View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4780_low_54 (Length: 266)

Name: NF4780_low_54
Description: NF4780
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4780_low_54
NF4780_low_54
[»] chr1 (21 HSPs)
chr1 (12-54)||(31290103-31290145)
chr1 (4-47)||(51702999-51703042)
chr1 (12-53)||(51571561-51571602)
chr1 (1-53)||(22389410-22389461)
chr1 (2-53)||(48872836-48872888)
chr1 (10-53)||(2571639-2571682)
chr1 (10-53)||(3159380-3159423)
chr1 (10-53)||(8350220-8350263)
chr1 (10-53)||(30735317-30735360)
chr1 (10-53)||(37685335-37685378)
chr1 (10-53)||(37700140-37700183)
chr1 (7-53)||(40610364-40610410)
chr1 (7-53)||(43755576-43755622)
chr1 (7-53)||(49453612-49453658)
chr1 (7-44)||(4638069-4638106)
chr1 (7-44)||(49425880-49425917)
chr1 (12-44)||(7503610-7503642)
chr1 (10-50)||(15083077-15083117)
chr1 (7-47)||(28716284-28716324)
chr1 (10-53)||(35529403-35529447)
chr1 (12-44)||(45272052-45272084)
[»] chr7 (19 HSPs)
chr7 (2-53)||(8792485-8792536)
chr7 (7-53)||(40842541-40842588)
chr7 (7-53)||(10591287-10591333)
chr7 (7-53)||(12142019-12142065)
chr7 (18-54)||(12102610-12102646)
chr7 (7-53)||(7807189-7807236)
chr7 (10-53)||(13152597-13152640)
chr7 (10-53)||(30941390-30941433)
chr7 (7-53)||(40717128-40717175)
chr7 (10-53)||(44895596-44895639)
chr7 (12-53)||(19426714-19426756)
chr7 (7-53)||(21858882-21858928)
chr7 (12-53)||(32154445-32154487)
chr7 (12-53)||(7077648-7077689)
chr7 (7-51)||(32315963-32316008)
chr7 (12-44)||(28597024-28597056)
chr7 (14-53)||(43260125-43260165)
chr7 (7-43)||(43657147-43657183)
chr7 (12-44)||(47424880-47424912)
[»] chr5 (16 HSPs)
chr5 (7-53)||(39595409-39595455)
chr5 (2-50)||(33243626-33243674)
chr5 (12-53)||(31284289-31284330)
chr5 (6-53)||(125227-125274)
chr5 (10-53)||(1274362-1274405)
chr5 (2-53)||(2117525-2117576)
chr5 (7-53)||(3141630-3141677)
chr5 (2-53)||(9403648-9403699)
chr5 (2-53)||(19127259-19127310)
chr5 (10-53)||(19522027-19522070)
chr5 (10-53)||(28306156-28306199)
chr5 (4-53)||(3634628-3634678)
chr5 (7-53)||(20719905-20719951)
chr5 (7-53)||(24431508-24431554)
chr5 (10-50)||(18660763-18660803)
chr5 (7-43)||(42699194-42699230)
[»] chr4 (25 HSPs)
chr4 (12-50)||(3286956-3286994)
chr4 (7-53)||(1033283-1033329)
chr4 (7-53)||(15596531-15596577)
chr4 (12-53)||(51389451-51389492)
chr4 (7-53)||(1580172-1580219)
chr4 (7-50)||(5234361-5234404)
chr4 (10-53)||(5622462-5622505)
chr4 (7-53)||(22257086-22257133)
chr4 (10-53)||(23369356-23369399)
chr4 (10-53)||(26732229-26732272)
chr4 (7-53)||(31240783-31240830)
chr4 (7-50)||(31275284-31275327)
chr4 (7-53)||(36792467-36792514)
chr4 (10-53)||(37997260-37997303)
chr4 (7-54)||(38844380-38844427)
chr4 (2-53)||(42915104-42915155)
chr4 (7-50)||(46173675-46173718)
chr4 (7-53)||(11063979-11064025)
chr4 (7-53)||(30042268-30042314)
chr4 (1-50)||(25476759-25476808)
chr4 (10-51)||(40847504-40847545)
chr4 (7-50)||(2613506-2613550)
chr4 (13-53)||(31658054-31658094)
chr4 (10-50)||(37297053-37297093)
chr4 (10-53)||(51734656-51734700)
[»] chr8 (14 HSPs)
chr8 (2-53)||(34474085-34474137)
chr8 (10-53)||(13971129-13971172)
chr8 (7-53)||(32175090-32175137)
chr8 (7-53)||(21273600-21273646)
chr8 (10-53)||(27325762-27325805)
chr8 (12-54)||(38576543-38576586)
chr8 (7-53)||(45101530-45101577)
chr8 (7-53)||(7678867-7678913)
chr8 (7-53)||(10552976-10553022)
chr8 (7-53)||(23258167-23258213)
chr8 (12-53)||(38128421-38128462)
chr8 (10-50)||(22719444-22719484)
chr8 (10-50)||(31249551-31249591)
chr8 (10-53)||(33100492-33100536)
[»] chr3 (18 HSPs)
chr3 (2-53)||(11173585-11173636)
chr3 (7-53)||(46003841-46003888)
chr3 (7-53)||(20380779-20380825)
chr3 (7-53)||(46473263-46473309)
chr3 (7-50)||(7231896-7231939)
chr3 (10-53)||(26014816-26014859)
chr3 (10-53)||(42357104-42357147)
chr3 (7-53)||(43169644-43169691)
chr3 (12-47)||(44695153-44695188)
chr3 (10-53)||(46623911-46623954)
chr3 (10-53)||(47472333-47472376)
chr3 (10-53)||(52939657-52939700)
chr3 (7-53)||(29706038-29706084)
chr3 (12-53)||(31249216-31249258)
chr3 (12-53)||(51650491-51650533)
chr3 (7-44)||(6126599-6126636)
chr3 (10-53)||(10811139-10811183)
chr3 (1-53)||(13735124-13735176)
[»] chr2 (11 HSPs)
chr2 (7-53)||(36133109-36133155)
chr2 (12-53)||(12600183-12600224)
chr2 (10-53)||(2464272-2464315)
chr2 (10-53)||(8848719-8848762)
chr2 (10-53)||(18254233-18254276)
chr2 (10-53)||(27490754-27490797)
chr2 (10-53)||(41042258-41042301)
chr2 (12-53)||(45515494-45515536)
chr2 (12-53)||(11164271-11164312)
chr2 (7-44)||(34138926-34138963)
chr2 (10-53)||(43666702-43666746)
[»] chr6 (6 HSPs)
chr6 (10-53)||(8098619-8098662)
chr6 (2-53)||(16336955-16337006)
chr6 (10-53)||(22079587-22079630)
chr6 (10-53)||(25811862-25811905)
chr6 (10-53)||(34047391-34047434)
chr6 (12-53)||(2241721-2241762)


Alignment Details
Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 31290103 - 31290145
Alignment:
Q  12 tgatatttgaacaaccatttcacacaacttttgtgacaactta 54  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  31290103 tgatatttgaacaaccatttcacacaacttttgtgacaactta 31290145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 51702999 - 51703042
Alignment:
Q  4 aatagtaatgatatttgaacaaccatttcacacaacttttgtga 47  Q
    ||||||| |||||||||||||||||||||| |||||||||||||    
T  51702999 aatagtagtgatatttgaacaaccatttcagacaacttttgtga 51703042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 51571602 - 51571561
Alignment:
Q  12 tgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||||||||||||||||||| | |||||||||||||||||||    
T  51571602 tgatatttgaacaaccatttaatacaacttttgtgacaactt 51571561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 22389410 - 22389461
Alignment:
Q  1 caaaatagtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||    
T  22389410 caaaagagtaatgatatttgaacaaccatttga-tcaacttttgtgacaactt 22389461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 48872836 - 48872888
Alignment:
Q  2 aaaatagtaatgatatttgaacaaccatttcacacaactttt-gtgacaactt 53  Q
    |||| |||| |||||||||||||||||||||| ||||||||| ||||||||||    
T  48872836 aaaagagtagtgatatttgaacaaccatttcatacaacttttggtgacaactt 48872888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 2571639 - 2571682
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  2571639 aatgatatttgaacaaccattttttacaacttttgtgacaactt 2571682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 3159380 - 3159423
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  3159380 aatgatatttgaacaaccattttttacaacttttgtgacaactt 3159423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 8350263 - 8350220
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  8350263 aatgatatttgaacaaccattttttacaacttttgtgacaactt 8350220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 30735360 - 30735317
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  30735360 aatgatatttgaacaaccattttttacaacttttgtgacaactt 30735317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 37685335 - 37685378
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  37685335 aatgatatttgaacaaccattttttacaacttttgtgacaactt 37685378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 37700183 - 37700140
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  37700183 aatgatatttgaacaaccattttttacaacttttgtgacaactt 37700140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 40610410 - 40610364
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||| ||||||||||||| |||||| | |||||||||||||||||||    
T  40610410 agtagtgatatttgaacatccatttgagacaacttttgtgacaactt 40610364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 43755576 - 43755622
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||||||||||||||||| |||||| | |||||| ||||||||||||    
T  43755576 agtaatgatatttgaacatccatttgagacaactcttgtgacaactt 43755622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 49453658 - 49453612
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||| ||||||||||||||| |||| | |||||||||||||||||||    
T  49453658 agtagtgatatttgaacaactatttgatacaacttttgtgacaactt 49453612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 4638106 - 4638069
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttg 44  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  4638106 agtagtgatatttgaacaaccatttcatacaacttttg 4638069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 49425917 - 49425880
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttg 44  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  49425917 agtagtgatatttgaacaaccatttcatacaacttttg 49425880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 7503642 - 7503610
Alignment:
Q  12 tgatatttgaacaaccatttcacacaacttttg 44  Q
    |||||||||||||||||||||| ||||||||||    
T  7503642 tgatatttgaacaaccatttcatacaacttttg 7503610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 15083117 - 15083077
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaa 50  Q
    ||||||||||||||||||||||   ||||||||||||||||    
T  15083117 aatgatatttgaacaaccatttttgacaacttttgtgacaa 15083077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 28716324 - 28716284
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttgtga 47  Q
    |||| |||||||||||||||||||| | |||||||||||||    
T  28716324 agtagtgatatttgaacaaccatttgagacaacttttgtga 28716284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 35529447 - 35529403
Alignment:
Q  10 aatgatatttgaacaacc-atttcacacaacttttgtgacaactt 53  Q
    |||||||||||||||||| |||| | |||||||||||||||||||    
T  35529447 aatgatatttgaacaaccgattttagacaacttttgtgacaactt 35529403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 45272052 - 45272084
Alignment:
Q  12 tgatatttgaacaaccatttcacacaacttttg 44  Q
    |||||||||||||||||||||| ||||||||||    
T  45272052 tgatatttgaacaaccatttcatacaacttttg 45272084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 8792485 - 8792536
Alignment:
Q  2 aaaatagtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||| ||||||||||||||||||||||||| | |||||||||||||||||||    
T  8792485 aaaagagtaatgatatttgaacaaccatttgatacaacttttgtgacaactt 8792536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 40842588 - 40842541
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaactttt-gtgacaactt 53  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  40842588 agtaatgatatttgaacaaccatttcatacaacttttggtgacaactt 40842541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 10591333 - 10591287
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||| |||||||||||||||||||| | |||||||||||||||||||    
T  10591333 agtagtgatatttgaacaaccatttgagacaacttttgtgacaactt 10591287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 12142065 - 12142019
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||| |||||||||||||||||||| | |||||||||||||||||||    
T  12142065 agtagtgatatttgaacaaccatttgatacaacttttgtgacaactt 12142019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 12102610 - 12102646
Alignment:
Q  18 ttgaacaaccatttcacacaacttttgtgacaactta 54  Q
    |||||||||||||||| ||||||||||||||||||||    
T  12102610 ttgaacaaccatttcagacaacttttgtgacaactta 12102646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 7807236 - 7807189
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttg-tgacaactt 53  Q
    |||| |||||||||||||||||||||| |||||||||| |||||||||    
T  7807236 agtagtgatatttgaacaaccatttcatacaacttttgatgacaactt 7807189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 13152597 - 13152640
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  13152597 aatgatatttgaacaaccatttttgacaacttttgtgacaactt 13152640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 30941390 - 30941433
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  30941390 aatgatatttgaacaaccattttttacaacttttgtgacaactt 30941433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 40717128 - 40717175
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaac-ttttgtgacaactt 53  Q
    |||| |||||||||||||||||||||| ||||| ||||||||||||||    
T  40717128 agtagtgatatttgaacaaccatttcatacaactttttgtgacaactt 40717175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 44895639 - 44895596
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  44895639 aatgatatttgaacaaccattttttacaacttttgtgacaactt 44895596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 19426756 - 19426714
Alignment:
Q  12 tgatatttgaacaaccatttcacacaactttt-gtgacaactt 53  Q
    |||||||||||||||||||||| ||||||||| ||||||||||    
T  19426756 tgatatttgaacaaccatttcatacaacttttggtgacaactt 19426714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 21858928 - 21858882
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||| |||||||||||||||||||| | ||||||||||||| |||||    
T  21858928 agtagtgatatttgaacaaccattttaaacaacttttgtgataactt 21858882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 32154445 - 32154487
Alignment:
Q  12 tgatatttgaacaaccatttcacacaactttt-gtgacaactt 53  Q
    |||||||||||||||||||||| ||||||||| ||||||||||    
T  32154445 tgatatttgaacaaccatttcatacaacttttggtgacaactt 32154487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 7077648 - 7077689
Alignment:
Q  12 tgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||| |||| | |||||||||||||||||||    
T  7077648 tgatatttgaacaactattttaaacaacttttgtgacaactt 7077689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 32316008 - 32315963
Alignment:
Q  7 agtaatgatatttgaacaaccatttcac-acaacttttgtgacaac 51  Q
    |||||||||||||||||||| |||| || |||||||||||||||||    
T  32316008 agtaatgatatttgaacaactatttgacgacaacttttgtgacaac 32315963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 28597056 - 28597024
Alignment:
Q  12 tgatatttgaacaaccatttcacacaacttttg 44  Q
    |||||||||||||||||||||| ||||||||||    
T  28597056 tgatatttgaacaaccatttcatacaacttttg 28597024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 43260165 - 43260125
Alignment:
Q  14 atatttgaacaaccatttcacacaacttttg-tgacaactt 53  Q
    |||||||||||||||||||| |||||||||| |||||||||    
T  43260165 atatttgaacaaccatttcatacaacttttgatgacaactt 43260125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 43657183 - 43657147
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaactttt 43  Q
    |||| |||||||||||||||||||||| |||||||||    
T  43657183 agtagtgatatttgaacaaccatttcatacaactttt 43657147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 47424880 - 47424912
Alignment:
Q  12 tgatatttgaacaaccatttcacacaacttttg 44  Q
    |||||||||||||||||||||| ||||||||||    
T  47424880 tgatatttgaacaaccatttcatacaacttttg 47424912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 39595455 - 39595409
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||    
T  39595455 agtaatgatatttgaacaaccatttgatacaacttttgtgacaactt 39595409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 33243626 - 33243674
Alignment:
Q  2 aaaatagtaatgatatttgaacaaccatttcacacaacttttgtgacaa 50  Q
    |||| ||||||||||||||||||||||||||| | ||||||||||||||    
T  33243626 aaaagagtaatgatatttgaacaaccatttcagataacttttgtgacaa 33243674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 31284289 - 31284330
Alignment:
Q  12 tgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||||||||||||||||||||| |||||||||| ||||||||    
T  31284289 tgatatttgaacaaccatttcatacaacttttgcgacaactt 31284330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 125274 - 125227
Alignment:
Q  6 tagtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||| |||||||||||||||||||| | |||||||||| ||||||||    
T  125274 tagtagtgatatttgaacaaccatttgatacaacttttgcgacaactt 125227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 1274362 - 1274405
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  1274362 aatgatatttgaacaaccatttttgacaacttttgtgacaactt 1274405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 2117525 - 2117576
Alignment:
Q  2 aaaatagtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||| |||| ||||||||||||||| |||| | |||||||||||||||||||    
T  2117525 aaaagagtagtgatatttgaacaactatttgatacaacttttgtgacaactt 2117576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 3141677 - 3141630
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttg-tgacaactt 53  Q
    |||| |||||||||||||||||||||| |||||||||| |||||||||    
T  3141677 agtagtgatatttgaacaaccatttcatacaacttttgatgacaactt 3141630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 9403699 - 9403648
Alignment:
Q  2 aaaatagtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||| |||| |||||||| ||||||||||| | |||||||||||||||||||    
T  9403699 aaaagagtagtgatatttaaacaaccatttgatacaacttttgtgacaactt 9403648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 19127310 - 19127259
Alignment:
Q  2 aaaatagtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||| |||| |||||||||||||||||||| | |||||||||| ||||||||    
T  19127310 aaaagagtagtgatatttgaacaaccattttaaacaacttttgcgacaactt 19127259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 19522070 - 19522027
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  19522070 aatgatatttgaacaaccattttttacaacttttgtgacaactt 19522027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 28306199 - 28306156
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  28306199 aatgatatttgaacaaccattttttacaacttttgtgacaactt 28306156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 3634678 - 3634628
Alignment:
Q  4 aatagtaatgatatttgaacaaccatttcacacaacttttg-tgacaactt 53  Q
    ||||||| ||||||||||||||||||| || |||||||||| |||||||||    
T  3634678 aatagtagtgatatttgaacaaccattacatacaacttttgatgacaactt 3634628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 20719905 - 20719951
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||| ||||||||||||| |||||| | |||||||||||||||||||    
T  20719905 agtagtgatatttgaacatccatttgagacaacttttgtgacaactt 20719951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 24431508 - 24431554
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||| |||||||||||||||||||| | |||||| ||||||||||||    
T  24431508 agtagtgatatttgaacaaccatttgagacaactattgtgacaactt 24431554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 18660763 - 18660803
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaa 50  Q
    ||||||||||||||||||||||   ||||||||||||||||    
T  18660763 aatgatatttgaacaaccatttttgacaacttttgtgacaa 18660803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 42699230 - 42699194
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaactttt 43  Q
    |||||||||||||||||||| |||||| |||||||||    
T  42699230 agtaatgatatttgaacaactatttcatacaactttt 42699194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 50
Target Start/End: Complemental strand, 3286994 - 3286956
Alignment:
Q  12 tgatatttgaacaaccatttcacacaacttttgtgacaa 50  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3286994 tgatatttgaacaaccatttcacacaacttttgtgacaa 3286956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 1033329 - 1033283
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||| |||||||||||||||||||| | |||||||||||||||||||    
T  1033329 agtagtgatatttgaacaaccattttaaacaacttttgtgacaactt 1033283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 15596577 - 15596531
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||| |||||||||||||||||||| | |||||||||||||||||||    
T  15596577 agtagtgatatttgaacaaccattttaaacaacttttgtgacaactt 15596531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 51389492 - 51389451
Alignment:
Q  12 tgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||||||||||||||||||| | |||||||||||||||||||    
T  51389492 tgatatttgaacaaccatttgatacaacttttgtgacaactt 51389451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 1580172 - 1580219
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaac-ttttgtgacaactt 53  Q
    |||| |||||||||||||||||||||| ||||| ||||||||||||||    
T  1580172 agtagtgatatttgaacaaccatttcatacaactttttgtgacaactt 1580219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 5234361 - 5234404
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttgtgacaa 50  Q
    |||| |||||||||||||||||||| | ||||||||||||||||    
T  5234361 agtagtgatatttgaacaaccatttgatacaacttttgtgacaa 5234404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 5622462 - 5622505
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  5622462 aatgatatttgaacaaccattttttacaacttttgtgacaactt 5622505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 22257086 - 22257133
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaactttt-gtgacaactt 53  Q
    |||| |||||||||||||||||||||| ||||||||| ||||||||||    
T  22257086 agtagtgatatttgaacaaccatttcatacaacttttggtgacaactt 22257133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 23369399 - 23369356
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  23369399 aatgatatttgaacaaccattttttacaacttttgtgacaactt 23369356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 26732229 - 26732272
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||  ||||||||| ||||||||||    
T  26732229 aatgatatttgaacaaccatttttcacaactttagtgacaactt 26732272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 31240830 - 31240783
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaactttt-gtgacaactt 53  Q
    |||| |||||||||||||||||||||| ||||||||| ||||||||||    
T  31240830 agtagtgatatttgaacaaccatttcatacaacttttggtgacaactt 31240783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 31275327 - 31275284
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttgtgacaa 50  Q
    |||| |||||||||||||||||||| | ||||||||||||||||    
T  31275327 agtagtgatatttgaacaaccatttgatacaacttttgtgacaa 31275284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 36792514 - 36792467
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaactttt-gtgacaactt 53  Q
    |||| |||||||||||||||||||||| ||||||||| ||||||||||    
T  36792514 agtagtgatatttgaacaaccatttcatacaacttttggtgacaactt 36792467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 37997260 - 37997303
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  37997260 aatgatatttgaacaaccattttttacaacttttgtgacaactt 37997303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 38844380 - 38844427
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttgtgacaactta 54  Q
    ||||||| ||||||||||||||| | | ||||||||||||||||||||    
T  38844380 agtaatgttatttgaacaaccatatgagacaacttttgtgacaactta 38844427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 42915104 - 42915155
Alignment:
Q  2 aaaatagtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||| |||| ||||||||||||||| |||| | |||||||||||||||||||    
T  42915104 aaaagagtagtgatatttgaacaactatttgatacaacttttgtgacaactt 42915155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 46173718 - 46173675
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttgtgacaa 50  Q
    |||||||||||||||| |||||||| | ||||||||||||||||    
T  46173718 agtaatgatatttgaataaccatttgatacaacttttgtgacaa 46173675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 11063979 - 11064025
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||| |||||||||||||||||||| | |||||||| ||||||||||    
T  11063979 agtagtgatatttgaacaaccatttaagacaactttggtgacaactt 11064025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 30042314 - 30042268
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||||||||||||||||||| |||||| ||||||||| ||| |||||    
T  30042314 agtaatgatatttgaacaactatttcatacaacttttatgataactt 30042268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 25476808 - 25476759
Alignment:
Q  1 caaaatagtaatgatatttgaacaaccatttcacacaacttttgtgacaa 50  Q
    ||||| |||||||||||||||||| |||||| | ||||||| ||||||||    
T  25476808 caaaagagtaatgatatttgaacatccatttgagacaacttctgtgacaa 25476759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 40847545 - 40847504
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaac 51  Q
    |||||||||||||||||||||| ||||||| ||| |||||||    
T  40847545 aatgatatttgaacaaccatttgacacaacctttttgacaac 40847504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 2613506 - 2613550
Alignment:
Q  7 agtaatgatatttgaacaaccatttca-cacaacttttgtgacaa 50  Q
    ||||||||||||||||||||||||| |  ||||||||||||||||    
T  2613506 agtaatgatatttgaacaaccatttgataacaacttttgtgacaa 2613550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 31658094 - 31658054
Alignment:
Q  13 gatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||| | ||| |||||||||||||||    
T  31658094 gatatttgaacaaccatttgatacagcttttgtgacaactt 31658054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 37297053 - 37297093
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaa 50  Q
    ||||||||||||||||||||||   ||||||||||||||||    
T  37297053 aatgatatttgaacaaccattttttacaacttttgtgacaa 37297093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 51734700 - 51734656
Alignment:
Q  10 aatgatatttgaacaacca-tttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||    
T  51734700 aatgatatttgaacaaccacttttaaacaacttttgtgacaactt 51734656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000006; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 34474137 - 34474085
Alignment:
Q  2 aaaatagtaatgatatttgaacaaccatttcacacaactttt-gtgacaactt 53  Q
    |||| ||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  34474137 aaaagagtaatgatatttgaacaaccatttcatacaacttttggtgacaactt 34474085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 13971129 - 13971172
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||| |||||||| |||||||||||||||||||    
T  13971129 aatgatatttgaacatccatttcatacaacttttgtgacaactt 13971172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 32175137 - 32175090
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaactttt-gtgacaactt 53  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  32175137 agtaatgatatttgaacaaccatttcatacaacttttggtgacaactt 32175090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 21273600 - 21273646
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||| ||||||||||||||| |||||| |||||||||||||||||||    
T  21273600 agtagtgatatttgaacaactatttcatacaacttttgtgacaactt 21273646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 27325762 - 27325805
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  27325762 aatgatatttgaacaaccattttttacaacttttgtgacaactt 27325805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 38576586 - 38576543
Alignment:
Q  12 tgatatttgaacaaccatttcacacaactttt-gtgacaactta 54  Q
    |||||||||||||||||||||| ||||||||| |||||||||||    
T  38576586 tgatatttgaacaaccatttcaaacaacttttggtgacaactta 38576543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 45101577 - 45101530
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaactttt-gtgacaactt 53  Q
    |||| |||||||||||||||||||||| ||||||||| ||||||||||    
T  45101577 agtagtgatatttgaacaaccatttcatacaacttttggtgacaactt 45101530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 7678913 - 7678867
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||||||||||||||||||| |||| | ||||||||||| |||||||    
T  7678913 agtaatgatatttgaacaactatttgatacaacttttgtaacaactt 7678867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 10552976 - 10553022
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||| ||||||||||| | |||||||| ||||||||||    
T  10552976 agtaatgatatttaaacaaccattttagacaactttggtgacaactt 10553022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 23258213 - 23258167
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||| |||||||||||||||||||| | |||| ||||||||||||||    
T  23258213 agtagtgatatttgaacaaccatttgaaacaatttttgtgacaactt 23258167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 38128421 - 38128462
Alignment:
Q  12 tgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||||||||||||||||||| | |||| ||||||||||||||    
T  38128421 tgatatttgaacaaccattttaaacaatttttgtgacaactt 38128462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 22719444 - 22719484
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaa 50  Q
    ||||||||||||||||||||||   ||||||||||||||||    
T  22719444 aatgatatttgaacaaccattttttacaacttttgtgacaa 22719484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 31249591 - 31249551
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaa 50  Q
    ||||||||||||||||||||||   ||||||||||||||||    
T  31249591 aatgatatttgaacaaccattttttacaacttttgtgacaa 31249551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 33100536 - 33100492
Alignment:
Q  10 aatgatatttgaacaaccatttca-cacaacttttgtgacaactt 53  Q
    |||||||||||||||||||||| |  |||||||||||||||||||    
T  33100536 aatgatatttgaacaaccattttataacaacttttgtgacaactt 33100492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 11173636 - 11173585
Alignment:
Q  2 aaaatagtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||| |||||| |||||||||||||||||| | |||||||||||||||||||    
T  11173636 aaaagagtaataatatttgaacaaccatttgatacaacttttgtgacaactt 11173585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 46003888 - 46003841
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaactttt-gtgacaactt 53  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  46003888 agtaatgatatttgaacaaccatttcatacaacttttggtgacaactt 46003841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 20380779 - 20380825
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||| |||||||||||||||||||| | |||||||||||||||||||    
T  20380779 agtagtgatatttgaacaaccattttaaacaacttttgtgacaactt 20380825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 46473309 - 46473263
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||||| | ||||||||| |||||||||    
T  46473309 agtaatgatatttgaacaaccatttgatacaacttttatgacaactt 46473263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 7231896 - 7231939
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttgtgacaa 50  Q
    |||| |||||||||||||||||||| | ||||||||||||||||    
T  7231896 agtagtgatatttgaacaaccatttgatacaacttttgtgacaa 7231939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 26014816 - 26014859
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  26014816 aatgatatttgaacaaccattttttacaacttttgtgacaactt 26014859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 42357147 - 42357104
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  42357147 aatgatatttgaacaaccattttttacaacttttgtgacaactt 42357104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 43169644 - 43169691
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaactttt-gtgacaactt 53  Q
    |||| |||||||||||||||||||||| ||||||||| ||||||||||    
T  43169644 agtagtgatatttgaacaaccatttcatacaacttttggtgacaactt 43169691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 47
Target Start/End: Complemental strand, 44695188 - 44695153
Alignment:
Q  12 tgatatttgaacaaccatttcacacaacttttgtga 47  Q
    |||||||||||||||||||||| |||||||||||||    
T  44695188 tgatatttgaacaaccatttcatacaacttttgtga 44695153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 46623911 - 46623954
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  46623911 aatgatatttgaacaaccattttttacaacttttgtgacaactt 46623954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 47472333 - 47472376
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  47472333 aatgatatttgaacaaccattttttacaacttttgtgacaactt 47472376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 52939657 - 52939700
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  52939657 aatgatatttgaacaaccattttttacaacttttgtgacaactt 52939700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 29706084 - 29706038
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||| ||||||||||||||| |||| | |||||||||||||||||||    
T  29706084 agtagtgatatttgaacaactatttgatacaacttttgtgacaactt 29706038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 31249216 - 31249258
Alignment:
Q  12 tgatatttgaacaaccatttcacacaactttt-gtgacaactt 53  Q
    |||||||||||||||||||||| ||||||||| ||||||||||    
T  31249216 tgatatttgaacaaccatttcatacaacttttggtgacaactt 31249258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 51650533 - 51650491
Alignment:
Q  12 tgatatttgaacaaccatttcacacaactttt-gtgacaactt 53  Q
    |||||||||||||||||||||| ||||||||| ||||||||||    
T  51650533 tgatatttgaacaaccatttcatacaacttttggtgacaactt 51650491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 6126636 - 6126599
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttg 44  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  6126636 agtagtgatatttgaacaaccatttcatacaacttttg 6126599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 10811139 - 10811183
Alignment:
Q  10 aatgatatttgaacaaccatttca-cacaacttttgtgacaactt 53  Q
    |||||||||||||||||||||| |  |||||||||||||||||||    
T  10811139 aatgatatttgaacaaccattttatgacaacttttgtgacaactt 10811183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13735124 - 13735176
Alignment:
Q  1 caaaatagtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||||||| ||| ||||||||||||||||||   |||| ||||||||||||||    
T  13735124 caaaatagaaataatatttgaacaaccattttttacaatttttgtgacaactt 13735176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.00000000009; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 36133155 - 36133109
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||| ||||||||||||||| |||||| |||||||||||||||||||    
T  36133155 agtagtgatatttgaacaactatttcatacaacttttgtgacaactt 36133109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 12600224 - 12600183
Alignment:
Q  12 tgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||| |||||| |||||||||||||||||||    
T  12600224 tgatatttgaacaactatttcatacaacttttgtgacaactt 12600183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 2464315 - 2464272
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||| |||||| | |||||||||||||||||||    
T  2464315 aatgatatttgaacatccatttgatacaacttttgtgacaactt 2464272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 8848762 - 8848719
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  8848762 aatgatatttgaacaaccatttttgacaacttttgtgacaactt 8848719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 18254276 - 18254233
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  18254276 aatgatatttgaacaaccattttttacaacttttgtgacaactt 18254233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 27490797 - 27490754
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  27490797 aatgatatttgaacaaccatttttgacaacttttgtgacaactt 27490754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 41042258 - 41042301
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  41042258 aatgatatttgaacaaccatttttaacaacttttgtgacaactt 41042301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 45515494 - 45515536
Alignment:
Q  12 tgatatttgaacaaccatttcacacaactttt-gtgacaactt 53  Q
    |||||||||||||||||||||| ||||||||| ||||||||||    
T  45515494 tgatatttgaacaaccatttcatacaacttttggtgacaactt 45515536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 11164271 - 11164312
Alignment:
Q  12 tgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||| |||| | |||||||||||||||||||    
T  11164271 tgatatttgaacaactatttgatacaacttttgtgacaactt 11164312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 34138926 - 34138963
Alignment:
Q  7 agtaatgatatttgaacaaccatttcacacaacttttg 44  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  34138926 agtagtgatatttgaacaaccatttcatacaacttttg 34138963  T

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Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 43666746 - 43666702
Alignment:
Q  10 aatgatatttgaacaaccatttcac-acaacttttgtgacaactt 53  Q
    ||||||||||||||| |||||| || |||||||||||||||||||    
T  43666746 aatgatatttgaacatccatttaacgacaacttttgtgacaactt 43666702  T

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Target: chr6 (Bit Score: 32; Significance: 0.000000006; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 8098662 - 8098619
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  8098662 aatgatatttgaacaaccattttttacaacttttgtgacaactt 8098619  T

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Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 16336955 - 16337006
Alignment:
Q  2 aaaatagtaatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||| |||||||||||||||||| |||||| | |||||| ||||||||||||    
T  16336955 aaaagagtaatgatatttgaacatccatttgagacaactcttgtgacaactt 16337006  T

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Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 22079630 - 22079587
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  22079630 aatgatatttgaacaaccattttttacaacttttgtgacaactt 22079587  T

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Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 25811905 - 25811862
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  25811905 aatgatatttgaacaaccattttttacaacttttgtgacaactt 25811862  T

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Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 34047391 - 34047434
Alignment:
Q  10 aatgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  34047391 aatgatatttgaacaaccattttttacaacttttgtgacaactt 34047434  T

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Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 2241721 - 2241762
Alignment:
Q  12 tgatatttgaacaaccatttcacacaacttttgtgacaactt 53  Q
    |||||||||||||||||||| | ||||||||||||| |||||    
T  2241721 tgatatttgaacaaccatttgatacaacttttgtgataactt 2241762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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