View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4780_high_59 (Length: 251)
Name: NF4780_high_59
Description: NF4780
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4780_high_59 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 10 - 251
Target Start/End: Complemental strand, 28833085 - 28832844
Alignment:
| Q |
10 |
attattcttcaaagaaaggtttcagacaacaatgctttattatgtttcttttgtttggggatttaaaaccttagtgactaagcttgttcaaattgtgatc |
109 |
Q |
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| T |
28833085 |
attattcttcaaagaaaggtttcagacaacaatgctttattatgtttcttttgtttggggatttaaaaccttagtgactaagcttgttcaaattgtgatc |
28832986 |
T |
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| Q |
110 |
cacaaccacctaatatatacatgtcaattctagttcaacttacttcaacnnnnnnnncttctaaattgtgagaatgaaccaattatttacaatttaattg |
209 |
Q |
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| T |
28832985 |
cacaaccacctaatatatacatgtcaattctagttcaacttacttcaacttttttttcttctaaattgtgagaatgaaccaattatttacaatttaattg |
28832886 |
T |
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| Q |
210 |
ataacttcattatagaggtttgattattttcaatatagttat |
251 |
Q |
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||||||||||||||||||||| |||||||||||||||||||| |
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| T |
28832885 |
ataacttcattatagaggtttaattattttcaatatagttat |
28832844 |
T |
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