaatttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatt 128612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 309
Target Start/End: Original strand, 7500454 - 7500548
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||| ||||||||| ||||| |||||||||||  |  ||||||| | |||| ||||||||||||||||||||||||||    
T  7500454 aggctaaagtgcacttttcccc-cttaactttcaaaaacttgcaattttgatcctctaagtatagaaaccacaattttggccccctaagatttagc 7500548  T

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Target: chr7; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 309
Target Start/End: Original strand, 47369780 - 47369875
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||| |||||||||   ||| ||||||| ||||| |||||||||| ||||| ||||||||||||||| |||||||||||| |||||||||||    
T  47369780 aggctaaaatgcactttttttcccctaactttcaaaaacttgcaattttagcctcataagtacaaaaactataattttggccccttaagatttagc 47369875  T

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Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 220 - 309
Target Start/End: Complemental strand, 14999249 - 14999162
Alignment:
Q  220 aagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||| |  |||| |||| ||||||||||| || ||||| ||||||||||||||||||||| ||||||||||||||    
T  14999249 aagtgcacttttcccccctaa--ttttcaaaacttgcaattttgaccccctaaatacaaaaactacaattttggcgccctaagatttagc 14999162  T

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Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 309
Target Start/End: Original strand, 21505413 - 21505508
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||||||  ||||||| ||||| |||| ||||||||| || |  ||||||||||||||||||| |||| |||||||||||    
T  21505413 ataggctaaagtgcacttttccccc--taactttcaaaaagttgcgattttggcccccgatatacaaaaactacaattttgaccccataagatttagc 21505508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 309
Target Start/End: Complemental strand, 47525468 - 47525374
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||  ||||||| ||||| |||||||||| ||| ||||||||  ||||| ||||||| | ||||||||||||||||    
T  47525468 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttagccccctaagtatcaaaaccacaatttagcccccctaagatttagc 47525374  T

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Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 309
Target Start/End: Complemental strand, 11662649 - 11662558
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||| ||   ||| |||||||||||| ||||||||||||| |||| |||||    
T  11662649 taaagtgcatttttccccccttaactttcaaaaacttgcaattttagctctctatgtacaaaaactataattttggccccccaagaattagc 11662558  T

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Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 309
Target Start/End: Original strand, 3227109 - 3227201
Alignment:
Q  216 gctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||| ||||||| || ||| ||||| |||||||||||||| ||||||||| ||||| ||||||| | |||| |||||||||||    
T  3227109 gctaaagtgcactttccccccct-aattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccttaagatttagc 3227201  T

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Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 20163658 - 20163585
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaa 287  Q
    |||||||||||||||| ||| ||| ||||||| ||||| |||||||||||||  |||| |||||||||||||||    
T  20163658 aggctaaagtgcacttctccacccctaactttcaaaaacttgcaattttggctccctatgtacaaaaactacaa 20163585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 30439460 - 30439365
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||| | |||||||||||| ||||| || | ||||||   ||||| || |||||||||||||||| | |||||||||||||||    
T  30439460 taggctaaagtgcacttt-ctccccttaactttcaaaaagttacgattttgatttcctatgttcaaaaactacaattttagtcccctaagatttagc 30439365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 289
Target Start/End: Complemental strand, 34174085 - 34174010
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaatt 289  Q
    ||||||||||||||||||||||||| || |||| ||||  |||||||||||||| ||||||||| ||||| ||||||    
T  34174085 taggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatt 34174010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 289
Target Start/End: Original strand, 47524532 - 47524599
Alignment:
Q  222 gtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaatt 289  Q
    |||||||||||||||  ||||||| ||||| |||||||||||||| ||||||||| ||||| ||||||    
T  47524532 gtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatt 47524599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 215 - 309
Target Start/End: Complemental strand, 48935004 - 48934910
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||| |||||| ||| ||||||| ||||| ||| ||||||| ||  |||||||||||||||| |||||||  |||| |||| |||||    
T  48935004 ggctaaagtgcatttttccacccctaactttcaaaaacttgtaattttgaccctctaagtacaaaaactaaaattttgatcccccaagaattagc 48934910  T

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Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 307
Target Start/End: Complemental strand, 31661111 - 31661018
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    ||||||||||||||||| ||| |  ||||||| ||||||||||||||||| ||   || |||||||||||| |||||| | ||||||| |||||    
T  31661111 aggctaaagtgcactttcccctctctaactttcaaaaatttgcaattttgaccctttacgtacaaaaactataattttagtcccctaaaattta 31661018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 769413 - 769497
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccct 299  Q
    |||||||||||| |||||| ||  ||| ||| ||||| ||||||||||| | ||||||||||||||| || ||||||||| ||||    
T  769413 ggctaaagtgcaattttccacctgtaattttcaaaaacttgcaattttgacatcctaagtacaaaaattataattttggctccct 769497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 307
Target Start/End: Complemental strand, 34352888 - 34352795
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    |||||||||||||||||| | ||  ||| ||| ||||| || | ||||||| | | |||||||| |||||| ||||||||||| ||||||||||    
T  34352888 aggctaaagtgcactttttcacctctaattttcaaaaactttctattttggtcccttaagtacataaactataattttggccctctaagattta 34352795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 5111441 - 5111497
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcct 270  Q
    ||||||||||||||||||| |||||||| ||| ||||| |||  |||||||||||||    
T  5111441 aggctaaagtgcacttttcaccccttaagtttcaaaaacttgtgattttggcctcct 5111497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 46482594 - 46482689
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    |||| |||||||||| ||||| || | ||| ||| ||||||||| || |||| || |||| |||||||||||| ||||||   |||||||||||||    
T  46482594 atagactaaagtgcatttttctcctcctaattttcaaaaatttgtaaatttgaccccctatgtacaaaaactataattttaatcccctaagattta 46482689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 9822371 - 9822334
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaa 251  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  9822371 aggctaaagtgcacttttcaccccttaagttttaaaaa 9822334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 10724296 - 10724259
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaa 251  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  10724296 aggctaaagtgcacttttcaccccttaagttttaaaaa 10724259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 264
Target Start/End: Original strand, 15681587 - 15681644
Alignment:
Q  207 aaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttgg 264  Q
    |||||| ||||||||||| ||||||| ||| |||| ||||||||| |||| |||||||    
T  15681587 aaattaaaggctaaagtgaacttttcacccattaagttttaaaaagttgcgattttgg 15681644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 42271637 - 42271552
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccct 299  Q
    ||||||||||||||||||| |||| ||  ||||||||  |||||||||| ||| ||||   | |||||  ||||||||||||||||    
T  42271637 aggctaaagtgcacttttcgccccctatgttttaaaatgttgcaatttttgccccctattaaaaaaaatgacaattttggccccct 42271552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 250
Target Start/End: Complemental strand, 21810153 - 21810109
Alignment:
Q  206 taaattataggctaaagtgcacttttccccccttaacttttaaaa 250  Q
    ||||| ||||||||||||||||||||| |||| ||| ||||||||    
T  21810153 taaatcataggctaaagtgcacttttcgccccctaagttttaaaa 21810109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 32253501 - 32253441
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaag 273  Q
    ||||||||||| ||||||||| ||||||| ||  ||||| ||||||||||| || ||||||    
T  32253501 taggctaaagtacacttttccacccttaagttgcaaaaagttgcaattttgaccacctaag 32253441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 9e-30; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 212 - 309
Target Start/End: Original strand, 10784589 - 10784687
Alignment:
Q  212 ataggctaaagtgcacttttccc-cccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||  || |||||||| |||||||||||||||||||||| ||||||||||    
T  10784589 ataggctaaagtgcacttttccctcccttaacttttaaaaacttgcaattttaaccccctaagtataaaaactacaattttggcccccaaagatttagc 10784687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 218 - 309
Target Start/End: Complemental strand, 1829701 - 1829610
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||  |||| ||||||||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||||||||    
T  1829701 taaagtgcacttttttccccctaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttggccccctaagatttagc 1829610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 212 - 309
Target Start/End: Complemental strand, 7316398 - 7316301
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| ||   |||| |||||||||||||| |||||||||||    
T  7316398 ataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaaatattgaaaccacaattttggccccttaagatttagc 7316301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 212 - 309
Target Start/End: Original strand, 27437825 - 27437922
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||| |||||||||||| ||||| |||||||||||||| ||||   | |||||||||||||||| ||||||||||||||||    
T  27437825 ataggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgaccccctaagatttagc 27437922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 8659263 - 8659359
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||||  ||||||| ||||| |||||||||||||| ||||||||| ||||| ||||||| | ||||||||||||||||    
T  8659263 taggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagc 8659359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 8821871 - 8821967
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||||  ||||||| ||||| |||||||||||||| ||||||||| ||||| ||||||| | ||||||||||||||||    
T  8821871 taggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagc 8821967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 16704600 - 16704504
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||||||||||| || |||||||||||||||||||||||||  ||  |||||||||||    
T  16704600 taggctaaagtgcacttttcctcccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgatcctttaagatttagc 16704504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 206 - 309
Target Start/End: Complemental strand, 8822903 - 8822800
Alignment:
Q  206 taaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatt 305  Q
    |||||||| |||||||||||||||||||| | |||||||| ||||| ||||||||||| || ||||||||| ||||| ||||||| | ||||||||||||    
T  8822903 taaattattggctaaagtgcacttttccctctttaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatt 8822804  T
Q  306 tagc 309  Q
    ||||    
T  8822803 tagc 8822800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 213 - 308
Target Start/End: Original strand, 14822358 - 14822453
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttag 308  Q
    ||||||| |||||||||||| |||||||| ||| ||||| |||||||||||||| | |||||| | ||||||||||||||||||||||||||||||    
T  14822358 taggctagagtgcacttttcaccccttaattttcaaaaacttgcaattttggccccataagtatagaaactacaattttggccccctaagatttag 14822453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 14823680 - 14823583
Alignment:
Q  212 ataggctaaagtgcacttttc-cccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttag 308  Q
    ||||||||||||||||||||  ||||||||| ||| ||||| |||||||||| ||| | |||||||| ||||||||||||||||||||||||||||||    
T  14823680 ataggctaaagtgcacttttttcccccttaattttaaaaaacttgcaattttagccccttaagtacagaaactacaattttggccccctaagatttag 14823583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 7314880 - 7314973
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||  ||||||| ||||| |||||||||||||| ||||||||  ||||| ||||||||| ||||||||||||||||    
T  7314880 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcc-cctaagtatcaaaacaacaattttgaccccctaagatttagc 7314973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 309
Target Start/End: Complemental strand, 8660305 - 8660211
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||| | ||||||| ||||| ||||||||||| || ||||||||| ||||| ||||||| | ||||||||||||||||    
T  8660305 aggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttgacc-cctaagtaccaaaaccacaatttagcccccctaagatttagc 8660211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 210 - 309
Target Start/End: Complemental strand, 27322173 - 27322075
Alignment:
Q  210 ttataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||||||||| | |||| ||||  |||||||||||||| ||||||||| ||||| ||||||||  |||||||||| |||||    
T  27322173 ttataggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttccccccctaagaattagc 27322075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 210 - 309
Target Start/End: Complemental strand, 34834685 - 34834586
Alignment:
Q  210 ttataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||| ||||||||||||||||| || ||||||| ||||| |||||||||||  ||||||||||  ||||| ||||||| | ||||||||||||||||    
T  34834685 ttataggttaaagtgcacttttccctccctaactttcaaaaacttgcaattttgatctcctaagtatcaaaaccacaatttagcccccctaagatttagc 34834586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 228 - 309
Target Start/End: Complemental strand, 10786000 - 10785920
Alignment:
Q  228 ttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||| |||||||||||||||||||||||  || ||||||||||||||||||||||||  |||| |||||||||||    
T  10786000 ttttcccccct-aacttttaaaaatttgcaattttaaccccctaagtacaaaaactacaattttaaccccttaagatttagc 10785920  T

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Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 309
Target Start/End: Original strand, 3721611 - 3721706
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||||  ||||||| ||||| ||||||||||| || ||||||||| ||||| | ||||| | |||| |||||||||||    
T  3721611 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccataatttagaccccttaagatttagc 3721706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 291
Target Start/End: Complemental strand, 6842386 - 6842308
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaatttt 291  Q
    ||||||||||||||||||||||||  ||| ||| ||||| |||||||||||||| |||| || ||||||||||||||||    
T  6842386 taggctaaagtgcacttttccccctctaagtttcaaaaagttgcaattttggccccctatgtgcaaaaactacaatttt 6842308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 307
Target Start/End: Complemental strand, 26575131 - 26575063
Alignment:
Q  239 taacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    ||||||| ||||| ||||||||||  || | ||||||||||||||||||||||||||||||||||||||    
T  26575131 taactttcaaaaacttgcaattttaaccccttaagtacaaaaactacaattttggccccctaagattta 26575063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 266
Target Start/End: Complemental strand, 27448017 - 27447963
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcc 266  Q
    |||||||||||||||||||||||||||||| ||||||||| || |||||||||||    
T  27448017 ataggctaaagtgcacttttccccccttaagttttaaaaagttacaattttggcc 27447963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 213 - 290
Target Start/End: Complemental strand, 3722610 - 3722533
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattt 290  Q
    |||||||||||||||||||||| || ||||||| ||||| ||||||||||| ||  |||||||| ||||| |||||||    
T  3722610 taggctaaagtgcacttttccctccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaattt 3722533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 296
Target Start/End: Original strand, 29473082 - 29473158
Alignment:
Q  220 aagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccc 296  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||   |||| | |||||||  |||||||||||||    
T  29473082 aagtgcacttttccccccttaagttttaaaaagttgcaattttggttccctatgaacaaaaataacaattttggccc 29473158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 297
Target Start/End: Original strand, 1828738 - 1828821
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggcccc 297  Q
    ||||||||||||| |||| |||| |||| ||||||||||||||||||||||| |  ||||| |||||| || ||||||| ||||    
T  1828738 aggctaaagtgcattttttcccctttaatttttaaaaatttgcaattttggctttttaagttcaaaaattataattttgtcccc 1828821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 309
Target Start/End: Complemental strand, 3333128 - 3333033
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||| |||||||||||||   ||| ||| ||||| |||| ||||||||| |||| |||||||||||||||||||  ||| |||| |||||||    
T  3333128 aggctaaattgcacttttccccttctaagtttgaaaaagttgcgattttggccccctatgtacaaaaactacaattttaaccctctaaaatttagc 3333033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 309
Target Start/End: Original strand, 5658759 - 5658850
Alignment:
Q  218 taaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||| |||||||||||||| ||||||||| ||  |||||| |   |||| ||||||||||||||||||||  ||| |||||||||||    
T  5658759 taaagtgcatttttccccccttaagttttaaaaagttataattttagttccctatgtacaaaaactacaattttgatcccttaagatttagc 5658850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 307
Target Start/End: Original strand, 6840192 - 6840284
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    |||||| |||||||||||  ||||||||| ||| ||||| |||| ||||||||| | ||| ||||||||||| ||||||| ||| ||||||||||    
T  6840192 taggctgaagtgcacttt--cccccttaagtttcaaaaagttgcgattttggccccttaaatacaaaaactataattttgaccctctaagattta 6840284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 307
Target Start/End: Complemental strand, 12382811 - 12382720
Alignment:
Q  216 gctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    |||||||||||||||||| ||  ||| ||||||||||||| ||||||| || ||||||||  ||||||| |||||||  |||| ||||||||    
T  12382811 gctaaagtgcacttttccacctctaatttttaaaaatttgtaattttgaccccctaagtattaaaactataattttgatccccaaagattta 12382720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 307
Target Start/End: Original strand, 16703570 - 16703659
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    ||||||||||||||||||||||  || |||| ||||| |||||||||||  | | ||| |||||||||||||||||| ||||||||| |||||    
T  16703570 ggctaaagtgcacttttccccc--tatctttcaaaaacttgcaattttgatc-cataaatacaaaaactacaattttagccccctaaaattta 16703659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 34830927 - 34830996
Alignment:
Q  240 aacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||| |||||||||||  ||||||| ||||||||| ||||| ||||||| | ||||||||||||||||    
T  34830927 aactttcaaaaatttgcatatttggccccctaagtaccaaaaccacaatttagcccccctaagatttagc 34830996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 16415636 - 16415586
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttg 263  Q
    |||||||||||||||||||| |||||||| ||||||||| |||| ||||||    
T  16415636 taggctaaagtgcacttttcaccccttaaattttaaaaagttgcgattttg 16415586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 307
Target Start/End: Original strand, 17496791 - 17496890
Alignment:
Q  213 taggctaaagtgcacttttccccc----cttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttgg-ccccctaagattta 307  Q
    |||||||||||||| |||||||||    | ||||||| ||||| || |||||||  ||  ||||||||||||||| ||||||||| ||||||||||||||    
T  17496791 taggctaaagtgcatttttccccctccccctaactttcaaaaacttacaattttaaccctctaagtacaaaaactgcaattttggcccccctaagattta 17496890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 290
Target Start/End: Original strand, 27318312 - 27318389
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattt 290  Q
    |||||||||||||||| ||| |||||| | |||| ||||  |||||||||||||| ||||||||| ||||| |||||||    
T  27318312 ataggctaaagtgcaccttttccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 27318389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 309
Target Start/End: Complemental strand, 30495806 - 30495704
Alignment:
Q  206 taaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggcccc-ctaagat 304  Q
    |||||| | ||||||||||||||||| ||||  ||||||| ||||| |||| |||||   | |||| |||||||||  |||||||||||||| |||||||    
T  30495806 taaatttttggctaaagtgcactttttcccc--taactttcaaaaagttgcgattttaatcccctatgtacaaaaataacaattttggcccctctaagat 30495709  T
Q  305 ttagc 309  Q
    |||||    
T  30495708 ttagc 30495704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 26574617 - 26574712
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||| ||| || ||  ||||||| ||||| |||||||||||  |  ||||||||||||||||| ||||||  ||| |||||||||||    
T  26574617 taggctaaagtgcaatttcccacctctaactttcaaaaacttgcaattttgaacctctaagtacaaaaactac-attttgatcccttaagatttagc 26574712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 271
Target Start/End: Original strand, 18749094 - 18749153
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctccta 271  Q
    |||||||||| |||||||||| |||||||  ||||||||  |||||||||||||| ||||    
T  18749094 ataggctaaactgcacttttcgccccttatgttttaaaatgttgcaattttggcccccta 18749153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 26717183 - 26717137
Alignment:
Q  217 ctaaagtgcacttttccccccttaacttttaaaaatttgcaattttg 263  Q
    ||||||||||||||||||||||||| ||| | ||| |||||||||||    
T  26717183 ctaaagtgcacttttccccccttaagtttcagaaacttgcaattttg 26717137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 12350823 - 12350891
Alignment:
Q  240 aacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||| | ||| ||||||||||| || |||| ||| |||||||||||||||  ||||||||||||||||    
T  12350823 aactttaataaacttgcaattttgacc-cctatgtataaaaactacaattttaaccccctaagatttagc 12350891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 34834229 - 34834172
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctccta 271  Q
    ||||||||||||||||||| |||||||  ||||||||  |||| |||||| |||||||    
T  34834229 aggctaaagtgcacttttcgccccttatgttttaaaatattgcgattttgacctccta 34834172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 216 - 309
Target Start/End: Complemental strand, 61559 - 61466
Alignment:
Q  216 gctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||| ||||||| ||| ||||| |||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||    
T  61559 gctaaagtgcacttttcctcccttaattttcaaaaacttgcaattttagccccctaagtacaaaaactataattttggccccctatgatttagc 61466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 60090 - 60184
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||| ||  ||||||||||||| ||||||||||| || |||| ||| |||||||||||||||| ||||||| ||||||||    
T  60090 ggctaaagtgcacttttcctcctctaacttttaaaaacttgcaattttgaccccctatgtataaaaactacaattttgaccccctatgatttagc 60184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 212 - 309
Target Start/End: Complemental strand, 49537 - 49440
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||| |||||||||||| ||||| |||||||||||||| ||||   | |||||||||||||||| ||||||||||||||||    
T  49537 ataggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgaccccctaagatttagc 49440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 266
Target Start/End: Original strand, 39341 - 39395
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcc 266  Q
    |||||||||||||||||||||||||||||| ||||||||| || |||||||||||    
T  39341 ataggctaaagtgcacttttccccccttaagttttaaaaagttacaattttggcc 39395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 5541 - 5445
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||||| ||| ||| ||||| ||||||||||| || | ||||||||||||||||||||||| |||| |||||||||||    
T  5541 taggctaaagtgcacttttccccccctaattttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttgcccccttaagatttagc 5445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 4440 - 4536
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||| ||| ||||| ||| ||| ||||| || ||||||| ||| | |||||||||||| |||||||||  |||||||| |||||||    
T  4440 taggctaaagtgcacattttcccccctaattttcaaaaacttacaattttagccccttaagtacaaaaattacaattttacccccctaaaatttagc 4536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 233 - 327
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||| |||||||||||||| ||||| |||||||||||| | |||| |||||||||||| |||||||| ||||||||| |||||    
T  233 ggctaaagtgcactttcccccccttaactttcaaaaagttgcaattttggtcccctatgtacaaaaactataattttggtcccctaagaattagc 327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 1058 - 985
Alignment:
Q  236 ccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||| |||||||||||| | | || |||||||||||| ||||||||||||| |||| |||||    
T  1058 ccttaacttttaaaaagttgcaattttggtcccttatgtacaaaaactataattttggccccccaagaattagc 985  T

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Target: scaffold0320 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 213 - 307
Target Start/End: Original strand, 19486 - 19580
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    |||||||||||||| |||||||||||||| ||| ||||  |||||||||||||| |||||||| ||||||||||||||||  |||||||||||||    
T  19486 taggctaaagtgcatttttccccccttaattttcaaaaccttgcaattttggccccctaagtataaaaactacaattttgatcccctaagattta 19580  T

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Target: scaffold0112 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 37148 - 37241
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaa-atttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||  || ||||||||| ||||||||||||| || ||||||||||||||| ||||||||||||||||| ||||||||    
T  37148 ggctaaagtgcacttttccccc--tatcttttaaaaaatttgcaattttgaccccctaagtacaaaaacaacaattttggccccctacgatttagc 37241  T

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Target: scaffold0045 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 215 - 291
Target Start/End: Complemental strand, 49185 - 49109
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaatttt 291  Q
    ||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||    
T  49185 ggctaaattgcacttttccacccttaacttttaaaaacttgcaattttggcctcctaagtattaaaactacaatttt 49109  T

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Target: scaffold1303 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 212 - 309
Target Start/End: Original strand, 1436 - 1533
Alignment:
Q  212 ataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||| |||||||||||  ||||||| ||||| ||||||||||| || |||| ||| |||||||| ||||||| ||||||||||||||||    
T  1436 ataggctaaagtgtacttttccccctctaactttaaaaaacttgcaattttgaccccctatgtataaaaactataattttgaccccctaagatttagc 1533  T

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Target: scaffold0632 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 3410 - 3315
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||||||||| |||| ||||| || |||||||| || | || |||||||||||| |||||||| |||||||||||||||    
T  3410 taggctaaagtgcacttttcccccctta-ctttcaaaaacttacaattttgaccccataggtacaaaaactataattttggtcccctaagatttagc 3315  T

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Target: scaffold0586 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 6341 - 6437
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||| |||||||||||||||| ||||||| ||| ||||| || | ||||| ||| |||| |||||||||||||||||||| ||||||||||||||||    
T  6341 taggttaaagtgcacttttccgcccttaagtttcaaaaagttacgattttagccccctatgtacaaaaactacaattttgaccccctaagatttagc 6437  T

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Target: scaffold0586; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 206 - 309
Target Start/End: Complemental strand, 9135 - 9034
Alignment:
Q  206 taaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatt 305  Q
    ||||| |||||||||||||||||||| || |||||| ||| ||||| |||  ||||| |||||||| ||||||||||||||||||||| |||||||||||    
T  9135 taaataataggctaaagtgcactttttcctccttaa-tttcaaaaagttgtgatttttgcctcctatgtacaaaaactacaattttgg-cccctaagatt 9038  T
Q  306 tagc 309  Q
    ||||    
T  9037 tagc 9034  T

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Target: scaffold0321 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 217 - 303
Target Start/End: Original strand, 18730 - 18816
Alignment:
Q  217 ctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaaga 303  Q
    ||||||||||||||| ||| ||||||||||||||| |||| |||||| ||||||| | |||||||||||||||||| || |||||||    
T  18730 ctaaagtgcactttttccctcttaacttttaaaaagttgcgattttgacctcctatgaacaaaaactacaattttgacctcctaaga 18816  T

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Target: scaffold0093 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 309
Target Start/End: Complemental strand, 2564 - 2472
Alignment:
Q  216 gctaaagtgcacttttccccccttaacttttaaaaat-ttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||  ||||||| |||||  ||||||||||| || ||||||||||||||| || |||||||||||||| ||||||||    
T  2564 gctaaagtgcacttttccccc--taactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccccctacgatttagc 2472  T

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Target: scaffold0093; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 309
Target Start/End: Complemental strand, 7187 - 7095
Alignment:
Q  216 gctaaagtgcacttttccccccttaacttttaaaaat-ttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||||||||  ||||||| |||||  ||||||||||| || ||||||||||||||| || |||||||||||||| ||||||||    
T  7187 gctaaagtgcacttttccccc--taactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccccctacgatttagc 7095  T

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Target: scaffold0369 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 214 - 307
Target Start/End: Original strand, 13192 - 13283
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagattta 307  Q
    |||||||||||||||||||||||  ||||||| ||||| |||  |||||| ||||||| |||| |||||||||||||| | |||||||||||||    
T  13192 aggctaaagtgcacttttccccc--taactttgaaaaagttgtgattttgacctcctatgtacgaaaactacaatttttgtcccctaagattta 13283  T

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Target: scaffold0049 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 309
Target Start/End: Complemental strand, 7517 - 7422
Alignment:
Q  214 aggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||| ||||||  ||| ||| ||||| || | |||||| || |||| ||||| |||||||||||||| ||||||||||||||||    
T  7517 aggctaaagtgcacttgtccccctctaagtttgaaaaagttacgattttgaccccctatgtacagaaactacaattttgaccccctaagatttagc 7422  T

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Target: scaffold0049; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 7538 - 7631
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    |||||||||||||||| |||||  ||| ||| ||||| ||| || |||| || |||| | ||||||||||||||||| || ||||| ||||||||    
T  7538 ggctaaagtgcacttt-ccccctataagtttgaaaaagttgtaaatttgaccccctatgaacaaaaactacaattttagctccctacgatttagc 7631  T

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Target: scaffold0227 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 309
Target Start/End: Complemental strand, 220 - 126
Alignment:
Q  215 ggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||||||||||||||||||| ||||||| ||||  |||| ||||||||| || | |||  ||||| ||||||||||||||||| | ||||||    
T  220 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagc 126  T

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Target: scaffold0059 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 216 - 301
Target Start/End: Complemental strand, 4829 - 4745
Alignment:
Q  216 gctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaa 301  Q
    ||||||||||||||| || |||| ||||||||||||  ||||||||||||| ||||| |||| |||||||||||||| ||| ||||    
T  4829 gctaaagtgcactttccctccct-aacttttaaaaacatgcaattttggccccctaaatacagaaactacaattttgaccctctaa 4745  T

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Target: scaffold0059; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 3699 - 3769
Alignment:
Q  239 taacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagc 309  Q
    ||||||| ||||| |||||||||||||| ||| |||| | |||||| |||||| | |||||||||||||||    
T  3699 taactttcaaaaacttgcaattttggccccctgagtaaagaaactataattttagtcccctaagatttagc 3769  T

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Target: scaffold0186 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 309
Target Start/End: Original strand, 23072 - 23173
Alignment:
Q  206 taaattataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctcctaagtacaaaaactacaattttggccccctaagatt 305  Q
    |||||| | ||||||||||||||||||||||  ||||||| ||||| ||||||||||| ||  |||||||| ||||| ||||| |||  |||||||| ||    
T  23072 taaatttttggctaaagtgcacttttccccc--taactttcaaaaacttgcaattttgtccctctaagtaccaaaacaacaatcttgctcccctaagctt 23169  T
Q  306 tagc 309  Q
    ||||    
T  23170 tagc 23173  T

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Target: scaffold0186; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 265
Target Start/End: Complemental strand, 23993 - 23941
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggc 265  Q
    |||||||||||||||||||  | || ||||||| ||||| |||||||||||||    
T  23993 taggctaaagtgcacttttttctccctaactttcaaaaacttgcaattttggc 23941  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 271
Target Start/End: Original strand, 454927 - 454985
Alignment:
Q  213 taggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctccta 271  Q
    |||||||||||||||||||| ||| |||| ||||||||| |||  ||||||||| ||||    
T  454927 taggctaaagtgcacttttcacccattaagttttaaaaagttgtgattttggcccccta 454985  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 35129 - 35186
Alignment:
Q  211 tataggctaaagtgcacttttccccccttaacttttaaaaatttgcaattttggcctc 268  Q
    |||||| | ||||||| ||||  | |||||||||||||||| ||||||||||||||||    
T  35129 tataggtttaagtgcattttttacaccttaacttttaaaaaattgcaattttggcctc 35186  T

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