View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4780_low_17 (Length: 383)

Name: NF4780_low_17
Description: NF4780
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4780_low_17
NF4780_low_17
[»] chr5 (8 HSPs)
chr5 (21-345)||(18403251-18403573)
chr5 (290-346)||(20512459-20512515)
chr5 (293-347)||(32391720-32391774)
chr5 (291-347)||(24779533-24779589)
chr5 (291-345)||(2974895-2974949)
chr5 (295-340)||(3333695-3333740)
chr5 (292-340)||(586678-586726)
chr5 (289-345)||(3999083-3999139)
[»] chr4 (10 HSPs)
chr4 (290-345)||(35383763-35383818)
chr4 (290-346)||(29697781-29697837)
chr4 (291-346)||(6207436-6207491)
chr4 (288-347)||(23759557-23759616)
chr4 (287-345)||(43074611-43074669)
chr4 (295-345)||(14449276-14449326)
chr4 (292-345)||(2653953-2654006)
chr4 (286-339)||(4411493-4411546)
chr4 (291-339)||(35830312-35830360)
chr4 (291-347)||(53924746-53924802)
[»] chr3 (12 HSPs)
chr3 (290-345)||(28712722-28712777)
chr3 (291-345)||(86825-86879)
chr3 (288-344)||(38957841-38957897)
chr3 (288-340)||(54718990-54719042)
chr3 (280-339)||(14349375-14349434)
chr3 (280-338)||(27178128-27178186)
chr3 (295-345)||(46226948-46226998)
chr3 (289-347)||(50420880-50420938)
chr3 (289-342)||(17773167-17773220)
chr3 (289-342)||(19074468-19074521)
chr3 (285-345)||(3193042-3193102)
chr3 (288-344)||(19404394-19404450)
[»] chr7 (11 HSPs)
chr7 (289-343)||(14247291-14247345)
chr7 (289-345)||(4049982-4050038)
chr7 (291-347)||(23826281-23826337)
chr7 (289-340)||(18504505-18504556)
chr7 (292-341)||(36580274-36580323)
chr7 (293-345)||(3247432-3247484)
chr7 (286-345)||(45697481-45697540)
chr7 (291-345)||(282862-282916)
chr7 (289-347)||(17876416-17876474)
chr7 (292-346)||(44312745-44312799)
chr7 (289-345)||(28350113-28350169)
[»] chr2 (9 HSPs)
chr2 (291-346)||(14489470-14489525)
chr2 (292-345)||(34679351-34679404)
chr2 (292-343)||(18709247-18709298)
chr2 (291-345)||(19206141-19206195)
chr2 (292-345)||(15023099-15023152)
chr2 (295-339)||(5470333-5470377)
chr2 (289-345)||(14289263-14289318)
chr2 (295-339)||(34761127-34761171)
chr2 (282-346)||(36177350-36177414)
[»] chr6 (7 HSPs)
chr6 (288-346)||(1377466-1377524)
chr6 (288-346)||(1385214-1385272)
chr6 (291-345)||(3579594-3579648)
chr6 (291-340)||(238929-238978)
chr6 (290-345)||(12766475-12766530)
chr6 (287-341)||(2017167-2017221)
chr6 (291-341)||(10727189-10727239)
[»] chr1 (5 HSPs)
chr1 (290-344)||(39642198-39642252)
chr1 (288-341)||(30849494-30849547)
chr1 (290-341)||(3612453-3612504)
chr1 (294-345)||(23891662-23891713)
chr1 (291-346)||(25085398-25085453)
[»] chr8 (7 HSPs)
chr8 (288-345)||(17070903-17070960)
chr8 (288-345)||(17577312-17577369)
chr8 (293-345)||(33298594-33298646)
chr8 (291-347)||(39889771-39889827)
chr8 (289-345)||(41487197-41487253)
chr8 (292-346)||(20228231-20228285)
chr8 (290-339)||(521709-521758)
[»] scaffold0248 (1 HSPs)
scaffold0248 (293-345)||(671-723)
[»] scaffold0166 (1 HSPs)
scaffold0166 (291-347)||(21916-21972)
[»] scaffold0001 (1 HSPs)
scaffold0001 (288-340)||(405064-405116)


Alignment Details
Target: chr5 (Bit Score: 261; Significance: 1e-145; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 21 - 345
Target Start/End: Complemental strand, 18403573 - 18403251
Alignment:
Q  21 agggaaatgttggaaactttgtcttggaggtatgttatgttttatataagattgaaacagaattatcttgaacaggatttgaaaaatgctatcactactt 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18403573 agggaaatgttggaaactttgtcttggaggtatgttatgttttatataagattgaaacagaattatcttgaacaggatttgagaaatgctatcactactt 18403474  T
Q  121 tgcctgaaaatcgtcgcaaggagtatgttaaaactgcaaatgagttggttgataacttgactgaggtatgtatgattaatttttagtgcttgttttgtta 220  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||    
T  18403473 tgcctgaaaatcgtcgcaaggagtatgttaaaactgctaatgagttggttgataatttgactgaggtatgtatgattaatttttagtg-gtgttttgtta 18403375  T
Q  221 atttgatgaatgaattgaataaatctatgaatagatatacaacttctgctatattgatgtgttttttaaaaggcttaatagcagttttcgtctcctaatt 320  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| | ||||| |    
T  18403374 atttgatgaatgaattgaataagtctatgaatagatatacaacttctgctatactgatgtgtgctttaaaaggcttaatagcagttttcgccacctaact 18403275  T
Q  321 ttcatgaagttgtgattttggcccc 345  Q
    |||||| ||||| ||||||||||||    
T  18403274 ttcatg-agttgcgattttggcccc 18403251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 20512515 - 20512459
Alignment:
Q  290 aaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccct 346  Q
    ||||||||||||||||||||| ||| ||| ||||| ||||||| |||||||||||||    
T  20512515 aaggcttaatagcagttttcgcctcttaactttcacgaagttgcgattttggcccct 20512459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 32391720 - 32391774
Alignment:
Q  293 gcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccctt 347  Q
    |||||||||||||||||| | | ||| ||||| ||||||||||||||||||||||    
T  32391720 gcttaatagcagttttcgccccttaactttcacgaagttgtgattttggcccctt 32391774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 24779589 - 24779533
Alignment:
Q  291 aggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccctt 347  Q
    |||||||||||||||||||||| ||||| ||| |||  |||| ||||||||||||||    
T  24779589 aggcttaatagcagttttcgtcccctaacttttatgctgttgcgattttggcccctt 24779533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 345
Target Start/End: Complemental strand, 2974949 - 2974895
Alignment:
Q  291 aggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccc 345  Q
    |||||||||||||||||| | | ||||| ||||| ||||||| ||||||||||||    
T  2974949 aggcttaatagcagtttttgccccctaactttcacgaagttgcgattttggcccc 2974895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 340
Target Start/End: Original strand, 3333695 - 3333740
Alignment:
Q  295 ttaatagcagttttcgtctcctaattttcatgaagttgtgattttg 340  Q
    |||||||||||||||| | ||||| ||||||||||||| |||||||    
T  3333695 ttaatagcagttttcgccccctaactttcatgaagttgcgattttg 3333740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 340
Target Start/End: Complemental strand, 586726 - 586678
Alignment:
Q  292 ggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttg 340  Q
    |||||||||||| ||||||||  |||| ||||||||||||| |||||||    
T  586726 ggcttaatagcaattttcgtcctctaactttcatgaagttgcgattttg 586678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 3999083 - 3999139
Alignment:
Q  289 aaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccc 345  Q
    ||||| |||||||||||||||| | ||||| ||||| ||||||| ||||||| ||||    
T  3999083 aaaggtttaatagcagttttcgccccctaactttcacgaagttgcgattttgacccc 3999139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 345
Target Start/End: Original strand, 35383763 - 35383818
Alignment:
Q  290 aaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccc 345  Q
    ||||||||||||||||||||| | ||||| ||||| ||||||||||||||||||||    
T  35383763 aaggcttaatagcagttttcgccccctaactttcacgaagttgtgattttggcccc 35383818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 29697837 - 29697781
Alignment:
Q  290 aaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccct 346  Q
    ||||||||||||||||||||  ||||||| ||||||||||||| |||||||| ||||    
T  29697837 aaggcttaatagcagttttcacctcctaactttcatgaagttgcgattttggtccct 29697781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 346
Target Start/End: Complemental strand, 6207491 - 6207436
Alignment:
Q  291 aggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccct 346  Q
    |||||||||||||||||| | | |||||||||| | ||||||||||||||||||||    
T  6207491 aggcttaatagcagttttagccccctaattttcctaaagttgtgattttggcccct 6207436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 347
Target Start/End: Original strand, 23759557 - 23759616
Alignment:
Q  288 aaaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccctt 347  Q
    |||||||||||||| |||||||| | ||||| |||||| |||||| ||||||||||||||    
T  23759557 aaaaggcttaatagtagttttcgccccctaactttcataaagttgcgattttggcccctt 23759616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 43074611 - 43074669
Alignment:
Q  287 taaaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccc 345  Q
    ||||||||||||||||| |||||| | ||||| ||||| ||||||| ||||||||||||    
T  43074611 taaaaggcttaatagcaattttcgccccctaactttcacgaagttgcgattttggcccc 43074669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 14449276 - 14449326
Alignment:
Q  295 ttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccc 345  Q
    |||||||||||||||| | ||||| ||||| ||||||| ||||||||||||    
T  14449276 ttaatagcagttttcgccccctaactttcacgaagttgagattttggcccc 14449326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 345
Target Start/End: Original strand, 2653953 - 2654006
Alignment:
Q  292 ggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccc 345  Q
    ||||||||||||||||| | ||||||| ||| | ||||||| ||||||||||||    
T  2653953 ggcttaatagcagtttttgcctcctaacttttacgaagttgcgattttggcccc 2654006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 339
Target Start/End: Complemental strand, 4411546 - 4411493
Alignment:
Q  286 ttaaaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgatttt 339  Q
    |||||||| |||||| ||||||||| | ||||||||||| ||||||| ||||||    
T  4411546 ttaaaaggtttaataacagttttcgccccctaattttcacgaagttgcgatttt 4411493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 339
Target Start/End: Complemental strand, 35830360 - 35830312
Alignment:
Q  291 aggcttaatagcagttttcgtctcctaattttcatgaagttgtgatttt 339  Q
    |||||||||||||||||| | ||||||  ||||| ||||||||||||||    
T  35830360 aggcttaatagcagttttggcctcctatatttcaagaagttgtgatttt 35830312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 53924746 - 53924802
Alignment:
Q  291 aggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccctt 347  Q
    ||||||||||| |||| ||| | ||||| ||||| ||||||||||||||| ||||||    
T  53924746 aggcttaatagtagttctcgccccctaactttcacgaagttgtgattttgacccctt 53924802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 345
Target Start/End: Complemental strand, 28712777 - 28712722
Alignment:
Q  290 aaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccc 345  Q
    ||||||||||||||||||||| | ||||| ||| ||||||||||||||||||||||    
T  28712777 aaggcttaatagcagttttcgccccctaacttttatgaagttgtgattttggcccc 28712722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 291 - 345
Target Start/End: Complemental strand, 86879 - 86825
Alignment:
Q  291 aggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccc 345  Q
    ||||||||||| |||||||||| ||||| ||||||||||||| ||||||||||||    
T  86879 aggcttaataggagttttcgtcccctaactttcatgaagttgcgattttggcccc 86825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 38957841 - 38957897
Alignment:
Q  288 aaaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggccc 344  Q
    ||||||||||||||||||||| | |||||||||||  | |||||| |||||||||||    
T  38957841 aaaaggcttaatagcagttttagcctcctaatttttttaaagttgcgattttggccc 38957897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 340
Target Start/End: Original strand, 54718990 - 54719042
Alignment:
Q  288 aaaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttg 340  Q
    |||||||||||||||||||||||||  |||| ||||| ||||||| |||||||    
T  54718990 aaaaggcttaatagcagttttcgtccactaactttcacgaagttgcgattttg 54719042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 280 - 339
Target Start/End: Complemental strand, 14349434 - 14349375
Alignment:
Q  280 tgttttttaaaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgatttt 339  Q
    |||||||||| |||||||||||||||||||| | ||||| ||| | ||||||| ||||||    
T  14349434 tgttttttaataggcttaatagcagttttcgccccctaacttttacgaagttgcgatttt 14349375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 338
Target Start/End: Original strand, 27178128 - 27178186
Alignment:
Q  280 tgttttttaaaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattt 338  Q
    ||||||| |||| |||||||||||||||||||| ||||| ||| | ||||||| |||||    
T  27178128 tgtttttaaaaaagcttaatagcagttttcgtcccctaacttttacgaagttgcgattt 27178186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 46226998 - 46226948
Alignment:
Q  295 ttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccc 345  Q
    |||||||||||||||||| ||||| ||||| ||||||| ||||||| ||||    
T  46226998 ttaatagcagttttcgtcccctaactttcacgaagttgcgattttgacccc 46226948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 50420938 - 50420880
Alignment:
Q  289 aaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccctt 347  Q
    |||||||||||||||||||| | ||||||| | | ||||||||| ||||||| ||||||    
T  50420938 aaaggcttaatagcagttttggcctcctaagtattatgaagttgcgattttgacccctt 50420880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 17773167 - 17773220
Alignment:
Q  289 aaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggc 342  Q
    |||||||||||||||||||||| | ||||| |||||  |||||| |||||||||    
T  17773167 aaaggcttaatagcagttttcgccccctaactttcactaagttgcgattttggc 17773220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 19074468 - 19074521
Alignment:
Q  289 aaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggc 342  Q
    |||||||||||||||||||||| | ||||| |||||  |||||| |||||||||    
T  19074468 aaaggcttaatagcagttttcgccccctaactttcactaagttgcgattttggc 19074521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 345
Target Start/End: Complemental strand, 3193102 - 3193042
Alignment:
Q  285 tttaaaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccc 345  Q
    ||||| |||||||||||||||||||  | ||||| ||||| ||||||| ||||||| ||||    
T  3193102 tttaataggcttaatagcagttttcaccccctaactttcaagaagttgcgattttgacccc 3193042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 19404394 - 19404450
Alignment:
Q  288 aaaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggccc 344  Q
    |||| |||||||| ||||||||||| ||||| ||||| ||||||| |||||| ||||    
T  19404394 aaaaagcttaataacagttttcgtcccctaactttcacgaagttgcgattttagccc 19404450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 14247291 - 14247345
Alignment:
Q  289 aaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcc 343  Q
    |||||||||||||||||||||| | ||||| ||||| ||||||||||||||||||    
T  14247291 aaaggcttaatagcagttttcgccacctaactttcacgaagttgtgattttggcc 14247345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 345
Target Start/End: Complemental strand, 4050038 - 4049982
Alignment:
Q  289 aaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccc 345  Q
    |||||||||||||||||||||| | | ||| ||||| ||||||||||||||||||||    
T  4050038 aaaggcttaatagcagttttcgccccttaactttcacgaagttgtgattttggcccc 4049982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 23826337 - 23826281
Alignment:
Q  291 aggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccctt 347  Q
    |||||||||||||||||| ||| ||||| ||||| ||||||| ||||||||||||||    
T  23826337 aggcttaatagcagtttttgtcccctaactttcacgaagttgcgattttggcccctt 23826281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 340
Target Start/End: Complemental strand, 18504556 - 18504505
Alignment:
Q  289 aaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttg 340  Q
    |||||||||||| ||||||||||| ||||| ||||||||||||| |||||||    
T  18504556 aaaggcttaataacagttttcgtcccctaactttcatgaagttgcgattttg 18504505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 341
Target Start/End: Original strand, 36580274 - 36580323
Alignment:
Q  292 ggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttgg 341  Q
    ||||||||||||||||||| | ||||| ||||| ||||||||||||||||    
T  36580274 ggcttaatagcagttttcggcccctaactttcacgaagttgtgattttgg 36580323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 3247484 - 3247432
Alignment:
Q  293 gcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccc 345  Q
    |||||||| || |||||||| ||||| ||||| ||||||||||||||||||||    
T  3247484 gcttaataacaattttcgtcccctaactttcacgaagttgtgattttggcccc 3247432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 345
Target Start/End: Original strand, 45697481 - 45697540
Alignment:
Q  286 ttaaaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccc 345  Q
    |||| |||||||||| ||||||||||| ||||| ||||  ||||||| ||||||||||||    
T  45697481 ttaataggcttaataacagttttcgtcccctaactttctcgaagttgcgattttggcccc 45697540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 345
Target Start/End: Complemental strand, 282916 - 282862
Alignment:
Q  291 aggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccc 345  Q
    |||||||||||||||||| | ||||||  ||||| ||||||| ||||||||||||    
T  282916 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggcccc 282862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 17876474 - 17876416
Alignment:
Q  289 aaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccctt 347  Q
    |||||||||||||||||||||  | ||||| ||||| ||||||  ||||||||||||||    
T  17876474 aaaggcttaatagcagttttcaccccctaactttcacgaagttacgattttggcccctt 17876416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 346
Target Start/End: Original strand, 44312745 - 44312799
Alignment:
Q  292 ggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccct 346  Q
    ||||||||| ||||||||||||||||| ||| | ||||||| ||||||| |||||    
T  44312745 ggcttaataacagttttcgtctcctaacttttacgaagttgcgattttgacccct 44312799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 28350113 - 28350169
Alignment:
Q  289 aaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccc 345  Q
    |||||||||||||||||||| | | ||||| ||||| ||||||  ||||||||||||    
T  28350113 aaaggcttaatagcagttttagccccctaactttcacgaagttacgattttggcccc 28350169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000004; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 346
Target Start/End: Complemental strand, 14489525 - 14489470
Alignment:
Q  291 aggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccct 346  Q
    |||||||||||||||||||| | ||||| ||||| ||||||| |||||||||||||    
T  14489525 aggcttaatagcagttttcgccccctaactttcacgaagttgcgattttggcccct 14489470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 345
Target Start/End: Complemental strand, 34679404 - 34679351
Alignment:
Q  292 ggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccc 345  Q
    ||||||||||||||||| | | ||||| ||||| ||||||||||||||||||||    
T  34679404 ggcttaatagcagtttttgccccctaactttcacgaagttgtgattttggcccc 34679351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 18709247 - 18709298
Alignment:
Q  292 ggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcc 343  Q
    ||||||||||||||||||||| ||||| ||||| ||||||  ||||||||||    
T  18709247 ggcttaatagcagttttcgtcccctaactttcacgaagtttcgattttggcc 18709298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 345
Target Start/End: Original strand, 19206141 - 19206195
Alignment:
Q  291 aggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccc 345  Q
    ||||||||||||| |||||| | |||||||||||  |||||| ||||||||||||    
T  19206141 aggcttaatagcaattttcgccccctaattttcacaaagttgcgattttggcccc 19206195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 345
Target Start/End: Complemental strand, 15023152 - 15023099
Alignment:
Q  292 ggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccc 345  Q
    ||||||||||||||||| | | ||||| ||||| ||||||||||||||| ||||    
T  15023152 ggcttaatagcagttttggccccctaactttcaagaagttgtgattttgacccc 15023099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 5470333 - 5470377
Alignment:
Q  295 ttaatagcagttttcgtctcctaattttcatgaagttgtgatttt 339  Q
    |||||||||||||||||| ||| ||||||| ||||||| ||||||    
T  5470333 ttaatagcagttttcgtccccttattttcacgaagttgcgatttt 5470377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 14289263 - 14289318
Alignment:
Q  289 aaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccc 345  Q
    ||||||||||||||||||||   ||||||| | ||||||||||| ||||||||||||    
T  14289263 aaaggcttaatagcagtttttc-ctcctaagtatcatgaagttgcgattttggcccc 14289318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 34761171 - 34761127
Alignment:
Q  295 ttaatagcagttttcgtctcctaattttcatgaagttgtgatttt 339  Q
    |||||||||||||||||| ||||| ||||| ||||||| ||||||    
T  34761171 ttaatagcagttttcgtcccctaactttcacgaagttgcgatttt 34761127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 346
Target Start/End: Complemental strand, 36177414 - 36177350
Alignment:
Q  282 ttttttaaaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccct 346  Q
    |||| |||||||||||||| ||||||| | | | ||| ||||| ||||||| |||||||||||||    
T  36177414 ttttataaaaggcttaataacagttttagccccttaagtttcaagaagttgcgattttggcccct 36177350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 346
Target Start/End: Complemental strand, 1377524 - 1377466
Alignment:
Q  288 aaaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccct 346  Q
    |||||| |||||| ||||||||||| ||||| ||||| ||||||| |||||||||||||    
T  1377524 aaaaggtttaatatcagttttcgtcccctaactttcacgaagttgcgattttggcccct 1377466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 346
Target Start/End: Complemental strand, 1385272 - 1385214
Alignment:
Q  288 aaaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccct 346  Q
    |||||| |||||| ||||||||||| ||||| ||||| ||||||| |||||||||||||    
T  1385272 aaaaggtttaatatcagttttcgtcccctaactttcacgaagttgcgattttggcccct 1385214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 345
Target Start/End: Original strand, 3579594 - 3579648
Alignment:
Q  291 aggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccc 345  Q
    |||||||||||||||||||||| | ||| ||||| ||||||| ||||||||||||    
T  3579594 aggcttaatagcagttttcgtcccttaactttcacgaagttgcgattttggcccc 3579648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 291 - 340
Target Start/End: Original strand, 238929 - 238978
Alignment:
Q  291 aggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttg 340  Q
    |||||||||||||||||||| | ||||||||||| ||||||| |||||||    
T  238929 aggcttaatagcagttttcgccccctaattttcacgaagttgcgattttg 238978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 345
Target Start/End: Complemental strand, 12766530 - 12766475
Alignment:
Q  290 aaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccc 345  Q
    ||||||||||||||||||||  | ||||| ||||| ||||||| ||||||||||||    
T  12766530 aaggcttaatagcagttttcaccccctaactttcacgaagttgcgattttggcccc 12766475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 2017167 - 2017221
Alignment:
Q  287 taaaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttgg 341  Q
    ||||||||||||| ||| |||| ||| ||||| ||||| ||||||||||||||||    
T  2017167 taaaaggcttaattgcatttttggtcccctaagtttcaagaagttgtgattttgg 2017221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 341
Target Start/End: Original strand, 10727189 - 10727239
Alignment:
Q  291 aggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttgg 341  Q
    |||||||||||||||||||| ||||||| |||   ||||||||||||||||    
T  10727189 aggcttaatagcagttttcgcctcctaactttagcgaagttgtgattttgg 10727239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000001; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 39642198 - 39642252
Alignment:
Q  290 aaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggccc 344  Q
    ||||||||||||||||||||| | ||||| ||||| ||||||| |||||||||||    
T  39642198 aaggcttaatagcagttttcgccccctaactttcacgaagttgcgattttggccc 39642252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 30849547 - 30849494
Alignment:
Q  288 aaaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttgg 341  Q
    ||||||||||||||||||||| |||||||||||||  | |||||| ||||||||    
T  30849547 aaaaggcttaatagcagttttagtctcctaatttttttaaagttgcgattttgg 30849494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 341
Target Start/End: Complemental strand, 3612504 - 3612453
Alignment:
Q  290 aaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttgg 341  Q
    ||||||||||||||||||| ||| ||||| ||||| ||||||| ||||||||    
T  3612504 aaggcttaatagcagttttagtcccctaagtttcaagaagttgagattttgg 3612453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 345
Target Start/End: Original strand, 23891662 - 23891713
Alignment:
Q  294 cttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccc 345  Q
    |||||||||||||||||   ||||| ||||| ||||||||||||||||||||    
T  23891662 cttaatagcagttttcgctccctaactttcacgaagttgtgattttggcccc 23891713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 291 - 346
Target Start/End: Original strand, 25085398 - 25085453
Alignment:
Q  291 aggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccct 346  Q
    |||||||||||||||||||| | ||||| |||||| |||||| ||||||| |||||    
T  25085398 aggcttaatagcagttttcgccccctaactttcataaagttgcgattttgacccct 25085453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000005; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 345
Target Start/End: Original strand, 17070903 - 17070960
Alignment:
Q  288 aaaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccc 345  Q
    ||||||||||||||||||||||| | | ||| ||||| ||||||| ||||||||||||    
T  17070903 aaaaggcttaatagcagttttcgccccttaactttcacgaagttgcgattttggcccc 17070960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 345
Target Start/End: Complemental strand, 17577369 - 17577312
Alignment:
Q  288 aaaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccc 345  Q
    ||||||||||||||||||||||| | | ||| ||||| ||||||| ||||||||||||    
T  17577369 aaaaggcttaatagcagttttcgccccttaactttcacgaagttgcgattttggcccc 17577312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 33298646 - 33298594
Alignment:
Q  293 gcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccc 345  Q
    |||| ||||||||||||| ||||||| ||||| ||||||| ||||||||||||    
T  33298646 gcttgatagcagttttcgcctcctaactttcacgaagttgcgattttggcccc 33298594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 39889771 - 39889827
Alignment:
Q  291 aggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccctt 347  Q
    |||||||||||||||||||| ||| ||| ||||| |||||||  |||||||||||||    
T  39889771 aggcttaatagcagttttcgcctcttaactttcacgaagttgcaattttggcccctt 39889827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 41487197 - 41487253
Alignment:
Q  289 aaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccc 345  Q
    |||||||||||||||||||||| | || |||||||| ||||||| ||||||| ||||    
T  41487197 aaaggcttaatagcagttttcgcccccgaattttcacgaagttgcgattttgacccc 41487253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 346
Target Start/End: Original strand, 20228231 - 20228285
Alignment:
Q  292 ggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccct 346  Q
    ||||||||| ||||||||||||||||| ||| | ||||||| ||||||| |||||    
T  20228231 ggcttaataacagttttcgtctcctaacttttacgaagttgcgattttgacccct 20228285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 339
Target Start/End: Complemental strand, 521758 - 521709
Alignment:
Q  290 aaggcttaatagcagttttcgtctcctaattttcatgaagttgtgatttt 339  Q
    ||||||||||||||||||||  | ||||||||||| ||||||| ||||||    
T  521758 aaggcttaatagcagttttcaccccctaattttcacgaagttgcgatttt 521709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 723 - 671
Alignment:
Q  293 gcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccc 345  Q
    |||| ||||||||||||||||||||| ||| | ||||||| ||||||||||||    
T  723 gcttcatagcagttttcgtctcctaacttttacgaagttgcgattttggcccc 671  T

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Target: scaffold0166 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 21972 - 21916
Alignment:
Q  291 aggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttggcccctt 347  Q
    |||||||||||||||||||||| ||||| ||| |||  |||| ||||||||||||||    
T  21972 aggcttaatagcagttttcgtcccctaacttttatgctgttgcgattttggcccctt 21916  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 340
Target Start/End: Original strand, 405064 - 405116
Alignment:
Q  288 aaaaggcttaatagcagttttcgtctcctaattttcatgaagttgtgattttg 340  Q
    ||||||||||||||||||||| ||| ||||| ||| | |||||| ||||||||    
T  405064 aaaaggcttaatagcagttttagtcccctaagttttaagaagttatgattttg 405116  T

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