View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4780_low_56 (Length: 259)
Name: NF4780_low_56
Description: NF4780
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4780_low_56 |
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Alignment Details
Target: chr5 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 9214170 - 9214397
Alignment:
| Q |
14 |
aatggattatcaatttgatctcttacaattacaacctattctatcaaacctcagtcgtttcgtttgattgatctaatggctaagagtattattatatctc |
113 |
Q |
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| T |
9214170 |
aatggattatcaatttgatctcttacaattacaacctattctatcaaacctcagtcgt-----ttgattgatctaatggctaagagtattattatatctc |
9214264 |
T |
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| Q |
114 |
ttagacttatgacaatcaacaataatttaacatagtgtttgagaattgaattagaacctgatccaactttgtacatataaggtatgttaattgcaccagg |
213 |
Q |
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| T |
9214265 |
ttagacttatgacaatcaacaataatttaacatagtgtttgagaattgaattagaacctgatccaactttgtacatataaggtatgttaattgcaccagg |
9214364 |
T |
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| Q |
214 |
agcgtgtccagcattaaactcttctgtgatcct |
246 |
Q |
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| T |
9214365 |
agcgtgtccagcattaaactcttccgtggtcct |
9214397 |
T |
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