View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4780_low_80 (Length: 233)
Name: NF4780_low_80
Description: NF4780
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4780_low_80 |
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Alignment Details
Target: chr7 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 26 - 203
Target Start/End: Complemental strand, 1112460 - 1112283
Alignment:
| Q |
26 |
atttgtttctcttcgctaagcggttaatgatttgaattgcgtatagagaaatttagttgaggagagaaaatccttagcttcacaatcctctatcactgtc |
125 |
Q |
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| T |
1112460 |
atttgcttctcttcgttaagcggttaagggtttgatttacatatagagaaatttagttgaggagggaaaatccttagcttcacaatcctctatccttgtc |
1112361 |
T |
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| Q |
126 |
ccacccgccccctcccgtattttattgaatgaatcttacacgagtcttccattttaaaaaaggagaatgttaaaccgt |
203 |
Q |
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| T |
1112360 |
ccaccaaccccctcccgtattttattgaatgaatcttacacgagtctcccattttaaaaaaggagaatgttaaaccgt |
1112283 |
T |
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