View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4780_high_87 (Length: 203)
Name: NF4780_high_87
Description: NF4780
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4780_high_87 |
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Alignment Details
Target: chr2 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 16 - 180
Target Start/End: Original strand, 2503301 - 2503465
Alignment:
| Q |
16 |
caaaacaaacaaagcccttttcaactatactcaatattaaccatgttctagacaaaatttctcagctaaaaaatgttacacaaggattccatgaatcaca |
115 |
Q |
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| T |
2503301 |
caaaacaaacaaagcccttttcaactatactcaatattaaccatgttctagacaaaatttctcagctaaaaaatgttacacaaggattccatgaatcaca |
2503400 |
T |
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| Q |
116 |
gttgcaaatctcagtccctttggtggtagctggaattctttgcttcatagcttcatcgatatcaa |
180 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2503401 |
gttgcaaatctcagtccctttggtggtagctggaattctttgcttcatagcttcatcgatatcaa |
2503465 |
T |
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