View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4785-Insertion-2 (Length: 855)

Name: NF4785-Insertion-2
Description: NF4785
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4785-Insertion-2
NF4785-Insertion-2
[»] chr5 (102 HSPs)
chr5 (8-775)||(18845523-18846302)
chr5 (258-666)||(18432202-18432625)
chr5 (177-481)||(2589300-2589601)
chr5 (468-753)||(2589008-2589288)
chr5 (411-549)||(12378798-12378936)
chr5 (152-548)||(2423047-2423449)
chr5 (465-598)||(34969501-34969633)
chr5 (411-673)||(34111493-34111748)
chr5 (411-591)||(38176196-38176376)
chr5 (411-591)||(38203420-38203600)
chr5 (153-415)||(41455250-41455518)
chr5 (460-673)||(6718698-6718910)
chr5 (411-545)||(34881035-34881170)
chr5 (238-355)||(25495532-25495647)
chr5 (245-336)||(23623460-23623551)
chr5 (151-501)||(6633580-6633951)
chr5 (601-754)||(14652485-14652635)
chr5 (429-753)||(27571792-27572094)
chr5 (257-338)||(691156-691237)
chr5 (411-548)||(40331198-40331334)
chr5 (486-673)||(26007159-26007345)
chr5 (409-673)||(7487031-7487291)
chr5 (411-516)||(40692718-40692823)
chr5 (153-356)||(40108990-40109190)
chr5 (411-541)||(10090467-10090596)
chr5 (288-350)||(22553802-22553863)
chr5 (460-602)||(22747341-22747482)
chr5 (235-348)||(33901524-33901636)
chr5 (235-400)||(4414613-4414778)
chr5 (601-673)||(11402704-11402775)
chr5 (205-316)||(28224360-28224469)
chr5 (411-506)||(40109335-40109431)
chr5 (424-587)||(36760293-36760456)
chr5 (687-753)||(20191963-20192028)
chr5 (235-312)||(33793108-33793185)
chr5 (203-338)||(36568162-36568295)
chr5 (245-313)||(40692915-40692983)
chr5 (411-489)||(7591195-7591273)
chr5 (454-548)||(14652688-14652782)
chr5 (257-338)||(6595388-6595464)
chr5 (235-316)||(42920099-42920180)
chr5 (411-495)||(2796539-2796623)
chr5 (411-495)||(2802700-2802784)
chr5 (526-602)||(7591399-7591475)
chr5 (552-624)||(20191797-20191869)
chr5 (553-668)||(35727068-35727183)
chr5 (235-314)||(2796355-2796434)
chr5 (235-314)||(2802516-2802595)
chr5 (148-313)||(23418439-23418603)
chr5 (466-548)||(11402827-11402909)
chr5 (303-353)||(34880912-34880961)
chr5 (235-316)||(22747121-22747202)
chr5 (712-753)||(32244384-32244425)
chr5 (279-332)||(38176081-38176134)
chr5 (279-332)||(38203305-38203358)
chr5 (540-668)||(2422914-2423040)
chr5 (250-334)||(19402694-19402777)
chr5 (424-484)||(25715544-25715604)
chr5 (411-499)||(39052835-39052923)
chr5 (607-662)||(691465-691519)
chr5 (411-506)||(4414493-4414588)
chr5 (431-541)||(25495327-25495437)
chr5 (235-298)||(42920568-42920631)
chr5 (493-564)||(42920818-42920889)
chr5 (691-753)||(6633353-6633414)
chr5 (235-313)||(11403068-11403145)
chr5 (715-753)||(17132101-17132139)
chr5 (284-338)||(39730709-39730763)
chr5 (245-350)||(40331019-40331122)
chr5 (612-662)||(41454990-41455039)
chr5 (597-662)||(6633440-6633504)
chr5 (235-308)||(6719049-6719122)
chr5 (235-336)||(25715699-25715800)
chr5 (235-308)||(26006911-26006983)
chr5 (411-512)||(26690074-26690175)
chr5 (411-512)||(26959806-26959907)
chr5 (552-593)||(34881190-34881231)
chr5 (424-516)||(36567976-36568069)
chr5 (298-355)||(38147551-38147607)
chr5 (552-668)||(12263977-12264091)
chr5 (238-313)||(34087834-34087910)
chr5 (721-753)||(40331507-40331539)
chr5 (276-312)||(42337417-42337453)
chr5 (459-549)||(563692-563783)
chr5 (475-546)||(691335-691406)
chr5 (607-662)||(6595103-6595157)
chr5 (154-193)||(9988414-9988453)
chr5 (686-753)||(36567755-36567816)
chr5 (687-753)||(41454897-41454967)
chr5 (576-673)||(563783-563877)
chr5 (238-316)||(733491-733569)
chr5 (235-313)||(1681670-1681748)
chr5 (152-186)||(6595538-6595572)
chr5 (239-337)||(8541856-8541954)
chr5 (152-210)||(9161530-9161588)
chr5 (235-273)||(26690307-26690345)
chr5 (235-273)||(26960039-26960077)
chr5 (715-753)||(35240835-35240873)
chr5 (636-673)||(733963-734000)
chr5 (285-338)||(27571655-27571707)
chr5 (424-481)||(31075350-31075407)
chr5 (151-188)||(38147721-38147758)
[»] chr6 (51 HSPs)
chr6 (153-668)||(8064605-8065129)
chr6 (235-668)||(17306473-17306914)
chr6 (411-673)||(14564543-14564791)
chr6 (248-673)||(19134646-19135080)
chr6 (411-661)||(28633060-28633310)
chr6 (475-673)||(4562966-4563163)
chr6 (411-591)||(32190399-32190580)
chr6 (411-592)||(892059-892240)
chr6 (518-673)||(30752646-30752801)
chr6 (424-661)||(13859111-13859346)
chr6 (518-662)||(12108381-12108524)
chr6 (235-313)||(6267474-6267552)
chr6 (235-316)||(9686521-9686602)
chr6 (460-664)||(4577206-4577408)
chr6 (414-548)||(13531994-13532128)
chr6 (414-548)||(20500790-20500924)
chr6 (411-530)||(29048793-29048913)
chr6 (530-673)||(7676181-7676323)
chr6 (235-338)||(13531801-13531899)
chr6 (411-606)||(14940289-14940484)
chr6 (411-489)||(12108295-12108374)
chr6 (235-353)||(14564863-14564976)
chr6 (245-308)||(29049016-29049079)
chr6 (250-351)||(891882-891982)
chr6 (292-408)||(24644538-24644654)
chr6 (411-500)||(30752848-30752937)
chr6 (245-313)||(12108124-12108192)
chr6 (203-338)||(14940074-14940207)
chr6 (245-313)||(30753040-30753108)
chr6 (687-753)||(7170076-7170146)
chr6 (614-673)||(13532194-13532251)
chr6 (303-353)||(13092438-13092487)
chr6 (239-313)||(13858935-13859009)
chr6 (596-662)||(20500677-20500742)
chr6 (411-541)||(6400059-6400192)
chr6 (267-323)||(20501035-20501091)
chr6 (152-316)||(23764766-23764933)
chr6 (430-541)||(31945172-31945283)
chr6 (606-662)||(31945337-31945392)
chr6 (686-749)||(9686095-9686152)
chr6 (250-353)||(31944996-31945098)
chr6 (694-753)||(31945420-31945478)
chr6 (707-753)||(13092028-13092074)
chr6 (152-186)||(19134556-19134590)
chr6 (251-313)||(22414281-22414343)
chr6 (552-602)||(24644823-24644873)
chr6 (612-662)||(29048241-29048290)
chr6 (715-752)||(11417090-11417127)
chr6 (687-768)||(24644942-24645016)
chr6 (270-351)||(28633965-28634045)
chr6 (235-292)||(32190262-32190319)
[»] chr7 (88 HSPs)
chr7 (144-668)||(27214625-27215162)
chr7 (414-749)||(26524655-26524986)
chr7 (152-673)||(524305-524844)
chr7 (153-662)||(40848977-40849503)
chr7 (411-664)||(26214821-26215070)
chr7 (235-753)||(46147249-46147763)
chr7 (411-666)||(21237487-21237745)
chr7 (310-624)||(2734491-2734809)
chr7 (429-666)||(23675492-23675726)
chr7 (415-662)||(23032800-23033043)
chr7 (235-355)||(31287301-31287420)
chr7 (238-673)||(43202541-43202960)
chr7 (203-350)||(29628658-29628802)
chr7 (235-666)||(11399240-11399680)
chr7 (170-352)||(26587665-26587850)
chr7 (486-665)||(20306720-20306899)
chr7 (245-338)||(7697752-7697845)
chr7 (235-316)||(27100132-27100213)
chr7 (235-316)||(27178090-27178171)
chr7 (435-544)||(49012283-49012392)
chr7 (503-602)||(27456515-27456614)
chr7 (235-413)||(26956221-26956390)
chr7 (235-548)||(30855325-30855651)
chr7 (310-461)||(26956159-26956326)
chr7 (411-564)||(35495621-35495773)
chr7 (492-668)||(47483732-47483907)
chr7 (267-338)||(8117838-8117909)
chr7 (458-592)||(29211415-29211549)
chr7 (512-673)||(29628212-29628370)
chr7 (250-353)||(10338073-10338180)
chr7 (424-548)||(37375557-37375681)
chr7 (411-541)||(11834180-11834310)
chr7 (151-310)||(29211065-29211227)
chr7 (235-353)||(22298972-22299089)
chr7 (411-549)||(23729601-23729738)
chr7 (460-673)||(33434226-33434429)
chr7 (483-592)||(47646521-47646630)
chr7 (601-673)||(30079490-30079561)
chr7 (460-548)||(48643017-48643105)
chr7 (250-353)||(8568088-8568190)
chr7 (415-548)||(8118001-8118134)
chr7 (245-323)||(37376235-37376313)
chr7 (250-415)||(27456704-27456866)
chr7 (153-350)||(31011203-31011398)
chr7 (454-673)||(6879856-6880073)
chr7 (239-351)||(19289557-19289668)
chr7 (634-753)||(37375357-37375472)
chr7 (686-753)||(23729421-23729487)
chr7 (411-506)||(30079292-30079387)
chr7 (415-545)||(17493110-17493238)
chr7 (415-545)||(17559976-17560104)
chr7 (691-752)||(10338799-10338859)
chr7 (252-413)||(26208834-26208992)
chr7 (153-338)||(30079034-30079218)
chr7 (250-353)||(22700880-22700981)
chr7 (440-544)||(22701082-22701185)
chr7 (687-753)||(8568533-8568603)
chr7 (713-752)||(20306645-20306684)
chr7 (305-415)||(20334969-20335081)
chr7 (425-475)||(26524596-26524646)
chr7 (715-753)||(35820098-35820136)
chr7 (252-353)||(1812921-1813016)
chr7 (460-545)||(32237899-32237984)
chr7 (305-338)||(38903281-38903314)
chr7 (596-668)||(2308002-2308073)
chr7 (597-673)||(4153620-4153695)
chr7 (686-753)||(7697317-7697388)
chr7 (250-313)||(32669706-32669770)
chr7 (200-313)||(11833963-11834075)
chr7 (629-664)||(23707051-23707086)
chr7 (540-603)||(32941937-32942000)
chr7 (687-753)||(40848884-40848954)
chr7 (551-602)||(41459339-41459390)
chr7 (250-312)||(16496857-16496919)
chr7 (552-602)||(16535617-16535667)
chr7 (552-602)||(16629995-16630045)
chr7 (552-586)||(31012925-31012959)
chr7 (715-753)||(32942090-32942128)
chr7 (433-529)||(8568293-8568390)
chr7 (433-529)||(10338545-10338642)
chr7 (552-601)||(16359326-16359375)
chr7 (724-753)||(16535763-16535792)
chr7 (724-753)||(16629870-16629899)
chr7 (601-662)||(20334700-20334760)
chr7 (707-752)||(22701323-22701368)
chr7 (712-753)||(34751021-34751062)
chr7 (269-338)||(36550920-36550989)
chr7 (688-753)||(43202462-43202525)
[»] chr1 (93 HSPs)
chr1 (411-673)||(10847243-10847504)
chr1 (283-676)||(8268748-8269156)
chr1 (245-673)||(35992132-35992573)
chr1 (245-673)||(35979819-35980250)
chr1 (246-664)||(36202983-36203400)
chr1 (411-602)||(17651922-17652112)
chr1 (454-651)||(29923069-29923264)
chr1 (234-602)||(17989220-17989599)
chr1 (411-602)||(50951754-50951945)
chr1 (411-753)||(17989080-17989411)
chr1 (427-661)||(32937798-32938044)
chr1 (407-673)||(24630071-24630337)
chr1 (411-602)||(52828984-52829175)
chr1 (250-415)||(18834100-18834267)
chr1 (433-601)||(25865752-25865918)
chr1 (235-353)||(27507036-27507153)
chr1 (424-673)||(32910099-32910341)
chr1 (414-548)||(8165262-8165395)
chr1 (235-351)||(17652166-17652286)
chr1 (235-316)||(35375641-35375722)
chr1 (415-548)||(44055963-44056096)
chr1 (424-592)||(382240-382407)
chr1 (415-664)||(25506981-25507240)
chr1 (235-353)||(12974009-12974128)
chr1 (415-548)||(11073090-11073223)
chr1 (245-350)||(39157843-39157947)
chr1 (235-400)||(6693632-6693793)
chr1 (431-535)||(9961921-9962025)
chr1 (245-329)||(45949069-45949153)
chr1 (203-353)||(25559516-25559658)
chr1 (204-313)||(9961744-9961851)
chr1 (235-313)||(23474646-23474723)
chr1 (152-313)||(26344501-26344660)
chr1 (560-666)||(47984361-47984466)
chr1 (424-540)||(11537033-11537152)
chr1 (411-544)||(18310175-18310307)
chr1 (578-666)||(15880029-15880116)
chr1 (238-314)||(25507346-25507421)
chr1 (552-668)||(39158176-39158291)
chr1 (254-338)||(44056189-44056273)
chr1 (250-353)||(6248515-6248612)
chr1 (411-516)||(6248334-6248440)
chr1 (245-400)||(18310359-18310515)
chr1 (411-524)||(19051374-19051488)
chr1 (554-666)||(15882008-15882119)
chr1 (251-338)||(10847072-10847154)
chr1 (235-318)||(16063282-16063365)
chr1 (687-753)||(26345037-26345107)
chr1 (285-351)||(27455551-27455615)
chr1 (568-663)||(36797905-36798000)
chr1 (152-338)||(11072808-11072998)
chr1 (409-542)||(23474817-23474951)
chr1 (552-602)||(25532881-25532931)
chr1 (237-353)||(25533256-25533368)
chr1 (411-524)||(26344764-26344878)
chr1 (411-548)||(52380450-52380587)
chr1 (235-308)||(16537362-16537435)
chr1 (245-338)||(32909904-32909997)
chr1 (687-747)||(50471266-50471325)
chr1 (264-351)||(382499-382585)
chr1 (411-541)||(25559735-25559865)
chr1 (250-353)||(26063752-26063853)
chr1 (150-301)||(36781648-36781802)
chr1 (235-313)||(3532542-3532620)
chr1 (310-416)||(9330774-9330882)
chr1 (411-544)||(34914365-34914498)
chr1 (287-353)||(52380308-52380373)
chr1 (235-313)||(52829269-52829346)
chr1 (688-753)||(3935490-3935554)
chr1 (200-312)||(3937231-3937341)
chr1 (152-193)||(15881642-15881683)
chr1 (411-544)||(21685269-21685401)
chr1 (629-673)||(11074324-11074368)
chr1 (612-668)||(23475021-23475075)
chr1 (409-473)||(41751524-41751588)
chr1 (601-660)||(6694274-6694332)
chr1 (629-668)||(17651871-17651910)
chr1 (715-754)||(21685553-21685592)
chr1 (425-540)||(35375404-35375519)
chr1 (251-314)||(50951556-50951619)
chr1 (235-293)||(8269167-8269225)
chr1 (155-193)||(8269257-8269295)
chr1 (315-353)||(15881799-15881836)
chr1 (245-295)||(24630440-24630490)
chr1 (287-337)||(33770188-33770238)
chr1 (719-753)||(50153442-50153476)
chr1 (634-668)||(50951968-50952002)
chr1 (152-186)||(51251906-51251940)
chr1 (601-662)||(26344954-26345014)
chr1 (715-752)||(27350693-27350730)
chr1 (601-662)||(34914248-34914308)
chr1 (715-752)||(35375210-35375247)
chr1 (552-593)||(39167136-39167177)
[»] scaffold0204 (3 HSPs)
scaffold0204 (235-753)||(25896-26419)
scaffold0204 (410-673)||(14631-14891)
scaffold0204 (235-316)||(14997-15077)
[»] chr4 (103 HSPs)
chr4 (235-753)||(48338374-48338897)
chr4 (235-595)||(36105994-36106370)
chr4 (235-673)||(32222836-32223288)
chr4 (235-592)||(46471612-46471974)
chr4 (409-662)||(4688797-4689049)
chr4 (250-579)||(25686025-25686344)
chr4 (475-633)||(7764210-7764368)
chr4 (460-634)||(18881805-18881979)
chr4 (235-541)||(21069293-21069616)
chr4 (411-536)||(45226614-45226739)
chr4 (415-548)||(5122101-5122234)
chr4 (152-510)||(18536096-18536475)
chr4 (468-673)||(51907177-51907377)
chr4 (452-662)||(17845008-17845217)
chr4 (411-544)||(6102121-6102254)
chr4 (424-581)||(35233025-35233183)
chr4 (235-351)||(48292954-48293069)
chr4 (235-353)||(8485120-8485237)
chr4 (235-353)||(20986841-20986958)
chr4 (235-352)||(23449509-23449625)
chr4 (235-352)||(28148207-28148323)
chr4 (540-673)||(48293252-48293383)
chr4 (251-360)||(41260542-41260652)
chr4 (528-662)||(29700844-29700967)
chr4 (454-548)||(3666828-3666922)
chr4 (235-337)||(3999211-3999313)
chr4 (238-351)||(27743779-27743890)
chr4 (526-655)||(40494547-40494674)
chr4 (411-673)||(49640951-49641199)
chr4 (475-623)||(7784322-7784464)
chr4 (200-400)||(45464548-45464752)
chr4 (253-353)||(41325837-41325936)
chr4 (411-541)||(8484910-8485040)
chr4 (203-353)||(48653398-48653546)
chr4 (286-545)||(1920158-1920426)
chr4 (257-338)||(45983787-45983868)
chr4 (245-353)||(23625449-23625551)
chr4 (411-522)||(27743455-27743567)
chr4 (407-593)||(11031343-11031537)
chr4 (687-754)||(18319550-18319616)
chr4 (687-754)||(18399065-18399131)
chr4 (152-353)||(1564494-1564703)
chr4 (411-540)||(1564781-1564910)
chr4 (152-334)||(35014732-35014918)
chr4 (707-753)||(36106422-36106468)
chr4 (570-668)||(48684894-48684991)
chr4 (475-548)||(15724122-15724195)
chr4 (540-673)||(18536480-18536611)
chr4 (686-754)||(18396361-18396428)
chr4 (245-313)||(41312216-41312284)
chr4 (250-314)||(49641303-49641367)
chr4 (245-332)||(5121925-5122007)
chr4 (601-668)||(8312003-8312069)
chr4 (411-530)||(13714964-13715081)
chr4 (245-312)||(18399495-18399562)
chr4 (235-338)||(18881577-18881680)
chr4 (429-512)||(48293161-48293244)
chr4 (411-506)||(48602226-48602321)
chr4 (411-548)||(4642676-4642813)
chr4 (152-214)||(15985996-15986058)
chr4 (411-532)||(35014519-35014641)
chr4 (430-544)||(53934882-53934995)
chr4 (244-313)||(3666612-3666681)
chr4 (257-338)||(15724294-15724370)
chr4 (245-337)||(53935101-53935193)
chr4 (456-543)||(54273785-54273873)
chr4 (245-316)||(18319115-18319186)
chr4 (245-316)||(18396803-18396874)
chr4 (235-338)||(40494867-40494968)
chr4 (250-313)||(54273473-54273536)
chr4 (160-350)||(23119751-23119940)
chr4 (482-548)||(23120033-23120099)
chr4 (607-673)||(23120159-23120224)
chr4 (597-662)||(45983500-45983565)
chr4 (475-544)||(48653630-48653700)
chr4 (612-673)||(6101993-6102053)
chr4 (433-541)||(23625637-23625745)
chr4 (629-673)||(5122311-5122355)
chr4 (713-753)||(5122393-5122433)
chr4 (267-311)||(12916850-12916894)
chr4 (431-499)||(42199069-42199137)
chr4 (235-339)||(45226796-45226900)
chr4 (476-548)||(45983614-45983686)
chr4 (687-753)||(21069079-21069149)
chr4 (411-525)||(28148017-28148132)
chr4 (266-313)||(48685224-48685271)
chr4 (607-673)||(15723997-15724062)
chr4 (245-306)||(17845345-17845411)
chr4 (715-753)||(19753532-19753570)
chr4 (715-753)||(19786236-19786274)
chr4 (687-752)||(23625880-23625949)
chr4 (707-753)||(28147813-28147859)
chr4 (687-753)||(29232786-29232846)
chr4 (552-602)||(29232912-29232962)
chr4 (235-353)||(29233191-29233303)
chr4 (707-753)||(42198817-42198863)
chr4 (707-756)||(6101913-6101962)
chr4 (284-313)||(13715184-13715213)
chr4 (616-673)||(26674224-26674280)
chr4 (552-593)||(45226548-45226589)
chr4 (707-748)||(45578047-45578088)
chr4 (688-753)||(48293395-48293454)
chr4 (415-512)||(48685016-48685113)
[»] chr2 (62 HSPs)
chr2 (152-753)||(13193932-13194548)
chr2 (424-753)||(17762775-17763100)
chr2 (235-654)||(36500150-36500590)
chr2 (415-673)||(1331115-1331356)
chr2 (412-673)||(27301209-27301457)
chr2 (235-667)||(12041125-12041562)
chr2 (211-668)||(31719579-31720046)
chr2 (411-664)||(22014085-22014327)
chr2 (152-338)||(5862108-5862292)
chr2 (411-753)||(28790539-28790877)
chr2 (418-662)||(30759356-30759599)
chr2 (239-351)||(41166598-41166709)
chr2 (466-661)||(11650962-11651155)
chr2 (433-544)||(11377398-11377509)
chr2 (460-593)||(27962438-27962569)
chr2 (475-662)||(30761528-30761714)
chr2 (414-546)||(36964216-36964350)
chr2 (411-516)||(15320306-15320412)
chr2 (155-312)||(27300942-27301103)
chr2 (540-673)||(6946403-6946523)
chr2 (424-602)||(11051136-11051314)
chr2 (250-353)||(12884815-12884917)
chr2 (408-547)||(30514656-30514793)
chr2 (433-548)||(44085717-44085832)
chr2 (687-753)||(41461115-41461180)
chr2 (260-338)||(44085945-44086023)
chr2 (235-316)||(11678457-11678538)
chr2 (235-351)||(1331435-1331545)
chr2 (523-602)||(24725637-24725715)
chr2 (411-489)||(41166443-41166521)
chr2 (469-602)||(21734276-21734408)
chr2 (267-338)||(12841798-12841869)
chr2 (235-302)||(30759183-30759250)
chr2 (411-541)||(43452364-43452489)
chr2 (235-316)||(11377186-11377267)
chr2 (235-316)||(11695935-11696016)
chr2 (235-300)||(15320124-15320189)
chr2 (310-350)||(21734223-21734263)
chr2 (257-312)||(10242306-10242361)
chr2 (250-297)||(17763190-17763237)
chr2 (411-473)||(5862374-5862436)
chr2 (614-667)||(11377567-11377621)
chr2 (698-752)||(20985896-20985949)
chr2 (707-753)||(27301487-27301533)
chr2 (250-312)||(29172159-29172221)
chr2 (619-673)||(36964133-36964187)
chr2 (612-666)||(44085601-44085653)
chr2 (552-673)||(21480659-21480782)
chr2 (687-753)||(5862610-5862680)
chr2 (687-753)||(12041579-12041638)
chr2 (235-338)||(36965537-36965634)
chr2 (688-753)||(11678030-11678092)
chr2 (688-753)||(11695508-11695570)
chr2 (152-186)||(11696071-11696105)
chr2 (687-753)||(30761740-30761805)
chr2 (686-752)||(36500620-36500685)
chr2 (597-662)||(11678114-11678178)
chr2 (597-662)||(11695592-11695656)
chr2 (552-593)||(15320464-15320505)
chr2 (151-208)||(18360351-18360408)
chr2 (236-309)||(43452592-43452664)
chr2 (254-331)||(44741653-44741730)
[»] chr3 (81 HSPs)
chr3 (411-753)||(2832101-2832443)
chr3 (153-316)||(52632604-52632765)
chr3 (245-544)||(42362753-42363066)
chr3 (305-582)||(38681418-38681704)
chr3 (411-569)||(20846683-20846841)
chr3 (415-668)||(17144452-17144693)
chr3 (411-548)||(44662163-44662303)
chr3 (235-357)||(51661896-51662017)
chr3 (200-338)||(10481105-10481246)
chr3 (454-592)||(52632211-52632349)
chr3 (412-544)||(21562788-21562918)
chr3 (235-351)||(10744586-10744700)
chr3 (418-672)||(37045420-37045669)
chr3 (411-545)||(36330391-36330525)
chr3 (257-339)||(38651586-38651668)
chr3 (235-353)||(46252969-46253086)
chr3 (687-753)||(55467626-55467691)
chr3 (235-338)||(4280748-4280850)
chr3 (235-338)||(5640249-5640352)
chr3 (250-352)||(2565840-2565941)
chr3 (411-525)||(22472780-22472894)
chr3 (414-548)||(44651193-44651326)
chr3 (475-604)||(5695715-5695844)
chr3 (152-416)||(55467074-55467349)
chr3 (153-415)||(26758606-26758868)
chr3 (431-548)||(22256034-22256151)
chr3 (423-544)||(4668965-4669086)
chr3 (612-673)||(8557866-8557926)
chr3 (237-338)||(25918779-25918880)
chr3 (152-312)||(17144180-17144344)
chr3 (152-313)||(44651433-44651589)
chr3 (250-350)||(51194691-51194790)
chr3 (409-548)||(5640441-5640580)
chr3 (411-538)||(27054319-27054445)
chr3 (151-338)||(50578434-50578624)
chr3 (411-548)||(10481333-10481473)
chr3 (235-353)||(22255822-22255938)
chr3 (251-309)||(45629662-45629720)
chr3 (238-316)||(48169145-48169223)
chr3 (235-337)||(55130162-55130264)
chr3 (415-544)||(4280521-4280650)
chr3 (257-338)||(4555075-4555156)
chr3 (454-523)||(50578757-50578826)
chr3 (273-337)||(44662375-44662438)
chr3 (219-338)||(51660516-51660628)
chr3 (210-349)||(22472559-22472701)
chr3 (415-540)||(25918972-25919097)
chr3 (707-753)||(45629226-45629272)
chr3 (687-753)||(20846505-20846574)
chr3 (612-673)||(25465911-25465971)
chr3 (235-308)||(45914740-45914813)
chr3 (250-353)||(8355771-8355872)
chr3 (552-673)||(22472935-22473058)
chr3 (554-673)||(55129833-55129951)
chr3 (634-668)||(5640662-5640696)
chr3 (634-668)||(5671937-5671971)
chr3 (634-668)||(5681434-5681468)
chr3 (714-752)||(25465834-25465872)
chr3 (607-673)||(42363129-42363194)
chr3 (411-504)||(45629465-45629559)
chr3 (715-753)||(54122054-54122092)
chr3 (239-308)||(34185425-34185494)
chr3 (475-548)||(38651767-38651840)
chr3 (597-662)||(45629310-45629374)
chr3 (153-202)||(45629771-45629820)
chr3 (257-313)||(8557323-8557379)
chr3 (629-673)||(30739555-30739599)
chr3 (411-541)||(2566048-2566178)
chr3 (254-313)||(4670043-4670102)
chr3 (456-546)||(21238268-21238359)
chr3 (694-753)||(27054108-27054166)
chr3 (687-746)||(37045349-37045407)
chr3 (707-754)||(38680838-38680885)
chr3 (635-753)||(50578937-50579051)
chr3 (152-186)||(4555221-4555255)
chr3 (552-602)||(45915075-45915125)
chr3 (153-203)||(54122893-54122943)
chr3 (252-313)||(4764168-4764229)
chr3 (552-593)||(25465978-25466019)
chr3 (601-662)||(48167385-48167445)
chr3 (424-522)||(55467369-55467469)
[»] chr8 (54 HSPs)
chr8 (411-673)||(15452382-15452643)
chr8 (235-534)||(9012363-9012674)
chr8 (414-548)||(40436667-40436801)
chr8 (207-532)||(28441715-28442053)
chr8 (424-660)||(41346016-41346264)
chr8 (235-355)||(26774860-26774980)
chr8 (454-662)||(38926192-38926392)
chr8 (509-667)||(14185686-14185840)
chr8 (152-353)||(22810625-22810829)
chr8 (235-541)||(24681611-24681934)
chr8 (574-665)||(3129439-3129529)
chr8 (413-512)||(28801836-28801935)
chr8 (571-673)||(12074060-12074161)
chr8 (526-624)||(44336924-44337022)
chr8 (687-752)||(9012821-9012885)
chr8 (688-753)||(19539411-19539475)
chr8 (254-338)||(12659813-12659897)
chr8 (454-536)||(12073976-12074058)
chr8 (250-327)||(30252639-30252716)
chr8 (235-332)||(44334570-44334667)
chr8 (235-323)||(11219436-11219524)
chr8 (475-591)||(33566128-33566243)
chr8 (245-316)||(8036062-8036133)
chr8 (250-313)||(13325773-13325836)
chr8 (411-469)||(3129365-3129423)
chr8 (511-593)||(6591407-6591489)
chr8 (566-668)||(28801728-28801829)
chr8 (153-311)||(40436910-40437072)
chr8 (411-484)||(44337042-44337114)
chr8 (293-353)||(1271575-1271634)
chr8 (613-673)||(6617037-6617096)
chr8 (415-483)||(27674814-27674882)
chr8 (431-541)||(13325537-13325647)
chr8 (419-541)||(22810915-22811036)
chr8 (634-673)||(28073129-28073168)
chr8 (257-316)||(31477759-31477818)
chr8 (431-540)||(11219193-11219302)
chr8 (251-313)||(15452210-15452272)
chr8 (251-313)||(35687879-35687941)
chr8 (715-753)||(36340771-36340809)
chr8 (687-753)||(40436470-40436535)
chr8 (251-312)||(28072679-28072740)
chr8 (309-353)||(3155622-3155665)
chr8 (600-664)||(4785355-4785418)
chr8 (245-313)||(4785700-4785768)
chr8 (613-673)||(6591342-6591401)
chr8 (153-193)||(14549789-14549829)
chr8 (456-496)||(32063900-32063940)
chr8 (687-753)||(33565990-33566060)
chr8 (411-529)||(37162367-37162485)
chr8 (715-753)||(44336806-44336844)
chr8 (691-752)||(12193451-12193506)
chr8 (691-752)||(12437879-12437934)
chr8 (612-673)||(15272213-15272274)
[»] scaffold0688 (4 HSPs)
scaffold0688 (552-668)||(1278-1392)
scaffold0688 (552-668)||(7847-7961)
scaffold0688 (265-350)||(1623-1707)
scaffold0688 (284-350)||(3216-3281)
[»] scaffold0001 (1 HSPs)
scaffold0001 (237-549)||(427874-428200)
[»] scaffold0210 (2 HSPs)
scaffold0210 (250-321)||(18938-19009)
scaffold0210 (250-321)||(26830-26901)
[»] scaffold0470 (1 HSPs)
scaffold0470 (613-673)||(6355-6414)
[»] scaffold0015 (1 HSPs)
scaffold0015 (715-753)||(62433-62471)
[»] scaffold0664 (1 HSPs)
scaffold0664 (299-415)||(6358-6476)


Alignment Details
Target: chr5 (Bit Score: 520; Significance: 0; HSPs: 102)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 520; E-Value: 0
Query Start/End: Original strand, 8 - 775
Target Start/End: Complemental strand, 18846302 - 18845523
Alignment:
Q  8 ccaacaaaataattgaagatccgccactgtgcatatgtccacgggcggacctcaacaggtcatggtgtgacaagtgccacaccttgccacaccaccccca 107  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18846302 ccaacaaaataattgaagatccgccattgtgcatatgtccaagggcggacctcaacaggtcatggtgtgtcaagtgccacaccttgccacaccaccccca 18846203  T
Q  108 agttgannnnnnnnc-tcccacaagcccaaaagtttaaaacactagggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatcgaa 206  Q
    ||||||        | ||||| || ||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||    
T  18846202 agttgattttttttcctcccataaacccaaaagtctaaaacaatagggtgtttaaaatcgaaccaatctaatagaaaaatcgtaaactgaatcaatcgaa 18846103  T
Q  207 actgcaaaaagctgtatttggtttcgatatgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaa 306  Q
    ||||||||||||||||||| |||| | |||||||||  |||||||||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||    
T  18846102 actgcaaaaagctgtatttagtttgggtatgtattcgtatcacttttttactcaaccatatggtttggtttaatttacggtttttattttaccaaccaaa 18846003  T
Q  307 ccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaatatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaatgacat 406  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  18846002 caaaaccaaatcaaaccgcaacataagaaaaaacactaattaaatatgtcatctacgccaatacttgtaaaaacccaatgaaaactttcataaatgacat 18845903  T
Q  407 atattttctt--------------ctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttcca 492  Q
    ||||||||||              ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  18845902 atattttcttttgttaaatttcttctttgccttttattttaaaaatgtatttatatgcaatttgaacttttaaagaattatgaaatcttagtcttttaca 18845803  T
Q  493 tttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattg 592  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18845802 tttcttacaaaatagaattactttatgtccacatttttaatttgatctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattg 18845703  T
Q  593 tcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtctggtnnnnnnnnntgcacca 692  Q
    ||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||         |||||||    
T  18845702 tcggaaacattgctagaattatgttgtgttttggcttttt-aacttgattttaatgttggaaacaaaaaattgtatcgtctggt-aaaaaaaatgcacca 18845605  T
Q  693 accgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaactaatcataaccaaacaacatgc 775  Q
    |||||||||| || |||||||| ||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  18845604 accgatccaa-cccaaaccgcagtggtttggtttggttcagattttattttaaaactcaactaatcataaccaaacaacatgc 18845523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 258 - 666
Target Start/End: Complemental strand, 18432625 - 18432202
Alignment:
Q  258 tcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaat--atgt 355  Q
    |||||||||| ||||| |||| ||| |||||||||||||| ||||| ||||||| |||| ||||||||||||||| |||||||| ||||||| |  ||||    
T  18432625 tcaaccgcatagtttggtttggtttgcggtttttattttatcaaccgaaccaaatcaaaccaaaccgcaacataa-aaaaaacattaattaagtctatgt 18432527  T
Q  356 catctgcgccaatactcgtaaaaacccaatgaaaactttcataaa-tgacatatattttc--------------ttctttgccttttatttcaaaaatgt 440  Q
    || ||   ||||||||| || |||  ||||||||||||| ||||| |||||||| |||||              |||||||| ||||||||||||||| |    
T  18432526 cacctataccaatactcatagaaaatcaatgaaaacttttataaaatgacatattttttcccacgttaagttttttctttgctttttatttcaaaaatat 18432427  T
Q  441 atttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtct 540  Q
    | |||| ||| | ||||||||||| |||||||| || ||||||||||||  |||||||||| |||||||||||||| ||||||  ||||||||||||| |    
T  18432426 agttatgtgctacttgaacttttagagaatgataaagtcttagtcttttatatttcttacataatagaattactttttgtccatttttttaatttggttt 18432327  T
Q  541 atgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttga 640  Q
    ||||||||| |||||||||||||| ||| || |||||||| ||||||||||||| ||||||||| | ||| |||||||||||||  |||||| |||| ||    
T  18432326 atgttgtttggtgaaaatgaaattgtaacgtgggatgaaagtaaaaacattgtcagaaatattgttgaaaatatgttgtgttttaccttttt-aactcga 18432228  T
Q  641 ttttaatgttggaaacaaaaaattgt 666  Q
    ||||||||| | ||||||||||||||    
T  18432227 ttttaatgtcgaaaacaaaaaattgt 18432202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 177 - 481
Target Start/End: Complemental strand, 2589601 - 2589300
Alignment:
Q  177 atagaaaaactgtaaactgaatcaatcgaaactgcaaaaagctgtatttggtttcgatatgtattcaaatcacttttttactcaaccgcatggtttgatt 276  Q
    |||||||||| | |||||||||||| |||||||||||||| ||| |||||||||  ||     |||||||||||||||||||| ||||||||||||| ||    
T  2589601 atagaaaaaccgcaaactgaatcaaccgaaactgcaaaaaactgcatttggtttgaat-----ttcaaatcacttttttactctaccgcatggtttggtt 2589507  T
Q  277 tgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaatat--gtcatctgcgccaatactcgt 374  Q
     | ||| | |||||||||||||||||  |||| ||     |||||||||||||||||||||| ||||||||||||||  ||||||| ||||||||||| |    
T  2589506 cggtttccagtttttattttaccaactgaaccgaa-----tcaaaccgcaacataagaaaaa-cactaattaaatatatgtcatctacgccaatactcat 2589413  T
Q  375 aaaaacccaatgaaaactttcataaatgacatatattttcttct------ttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaaga 468  Q
    | ||||  |||| ||||||| ||||||||||||||||||||| |      |||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  2589412 agaaactaaatggaaacttttataaatgacatatattttcttttgttaagttgctttttatttcaaaaatgtatttatgtgcaatttgaacttttaaaga 2589313  T
Q  469 atgatgaaatctt 481  Q
    ||||| |||||||    
T  2589312 atgataaaatctt 2589300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 468 - 753
Target Start/End: Complemental strand, 2589288 - 2589008
Alignment:
Q  468 aatgatgaaatcttagtcttttccatttcttacaaaatagaattactttct-gtccacatttttaatttggtctatgttgtttagtgaaaatgaaatttt 566  Q
    |||||| |||||||| |||||| ||||||||||| |||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||    
T  2589288 aatgataaaatcttaatcttttacatttcttacataatagaattacttttttgtccacatttttaatttggtatatgttgtttagtgaaaatgaaatttt 2589189  T
Q  567 aatgttggatgaaattaaaaa-cattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattg 665  Q
    ||||||| ||||||||||||| |||||||||||| ||||| | || |||||||||||||  |||||| |||||||||||||  |||||||||||||||||    
T  2589188 aatgttgtatgaaattaaaaaccattgtcggaaacattgccagaagtatgttgtgttttaacttttt-aacttgattttaaaattggaaacaaaaaattg 2589090  T
Q  666 tatcgtctggtnnnnnnnnntgcaccaaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    ||| |||| ||          |||||||||||||||| || ||||||||     | |||||||||| || ||||||||||||||||||    
T  2589089 tattgtctagtaaaaaaaaccgcaccaaccgatccaa-cccaaaccgca-----tcgatttggttctgaatttattttaaaagtcaac 2589008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 411 - 549
Target Start/End: Original strand, 12378798 - 12378936
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    |||||||||||| ||||||||||||||||||||||| ||| | || ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||    
T  12378798 tttcttctttgctttttatttcaaaaatgtatttatgtgctacttaaacttttaaagaatgataaaatcttagtattttacatttcttacaaaatagaat 12378897  T
Q  511 tactttctgtccacatttttaatttggtctatgttgttt 549  Q
    || ||| ||||||||||||||||||||| ||||||||||    
T  12378898 taatttttgtccacatttttaatttggtttatgttgttt 12378936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 152 - 548
Target Start/End: Complemental strand, 2423449 - 2423047
Alignment:
Q  152 gggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaa------tcgaaactgcaaaaagctgtatttggtttcgatatgtattcaaa 245  Q
    ||||||| |||| ||||||||||||||||||||| || ||||||||||||      |||||||  |||||| | | |||| |||| |||  |||||   |    
T  2423449 gggtgttcaaaagcgaaccaatccaatagaaaaattgcaaactgaatcaacccaaatcgaaaccacaaaaaaccgcattttgtttggat--gtattttga 2423352  T
Q  246 tcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaa 345  Q
    |||||||||  ||||||| ||||||||| |||||||| ||||||| |||||||||||| ||||||||     |||||||||||||||| ||||||| |||    
T  2423351 tcactttttccctcaaccacatggtttggtttgatttgcggttttcattttaccaaccgaaccaaac-----caaaccgcaacataag-aaaaacattaa 2423258  T
Q  346 ttaaa--tatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaatgacatatattttc-------------ttctttgccttttatt 430  Q
    |||||  ||||||| ||   | ||||||| ||||||| ||||  ||||||| |||||||||||||||||||             || ||||| |||  ||    
T  2423257 ttaaatctatgtcacctagacaaatactcataaaaactcaatagaaacttttataaatgacatatattttctcttgttaaatttttatttgcttttcttt 2423158  T
Q  431 tcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacattttt 530  Q
    ||||||||||||||       |||| |||||||| ||||| || |||||||||| || | ||||||||||| |||| ||||||||| | ||||| |||||    
T  2423157 tcaaaaatgtattt-------atttaaacttttagagaataataaaatcttagttttctacatttcttacataatataattactttttatccacgttttt 2423065  T
Q  531 aatttggtctatgttgtt 548  Q
    |||||||  |||||||||    
T  2423064 aatttggcttatgttgtt 2423047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 465 - 598
Target Start/End: Complemental strand, 34969633 - 34969501
Alignment:
Q  465 aagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaatt 564  Q
    |||||||||||||||||||||||||  |||| ||||| |||| |||||||||   ||||||||||||||||| |||||||||||||||||||||||||||    
T  34969633 aagaatgatgaaatcttagtcttttatattt-ttacataatataattacttttcatccacatttttaatttgatctatgttgtttagtgaaaatgaaatt 34969535  T
Q  565 ttaatgttggatgaaattaaaaacattgtcggaa 598  Q
    ||||| || ||||||||| |||| ||||| ||||    
T  34969534 ttaatatttgatgaaatttaaaagattgttggaa 34969501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 411 - 673
Target Start/End: Original strand, 34111493 - 34111748
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    |||||||||||| |||||||||||||||||| |        | ||||||||||| |||| ||| ||||||| ||||||| ||||||||||| ||||  ||    
T  34111493 tttcttctttgctttttatttcaaaaatgtaat--------acttgaacttttagagaaggataaaatctttgtcttttacatttcttacataatatgat 34111584  T
Q  511 tactttctgtccacatttt--taatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaa 608  Q
    |||||| ||||||| ||||  |||||||||||||||||||| ||||||||||||||  ||| ||||||||| |  |||| ||||| | ||| ||||||      
T  34111585 tactttttgtccacgtttttttaatttggtctatgttgtttggtgaaaatgaaattgcaatattggatgaagtataaaatattgttgaaaacattgctgg 34111684  T
Q  609 aattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    || ||||||| || ||  |||||| || |||||||| || ||  |||||||||||||||| ||||    
T  34111685 aaatatgttgcgtgttaccttttt-aatttgattttgatattaaaaacaaaaaattgtattgtct 34111748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 411 - 591
Target Start/End: Original strand, 38176196 - 38176376
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    |||||||||| | ||| |||| |||||||||||||  ||| ||||||| ||||| |||| ||| |||| ||| |||||| ||||| ||||| ||||| ||    
T  38176196 tttcttcttttcttttcatttaaaaaatgtatttaattgctatttgaaattttatagaaagataaaatattactcttttacattttttacataataggat 38176295  T
Q  511 tactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacatt 591  Q
    |||||| ||||||| |||| ||||| |||||| ||||||||| | ||| ||||| ||||||||| ||||||| ||||||||    
T  38176296 tactttttgtccacgttttaaatttcgtctatattgtttagttacaataaaattgtaatgttggttgaaatttaaaacatt 38176376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 411 - 591
Target Start/End: Original strand, 38203420 - 38203600
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    |||||||||| | ||| |||| |||||||||||||  ||| ||||||| ||||| |||| ||| |||| ||| |||||| ||||| ||||| ||||| ||    
T  38203420 tttcttcttttcttttcatttaaaaaatgtatttaattgctatttgaaattttatagaaagataaaatattactcttttacattttttacataataggat 38203519  T
Q  511 tactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacatt 591  Q
    |||||| ||||||| |||| ||||| |||||| ||||||||| | ||| ||||| ||||||||| ||||||| ||||||||    
T  38203520 tactttttgtccacgttttaaatttcgtctatattgtttagttacaataaaattgtaatgttggttgaaatttaaaacatt 38203600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 153 - 415
Target Start/End: Complemental strand, 41455518 - 41455250
Alignment:
Q  153 ggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatc------gaaactgcaaaaagctgtatttggtttcgatatgtattcaaat 246  Q
    |||||| |||| |||||||||| ||||||||||| | || ||||| |||||      |||||||||||||   | ||||||||  |||  ||||||  ||    
T  41455518 ggtgttcaaaaccgaaccaatcaaatagaaaaaccgcaacctgaaccaatccaaaccgaaactgcaaaaaatcgcatttggttcggat--gtattctgat 41455421  T
Q  247 cacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaat 346  Q
    || |||||||||||||| ||||||||| || ||||| ||||| | |||||||||||| |||||||||||||| |||||||| ||||| ||||||||||||    
T  41455420 caattttttactcaaccacatggtttggttcgatttgcggttatgattttaccaaccgaaccaaaccaaatcgaaccgcaatataag-aaaaacactaat 41455322  T
Q  347 taa--atatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcat-aaatgacatatattttct 415  Q
    |||  |||| |||  ||  ||||||||| || |||| ||||| ||||||| || ||||||||||| ||||||    
T  41455321 taaatatatatcacttggaccaatactcatagaaactcaatggaaactttaataaaatgacatattttttct 41455250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 460 - 673
Target Start/End: Complemental strand, 6718910 - 6718698
Alignment:
Q  460 ttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtttagtgaaaatg 559  Q
    ||||| |||||||| |||||||||| |||| ||||||||| | |||||||||| ||| ||| ||| ||||||||||    ||| || ||| ||||||||     
T  6718910 ttttatagaatgataaaatcttagtgttttacatttcttatataatagaattaatttatgttcacgtttttaatttctcttatattatttggtgaaaata 6718811  T
Q  560 aaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaa 659  Q
    ||||| ||||||||||||||||| |||| ||||| | ||| |||||| ||| ||| ||||||| | ||||||| ||||  ||||||| |||  |||||||    
T  6718810 aaattgtaatgttggatgaaatttaaaatattgttgaaaacattgctgaaaatatattgtgttatagcttttt-aactcaattttaacgttaaaaacaaa 6718712  T
Q  660 aaattgtatcgtct 673  Q
    ||||||||| ||||    
T  6718711 aaattgtattgtct 6718698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 411 - 545
Target Start/End: Original strand, 34881035 - 34881170
Alignment:
Q  411 tttcttctttgcctttt-atttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaa 509  Q
    |||||||||||| |||| ||||||||| | ||||||| ||| | ||||| ||||| |||||||| |||||||||| |||| ||||||||||||||||  |    
T  34881035 tttcttctttgcttttttatttcaaaagtatatttatgtgccacttgaatttttagagaatgataaaatcttagttttttgcatttcttacaaaatacga 34881134  T
Q  510 ttactttctgtccacatttttaatttggtctatgtt 545  Q
    ||||||| ||||||||||||||||||| | ||||||    
T  34881135 ttactttttgtccacatttttaatttgttatatgtt 34881170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 238 - 355
Target Start/End: Complemental strand, 25495647 - 25495532
Alignment:
Q  238 tattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaa 337  Q
    |||||| |||| |||||||||||||||||||||||| ||  |||| ||||||| |||||||||||| ||||||||||||  ||||||||| |||||||||    
T  25495647 tattcagatcatttttttactcaaccgcatggtttggttc-atttgcggttttaattttaccaaccgaaccaaaccaaactaaaccgcaatataagaaaa 25495549  T
Q  338 aacactaattaaatatgt 355  Q
    || |||||||||||||||    
T  25495548 aa-actaattaaatatgt 25495532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 245 - 336
Target Start/End: Complemental strand, 23623551 - 23623460
Alignment:
Q  245 atcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaa 336  Q
    ||||||||||||||||||||||||||||| |||| ||| ||||||| |||| || |||| |||||||||||| |||||||||||||||||||    
T  23623551 atcacttttttactcaaccgcatggtttggtttggtttgcggttttcatttgacaaaccgaaccaaaccaaaccaaaccgcaacataagaaa 23623460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 151 - 501
Target Start/End: Complemental strand, 6633951 - 6633580
Alignment:
Q  151 agggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatcgaaac------tgcaaaaagctgtatttggtttcgatatgtattcaa 244  Q
    |||||||| ||||||||||||||| ||||||||||   |||| |||| ||||| ||||      ||||||||  || |||||||||| ||  ||||||      
T  6633951 agggtgttcaaaatcgaaccaatctaatagaaaaatcataaattgaaccaatccaaaccaagactgcaaaaaattgaatttggtttcaat--gtattccg 6633854  T
Q  245 atcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatc-aaaccgcaacataagaaaaaacact 343  Q
    |||||||||| |||||||  ||||||||| |||| ||| ||||||| ||||||| |||| |||||||  ||| | ||||||||| |||||||||| |  |    
T  6633853 atcactttttcactcaactacatggtttggtttggtttgcggttttcattttacgaaccgaaccaaaaaaaaaccaaaccgcaatataagaaaaa-cttt 6633755  T
Q  344 aattaaat--atgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcat-aaatgacatatattttc--------------ttctttgccttt 426  Q
    ||||||||  ||||||  ||  ||||||||| || |||| ||||||||||||| || ||||||||||| |||||              |||||||| |||    
T  6633754 aattaaatctatgtcacgtggaccaatactcatagaaactcaatgaaaacttttataaaatgacatattttttctgttgataagttttttctttgctttt 6633655  T
Q  427 tatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttaca 501  Q
     |||||||||||||||| || ||| | |||||||| || |||||||| |||||||| ||||||  ||||||||||    
T  6633654 gatttcaaaaatgtattgatgtgctacttgaacttgtagagaatgataaaatcttaatcttttatatttcttaca 6633580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 601 - 754
Target Start/End: Complemental strand, 14652635 - 14652485
Alignment:
Q  601 attgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtctggtnnnnnnnnntgcaccaaccgatcc 700  Q
    |||||| ||| ||||||||||||  ||||||| |||||||||||||||||| ||||||||||||| ||||||| |          |||||||||||||||    
T  14652635 attgctgaaaatatgttgtgtttaagcttttttaacttgattttaatgttgaaaacaaaaaattgcatcgtctcg--aaaaaaactgcaccaaccgatcc 14652538  T
Q  701 aatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaact 754  Q
    || || ||| |||||||||||| |||||||| ||||||||||| ||||||||||    
T  14652537 aa-cccaaatcgcattggtttggtttggttcagattttatttttaaagtcaact 14652485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 429 - 753
Target Start/End: Original strand, 27571792 - 27572094
Alignment:
Q  429 tttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacattt 528  Q
    |||||||||||||||||| ||| | ||||||||||| ||||| || |||||||| |||||| ||||||||||| ||||||||||                    
T  27571792 tttcaaaaatgtatttatgtgctacttgaacttttagagaataataaaatcttaatcttttacatttcttacataatagaatta---------------- 27571875  T
Q  529 ttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggct 628  Q
        |||||| |||||||||| ||| |||||||||| |||||| | ||||  ||||||||||||||| ||| ||||||  || ||||| |||||||  ||    
T  27571876 ----tttggtttatgttgtttggtggaaatgaaattgtaatgtggaatga--ttaaaaacattgtcgaaaacattgctggaaatatgtcgtgtttta-ct 27571968  T
Q  629 ttttaaacttgattttaatgttggaaacaaaaaattgtatcgtctggtnnnnnnnnntgcaccaaccgatccaatccaaaaccgca-----ttggtttga 723  Q
    |||| ||||  ||||||||||||||||||||||||||||| |||| |           |||||||||||||||| || ||||||||     ||||||||     
T  27571969 tttttaactcaattttaatgttggaaacaaaaaattgtattgtctcg---aaaaaaccgcaccaaccgatccaa-cccaaaccgcattggtttggtttgg 27572064  T
Q  724 tttggttcggattttattttaaaagtcaac 753  Q
    ||||||||||||||||||||||||| ||||    
T  27572065 tttggttcggattttattttaaaagacaac 27572094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 691156 - 691237
Alignment:
Q  257 ctcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaa 338  Q
    ||||||||||||||||| |||||||| ||||||| |||||||||||| |||||||||||| |||||||||||| ||||||||    
T  691156 ctcaaccgcatggtttggtttgatttgcggttttcattttaccaaccgaaccaaaccaaaccaaaccgcaacaaaagaaaaa 691237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 411 - 548
Target Start/End: Original strand, 40331198 - 40331334
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    ||||||| |||  |||||||  |||||||||||||| ||| | ||||||||||| |||||||| ||||||||||||||| ||||||||| ||||||  ||    
T  40331198 tttcttcattgttttttattgtaaaaatgtatttatgtgctacttgaacttttagagaatgataaaatcttagtcttttgcatttcttaaaaaataagat 40331297  T
Q  511 tactttctgtccacatttttaatttggtctatgttgtt 548  Q
    || ||| | ||||||||||| |||||||| ||||||||    
T  40331298 tattttttatccacattttttatttggtc-atgttgtt 40331334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 486 - 673
Target Start/End: Original strand, 26007159 - 26007345
Alignment:
Q  486 ttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaa 585  Q
    |||| ||| ||||||| |||||||||||||| ||| ||| |||||||||| || ||| |||||| || ||||| ||||| |||||| |||| ||||| ||    
T  26007159 ttttacatctcttacataatagaattactttttgttcacgtttttaatttcgtttatattgtttggtaaaaataaaattgtaatgtaggataaaatttaa 26007258  T
Q  586 aacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    || ||| ||| ||| |||| |  || ||||||||||| | ||||||| |||||||||||||||||| |||| | ||||| ||| ||||    
T  26007259 aatattatcgaaaacattgttggaaatatgttgtgttatagcttttt-aacttgattttaatgttgaaaacgacaaattatattgtct 26007345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 409 - 673
Target Start/End: Original strand, 7487031 - 7487291
Alignment:
Q  409 attttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaataga 508  Q
    |||||||||||| | |||||||| |||||||||||| | | | | ||||||||||| | |||||| |||||||| |||| | ||||||||| | ||||      
T  7487031 attttcttctttac-ttttattttaaaaatgtatttgtgtactacttgaacttttagaaaatgataaaatcttaatcttatacatttcttagagaatatg 7487129  T
Q  509 attactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattt-taatgttggatgaaattaaaaacattgtcggaaatattgcta 607  Q
    |||| ||| |||| || |||||||||||||||||||||||  ||||| || |||||| |||| |||||| ||||  ||||  ||||  |||| |||| ||    
T  7487130 attaatttttgtctacgtttttaatttggtctatgttgttgggtgaagataaaatttgtaattttggataaaat--aaaatgttgt-tgaaacattgtta 7487226  T
Q  608 aaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
     || |||||||||| ||  |||||| ||||| ||||||||||  |||||||||||| |||| ||||    
T  7487227 gaaatatgttgtgtcttaccttttt-aacttaattttaatgtctgaaacaaaaaatcgtattgtct 7487291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 411 - 516
Target Start/End: Complemental strand, 40692823 - 40692718
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    |||||||||| | |||||||||||||||||||| |||||| | |||||||||||  ||||| | |||||||||||||||  |||||||||||||||  ||    
T  40692823 tttcttctttactttttatttcaaaaatgtattcatatgctacttgaacttttagtgaatgttaaaatcttagtcttttgtatttcttacaaaatatgat 40692724  T
Q  511 tacttt 516  Q
    ||||||    
T  40692723 tacttt 40692718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 153 - 356
Target Start/End: Original strand, 40108990 - 40109190
Alignment:
Q  153 ggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatcgaaactgcaaaaagctgtatttggtttcgatatgtattcaaatcacttt 252  Q
    |||||| |||| |||| |||| ||||| |||||||| ||||  |  ||||| |||| | ||||| ||||||||||  ||   ||||||||| ||||  ||    
T  40108990 ggtgttcaaaaccgaatcaattcaatataaaaactgcaaaccaacccaatcaaaaccgtaaaaatctgtatttgg--tccggatgtattcatatcaaatt 40109087  T
Q  253 tttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaata 352  Q
    |||||||||||| ||| ||||||||| ||| || ||||||||||| ||||| |  |||||||||  ||||||||||||||| ||||||| |||||||| |    
T  40109088 tttactcaaccgtatgatttgatttggtttgcgatttttattttaacaaccgagtcaaaccaaacaaaaccgcaacataag-aaaaacattaattaaaca 40109186  T
Q  353 tgtc 356  Q
    ||||    
T  40109187 tgtc 40109190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 411 - 541
Target Start/End: Complemental strand, 10090596 - 10090467
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    |||||||||||| |||| | | |||||||||||||| ||| | || |||| ||| ||||||||  ||| ||||||||||  |||||||||||||||| ||    
T  10090596 tttcttctttgctttttctataaaaaatgtatttatgtgctacttaaactcttagagaatgatttaattttagtcttttgtatttcttacaaaataggat 10090497  T
Q  511 tactttctgtccacatttttaatttggtcta 541  Q
    |||||| |||||| | |||||||||||||||    
T  10090496 tactttttgtcca-aattttaatttggtcta 10090467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 288 - 350
Target Start/End: Complemental strand, 22553863 - 22553802
Alignment:
Q  288 ttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaa 350  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  22553863 ttttattttaccaaccaaaccaaaccaaaccaaaccgcaacataaga-aaaacactaattaaa 22553802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 460 - 602
Target Start/End: Original strand, 22747341 - 22747482
Alignment:
Q  460 ttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtttagtgaaaatg 559  Q
    ||||| |||||||| ||||| | ||||||| ||||||||||| ||||| |||| ||| |||||| ||||| ||||| |||||| |||||| ||||||||     
T  22747341 ttttatagaatgat-aaatcctggtcttttacatttcttacataataggattattttttgtccatattttaaattttgtctatattgttttgtgaaaata 22747439  T
Q  560 aaattttaatgttggatgaaattaaaaacattgtcggaaatat 602  Q
    ||||| ||||||   |||||||| |||||||||| | ||||||    
T  22747440 aaattgtaatgtgatatgaaatttaaaacattgttgaaaatat 22747482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 235 - 348
Target Start/End: Original strand, 33901524 - 33901636
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    |||||||| ||| | ||||| | |||||||| ||||||||||  |||| |||||||||||||||||||| || ||| | ||| ||||||||||||||||     
T  33901524 atgtattcgaattattttttaattcaaccgcgtggtttgattcaatttgcggtttttattttaccaacctaatcaatctaaaccaaaccgcaacataag- 33901622  T
Q  335 aaaaacactaatta 348  Q
    ||||||||||||||    
T  33901623 aaaaacactaatta 33901636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 235 - 400
Target Start/End: Complemental strand, 4414778 - 4414613
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||||||| |||| ||||||||||||||| ||||||||||||| |||   ||||||||||||| |||  || ||||||||| |||||  |||||||||     
T  4414778 atgtattcatatcatttttttactcaaccgtatggtttgatttggtttgttgtttttattttacgaactgaa-caaaccaaaccaaactacaacataag- 4414681  T
Q  335 aaaaacactaattaa--atatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaa 400  Q
    ||||||| |||||||  ||||||||| |   ||||||||  || |||| ||||||||||||| |||||    
T  4414680 aaaaacattaattaaacatatgtcatataaaccaatacttatagaaactcaatgaaaacttttataaa 4414613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 601 - 673
Target Start/End: Complemental strand, 11402775 - 11402704
Alignment:
Q  601 attgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    |||||| ||| ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11402775 attgctgaaaatatgttgtgtttcagctttttaa-cttgattttaatgttggaaacaaaaaattgtatcgtct 11402704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 205 - 316
Target Start/End: Original strand, 28224360 - 28224469
Alignment:
Q  205 aaactgcaaaaagctgtatttggtttcgatatgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaacca 304  Q
    |||||||||||| ||||||||||||  |||  ||||||  |||| ||||||||||||| |||| ||||| |||| ||| ||||||| ||||||||||||     
T  28224360 aaactgcaaaaaactgtatttggttcagat--gtattcggatcatttttttactcaactgcatagtttggtttggtttgcggttttgattttaccaaccg 28224457  T
Q  305 aaccaaaccaaa 316  Q
    ||||||||||||    
T  28224458 aaccaaaccaaa 28224469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 411 - 506
Target Start/End: Original strand, 40109335 - 40109431
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatctt-agtcttttccatttcttacaaaata 506  Q
    |||||||||||| ||||||||||||||||||||||  ||| ||||||||||| | |||||||| ||||||| | |||||| ||| ||||||||||||    
T  40109335 tttcttctttgctttttatttcaaaaatgtatttacgtgctatttgaactttcatagaatgataaaatcttaaatcttttgcatctcttacaaaata 40109431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 424 - 587
Target Start/End: Complemental strand, 36760456 - 36760293
Alignment:
Q  424 ttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtcca 523  Q
    ||||||||||||||||||||| | ||  |  | || | ||| |||||||| |||||| |||||||| |||||||||   ||| ||| |||||| ||||||    
T  36760456 ttttatttcaaaaatgtatttttgtgatacataaaatattagagaatgataaaatctcagtcttttacatttcttatctaatggaaatactttttgtcca 36760357  T
Q  524 catttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaa 587  Q
     |||||| |||| ||  ||||| ||| |||||||| ||||| |||||||| |||||||||||||    
T  36760356 tattttttatttagtacatgttttttggtgaaaataaaattgtaatgttgaatgaaattaaaaa 36760293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 687 - 753
Target Start/End: Original strand, 20191963 - 20192028
Alignment:
Q  687 gcaccaaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    |||| |||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  20191963 gcacaaaccgatccaattcaaa-ccgcattggtttgatttagttcggattttattttaaaagtcaac 20192028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 235 - 312
Target Start/End: Complemental strand, 33793185 - 33793108
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaac 312  Q
    ||||||||| |||| |||||||||||||||  |||||||||||| ||| ||||||| |||||| ||||||||||||||    
T  33793185 atgtattcagatcatttttttactcaaccgtgtggtttgatttggtttgcggttttgattttatcaaccaaaccaaac 33793108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 203 - 338
Target Start/End: Complemental strand, 36568295 - 36568162
Alignment:
Q  203 cgaaactgcaaaaagctgtatttggtttcgatatgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaac 302  Q
    |||||||||||||| | | ||||||||  |||  ||||||| |||| ||||| |||||||| ||||||||| ||   ||| ||||||| |||||||||||    
T  36568295 cgaaactgcaaaaaaccgcatttggttcagat--gtattcagatcaatttttaactcaaccacatggtttggttcagtttgcggttttgattttaccaac 36568198  T
Q  303 caaaccaaaccaaatcaaaccgcaacataagaaaaa 338  Q
    | |||||||||||  |||||| ||| ||||||||||    
T  36568197 cgaaccaaaccaatccaaaccacaatataagaaaaa 36568162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 40692983 - 40692915
Alignment:
Q  245 atcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacc 313  Q
    |||| ||||||||||||||  |||||||| |||  ||||||||||||||||||||||||||||||||||    
T  40692983 atcatttttttactcaaccttatggtttggtttagtttacggtttttattttaccaaccaaaccaaacc 40692915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 411 - 489
Target Start/End: Original strand, 7591195 - 7591273
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtctttt 489  Q
    |||||||||| | ||||||||||||||||| ||||| ||| | ||||||||||| | |||||| |||||||||||||||    
T  7591195 tttcttctttactttttatttcaaaaatgtctttatgtgctacttgaacttttagataatgataaaatcttagtctttt 7591273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 454 - 548
Target Start/End: Complemental strand, 14652782 - 14652688
Alignment:
Q  454 ttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtt 548  Q
    ||||| ||||| |||||||| |||||||| ||||||  |||||||||||||||| ||||| |  ||||||  ||||||| |||||||||||||||    
T  14652782 ttgaaattttagagaatgataaaatcttaatcttttgaatttcttacaaaataggattacatattgtccatgtttttaagttggtctatgttgtt 14652688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 6595464 - 6595388
Alignment:
Q  257 ctcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaa 338  Q
    |||||| |||||||||| |||| ||| ||||||| |||||||||||||||||||||     |||||||||||||||||||||    
T  6595464 ctcaactgcatggtttggtttggtttgcggttttcattttaccaaccaaaccaaac-----caaaccgcaacataagaaaaa 6595388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 235 - 316
Target Start/End: Original strand, 42920099 - 42920180
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaa 316  Q
    |||||||  ||||||||||| |||||| ||||||||||| |||||||| ||||||||||||||| || | || |||||||||    
T  42920099 atgtatttgaatcactttttgactcaagcgcatggtttggtttgatttgcggtttttattttacgaatcgaatcaaaccaaa 42920180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 411 - 495
Target Start/End: Original strand, 2796539 - 2796623
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccattt 495  Q
    |||||||||| | ||||||||||||||||||||||| ||| | ||||| ||||| ||||| || |||| |||||||||| |||||    
T  2796539 tttcttctttactttttatttcaaaaatgtatttatgtgctacttgaaattttatagaattataaaattttagtcttttgcattt 2796623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 411 - 495
Target Start/End: Original strand, 2802700 - 2802784
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccattt 495  Q
    |||||||||| | ||||||||||||||||||||||| ||| | ||||| ||||| ||||| || |||| |||||||||| |||||    
T  2802700 tttcttctttactttttatttcaaaaatgtatttatgtgctacttgaaattttatagaattataaaattttagtcttttgcattt 2802784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 526 - 602
Target Start/End: Original strand, 7591399 - 7591475
Alignment:
Q  526 tttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatat 602  Q
    |||| |||||||||||| |||||  ||||||||||||||||| ||| |||||||||  |||||||||| ||||||||    
T  7591399 ttttaaatttggtctattttgttgggtgaaaatgaaattttactgtcggatgaaatataaaacattgttggaaatat 7591475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 552 - 624
Target Start/End: Original strand, 20191797 - 20191869
Alignment:
Q  552 tgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgtttt 624  Q
    ||||||||||||||||||||| ||||||||| |||||||||| | ||| ||||||  || |||||||||||||    
T  20191797 tgaaaatgaaattttaatgttcgatgaaatttaaaacattgttgcaaacattgctggaaatatgttgtgtttt 20191869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 553 - 668
Target Start/End: Complemental strand, 35727183 - 35727068
Alignment:
Q  553 gaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgt-tttggctttttaaacttgattttaatgttg 651  Q
    ||||||||||||||||| |||||||||||| ||||||  || |||||||||||| ||  | |||||||| |||  || ||| || |||||||||||||||    
T  35727183 gaaaatgaaattttaatattggatgaaatttaaaacacagttggaaatattgctgaacatttgttgtgtgtttaactattt-aatttgattttaatgttg 35727085  T
Q  652 gaaacaaaaaattgtat 668  Q
     ||||||||| ||||||    
T  35727084 aaaacaaaaatttgtat 35727068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 235 - 314
Target Start/End: Original strand, 2796355 - 2796434
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacca 314  Q
    ||||||||  |||||||||||||| |||||||||||||| ||   |||  |||||||||||||||||||||| |||||||    
T  2796355 atgtattcggatcacttttttacttaaccgcatggtttgtttcagtttgtggtttttattttaccaaccaaatcaaacca 2796434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 235 - 314
Target Start/End: Original strand, 2802516 - 2802595
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacca 314  Q
    ||||||||  |||||||||||||| |||||||||||||| ||   |||  |||||||||||||||||||||| |||||||    
T  2802516 atgtattcggatcacttttttacttaaccgcatggtttgtttcagtttgtggtttttattttaccaaccaaatcaaacca 2802595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 313
Target Start/End: Complemental strand, 23418603 - 23418439
Alignment:
Q  148 actagggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatc-gaaactgcaaaaagctgtatttggtttcgatatgtattcaaat 246  Q
    |||||||||||||||| |||||  |||||||| ||||||   ||||  || ||| | ||||| ||||||| ||||||||||||  |||||  ||||  ||    
T  23418603 actagggtgtttaaaaccgaacatatccaataaaaaaaccacaaaccaaaccaaaccgaaaccgcaaaaaactgtatttggttcggatat--attcggat 23418506  T
Q  247 cacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacc 313  Q
    || ||| |||||||||||| ||||||| || | |||  ||||||||||||||| ||| |||||||||    
T  23418505 cattttattactcaaccgcgtggtttggttcggtttgaggtttttattttaccgaccgaaccaaacc 23418439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 466 - 548
Target Start/End: Complemental strand, 11402909 - 11402827
Alignment:
Q  466 agaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtt 548  Q
    |||||||| ||||||||||||||| | ||||||||||||||  ||||  || ||||||  ||||||| |||||||||||||||    
T  11402909 agaatgataaaatcttagtcttttacttttcttacaaaatatgattatgttttgtccatgtttttaacttggtctatgttgtt 11402827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 34880912 - 34880961
Alignment:
Q  303 caaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaatat 353  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  34880912 caaaccaaaccaaatcaaaccgcaacataag-aaaaacattaattaaatat 34880961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 235 - 316
Target Start/End: Original strand, 22747121 - 22747202
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaa 316  Q
    ||||||||  |||| ||||||| ||||||||||||||||||| | ||| |||||||||||| | ||||| |||| |||||||    
T  22747121 atgtattcggatcaattttttattcaaccgcatggtttgattcggtttgcggtttttatttgatcaaccgaaccgaaccaaa 22747202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 712 - 753
Target Start/End: Original strand, 32244384 - 32244425
Alignment:
Q  712 gcattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  32244384 gcatttgtttgatttggttcggattttattttaaaagtcaac 32244425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 38176081 - 38176134
Alignment:
Q  279 atttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataa 332  Q
    |||||||||||||||||||||||||||| |||||| || ||||||||| |||||    
T  38176081 atttacggtttttattttaccaaccaaatcaaaccgaaccaaaccgcagcataa 38176134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 38203305 - 38203358
Alignment:
Q  279 atttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataa 332  Q
    |||||||||||||||||||||||||||| |||||| || ||||||||| |||||    
T  38203305 atttacggtttttattttaccaaccaaatcaaaccgaaccaaaccgcagcataa 38203358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 540 - 668
Target Start/End: Complemental strand, 2423040 - 2422914
Alignment:
Q  540 tatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttg 639  Q
    |||||||||| |||  ||||||||| |||||| | ||||| ||||||||| ||||| ||| |||  | ||| ||||| |||||||  |||||||| || |    
T  2423040 tatgttgtttggtggtaatgaaattgtaatgtagaatgaa-ttaaaaacactgtcgtaaacatttttgaaaatatgtcgtgttttacctttttaa-ctcg 2422943  T
Q  640 attttaatgttggaaacaaaaaattgtat 668  Q
    ||||||||||| |||||||||| ||||||    
T  2422942 attttaatgttagaaacaaaaacttgtat 2422914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 250 - 334
Target Start/End: Complemental strand, 19402777 - 19402694
Alignment:
Q  250 ttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||||||||||||||| |||||| ||   ||| |||||||||||||||||||||||| ||| || | |||||||||| ||||||    
T  19402777 ttttttactcaaccgcacggtttggttatgtttgcggtttttattttaccaaccaaactaaa-cacaccaaaccgcaatataaga 19402694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 424 - 484
Target Start/End: Complemental strand, 25715604 - 25715544
Alignment:
Q  424 ttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagt 484  Q
    |||||||| |||||||||||||| ||| | ||||||||||| |||||||| ||||||||||    
T  25715604 ttttatttaaaaaatgtatttatgtgctacttgaacttttagagaatgataaaatcttagt 25715544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 411 - 499
Target Start/End: Complemental strand, 39052923 - 39052835
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttctta 499  Q
    |||||||||| | |||||||| |||||| ||||||| ||| | ||||||||||| || ||||| |||||||| |||| | |||||||||    
T  39052923 tttcttctttacattttattttaaaaatatatttatgtgctacttgaacttttatagtatgataaaatcttaatcttatacatttctta 39052835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 691465 - 691519
Alignment:
Q  607 aaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaa 662  Q
    |||| |||||||||||||  |||||||| |||||||||||||||||||||||||||    
T  691465 aaaaatatgttgtgttttaactttttaa-cttgattttaatgttggaaacaaaaaa 691519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 411 - 506
Target Start/End: Complemental strand, 4414588 - 4414493
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaata 506  Q
    |||||||||||| ||||||||||||| |||||| |||||  | |||||  ||||  ||||| | |||||||||||||||  |||| ||||||||||    
T  4414588 tttcttctttgctttttatttcaaaagtgtattcatatgttacttgaatctttagtgaatgttaaaatcttagtcttttgtattttttacaaaata 4414493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 431 - 541
Target Start/End: Complemental strand, 25495437 - 25495327
Alignment:
Q  431 tcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaa-tcttagtcttttccatttcttacaaaatagaattactttctgtccacatttt 529  Q
    |||| ||| ||||||| ||| | ||||||| ||| |||||||| ||| | ||||||||||  |||||||||||||||  |||||||| |||||||  |||    
T  25495437 tcaataatatatttatgtgctacttgaactcttagagaatgattaaaattttagtcttttgtatttcttacaaaataagattactttttgtccac-gttt 25495339  T
Q  530 taatttggtcta 541  Q
    ||||||||||||    
T  25495338 taatttggtcta 25495327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 235 - 298
Target Start/End: Original strand, 42920568 - 42920631
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttac 298  Q
    |||||||  ||||||||||| |||||| ||||||||||| |||| ||| |||||||||||||||    
T  42920568 atgtatttgaatcactttttgactcaagcgcatggtttggtttggtttgcggtttttattttac 42920631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 493 - 564
Target Start/End: Original strand, 42920818 - 42920889
Alignment:
Q  493 tttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaatt 564  Q
    ||||||||| |||||||||||||| |||| || || |||||||| | ||| |||||| ||||||||||||||    
T  42920818 tttcttacataatagaattactttgtgtcaacgttgttaatttgatttatattgtttggtgaaaatgaaatt 42920889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 691 - 753
Target Start/End: Complemental strand, 6633414 - 6633353
Alignment:
Q  691 caaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    ||||||||||||  |||| || |||||||||| |||||||| |||||||||||||||||||||    
T  6633414 caaccgatccaactcaaa-ccacattggtttggtttggttcagattttattttaaaagtcaac 6633353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 235 - 313
Target Start/End: Complemental strand, 11403145 - 11403068
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacc 313  Q
    ||||| |||||||| ||| |||||||||| |||| ||||||||  | | |||||||||||||||||||| |||||||||    
T  11403145 atgtaatcaaatcattttcttactcaaccacatg-tttgatttcgtctgcggtttttattttaccaaccgaaccaaacc 11403068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 715 - 753
Target Start/End: Original strand, 17132101 - 17132139
Alignment:
Q  715 ttggtttgatttggttcggattttattttaaaagtcaac 753  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  17132101 ttggtttggtttggttcggattttattttaaaagtcaac 17132139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 284 - 338
Target Start/End: Complemental strand, 39730763 - 39730709
Alignment:
Q  284 cggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaa 338  Q
    ||||||| |||||||||||||||| |||||||| | ||| |||||||||||||||    
T  39730763 cggttttcattttaccaaccaaacaaaaccaaaccgaactgcaacataagaaaaa 39730709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 245 - 350
Target Start/End: Original strand, 40331019 - 40331122
Alignment:
Q  245 atcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacacta 344  Q
    |||| ||||||||||||| | || |||| ||| | |||  ||||||||||||||||||  || ||||| ||| |||||||| |||||  |||||||||||    
T  40331019 atcatttttttactcaactgtatagtttaattcggtttgtggtttttattttaccaacagaatcaaactaaaccaaaccgctacata--aaaaaacacta 40331116  T
Q  345 attaaa 350  Q
    ||||||    
T  40331117 attaaa 40331122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 612 - 662
Target Start/End: Complemental strand, 41455039 - 41454990
Alignment:
Q  612 tatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaa 662  Q
    ||||||||||||| |||||||||  ||||||||||||||||||||||||||    
T  41455039 tatgttgtgttttagctttttaat-ttgattttaatgttggaaacaaaaaa 41454990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 662
Target Start/End: Complemental strand, 6633504 - 6633440
Alignment:
Q  597 aaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaa 662  Q
    |||||||||| ||| |||||||||||||  |||||||| || ||||||||||||| ||||||||||    
T  6633504 aaatattgctgaaaatatgttgtgttttacctttttaa-ctggattttaatgttgaaaacaaaaaa 6633440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 235 - 308
Target Start/End: Complemental strand, 6719122 - 6719049
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaacc 308  Q
    ||||||||| || || |||||||||| || ||||||||| || | ||| || ||||||||||||||||||||||    
T  6719122 atgtattcatattacatttttactcagccacatggtttggttcggtttgcgttttttattttaccaaccaaacc 6719049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 235 - 336
Target Start/End: Complemental strand, 25715800 - 25715699
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    |||||||  ||||| || |||||||||||| |||||||| |||  |||| ||||||||||||  ||||| |||| || |||| ||||||  |||||||||    
T  25715800 atgtatttgaatcatttctttactcaaccgtatggtttggtttagtttatggtttttattttttcaaccgaaccgaatcaaaccaaaccaaaacataaga 25715701  T
Q  335 aa 336  Q
    ||    
T  25715700 aa 25715699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 235 - 308
Target Start/End: Original strand, 26006911 - 26006983
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaacc 308  Q
    |||||||||||||||||| | ||||||| ||||| |||  || ||||||| |||||||||||| ||||||||||    
T  26006911 atgtattcaaatcactttat-actcaactgcatgatttagttcgatttacagtttttattttatcaaccaaacc 26006983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 411 - 512
Target Start/End: Complemental strand, 26690175 - 26690074
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    ||||||||||   ||||||||||||||| ||||||||| | | || ||  |||| |||||||| |||||||| | |||  ||||||||||| ||||||||    
T  26690175 tttcttctttattttttatttcaaaaatatatttatatactacttcaaagtttatagaatgataaaatcttaatgtttaacatttcttacataatagaat 26690076  T
Q  511 ta 512  Q
    ||    
T  26690075 ta 26690074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 411 - 512
Target Start/End: Complemental strand, 26959907 - 26959806
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    ||||||||||   ||||||||||||||| ||||||||| | | || ||  |||| |||||||| |||||||| | |||  ||||||||||| ||||||||    
T  26959907 tttcttctttattttttatttcaaaaatatatttatatactacttcaaagtttatagaatgataaaatcttaatgtttaacatttcttacataatagaat 26959808  T
Q  511 ta 512  Q
    ||    
T  26959807 ta 26959806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 593
Target Start/End: Original strand, 34881190 - 34881231
Alignment:
Q  552 tgaaaatgaaattttaatgttggatgaaattaaaaacattgt 593  Q
    ||||||| ||||||||||||||||||||||| ||||||||||    
T  34881190 tgaaaataaaattttaatgttggatgaaatttaaaacattgt 34881231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 424 - 516
Target Start/End: Complemental strand, 36568069 - 36567976
Alignment:
Q  424 ttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaat-cttagtcttttccatttcttacaaaatagaattacttt 516  Q
    |||| |||||||||||||||||| | | | ||||||| ||| |||||||| ||||  ||||||||||  |||||||||||||||  ||||||||    
T  36568069 ttttctttcaaaaatgtatttatgtactacttgaactcttagagaatgataaaatatttagtcttttgtatttcttacaaaatatgattacttt 36567976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 298 - 355
Target Start/End: Complemental strand, 38147607 - 38147551
Alignment:
Q  298 ccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaatatgt 355  Q
    ||||||||| ||||||||| |||||| |||||||||| ||||||||||||||| ||||    
T  38147607 ccaaccaaaacaaaccaaaccaaaccccaacataaga-aaaacactaattaaacatgt 38147551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 552 - 668
Target Start/End: Complemental strand, 12264091 - 12263977
Alignment:
Q  552 tgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttg 651  Q
    ||||||||||||| |||| ||||||||||||  ||||||||| ||| | |||||| ||| || ||||| ||||  |||||| | ||| ||||| ||||||    
T  12264091 tgaaaatgaaattgtaattttggatgaaatttgaaacattgttggatacattgctgaaaataagttgt-ttttaacttttt-atctttattttgatgttg 12263994  T
Q  652 gaaacaaaaaattgtat 668  Q
     |||||||||| |||||    
T  12263993 aaaacaaaaaaatgtat 12263977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 238 - 313
Target Start/End: Complemental strand, 34087910 - 34087834
Alignment:
Q  238 tattcaaatcactttttt-actcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacc 313  Q
    ||||||||||| |||||| ||| |||||| ||||||| || | ||| | ||||| ||||||||||||||||||||||    
T  34087910 tattcaaatcattttttttacttaaccgcgtggtttggttcggtttgcagttttgattttaccaaccaaaccaaacc 34087834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 721 - 753
Target Start/End: Original strand, 40331507 - 40331539
Alignment:
Q  721 tgatttggttcggattttattttaaaagtcaac 753  Q
    |||||||||||||||||||||||||||||||||    
T  40331507 tgatttggttcggattttattttaaaagtcaac 40331539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 276 - 312
Target Start/End: Complemental strand, 42337453 - 42337417
Alignment:
Q  276 ttgatttacggtttttattttaccaaccaaaccaaac 312  Q
    ||||||||||||||||||||||||| |||||||||||    
T  42337453 ttgatttacggtttttattttaccatccaaaccaaac 42337417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 459 - 549
Target Start/End: Original strand, 563692 - 563783
Alignment:
Q  459 cttttaaagaatgatgaaatcttagtcttttccatttctt-acaaaatagaattactttctgtccacatttttaatttggtctatgttgttt 549  Q
    |||||| |||||||| |||||  |||||||| ||||| || | ||||||  | |||||| | ||||||||||||||||| ||||||||||||    
T  563692 cttttagagaatgataaaatcacagtcttttacatttttttataaaatatgactactttttatccacatttttaatttgatctatgttgttt 563783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 475 - 546
Target Start/End: Original strand, 691335 - 691406
Alignment:
Q  475 aaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttg 546  Q
    |||||||||| |||| ||||||||| ||||||| ||| | || ||||||  ||||||| |||||||||||||    
T  691335 aaatcttagtattttgcatttcttaaaaaataggattgcgttttgtccatgtttttaacttggtctatgttg 691406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 6595157 - 6595103
Alignment:
Q  607 aaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaa 662  Q
    |||| |||||||||||||  |||||||| || ||||||||||||||||||||||||    
T  6595157 aaaaatatgttgtgttttaactttttaatct-gattttaatgttggaaacaaaaaa 6595103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 193
Target Start/End: Original strand, 9988414 - 9988453
Alignment:
Q  154 gtgtttaaaatcgaaccaatccaatagaaaaactgtaaac 193  Q
    ||||| |||| |||||||||||||||||||||||||||||    
T  9988414 gtgttcaaaaccgaaccaatccaatagaaaaactgtaaac 9988453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 686 - 753
Target Start/End: Complemental strand, 36567816 - 36567755
Alignment:
Q  686 tgcaccaaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    ||||||||||||||||||||||| ||||||||||||| ||||      ||||||||||||||||||||    
T  36567816 tgcaccaaccgatccaatccaaa-ccgcattggtttggtttga-----attttattttaaaagtcaac 36567755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 687 - 753
Target Start/End: Complemental strand, 41454967 - 41454897
Alignment:
Q  687 gcaccaaccgatccaatccaaaaccgcattggtttgatttggttcgg-----attttattttaaaagtcaac 753  Q
    |||||||| ||||||||||||| ||||||||||||| ||||||| ||     ||||||||||||||||||||    
T  41454967 gcaccaacagatccaatccaaa-ccgcattggtttggtttggtttggttcagattttattttaaaagtcaac 41454897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 576 - 673
Target Start/End: Original strand, 563783 - 563877
Alignment:
Q  576 tgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    |||||||  |||| |||| ||||| ||||||| || |||| ||| |||| ||||||||| ||| |||||||||||||||  |||||||||||| ||||    
T  563783 tgaaattttaaactttgttggaaacattgctagaaatatgatgtattttagctttttaa-ctttattttaatgttggaa--aaaaaattgtattgtct 563877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 238 - 316
Target Start/End: Original strand, 733491 - 733569
Alignment:
Q  238 tattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaa 316  Q
    ||||||||||| ||||| |||| || | ||| ||||||||| |||   |||||||||||| ||||||||||||| ||||    
T  733491 tattcaaatcattttttgactccactgtatgatttgatttggtttttcgtttttattttagcaaccaaaccaaatcaaa 733569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 235 - 313
Target Start/End: Complemental strand, 1681748 - 1681670
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacc 313  Q
    ||||||||| ||||  |||| ||||||||| ||||||||||||  ||| | |||||||||||| ||||  |||||||||    
T  1681748 atgtattcagatcatattttcactcaaccgtatggtttgatttagtttgcagtttttattttagcaactgaaccaaacc 1681670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 186
Target Start/End: Complemental strand, 6595572 - 6595538
Alignment:
Q  152 gggtgtttaaaatcgaaccaatccaatagaaaaac 186  Q
    ||||||||||||||||| |||||||||||||||||    
T  6595572 gggtgtttaaaatcgaaacaatccaatagaaaaac 6595538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #94
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 8541856 - 8541954
Alignment:
Q  239 attcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaa 337  Q
    |||||||||| ||| | | ||||||||||| |||| ||   ||| |||||||||||| | ||||  ||||||| ||||| |||| ||||||||||||||    
T  8541856 attcaaatcattttctaattcaaccgcatgatttggttcagtttgcggtttttatttcatcaactgaaccaaatcaaatgaaactgcaacataagaaaa 8541954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #95
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 9161588 - 9161530
Alignment:
Q  152 gggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatcgaaactg 210  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||  || ||||| ||||||    
T  9161588 gggtgttcaaaatcgaaccaacccaatagaaaaactgcaaaccaaaccaatccaaactg 9161530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #96
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 26690345 - 26690307
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttg 273  Q
    ||||||| | |||||||||||||||||||||||||||||    
T  26690345 atgtatttagatcacttttttactcaaccgcatggtttg 26690307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #97
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 26960077 - 26960039
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttg 273  Q
    ||||||| | |||||||||||||||||||||||||||||    
T  26960077 atgtatttagatcacttttttactcaaccgcatggtttg 26960039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #98
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 715 - 753
Target Start/End: Original strand, 35240835 - 35240873
Alignment:
Q  715 ttggtttgatttggttcggattttattttaaaagtcaac 753  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  35240835 ttggtttggtttggttcggattttatttttaaagtcaac 35240873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #99
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 673
Target Start/End: Original strand, 733963 - 734000
Alignment:
Q  636 cttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  733963 cttgattttaatgttggaaacaaaaagttgtattgtct 734000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #100
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 285 - 338
Target Start/End: Original strand, 27571655 - 27571707
Alignment:
Q  285 ggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaa 338  Q
    |||||| ||||| |||||| |||||||||||| |||||||||| ||||||||||    
T  27571655 ggttttcatttt-ccaaccgaaccaaaccaaaccaaaccgcaagataagaaaaa 27571707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #101
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 424 - 481
Target Start/End: Original strand, 31075350 - 31075407
Alignment:
Q  424 ttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatctt 481  Q
    ||||||||||||| ||||||||| ||  | ||||||||||| |||||||| |||||||    
T  31075350 ttttatttcaaaagtgtatttatgtgttacttgaacttttagagaatgataaaatctt 31075407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #102
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 38147758 - 38147721
Alignment:
Q  151 agggtgtttaaaatcgaaccaatccaatagaaaaactg 188  Q
    ||||| || |||||||||||||||||||||||||||||    
T  38147758 agggttttcaaaatcgaaccaatccaatagaaaaactg 38147721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 238; Significance: 1e-131; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 153 - 668
Target Start/End: Complemental strand, 8065129 - 8064605
Alignment:
Q  153 ggtgtttaaaatcgaaccaatccaata--gaaaaactgtaaactgaatcaatcgaaactgcaaaaagctgtatttggtttcgatatgtattcaaatcact 250  Q
    |||||| |||| |||||||||||||||  ||||||||||||||||||||||| ||||| ||| |||   | ||||||||| |||  |||||   ||||||    
T  8065129 ggtgttcaaaaccgaaccaatccaatatagaaaaactgtaaactgaatcaattgaaaccgcagaaaatcgcatttggttttgat--gtattaggatcact 8065032  T
Q  251 tttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaa 350  Q
    ||||||||||||  ||||| ||| || | |||  |||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  8065031 tttttactcaacaacatgggttggttcggtttgtggtttttattttacaaaccgaaccaaactaaatcaaaccgcaacataagaaaaaacactaattaaa 8064932  T
Q  351 tat--gtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaatgacatatattttctt--------------ctttgccttttatttcaa 434  Q
    |||  |||||||  | |||||||| || |||| ||||||||||||| |||||||||||||||||||||              |||||  |||||||||||    
T  8064931 tatatgtcatctatgtcaatactcatagaaactcaatgaaaacttttataaatgacatatattttcttttgttaagttttttctttgatttttatttcaa 8064832  T
Q  435 aaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatt 534  Q
    |||||||||||||  ||||| ||||||||||| |||||||||||||||||| ||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  8064831 aaatgtatttata--caattcgaacttttaaaaaatgatgaaatcttagtcgtttacatttcttacataatagaattactttttgtccacatttttaatt 8064734  T
Q  535 tggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaa 634  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||     |||||||||||| ||||||| |    
T  8064733 tgtactatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgttggaaacattgcta----gatgttgtgttttagcttttt-a 8064639  T
Q  635 acttgattttaatgttggaaacaaaaaattgtat 668  Q
    ||||||||||||||||||||||||||||||||||    
T  8064638 acttgattttaatgttggaaacaaaaaattgtat 8064605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 235 - 668
Target Start/End: Complemental strand, 17306914 - 17306473
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    |||||||| ||||||||||| ||| | | |||||||||| || | |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||    
T  17306914 atgtattcgaatcactttttcacttagctgcatggtttgcttcgttttacggtttttattttagcaaccgaaccaaaccaaatcaaacctcaacataaga 17306815  T
Q  335 aaaaacactaattaaatat--gtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaatgacatatattttctt---------ctttgcc 423  Q
     |||||||||| |||||||  ||| ||| | | ||||||| || ||||  |||||||||||| ||||||||||||| || | ||         |||        
T  17306814 gaaaacactaactaaatatatgtcttctacactaatactcatagaaacttaatgaaaacttttataaatgacatattttcttttgttaagtttcttaaat 17306715  T
Q  424 ttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtcca 523  Q
    |||||||| ||||||||||| || | |||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||    
T  17306714 ttttatttaaaaaatgtatt-atgtccaatttgaccttttaaagaatgatgaaatcttagtcttttacatttcttacataatagaattactttttgtcca 17306616  T
Q  524 catttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttt 623  Q
     ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| || ||||| ||||||    
T  17306615 tatttttaatttggcctatgttgtttagtgaaaatgaaattttaatgtttgatgaaattaaaaacattgtcagaaacattgctagaagtatgtcgtgttt 17306516  T
Q  624 tggctttttaaacttgattttaatgttggaaacaaaaaattgtat 668  Q
    |  |||||| ||||||||||||||  | |||||||||||||||||    
T  17306515 taacttttt-aacttgattttaataat-gaaacaaaaaattgtat 17306473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 411 - 673
Target Start/End: Complemental strand, 14564791 - 14564543
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    |||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||  |||         
T  14564791 tttcttctttgctttttatttcaaaaatgtatttatgtgctatttgaacttttaaagaatgatgaaatcttagtcttttacatttcttacctaat----- 14564697  T
Q  511 tactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaa 610  Q
           ||||||||||||| ||| | ||||  ||||||||||||||||||||| | |||| |||||||||||||||   ||||||||| |||| || ||    
T  14564696 -------tgtccacattttttattggatctagattgtttagtgaaaatgaaattgtgatgtcggatgaaattaaaaa-tgtgtcggaaacattgttagaa 14564605  T
Q  611 ttatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
     ||||||||||||| | ||||| ||||||||||||||||| ||||||||||||||||| ||||    
T  14564604 atatgttgtgttttag-ttttttaacttgattttaatgttcgaaacaaaaaattgtattgtct 14564543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 248 - 673
Target Start/End: Original strand, 19134646 - 19135080
Alignment:
Q  248 acttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaatt 347  Q
    |||||||| |||||||| |||||||| |||| ||| | ||||| |||||||||||| ||||||||||||     ||||||||||||||||| ||||||||    
T  19134646 actttttttctcaaccgtatggtttggtttggtttgcagttttcattttaccaaccgaaccaaaccaaa-----ccgcaacataagaaaaa-cactaatt 19134739  T
Q  348 aaat--atgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaatgacatatattttct--------------tctttgcctttt-att 430  Q
    ||||  |||||| ||     ||||||| || ||||  |||| ||||||| ||||||||||||| ||||||              ||||||  |||| |||    
T  19134740 aaatctatgtcacctagataaatactcatagaaacttaatggaaacttttataaatgacatattttttctcttgttaagtttcttctttgtttttttatt 19134839  T
Q  431 tcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacattttt 530  Q
    |||||||||||||||| ||| | ||||||||||| ||||| || ||||||||||||||| ||||||||||| ||||  |||||||| |||| |  |||||    
T  19134840 tcaaaaatgtatttatgtgctacttgaacttttagagaataataaaatcttagtcttttacatttcttacataataccattactttttgtctatgttttt 19134939  T
Q  531 aatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggcttt 630  Q
     ||||||| |||||| ||| ||| |||||||||| |||||| | ||| ||||||||||||||| | ||| ||||||  || ||||  |||||||  ||||    
T  19134940 tatttggtttatgttatttggtggaaatgaaattgtaatgtggaatg-aattaaaaacattgttgaaaacattgctggaaatatgccgtgttttaccttt 19135038  T
Q  631 ttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    || |||| ||||||||||||| |||||||||||||||| ||||    
T  19135039 tt-aactcgattttaatgttgaaaacaaaaaattgtattgtct 19135080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 411 - 661
Target Start/End: Complemental strand, 28633310 - 28633060
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    |||||| ||||| || |||||||||||||||||||| ||  | || |||||||| | |||||| |||||||||||||||  |||| ||||| ||||||||    
T  28633310 tttcttttttgctttctatttcaaaaatgtatttatgtgttacttaaacttttagaaaatgataaaatcttagtcttttatattttttacataatagaat 28633211  T
Q  511 tactttctgtccacatttttaatttggtctatgttgtttagtg-aaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaa 609  Q
    |||||| |||| || ||||||||||||| ||| |||||| ||| ||||||||||| |||| | | ||||||||||||||||||||||||| |||| || |    
T  28633210 tactttttgtcaacgtttttaatttggtttatattgtttggtgaaaaatgaaattgtaatatggaatgaaattaaaaacattgtcggaaacattgttaga 28633111  T
Q  610 attatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaa 661  Q
    | |||||||| ||||  ||||||||| | |||| |||||||| |||||||||    
T  28633110 aatatgttgtattttacctttttaaa-tcgattctaatgttgaaaacaaaaa 28633060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 475 - 673
Target Start/End: Complemental strand, 4563163 - 4562966
Alignment:
Q  475 aaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttgg 574  Q
    |||||||| |||||| ||||| ||| | ||||| |||||||| |||||||||||| ||||| |||||| |||||| |||||||| ||||| |||||||||    
T  4563163 aaatcttaatcttttacatttattaaataataggattactttttgtccacattttaaatttcgtctattttgttttgtgaaaataaaattgtaatgttgg 4563064  T
Q  575 atgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    |||||||| ||||||||||   ||| |||  | ||| ||||||||||| | ||||||| |||| |||||||||||||||||||||||||||||| ||||    
T  4563063 atgaaattgaaaacattgtttcaaacattattgaaaatatgttgtgttatagcttttt-aactcgattttaatgttggaaacaaaaaattgtattgtct 4562966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 411 - 591
Target Start/End: Original strand, 32190399 - 32190580
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    |||||||||| | |||||||||||||||||||||||  || | ||||||||||| |||||||| |||||||||||| |  ||||||| | | ||||||||    
T  32190399 tttcttcttttctttttatttcaaaaatgtatttatgcgctacttgaacttttagagaatgataaaatcttagtctctaacatttctcaaataatagaat 32190498  T
Q  511 tactttctgtccacatttttaat-ttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacatt 591  Q
    |||||| || ||||||||| ||| |||||||||||||||  |||||||||||| | |||||||| |||||||||| ||||||    
T  32190499 tactttttgaccacattttaaatattggtctatgttgttaggtgaaaatgaaaatgtaatgttgaatgaaattaacaacatt 32190580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 411 - 592
Target Start/End: Original strand, 892059 - 892240
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    |||||||| | | ||||||||||||||||||||||| ||| | ||||||||||| |||||||| |||||||| ||||||  |||||||||| ||||||||    
T  892059 tttcttctctactttttatttcaaaaatgtatttatgtgctacttgaacttttagagaatgataaaatcttaatcttttatatttcttacataatagaat 892158  T
Q  511 tactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattg 592  Q
    ||||||  |||||  ||||||||||| | |||||||||| |||||||||| ||| | ||||   || |||||||||||||||    
T  892159 tactttgcgtccatgtttttaatttgatttatgttgtttggtgaaaatgatattgtcatgtgaaattaaattaaaaacattg 892240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 518 - 673
Target Start/End: Complemental strand, 30752801 - 30752646
Alignment:
Q  518 tgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaatta-aaaacattgtcggaaatattgctaaaattatgt 616  Q
    ||||||||||||||||||||| |||||| ||| |||||||| ||||| |||||||||||||||||| ||||||| |||| ||| || | ||||| |||||    
T  30752801 tgtccacatttttaatttggtatatgttttttggtgaaaataaaattgtaatgttggatgaaattaaaaaacatcgtcgaaaacatcgttaaaaatatgt 30752702  T
Q  617 tgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    | |||||| | ||||| |||| |||||| | ||||||||||||||||||||| ||||    
T  30752701 tatgttttag-ttttttaactcgattttgaagttggaaacaaaaaattgtattgtct 30752646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 424 - 661
Target Start/End: Original strand, 13859111 - 13859346
Alignment:
Q  424 ttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtcca 523  Q
    |||||||||||| || ||||||| | | | || || ||||| |||||||| |||||| ||| |||| ||||||||||  | || ||||||||  || | |    
T  13859111 ttttatttcaaatatatatttatctactacttaaaattttacagaatgataaaatctcagtgttttacatttcttacgtactataattacttgttgacta 13859210  T
Q  524 catttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttt 623  Q
    |  ||||||||| |||||| |||||||||||||||  |||| ||||||||||| ||||| |||| ||||||||||| |||||| ||| |||||||||||     
T  13859211 cgcttttaatttcgtctatattgtttagtgaaaatacaattataatgttggat-aaatttaaaatattgtcggaaacattgctgaaaatatgttgtgtta 13859309  T
Q  624 tggctttttaaacttgattttaatgttggaaacaaaaa 661  Q
    |  | |||| |||||||||||| ||||||||| |||||    
T  13859310 taacctttt-aacttgattttagtgttggaaataaaaa 13859346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 518 - 662
Target Start/End: Original strand, 12108381 - 12108524
Alignment:
Q  518 tgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgtt 617  Q
    ||||||||||||||||||||| |||||||||| |||||||||||| | |||||| | ||||||||| ||||| |||||  || || | | ||| ||||||    
T  12108381 tgtccacatttttaatttggtttatgttgttttgtgaaaatgaaaatgtaatgtggaatgaaattataaacactgtcgataacatagttgaaaatatgtt 12108480  T
Q  618 gtgttttggctttttaaacttgattttaatgttggaaacaaaaaa 662  Q
    |||||||  |||||| ||||| |||||||||||||||||||||||    
T  12108481 gtgttttaccttttt-aacttaattttaatgttggaaacaaaaaa 12108524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 235 - 313
Target Start/End: Complemental strand, 6267552 - 6267474
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacc 313  Q
    ||||||||| ||||| ||||||||||||||||||||||| |||| ||| ||||||||||||||  ||||||||||||||    
T  6267552 atgtattcatatcacatttttactcaaccgcatggtttggtttggtttgcggtttttattttaaaaaccaaaccaaacc 6267474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 235 - 316
Target Start/End: Complemental strand, 9686602 - 9686521
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaa 316  Q
    |||||||| ||||| ||||||||||||||||||||||||||| |  || ||||||| |||||||||||| ||||||||||||    
T  9686602 atgtattcgaatcatttttttactcaaccgcatggtttgattcggattgcggttttgattttaccaaccgaaccaaaccaaa 9686521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 460 - 664
Target Start/End: Complemental strand, 4577408 - 4577206
Alignment:
Q  460 ttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtt---tagtgaaa 556  Q
    ||||| |||||||| |||||||||| |||| ||||||||    ||||| |||||||| |||||||||||| ||||| |||||| || ||   | ||||||    
T  4577408 ttttatagaatgat-aaatcttagtattttacatttcttt---aataggattactttttgtccacattttaaatttcgtctatattattatttggtgaaa 4577313  T
Q  557 atgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaac 656  Q
    || ||||| | ||||||||||||||| |||||||||||||||| |||  |  || ||||||||||| |   ||||| |||| ||||||||||||  |||     
T  4577312 ataaaattgtcatgttggatgaaattgaaaacattgtcggaaacattattggaaatatgttgtgttataagttttt-aactcgattttaatgttaaaaat 4577214  T
Q  657 aaaaaatt 664  Q
    ||||||||    
T  4577213 aaaaaatt 4577206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 414 - 548
Target Start/End: Original strand, 13531994 - 13532128
Alignment:
Q  414 cttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattac 513  Q
    ||||||||  |||||||| |||||  ||||||| ||| | ||||| ||||| |||||||| |||||||| |||||| ||||||||||||||||| |||||    
T  13531994 cttctttgttttttatttaaaaaacatatttatgtgctacttgaaattttatagaatgataaaatcttaatcttttgcatttcttacaaaataggattac 13532093  T
Q  514 tttctgtccacatttttaatttggtctatgttgtt 548  Q
      | ||||||   |||||| ||||||||| |||||    
T  13532094 gatttgtccatgattttaacttggtctattttgtt 13532128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 414 - 548
Target Start/End: Complemental strand, 20500924 - 20500790
Alignment:
Q  414 cttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattac 513  Q
    ||||||||  |||||||| ||||| ||||| |  ||| | || || |||||| ||||||| |||||||| |||||| |||||||||||||||| | ||||    
T  20500924 cttctttgatttttatttaaaaaacgtattaacgtgctacttaaaattttaatgaatgataaaatcttaatcttttgcatttcttacaaaataaacttac 20500825  T
Q  514 tttctgtccacatttttaatttggtctatgttgtt 548  Q
     || ||||||  ||||||| |||||||||||||||    
T  20500824 gttttgtccatgtttttaacttggtctatgttgtt 20500790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 411 - 530
Target Start/End: Complemental strand, 29048913 - 29048793
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaat-cttagtcttttccatttcttacaaaatagaa 509  Q
    |||||||||||| |||| |||||||||||||||||| ||| | ||||||| || ||||||||| ||||  ||||||||||  |||||||||||| ||  |    
T  29048913 tttcttctttgctttttgtttcaaaaatgtatttatgtgctacttgaactctttaagaatgataaaataattagtcttttgtatttcttacaaagtaaga 29048814  T
Q  510 ttactttctgtccacattttt 530  Q
    ||||||| ||| ||| |||||    
T  29048813 ttactttttgttcacgttttt 29048793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 530 - 673
Target Start/End: Original strand, 7676181 - 7676323
Alignment:
Q  530 taatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctt 629  Q
    ||||||| | |||||||||  |||||||||||||| ||||||   ||||||||||||| ||| ||| ||| |||| | ||| |||||||| ||||  |||    
T  7676181 taatttgatttatgttgttcggtgaaaatgaaattgtaatgtgaaatgaaattaaaaatattatcgaaaacattgttgaaaatatgttgtattttacctt 7676280  T
Q  630 tttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    ||| |||| ||||||||||||  ||| |||||||||||| ||||    
T  7676281 ttt-aactcgattttaatgtttaaaagaaaaaattgtattgtct 7676323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 235 - 338
Target Start/End: Original strand, 13531801 - 13531899
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||| ||| |||| ||| || ||||||||||||||||| |||| ||| || |||| |||||||||||||||||||||     |||||||||||||||||    
T  13531801 atgtaatcagatcattttcttgctcaaccgcatggtttggtttggtttgcgattttcattttaccaaccaaaccaaac-----caaaccgcaacataaga 13531895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 411 - 606
Target Start/End: Original strand, 14940289 - 14940484
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    |||||||||||  |||||||| |||||| ||||||  |   | ||||| | ||| |||| ||| |||||||||| |||| ||||||||||| |||| |||    
T  14940289 tttcttctttgtattttatttgaaaaatatatttacgtattacttgaaatattatagaaagataaaatcttagtgttttacatttcttacataatataat 14940388  T
Q  511 tactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgct 606  Q
    |||||| ||| ||| ||||||||||  | |||    ||| |||||||| ||||| |||| || | ||||||| |||| ||||||||||| ||||||    
T  14940389 tactttttgttcacgtttttaattttatttatacgatttggtgaaaataaaattgtaatttttgttgaaatttaaaatattgtcggaaacattgct 14940484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 411 - 489
Target Start/End: Original strand, 12108295 - 12108374
Alignment:
Q  411 tttcttctttgccttttatttcaaaa-atgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtctttt 489  Q
    |||||||||||  |||||| |||||| |||||||||||||| | ||||||||||| |||||||| |||||||||| ||||    
T  12108295 tttcttctttgatttttatgtcaaaaaatgtatttatatgccacttgaacttttagagaatgataaaatcttagtatttt 12108374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 235 - 353
Target Start/End: Complemental strand, 14564976 - 14564863
Alignment:
Q  235 atgtattcaaatcactt-ttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataag 333  Q
    |||||||||||||| || ||||||||||| |||||||||| |||  ||| | ||||||||| ||| |||| |||||||||||||      ||||||||||    
T  14564976 atgtattcaaatcatttcttttactcaactgcatggtttggtttagtttgcagtttttattatacgaaccgaaccaaaccaaat-----tgcaacataag 14564882  T
Q  334 aaaaaacactaattaaatat 353  Q
     |||||||||||||||||||    
T  14564881 -aaaaacactaattaaatat 14564863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 245 - 308
Target Start/End: Complemental strand, 29049079 - 29049016
Alignment:
Q  245 atcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaacc 308  Q
    |||| |||||||||||||||||||||||| |||| ||| ||||||| ||||||||| |||||||    
T  29049079 atcatttttttactcaaccgcatggtttggtttggtttgcggttttgattttaccagccaaacc 29049016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 250 - 351
Target Start/End: Original strand, 891882 - 891982
Alignment:
Q  250 ttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaa 349  Q
    ||||||||| |||||||||||||| |||| ||| || |||| ||||||| |||| ||||||| ||||  ||||||||| ||||| ||||||  |||||||    
T  891882 ttttttactaaaccgcatggtttggtttggtttgcgcttttcattttacgaaccgaaccaaatcaaacgaaaccgcaaaataag-aaaaactttaattaa 891980  T
Q  350 at 351  Q
    ||    
T  891981 at 891982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 292 - 408
Target Start/End: Original strand, 24644538 - 24644654
Alignment:
Q  292 attttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaatatgtcatctgcgccaatactcgtaaaaacccaatgaaaac 391  Q
    |||||||||||| |||| ||||||| |||  ||||| ||||||||| |||||||||| |||| |||| ||  ||||||||| || || | ||||||||||    
T  24644538 attttaccaaccgaacccaaccaaaccaagtcgcaatataagaaaa-acactaattatatatatcatttggaccaatactcatagaacctcaatgaaaac 24644636  T
Q  392 tttcat-aaatgacatat 408  Q
    ||| || |||||||||||    
T  24644637 tttaataaaatgacatat 24644654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 411 - 500
Target Start/End: Complemental strand, 30752937 - 30752848
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttac 500  Q
    |||||||||||  || |||||||||||||||||||| ||  | || || ||||| |||||||| |||||| |||||||| ||||||||||    
T  30752937 tttcttctttgttttctatttcaaaaatgtatttatgtgatacttaaaattttagagaatgataaaatctcagtcttttacatttcttac 30752848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 12108124 - 12108192
Alignment:
Q  245 atcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacc 313  Q
    ||||||||||  |||||||  ||||||||||||| ||| ||||||| |||||| |||||||||||||||    
T  12108124 atcactttttccctcaaccttatggtttgatttggtttgcggttttcattttatcaaccaaaccaaacc 12108192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 338
Target Start/End: Original strand, 14940074 - 14940207
Alignment:
Q  203 cgaaactgcaaaaagctgtatttggtttcgatatgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaac 302  Q
    |||||||| ||||  ||||||||| ||| |||  ||||||| |||||||||||| ||||| | || ||||| || | |||| |||||||||||||| | |    
T  14940074 cgaaactgtaaaagactgtatttgatttggat--gtattcagatcacttttttattcaacagtattgtttggttcggtttaaggtttttattttacaacc 14940171  T
Q  303 caaaccaaaccaaatcaaaccgcaacataagaaaaa 338  Q
    |||| |||| | |  ||||||||||| |||||||||    
T  14940172 caaatcaaatcgagccaaaccgcaacttaagaaaaa 14940207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 30753108 - 30753040
Alignment:
Q  245 atcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacc 313  Q
    |||||||||||||||||| |||| ||||| ||   ||| |||||||||||||||||||| |||||||||    
T  30753108 atcacttttttactcaactgcatagtttggttcagtttgcggtttttattttaccaaccgaaccaaacc 30753040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 687 - 753
Target Start/End: Original strand, 7170076 - 7170146
Alignment:
Q  687 gcaccaaccgatccaatccaaaaccgcattggtttgatttggttcgg-----attttattttaaaagtcaac 753  Q
    |||||||||||||||||||||| || |||||||||||||||||| ||     ||||||||||||||||||||    
T  7170076 gcaccaaccgatccaatccaaa-ccacattggtttgatttggtttggtttgaattttattttaaaagtcaac 7170146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 614 - 673
Target Start/End: Original strand, 13532194 - 13532251
Alignment:
Q  614 tgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    |||||||||| |||||||||| ||||||||||||||||| || |||||||||||||||||    
T  13532194 tgttgtgtttcggctttttaa-cttgattttaatgttgggaa-aaaaaattgtatcgtct 13532251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 13092487 - 13092438
Alignment:
Q  303 caaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaatat 353  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||||||||    
T  13092487 caaaccaaactaaatcaaaccgcaatataag-aaaaacactaattaaatat 13092438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 239 - 313
Target Start/End: Original strand, 13858935 - 13859009
Alignment:
Q  239 attcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacc 313  Q
    |||||| ||||| |||||||||||| |||  |||| || | ||||| |||||||||||||||||| |||||||||    
T  13858935 attcaattcactattttactcaaccacattatttggttcggtttacagtttttattttaccaaccgaaccaaacc 13859009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 596 - 662
Target Start/End: Complemental strand, 20500742 - 20500677
Alignment:
Q  596 gaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaa 662  Q
    |||| |||||| ||| ||||||||||||| | ||||||| |||||||||||||||| ||||||||||    
T  20500742 gaaacattgctgaaaatatgttgtgttttagatttttaa-cttgattttaatgttgtaaacaaaaaa 20500677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 411 - 541
Target Start/End: Complemental strand, 6400192 - 6400059
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgca---atttgaacttttaaagaatgatgaaa-tcttagtcttttccatttcttacaaaata 506  Q
    |||||||||||| |||| | |||||||||||||||  |||    | ||||||| ||| ||||| || ||| | ||||||||||  |||||||||||||||    
T  6400192 tttcttctttgctttttctatcaaaaatgtatttaggtgctgctacttgaactcttagagaataattaaaattttagtcttttgtatttcttacaaaata 6400093  T
Q  507 gaattactttctgtccacatttttaatttggtcta 541  Q
      |||||||| |||||||  |||||||||||||||    
T  6400092 agattactttttgtccac-gttttaatttggtcta 6400059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 20501091 - 20501035
Alignment:
Q  267 tggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaacc 323  Q
    ||||||| ||| |||| ||||||| |||||||||||| |||||||||||| ||||||    
T  20501091 tggtttggtttaatttgcggttttcattttaccaaccgaaccaaaccaaaccaaacc 20501035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 316
Target Start/End: Original strand, 23764766 - 23764933
Alignment:
Q  152 gggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatcgaaact------gcaaaaagctgtatttggtttcgatatgtattcaaa 245  Q
    ||||||| |||| ||||||||| |||||||||||||| |||| ||| ||| | ||||       ||||||| ||| ||||| || ||||  ||| ||| |    
T  23764766 gggtgttcaaaaccgaaccaatacaatagaaaaactgcaaaccgaaccaacccaaaccaaaaccgcaaaaaactgcatttgattccgat--gtaatcaga 23764863  T
Q  246 tcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaa 316  Q
    ||| ||| || |||||||||||| |||  ||||||||| | |||||| |||||||||| ||||||||||||    
T  23764864 tcattttcttgctcaaccgcatgatttagtttgatttatgattttta-tttaccaaccgaaccaaaccaaa 23764933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 430 - 541
Target Start/End: Original strand, 31945172 - 31945283
Alignment:
Q  430 ttcaaaaatgtatttatatgcaatttgaacttttaaagaatgat-gaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacattt 528  Q
    ||||||||||||||||| ||| ||||||||| ||| ||||| ||  |||| ||||||||||  |||||||||||| |   |||| ||| |||||||  ||    
T  31945172 ttcaaaaatgtatttatgtgctatttgaactcttagagaattatacaaattttagtcttttgtatttcttacaaagtttgattaatttttgtccac-gtt 31945270  T
Q  529 ttaatttggtcta 541  Q
    |||||||||||||    
T  31945271 ttaatttggtcta 31945283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 606 - 662
Target Start/End: Original strand, 31945337 - 31945392
Alignment:
Q  606 taaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaa 662  Q
    ||||| ||||||||||||| |||||||||  ||||||||||| ||||||||||||||    
T  31945337 taaaaatatgttgtgttttagctttttaat-ttgattttaatattggaaacaaaaaa 31945392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 686 - 749
Target Start/End: Complemental strand, 9686152 - 9686095
Alignment:
Q  686 tgcaccaaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagt 749  Q
    ||||||||| ||||||||||||| |||||||||||||     ||||||||||||||||||||||    
T  9686152 tgcaccaactgatccaatccaaa-ccgcattggtttg-----gttcggattttattttaaaagt 9686095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 353
Target Start/End: Original strand, 31944996 - 31945098
Alignment:
Q  250 ttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaa 349  Q
    ||||||||||||||||||| |||| ||   |||  |||||| |||| |||| |||||| || ||||| ||||  |||| ||||| |||||||||||||||    
T  31944996 ttttttactcaaccgcatgatttggttaagtttgtggttttgatttcaccatccaaactaatccaaaccaaattgcaatataag-aaaaacactaattaa 31945094  T
Q  350 atat 353  Q
    ||||    
T  31945095 atat 31945098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 694 - 753
Target Start/End: Original strand, 31945420 - 31945478
Alignment:
Q  694 ccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    ||||||||||||||| ||||||||| ||| |||| ||  |||||||||||||||||||||    
T  31945420 ccgatccaatccaaa-ccgcattggattggtttgattttgattttattttaaaagtcaac 31945478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 707 - 753
Target Start/End: Complemental strand, 13092074 - 13092028
Alignment:
Q  707 aaaccgcattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    |||||||||||||||| |||| | || ||||||||||||||||||||    
T  13092074 aaaccgcattggtttgctttgatacgaattttattttaaaagtcaac 13092028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 186
Target Start/End: Original strand, 19134556 - 19134590
Alignment:
Q  152 gggtgtttaaaatcgaaccaatccaatagaaaaac 186  Q
    |||||||||||| ||||||||||||||||||||||    
T  19134556 gggtgtttaaaaccgaaccaatccaatagaaaaac 19134590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 22414343 - 22414281
Alignment:
Q  251 tttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacc 313  Q
    |||||||||||| |||||||||| || |||||  |||||| ||||||| |||| |||||||||    
T  22414343 tttttactcaactgcatggtttggttcgatttgtggttttcattttacgaaccgaaccaaacc 22414281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 552 - 602
Target Start/End: Original strand, 24644823 - 24644873
Alignment:
Q  552 tgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatat 602  Q
    ||||||| ||||| ||||||||||||||||| |||||||||| | ||||||    
T  24644823 tgaaaataaaattgtaatgttggatgaaatttaaaacattgttgaaaatat 24644873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 612 - 662
Target Start/End: Complemental strand, 29048290 - 29048241
Alignment:
Q  612 tatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaa 662  Q
    |||||||||||||  ||||||||  ||||||||||||||||||||||||||    
T  29048290 tatgttgtgttttaactttttaat-ttgattttaatgttggaaacaaaaaa 29048241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 715 - 752
Target Start/End: Complemental strand, 11417127 - 11417090
Alignment:
Q  715 ttggtttgatttggttcggattttattttaaaagtcaa 752  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  11417127 ttggtttggtttggtttggattttattttaaaagtcaa 11417090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 687 - 768
Target Start/End: Original strand, 24644942 - 24645016
Alignment:
Q  687 gcaccaaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaactaatcataaccaaac 768  Q
    ||||| |||||||||||||||| | ||||||||||| |||||     |||||||||||||||||||| ||||| ||||||||    
T  24644942 gcacccaccgatccaatccaaa-ctgcattggtttggtttgg-----attttattttaaaagtcaacgaatca-aaccaaac 24645016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 270 - 351
Target Start/End: Complemental strand, 28634045 - 28633965
Alignment:
Q  270 tttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaat 351  Q
    ||||||||  ||| |||||||||||||| ||| | ||| ||| || | ||||||||||||||||  ||||||||||||||||    
T  28634045 tttgatttagtttgcggtttttattttatcaatcgaacaaaaacataccaaaccgcaacataag-caaaacactaattaaat 28633965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 235 - 292
Target Start/End: Original strand, 32190262 - 32190319
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggttttta 292  Q
    ||||||||| ||||||||||| |||||| | |||||||| || | |||||||||||||    
T  32190262 atgtattcagatcacttttttgctcaactgtatggtttggttaggtttacggttttta 32190319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 181; Significance: 2e-97; HSPs: 88)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 144 - 668
Target Start/End: Original strand, 27214625 - 27215162
Alignment:
Q  144 aaacactagggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatcgaaactgcaaaaagctgtatttggtttcgatatgtattca 243  Q
    ||||| ||| ||||||||||||||| ||||| |||||||||||  ||| ||||||||||| |||| |||||||  || | ||||||| ||| |||  | |    
T  27214625 aaacagtagagtgtttaaaatcgaagcaatcaaatagaaaaaccataatctgaatcaatcaaaaccgcaaaaaattgcagttggtttggatgtgt--taa 27214722  T
Q  244 aatcact-tttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacac 342  Q
     |||||| ||||||||||||| |||||||   || | ||| || |||||||||||| |||||||  |||||||||||||| ||||||| |||| |||  |    
T  27214723 gatcactctttttactcaaccacatggttcagttcggtttgcgatttttattttacgaaccaaattaaaccaaatcaaactgcaacattagaagaaatgc 27214822  T
Q  343 taattaaatat--gtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaatgacatatatt--------------ttcttctttgccttt 426  Q
    |||||||||||  ||||||| ||  ||||||| || |||  ||||| ||||||| ||||||||||||||||              ||||||||||| |||    
T  27214823 taattaaatatatgtcatctacgttaatactcatagaaattcaatggaaacttttataaatgacatatattatcttttgttaagtttcttctttgctttt 27214922  T
Q  427 tatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacat 526  Q
    | | |||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||| ||||||||||| |||| ||||||||| |||||||||    
T  27214923 tttctcaaaaatgtatttatgtgcaatttgaacttttaaagaatgaagatatcttagtcttttacatttcttacataatataattacttt-tgtccacat 27215021  T
Q  527 ttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttgg 626  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||  ||   || || |||||||||||||      
T  27215022 ttttaacttggtctatattgtttagtgaaaatgaaattttaatgttggatggaataaaaaacattgtcgaaaccatgtatagaagtatgttgtgttttaa 27215121  T
Q  627 ctttttaaacttgattttaatgttggaaacaaaaaattgtat 668  Q
    |||||| ||||  |||||||||||||||||||||||||||||    
T  27215122 cttttt-aactcaattttaatgttggaaacaaaaaattgtat 27215162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 414 - 749
Target Start/End: Original strand, 26524655 - 26524986
Alignment:
Q  414 cttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattac 513  Q
    ||||||| | ||||||||||||||||| || || |||  ||||| ||||||||||| |||||||||||| |||||| ||||||||||| |||| ||||||    
T  26524655 cttctttactttttatttcaaaaatgttttaatgtgctttttgatcttttaaagaacgatgaaatcttaatcttttacatttcttacataatataattac 26524754  T
Q  514 tttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaatta 613  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| || ||    
T  26524755 tttttgtccacagttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcgaaaacattgctagaaata 26524854  T
Q  614 tgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtctggtnnnnnnnnntgcaccaaccgatccaatccaaaaccgc 713  Q
    ||||||||||| ||||||| ||||| |||||||||||||||||| ||||||| || |||||||          |||||||||||||||| ||  ||||||    
T  26524855 tgttgtgttttagcttttt-aactttattttaatgttggaaacagaaaattgcattgtctggtgaaacacc--gcaccaaccgatccaa-ccctaaccgc 26524950  T
Q  714 attggtttgatttggttcggattttattttaaaagt 749  Q
    ||||||| | |||| ||  |||||||||||||||||    
T  26524951 attggttaggtttgattatgattttattttaaaagt 26524986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 152 - 673
Target Start/End: Original strand, 524305 - 524844
Alignment:
Q  152 gggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatc------gaaactgcaaaaagctgtatttggtttcgatatgtattcaaa 245  Q
    ||||||| |||||||||||||| |||||||||||| || ||| ||| ||| |      ||||||||||||| | ||||||||||| |||  ||||||  |    
T  524305 gggtgttcaaaatcgaaccaattcaatagaaaaaccgtgaaccgaaccaacccaaactgaaactgcaaaaaaccgtatttggtttggat--gtattcgga 524402  T
Q  246 tcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaa 345  Q
    |||||||||| ||||||||||||||||| |||| ||| ||||||| |||||||||||| |||||||||||| ||||||||||||||| ||||||  ||||    
T  524403 tcacttttttgctcaaccgcatggtttggtttggtttgcggttttcattttaccaaccgaaccaaaccaaaccaaaccgcaacataa-aaaaaattctaa 524501  T
Q  346 ttaaat--atgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaa-tgacatatattttc--------------ttctttgcctttta 428  Q
    ||||||  |||||| ||   ||| ||||| || |||| ||||| ||||||| ||||| | |||||| |||||              |||||||| |||||    
T  524502 ttaaatctatgtcacctagaccagtactcatagaaactcaatggaaacttttataaaataacatattttttctattgttaagtttcttctttgcttttta 524601  T
Q  429 tttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacattt 528  Q
    |||||||||||||||||||||| | ||| ||||||| ||||| || |||| ||||| |||| |||||||| || |||||||||||||| |||||||||||    
T  524602 tttcaaaaatgtatttatatgctacttggacttttagagaataataaaatattagtattttacatttctttcataatagaattactttatgtccacattt 524701  T
Q  529 ttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggct 628  Q
    |||||||||| |||||||||| | |||||||||| | |||||| | ||||||| |||||||||||||| || ||||||  || ||||||||| |||  ||    
T  524702 ttaatttggtttatgttgtttggagaaaatgaaactgtaatgtggaatgaaataaaaaacattgtcgg-aacattgctggaaatatgttgtgctttacct 524800  T
Q  629 ttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    | || ||||  |||||||||||| ||| |||||||||||| ||||    
T  524801 tctt-aactcaattttaatgttgaaaataaaaaattgtattgtct 524844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 153 - 662
Target Start/End: Complemental strand, 40849503 - 40848977
Alignment:
Q  153 ggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatc------gaaactgcaaaaagctgtatttggtttcgatatgtattcaaat 246  Q
    |||||| ||||||||||||||||||||||||||| | ||||||||  || |      ||||| ||||||| |   ||||| ||| |||  ||||||  ||    
T  40849503 ggtgttcaaaatcgaaccaatccaatagaaaaaccgcaaactgaactaacccaaaccgaaaccgcaaaaaaccacatttgatttggat--gtattcggat 40849406  T
Q  247 cacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaat 346  Q
    ||||||||||||||||||||||||||| |||| ||| ||||||| |||||||||||| |||||||||||| |||||||||||||||||| || | |||||    
T  40849405 cacttttttactcaaccgcatggtttggtttggtttgcggttttcattttaccaaccgaaccaaaccaaaccaaaccgcaacataagaacaa-ctctaat 40849307  T
Q  347 taaat--atgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaat-gacatatatttt----------------cttctttgcctttt 427  Q
    |||||  ||||||||    ||||||||| || |||| ||||| ||||||| |||||  ||||||| ||||                ||| ||||| ||||    
T  40849306 taaatctatgtcatcgagaccaatactcatagaaactcaatggaaacttttataaaacgacatattttttttctgttgttaagtttcttttttgcttttt 40849207  T
Q  428 atttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatt 527  Q
    ||||||||||||||||||| ||    ||||||||||| |||||||| ||||   ||| |||| |||||||| || |||| ||||||||| ||||||||||    
T  40849206 atttcaaaaatgtatttatgtgttccttgaacttttagagaatgataaaat---agtattttacatttctttcataatataattactttatgtccacatt 40849110  T
Q  528 tttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggc 627  Q
    ||||||||||| |||||||||  | |||||||||| | |||||| | |||||||||||||||||||| |||| ||||||  || |||||||||||||  |    
T  40849109 tttaatttggtttatgttgttcggagaaaatgaaagtgtaatgtggaatgaaattaaaaacattgtc-gaaacattgctggaaatatgttgtgttttatc 40849011  T
Q  628 tttttaaacttgattttaatgttggaaacaaaaaa 662  Q
    ||||| |||| ||||||||||||| ||||||||||    
T  40849010 ttttt-aactcgattttaatgttgaaaacaaaaaa 40848977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 411 - 664
Target Start/End: Original strand, 26214821 - 26215070
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    |||||||||||| |||||||||||||||||||| || ||| |||||||||| |||| || ||||||||||||||   || ||||||||||| |||| |||    
T  26214821 tttcttctttgctttttatttcaaaaatgtattcatgtgctatttgaacttataaataacgatgaaatcttagt---ttacatttcttacataataaaat 26214917  T
Q  511 tactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaa 610  Q
     |||||||| |||||||||||||||| ||||||||||||||| ||||| ||||| |||||| | ||||||||||||||||||||||||| |||| |  ||    
T  26214918 aactttctgcccacatttttaatttgctctatgttgtttagtaaaaataaaattgtaatgtcgaatgaaattaaaaacattgtcggaaacattgatggaa 26215017  T
Q  611 ttatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaatt 664  Q
     |||||||||||||  |||||| || ||||||||||||||||||||||||||||    
T  26215018 atatgttgtgttttaccttttt-aatttgattttaatgttggaaacaaaaaatt 26215070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 235 - 753
Target Start/End: Complemental strand, 46147763 - 46147249
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||||||| ||||||||||| | | | ||||||||||  ||||  || ||||||| |||||||||||||||||||||||||     |||||||||||||    
T  46147763 atgtattcagatcactttttttcccgatcgcatggtttagtttggattgcggttttcattttaccaaccaaaccaaaccaaa-----ccgcaacataaga 46147669  T
Q  335 aaaaacactaattaaat--atgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaatgacatatatttt--------------cttct 418  Q
    |||| ||||||||||||  |||| |  |   | ||||||| ||||||| | ||| ||||||| ||||||||||||  ||||              |||||    
T  46147668 aaaa-cactaattaaatctatgttacatagacaaatactcataaaaactcgatggaaacttttataaatgacatacttttttgcttgttaagtttcttct 46147570  T
Q  419 ttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttct 518  Q
    |||| |||||||  |||||| ||||||| |||   ||||||||||| | ||| || ||||||||||||||| ||||||||||| |||||||||||||| |    
T  46147569 ttgctttttattcaaaaaatatatttatgtgctgcttgaacttttagacaataataaaatcttagtcttttacatttcttacataatagaattacttttt 46147470  T
Q  519 gtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttg 618  Q
    |||||| ||||| ||||||| |||||||||| ||| |||||||||| |||||| | ||| ||||||||||||||||| ||| |||||| ||||||||| |    
T  46147469 gtccacgttttttatttggtttatgttgtttggtggaaatgaaattgtaatgtggaatg-aattaaaaacattgtcgaaaacattgctgaaattatgtcg 46147371  T
Q  619 tgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtctggtnnnnnnnnntgcaccaaccgatccaatccaaaaccgcattgg 718  Q
    ||||||          || ||||||||||| ||||||||||||||||||| |||| |           |||||||||||||||| |  ||||||||||||    
T  46147370 tgtttt----------acctgattttaatgatggaaacaaaaaattgtattgtctcg--aaaaaaatcgcaccaaccgatccaa-cgtaaaccgcattgg 46147284  T
Q  719 tttgatttggttcggattttattttaaaagtcaac 753  Q
    |||| |||||||| |||||||||||||||||||||    
T  46147283 tttggtttggttcagattttattttaaaagtcaac 46147249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 411 - 666
Target Start/End: Original strand, 21237487 - 21237745
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaa---agaatgatgaaatcttagtcttttccatttcttacaaaatag 507  Q
    |||||| ||| | ||||||| ||||||||||||||||||| ||||||  ||| ||   | || ||||||||||||||||||| ||||||||||| || |     
T  21237487 tttcttattttctttttattccaaaaatgtatttatatgctatttgat-tttgaacttataaagatgaaatcttagtcttttacatttcttacataacat 21237585  T
Q  508 aattactttctgtccacatttttaatttggtctatgttgtt-tagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgct 606  Q
    ||||||||| |||||||| ||||| ||||||||||| | || |||||||||| ||||| |||||||||||||||||||||||||||||| ||| ||||||    
T  21237586 aattactttttgtccacaattttattttggtctatggttttctagtgaaaattaaattgtaatgttggatgaaattaaaaacattgtcgaaaacattgct 21237685  T
Q  607 aaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgt 666  Q
     ||| ||||||||| | |   ||||| |||||||||||||||||| ||||||||||||||    
T  21237686 gaaaatatgttgtgctctaatttttttaacttgattttaatgttgaaaacaaaaaattgt 21237745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 310 - 624
Target Start/End: Complemental strand, 2734809 - 2734491
Alignment:
Q  310 aaccaaatcaaaccgcaacataagaaaaaacactaattaaat--atgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaa-tgacat 406  Q
    ||||||| |||||| ||||| |||||||| | ||||||||||  |||||||||   ||||||||| || |||| ||||||| ||||| ||||| ||||||    
T  2734809 aaccaaaccaaaccacaacacaagaaaaatc-ctaattaaatctatgtcatctagaccaatactcatagaaactcaatgaatacttttataaaatgacat 2734711  T
Q  407 atatttt---cttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaa 503  Q
    || ||||   ||| ||    || | ||| |||||| ||||||  ||| | ||||||||||| |||||||| ||||||||||||||| ||||||||||| |    
T  2734710 atttttttctcttgttaagtttctttttaaaaaatatatttacgtgctaattgaacttttagagaatgataaaatcttagtcttttacatttcttacata 2734611  T
Q  504 atagaattactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatatt 603  Q
    |||  |||||||| | |||| ||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||| |||||||||||| |||    
T  2734610 ataagattactttttatccatatttt-aatttggtctatgttgtttagtgaaaataaaattgtaatgttggatgaaatttaaagcattgtcggaaacatt 2734512  T
Q  604 gctaaaattatgttgtgtttt 624  Q
    | | ||| |||||||||||||    
T  2734511 gttgaaaatatgttgtgtttt 2734491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 429 - 666
Target Start/End: Complemental strand, 23675726 - 23675492
Alignment:
Q  429 tttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacattt 528  Q
    |||||||||||||||||||||| ||||||||||||| |||||||| |||||||| |||||| ||||| ||||| ||||| |||||||| ||||||| |||    
T  23675726 tttcaaaaatgtatttatatgctatttgaacttttagagaatgataaaatcttaatcttttacatttattacataataggattactttttgtccacgttt 23675627  T
Q  529 ttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggct 628  Q
    ||||||| || ||| |||||| |||||||||||||| |||||||| |||| |||   |||||||||||||| |||  |  || ||| ||||||||| | |    
T  23675626 ttaatttagtgtatattgtttggtgaaaatgaaattgtaatgttgaatgacatt--caacattgtcggaaacattattggaaatatattgtgttttag-t 23675530  T
Q  629 ttttaaacttgattttaatgttggaaacaaaaaattgt 666  Q
    |||| ||||  ||||||| |||| ||| ||||||||||    
T  23675529 tttttaactcaattttaacgttgaaaataaaaaattgt 23675492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 415 - 662
Target Start/End: Complemental strand, 23033043 - 23032800
Alignment:
Q  415 ttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattact 514  Q
    |||||| | ||||||||||||||| ||||||| ||| | ||||||||| | |||||||| |||||||| ||||||  |||||||||| ||||||||||||    
T  23033043 ttctttactttttatttcaaaaatatatttatgtgctacttgaacttt-agagaatgataaaatcttaatcttttatatttcttacataatagaattact 23032945  T
Q  515 ttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattat 614  Q
    ||  || ||||||||||||||||| || |||||||  |||||||  |||  |||||||  ||||||||||||| |||||||||| |||||||  || |||    
T  23032944 ttgcgttcacatttttaatttggtttacgttgtttgctgaaaat--aatagtaatgttaaatgaaattaaaaatattgtcggaagtattgctggaaatat 23032847  T
Q  615 gttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaa 662  Q
    ||||||||||  |||||| ||||  ||||| |||||| ||||||||||    
T  23032846 gttgtgttttaccttttt-aactgaattttcatgttgaaaacaaaaaa 23032800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 235 - 355
Target Start/End: Original strand, 31287301 - 31287420
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||||||| |||| |||||||||||||||||||||||| || | ||| ||||||| |||||||||||| ||||||||||||||||||||||| |||||     
T  31287301 atgtattcagatcatttttttactcaaccgcatggtttggttcggtttgcggttttaattttaccaaccgaaccaaaccaaatcaaaccgcaatataag- 31287399  T
Q  335 aaaaacactaattaaatatgt 355  Q
    |||||||||||||||||||||    
T  31287400 aaaaacactaattaaatatgt 31287420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 238 - 673
Target Start/End: Complemental strand, 43202960 - 43202541
Alignment:
Q  238 tattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaa 337  Q
    |||||| ||||||||||||||||| ||||||||||| |||| |||  ||||||||||||||||||||||||||||||          |||||||| | ||    
T  43202960 tattcagatcacttttttactcaatcgcatggtttggtttggtttgtggtttttattttaccaaccaaaccaaacca----------caacataatacaa 43202871  T
Q  338 aacactaattaaat--atgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcata-aatgacatatattttct--------------tcttt 420  Q
    | ||||||||||||  |||||||||   |||||||||||| |||| ||||||||||||| ||| ||| |||||| ||||||              |||||    
T  43202870 a-cactaattaaatctatgtcatctagaccaatactcgtataaactcaatgaaaacttttatataataacatattttttctcttgttaagtttcttcttt 43202772  T
Q  421 gccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgt 520  Q
     | ||||||||||||||||||||||| ||| | ||||||||||| ||||| || |||||||||| ||||  ||||                  ||| |||    
T  43202771 actttttatttcaaaaatgtatttatgtgctacttgaacttttagagaataat-aaatcttagtatttt--attt------------------tttttgt 43202693  T
Q  521 ccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtg 620  Q
    | || ||||||||||| | |||||||||| |||||||||||| | ||| || | ||||||||||||| ||||| |||||  ||| | ||| |||||||||    
T  43202692 ctacgtttttaatttgatttatgttgtttggtgaaaatgaaaatgtaacgtggaatgaaattaaaaatattgtgggaaacgttgatgaaaatatgttgtg 43202593  T
Q  621 ttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    ||||  |||||| ||||| ||||||||||||||||||||||||||||| ||||    
T  43202592 tttt-acttttttaacttaattttaatgttggaaacaaaaaattgtattgtct 43202541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 203 - 350
Target Start/End: Complemental strand, 29628802 - 29628658
Alignment:
Q  203 cgaaactgcaaaaagctgtatttggtttcgatatgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaac 302  Q
    ||||||| |||||| | ||||||||||| |||  ||||||  ||||||||||| || |||||||||||||| |||| ||| || |||| |||||||||||    
T  29628802 cgaaacttcaaaaaaccgtatttggtttggat--gtattcggatcacttttttccttaaccgcatggtttggtttggtttgcgattttcattttaccaac 29628705  T
Q  303 caaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaa 350  Q
    | |||||||||||| ||||||||||||||||| |||||||||||||||    
T  29628704 cgaaccaaaccaaaccaaaccgcaacataaga-aaaacactaattaaa 29628658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 235 - 666
Target Start/End: Complemental strand, 11399680 - 11399240
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||||||  |||||||||||| ||||||||||||||||||||| ||| ||||||| ||||||| |||| ||||||| |||| ||||||||| |||||      
T  11399680 atgtattcggatcacttttttagtcaaccgcatggtttgatttggtttgcggttttcattttactaaccgaaccaaa-caaaccaaaccgcagcataa-t 11399583  T
Q  335 aaaaacactaattaaa---tatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcat-aaatgacatat--------------attttctt 416  Q
    ||||||||||||||||   ||||||| ||   |||||| || || |||  ||||| ||||||| || |||||||||||              | ||||||    
T  11399582 aaaaacactaattaaaatctatgtcacctagaccaataatcttagaaattcaatggaaacttttataaaatgacatattttgtctcttgttaagtttctt 11399483  T
Q  417 ctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattacttt 516  Q
    | |||| ||||||||| |||||||| |||| | | | ||||||||||| |||||||| |||||| ||| |||| ||||| ||||| | |||||||| |||    
T  11399482 cgttgctttttatttctaaaatgta-ttatgttctacttgaacttttagagaatgataaaatctaagtattttacatttgttacatactagaattaattt 11399384  T
Q  517 ctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgt 616  Q
      |||||| ||||||  || || ||| ||||     |||||||||| | |||||| | |||||||| ||||||||||||| ||  ||||| ||| |||||    
T  11399383 tcgtccacgtttttatgttcgtttattttgt----ggaaaatgaaaatgtaatgtggaatgaaatttaaaacattgtcgg-aaccttgctcaaaatatgt 11399289  T
Q  617 tgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgt 666  Q
    ||||||||  |||||| |||| |||| |||| ||| ||| ||||||||||    
T  11399288 tgtgttttaccttttt-aactcgattataattttgaaaataaaaaattgt 11399240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 170 - 352
Target Start/End: Original strand, 26587665 - 26587850
Alignment:
Q  170 caatccaatagaaaaactgtaaactgaatcaatcgaaactgcaaaaagctgtatttggtttcgatatgtattcaaatcacttttttactcaaccgcatgg 269  Q
    ||||| |||||||||| |||||||||||| ||| ||||| | |||||  || ||||||||| |||  ||||||| |||||||||||||||||||||||||    
T  26587665 caatctaatagaaaaattgtaaactgaattaattgaaaccgtaaaaaaatgcatttggtttagat--gtattcatatcacttttttactcaaccgcatgg 26587762  T
Q  270 tttgatttgatttacggtttttattttacc----------aaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaata 352  Q
    |||| ||||     | ||||||||||||||          ||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  26587763 tttggtttg-----cagtttttattttaccaaccgaatcaaaccaaatcaaactaaatcaaaccgcaacataagaaaaaacactaattaaata 26587850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 486 - 665
Target Start/End: Complemental strand, 20306899 - 20306720
Alignment:
Q  486 ttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgttt-agtgaaaatgaaattttaatgttggatgaaattaa 584  Q
    |||| ||||| ||||  ||||||| |||||| ||||||||||||| ||||||| |||||| ||| ||||||||| ||||| ||||||||| |||||||||    
T  20306899 ttttacattttttacctaatagaaatactttttgtccacattttttatttggtatatgtttttttagtgaaaataaaattgtaatgttggttgaaattaa 20306800  T
Q  585 aaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattg 665  Q
    ||| ||||| | ||| |||| | ||| |||||||||||||  |||||| |||| |||||| | |||||||| |||||||||    
T  20306799 aaatattgttgaaaacattgttgaaaatatgttgtgtttttacttttt-aactcgattttcaagttggaaataaaaaattg 20306720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 245 - 338
Target Start/End: Complemental strand, 7697845 - 7697752
Alignment:
Q  245 atcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaa 338  Q
    |||| ||||||||||||| |||||||||||| |||||| ||||||| |||||||||||| |||||||||||| |||||| ||| ||||||||||    
T  7697845 atcatttttttactcaactgcatggtttgatctgatttgcggttttgattttaccaaccgaaccaaaccaaaccaaaccacaatataagaaaaa 7697752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 235 - 316
Target Start/End: Original strand, 27100132 - 27100213
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaa 316  Q
    ||||||||| |||||||||||||||||||| |||||||| |||| ||| ||||||| |||||||||||||||||||||||||    
T  27100132 atgtattcagatcacttttttactcaaccgtatggtttggtttggtttgcggttttgattttaccaaccaaaccaaaccaaa 27100213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 235 - 316
Target Start/End: Complemental strand, 27178171 - 27178090
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaa 316  Q
    ||||||||| |||||||||||||||||||| |||||||| |||| ||| ||||||| |||||||||||||||||||||||||    
T  27178171 atgtattcagatcacttttttactcaaccgtatggtttggtttggtttgcggttttgattttaccaaccaaaccaaaccaaa 27178090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 435 - 544
Target Start/End: Complemental strand, 49012392 - 49012283
Alignment:
Q  435 aaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatt 534  Q
    |||| ||||||| | | |||||||||||| ||||||||| |||||||  |||||| |||||||||||||||||||||||||| ||||||| |||||||||    
T  49012392 aaatatatttatgttctatttgaacttttcaagaatgataaaatcttgttcttttgcatttcttacaaaatagaattactttttgtccacgtttttaatt 49012293  T
Q  535 tggtctatgt 544  Q
    | ||| ||||    
T  49012292 tagtccatgt 49012283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 503 - 602
Target Start/End: Complemental strand, 27456614 - 27456515
Alignment:
Q  503 aatagaattactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatat 602  Q
    |||||||||||||| ||||||| ||||||| || || |||||||||| |||||||| ||||| |||||| | |||||| |||||||||||||||||||||    
T  27456614 aatagaattactttttgtccacgtttttaacttagtttatgttgtttggtgaaaataaaattgtaatgtggaatgaaactaaaaacattgtcggaaatat 27456515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 235 - 413
Target Start/End: Complemental strand, 26956390 - 26956221
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    |||||||| |||||||||||||||||||||| |||||||  | | |||   ||||||||||||||          |||| ||||||||| ||| ||||||    
T  26956390 atgtattcgaatcacttttttactcaaccgcgtggtttggatcggttt-gtgtttttattttacc----------aaccgaatcaaaccacaatataaga 26956302  T
Q  335 aaaaacactaattaa--atatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaatgacatatatttt 413  Q
    |||||||||||||||  |||||||| || |||||||||||||| ||||  |||| ||||||| ||||||||||||||||||    
T  26956301 aaaaacactaattaaatatatgtcagctacgccaatactcgtagaaacttaatgtaaacttttataaatgacatatatttt 26956221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 235 - 548
Target Start/End: Complemental strand, 30855651 - 30855325
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||| |||||||| ||| ||| |||||| ||||||||| |||| ||| ||||||| ||||||||||||||||||||| ||| |    || |||||||||    
T  30855651 atgtaatcaaatcattttcttattcaaccacatggtttggtttggtttgcggttttcattttaccaaccaaaccaaactaaagcg---cgtaacataaga 30855555  T
Q  335 aaaaacactaattaaa--tatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaa-tgacatatattttct--------------tc 417  Q
    ||||  | | ||||||  ||||||| || | ||||||||| ||||||| | | |||||  || ||||| |||||||| ||||||              ||    
T  30855554 aaaat-attgattaaacatatgtcacctacaccaatactcataaaaactctacgaaaatatttataaaatgacatattttttctctccttaagttctttc 30855456  T
Q  418 tttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttc 517  Q
    ||||| |||||||| ||||| |||||||| ||  | | ||||||||| |||||||| |||||||| | |||| ||||||| ||||||||  |||| |||     
T  30855455 tttgctttttattttaaaaacgtatttatgtgttactcgaacttttagagaatgataaaatcttaatgttttgcatttctcacaaaatatgattattttt 30855356  T
Q  518 tgtccacatttttaatttggtctatgttgtt 548  Q
    ||||  |||||||||||||||||||||||||    
T  30855355 tgtctgcatttttaatttggtctatgttgtt 30855325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 310 - 461
Target Start/End: Complemental strand, 26956326 - 26956159
Alignment:
Q  310 aaccaaatcaaaccgcaacataagaaaaaacactaattaaatat--gtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaatgacata 407  Q
    |||| ||||||||| ||| |||||||||||||||||||||||||  |||| || |||||||||||||| ||||  |||| ||||||| ||||||||||||    
T  26956326 aaccgaatcaaaccacaatataagaaaaaacactaattaaatatatgtcagctacgccaatactcgtagaaacttaatgtaaacttttataaatgacata 26956227  T
Q  408 tatttt--------------cttctttgccttttatttcaaaaatgtatttatatgcaatttgaactt 461  Q
    ||||||              ||||||| | |||||||| |||||||||||||||||| ||||||||||    
T  26956226 tatttttttttgttaagtttcttctttactttttatttgaaaaatgtatttatatgctatttgaactt 26956159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 411 - 564
Target Start/End: Complemental strand, 35495773 - 35495621
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    |||||||||||| ||| ||| ||| | | ||||||| ||| | ||||||||||| |||||||| |||||| | |||||| ||||||||  | ||||||||    
T  35495773 tttcttctttgcttttcattccaatatt-tatttatgtgctacttgaacttttacagaatgataaaatctcaatcttttacatttcttctagaatagaat 35495675  T
Q  511 tactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaatt 564  Q
     ||||| ||| ||| ||||| ||||| |||||||||||| ||||||||||||||    
T  35495674 aactttttgttcacgttttttatttgatctatgttgtttggtgaaaatgaaatt 35495621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 492 - 668
Target Start/End: Complemental strand, 47483907 - 47483732
Alignment:
Q  492 atttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacatt 591  Q
    |||||||||| |||| | || |||| ||| |||||||||||||| || ||| |||||| |||||||| ||||||||||||||||||||||| |||| |||    
T  47483907 atttcttacataatatacttgctttttgttcacatttttaatttcgtttatattgtttggtgaaaataaaattttaatgttggatgaaatttaaaatatt 47483808  T
Q  592 gtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtat 668  Q
    || ||||| || | |  || ||||||||| |     ||||| |||| ||||||||||||| ||||||||||| ||||    
T  47483807 gttggaaacatggttggaaatatgttgtg-taacaattttttaactcgattttaatgttgaaaacaaaaaatcgtat 47483732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 267 - 338
Target Start/End: Original strand, 8117838 - 8117909
Alignment:
Q  267 tggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaa 338  Q
    ||||||| |||| ||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8117838 tggtttggtttggtttgcagttttcattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaa 8117909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 458 - 592
Target Start/End: Original strand, 29211415 - 29211549
Alignment:
Q  458 acttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtttagtgaaaa 557  Q
    ||||||| | |||||| |||||| | | |||| ||||||||||  |||| | | | ||| ||||||| ||||||||||||| ||||||||||||||||||    
T  29211415 acttttagataatgataaaatctcaatattttacatttcttacgtaataaattaaatttttgtccacgtttttaatttggtttatgttgtttagtgaaaa 29211514  T
Q  558 tgaaattttaatgttggatgaaattaaaaacattg 592  Q
    ||||| | |||| | | ||||||||||||||||||    
T  29211515 tgaaaatgtaatttggaatgaaattaaaaacattg 29211549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 512 - 673
Target Start/End: Complemental strand, 29628370 - 29628212
Alignment:
Q  512 actttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaat 611  Q
    ||||| ||||||| ||||| |||| || |||||||||| |||  ||||||||| |||||| | ||||| ||||||||||||||| ||| |||||| |||     
T  29628370 actttttgtccacgttttttattttgtttatgttgtttcgtgggaatgaaattgtaatgtggaatgaa-ttaaaaacattgtcgaaaacattgctgaaaa 29628272  T
Q  612 tatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
     ||||  ||||||  |||||||| || | |||||||||||||||||||||||||||| ||||    
T  29628271 -atgtcatgttttacctttttaa-ctcggttttaatgttggaaacaaaaaattgtattgtct 29628212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 250 - 353
Target Start/End: Original strand, 10338073 - 10338180
Alignment:
Q  250 ttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaacc-----aaaccaaaccaaatcaaaccgcaacataagaaaaaacacta 344  Q
    |||||| ||||||||||||||||| || |||||  |||||| ||||||||||||     ||||||||| |||||||||||||| ||||| ||||||||||    
T  10338073 ttttttgctcaaccgcatggtttggttcgatttgtggttttgattttaccaaccgaactaaaccaaactaaatcaaaccgcaatataag-aaaaacacta 10338171  T
Q  345 attaaatat 353  Q
    |||||||||    
T  10338172 attaaatat 10338180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 424 - 548
Target Start/End: Complemental strand, 37375681 - 37375557
Alignment:
Q  424 ttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtcca 523  Q
    |||||||| |||||  |||||||  || | ||||| ||||| |||||||  ||||||||||||||| ||||||| ||||||||||||||  || ||||||    
T  37375681 ttttatttaaaaaacatatttatgcgctacttgaaattttagagaatgagaaaatcttagtcttttgcatttctaacaaaatagaattatattttgtcca 37375582  T
Q  524 catttttaatttggtctatgttgtt 548  Q
      ||||||| |||||||||||||||    
T  37375581 tgtttttaacttggtctatgttgtt 37375557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 411 - 541
Target Start/End: Original strand, 11834180 - 11834310
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatga-tgaaatcttagtcttttccatttcttacaaaatagaa 509  Q
    |||||||||||  |||| | |||||||| ||||||| ||| | ||||||| ||||||||||| | |||| ||||||||||  |||||||||||||||  |    
T  11834180 tttcttctttgttttttctatcaaaaatatatttatgtgctacttgaactcttaaagaatgattaaaattttagtcttttgtatttcttacaaaatatga 11834279  T
Q  510 ttactttctgtccacatttttaatttggtcta 541  Q
    ||||||| |||||| | |||||||||||||||    
T  11834280 ttactttttgtccaga-ttttaatttggtcta 11834310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 151 - 310
Target Start/End: Original strand, 29211065 - 29211227
Alignment:
Q  151 agggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatcgaaa------ctgcaaaaagctgtatttggtttcgatatgtattcaa 244  Q
    |||||||| |||| |||||||||||||||||||| ||| |||| ||| ||||| |||      | ||||||| | | ||||||||| |||||  ||||      
T  29211065 agggtgttcaaaaccgaaccaatccaatagaaaa-ctgcaaaccgaaccaatccaaatcaaatccgcaaaaaaccgcatttggtttggatat--attcgg 29211161  T
Q  245 atcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaa 310  Q
    ||||||||||||||||||||||||||||| |||| ||| | |||||  ||||||||||||||||||    
T  29211162 atcacttttttactcaaccgcatggtttggtttggtttgcagttttacttttaccaaccaaaccaa 29211227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 235 - 353
Target Start/End: Complemental strand, 22299089 - 22298972
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    |||||||  ||||| ||||| ||||||| ||||| |||| || | ||| ||||||| |||||||||||| |||||||||||| ||| ||| || |||||     
T  22299089 atgtattagaatcattttttcactcaacagcatgatttggttcggtttgcggttttgattttaccaaccgaaccaaaccaaaccaatccgtaatataag- 22298991  T
Q  335 aaaaacactaattaaatat 353  Q
    |||||||||||||||||||    
T  22298990 aaaaacactaattaaatat 22298972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 411 - 549
Target Start/End: Complemental strand, 23729738 - 23729601
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    |||||||||||| |||||||||||||||||||| ||| || | ||||| |||||   |||| | |||||||||||||||  |||||||||||||||  ||    
T  23729738 tttcttctttgctttttatttcaaaaatgtattcatacgctacttgaatttttagtaaatgttaaaatcttagtcttttgtatttcttacaaaatatgat 23729639  T
Q  511 tactttctgtccacatttttaatttggtctatgttgttt 549  Q
    |||||| ||| |||  ||| ||||||||| |||| ||||    
T  23729638 tactttttgttcac-gtttaaatttggtccatgtagttt 23729601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 460 - 673
Target Start/End: Complemental strand, 33434429 - 33434226
Alignment:
Q  460 ttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtttagtgaaaatg 559  Q
    ||||| |||||||| ||||| || |||||| ||||| |||||||||||||||| ||| ||| ||  ||||||||||||||||||| ||    ||||||      
T  33434429 ttttatagaatgataaaatcatactcttttgcatttgttacaaaatagaattattttttgtgcatgtttttaatttggtctatgtagt----tgaaaa-- 33434336  T
Q  560 aaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggcttttta--aacttgattttaatgttggaaaca 657  Q
           | |||||||| ||||| |||||||||| ||||| ||| ||  ||  ||||||| |||| | ||||||  ||||||||||||||||||||||||    
T  33434335 ------cattgttggataaaatttaaaacattgtgggaaacattactcgaaacatgttgttttttaggtttttaataacttgattttaatgttggaaaca 33434242  T
Q  658 aaaaattgtatcgtct 673  Q
    || |||||||| ||||    
T  33434241 aataattgtattgtct 33434226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 483 - 592
Target Start/End: Original strand, 47646521 - 47646630
Alignment:
Q  483 gtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaatt 582  Q
    ||||||| ||||||||||| ||||| |||||||| ||||||  |||||| ||  |||| | |||||| |||||||| |||||||||||||||  ||||||    
T  47646521 gtcttttacatttcttacataataggattactttttgtccatgtttttatttccgtctgtattgtttggtgaaaataaaattttaatgttggtcgaaatt 47646620  T
Q  583 aaaaacattg 592  Q
     |||||||||    
T  47646621 taaaacattg 47646630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 601 - 673
Target Start/End: Original strand, 30079490 - 30079561
Alignment:
Q  601 attgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    |||||| ||| ||| ||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||    
T  30079490 attgctgaaaatatattgtgttttagctttttaag-ttgattttaatgttggaaacaaaaaattgtatcgtct 30079561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 460 - 548
Target Start/End: Complemental strand, 48643105 - 48643017
Alignment:
Q  460 ttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtt 548  Q
    ||||| |||||||| |||||||||||||||  |||||||||||||||  ||||| || ||||||  ||||||| |||||||||||||||    
T  48643105 ttttagagaatgataaaatcttagtcttttgtatttcttacaaaatatgattacgttttgtccatgtttttaacttggtctatgttgtt 48643017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 250 - 353
Target Start/End: Original strand, 8568088 - 8568190
Alignment:
Q  250 ttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaa 349  Q
    |||||| |||||||| |||||||   ||| ||| ||||||  ||||||||| || |||||||||||| |||||||||| ||||| |||||||||||||||    
T  8568088 tttttttctcaaccgaatggttttgcttggtttgcggtttaaattttaccagccgaaccaaaccaaaccaaaccgcaatataag-aaaaacactaattaa 8568186  T
Q  350 atat 353  Q
    ||||    
T  8568187 atat 8568190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 415 - 548
Target Start/End: Original strand, 8118001 - 8118134
Alignment:
Q  415 ttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattact 514  Q
    |||||||| |||||||||||||| |||||||| ||| | |||| |||||| | ||| || |||||||| ||||||  |||||||||||||||  ||||||    
T  8118001 ttctttgctttttatttcaaaaacgtatttatgtgctacttgatcttttagataat-ataaaatcttaatcttttgtatttcttacaaaatatgattact 8118099  T
Q  515 ttct-gtccacatttttaatttggtctatgttgtt 548  Q
    || | || ||  ||||||| |||||||||||||||    
T  8118100 tttttgttcatgtttttaacttggtctatgttgtt 8118134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 245 - 323
Target Start/End: Complemental strand, 37376313 - 37376235
Alignment:
Q  245 atcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaacc 323  Q
    |||| ||||||  ||||| ||||||||||||||| ||| ||||||| |||||||||||| |||||||||||| ||||||    
T  37376313 atcatttttttgttcaactgcatggtttgatttggtttgcggttttcattttaccaaccgaaccaaaccaaaccaaacc 37376235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 250 - 415
Target Start/End: Complemental strand, 27456866 - 27456704
Alignment:
Q  250 ttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaa 349  Q
    |||||| || |||||||| ||||| |||| ||| ||||||| ||||| |||||| ||||||||     |||||||||||||||| |||||||||||||||    
T  27456866 ttttttcctaaaccgcatagtttgctttggtttgcggttttcattttcccaaccgaaccaaac-----caaaccgcaacataag-aaaaacactaattaa 27456773  T
Q  350 a--tatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcat-aaatgacatatattttct 415  Q
    |  ||||||  ||   ||||||||| || |||| |||||||||||||  | ||||||||||| ||||||    
T  27456772 atctatgtctcctagaccaatactcatagaaactcaatgaaaacttttgtaaaatgacatattttttct 27456704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 350
Target Start/End: Original strand, 31011203 - 31011398
Alignment:
Q  153 ggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatc------gaaactgcaaaaagctgtatttggtttcgatatgtattcaaat 246  Q
    |||||| |||| |||||||||||||||||||||| | ||||  || ||||       ||||||||||||| |  |||||||||  |||  ||||||| ||    
T  31011203 ggtgttcaaaaccgaaccaatccaatagaaaaaccgcaaaccaaaccaattcaaactgaaactgcaaaaaaccttatttggttcggat--gtattcagat 31011300  T
Q  247 cacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaat 346  Q
    |  ||| |||||||||||| ||||||| |  | |||  ||||||||||||||||||||||| ||||     |||||||||||||||| ||||||||||||    
T  31011301 cgttttcttactcaaccgcgtggtttggtgcggtttgaggtttttattttaccaaccaaacgaaac-----caaaccgcaacataag-aaaaacactaat 31011394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 454 - 673
Target Start/End: Original strand, 6879856 - 6880073
Alignment:
Q  454 ttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgt------ 547  Q
    ||||| ||||| |||||||| |||||||||||||| | ||||||||||||||| ||||| ||| ||  ||| ||||||||||||| ||| ||||          
T  6879856 ttgaatttttagagaatgataaaatcttagtctttgc-atttcttacaaaataaaattattttttgcacacgtttttaatttggtttattttgttgggaa 6879954  T
Q  548 -----ttag-tgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgat 641  Q
         |||| |||||||  |||||||||||||||||||||| ||||||||||            | ||| |||||||||||||  |||||| ||||||||    
T  6879955 tattgttagatgaaaatttaattttaatgttggatgaaatttaaaacattgt------------tgaaaatatgttgtgttttaacttttt-aacttgat 6880041  T
Q  642 tttaatgttggaaacaaaaaattgtatcgtct 673  Q
    ||||| |||| |||||||||||||||| ||||    
T  6880042 tttaaggttgaaaacaaaaaattgtattgtct 6880073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 239 - 351
Target Start/End: Original strand, 19289557 - 19289668
Alignment:
Q  239 attcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaa 338  Q
    ||||| |||||||||||||| |||||||| ||||| ||  | || ||||||||||||||||||   |||| ||  ||| |||||| ||||||||| ||||    
T  19289557 attcagatcacttttttacttaaccgcattgtttggttcaacttccggtttttattttaccaattgaacctaagtaaaccaaaccacaacataag-aaaa 19289655  T
Q  339 acactaattaaat 351  Q
    |||||||||||||    
T  19289656 acactaattaaat 19289668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 634 - 753
Target Start/End: Complemental strand, 37375472 - 37375357
Alignment:
Q  634 aacttgattttaatgttggaaacaaaaaattgtatcgtctggtnnnnnnnnntgcaccaaccgatccaatccaaaaccgcattggtttgatttggttcgg 733  Q
    |||||||||||||||||||||||||||||||||||||| | |           |||||||||||| ||| || |||||||||||||||  ||||||||||    
T  37375472 aacttgattttaatgttggaaacaaaaaattgtatcgtatcg---aaaaaaccgcaccaaccgattcaa-cccaaaccgcattggtttagtttggttcgg 37375377  T
Q  734 attttattttaaaagtcaac 753  Q
    ||| |||||| |||||||||    
T  37375376 attctatttttaaagtcaac 37375357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 686 - 753
Target Start/End: Complemental strand, 23729487 - 23729421
Alignment:
Q  686 tgcaccaaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    ||||||||||||||||| ||||| ||| ||| ||||| |||||||| |||||||||||||||||||||    
T  23729487 tgcaccaaccgatccaaaccaaa-ccgtattagtttggtttggttcagattttattttaaaagtcaac 23729421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 411 - 506
Target Start/End: Original strand, 30079292 - 30079387
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaata 506  Q
    |||||||||||  |||||||| |||||  ||||||| ||| | || || ||||| |||| ||| ||||||||| ||||||||||||||||||||||    
T  30079292 tttcttctttgttttttatttaaaaaacatatttatgtgctacttaaaattttagagaaagataaaatcttagccttttccatttcttacaaaata 30079387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 415 - 545
Target Start/End: Original strand, 17493110 - 17493238
Alignment:
Q  415 ttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattact 514  Q
    ||||| || |||||||| |||||||| |||| | || | ||||||||||| |||||||| |||||| |  ||||| ||||||||||    ||| ||||||    
T  17493110 ttcttcgctttttatttaaaaaatgtgtttaga-gctacttgaacttttagagaatgataaaatctcaa-cttttacatttcttaccgtctaggattact 17493207  T
Q  515 ttctgtccacatttttaatttggtctatgtt 545  Q
    || ||||||| ||||||||||||||||||||    
T  17493208 ttttgtccacgtttttaatttggtctatgtt 17493238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 415 - 545
Target Start/End: Complemental strand, 17560104 - 17559976
Alignment:
Q  415 ttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattact 514  Q
    ||||| || |||||||| |||||||| |||| | || | ||||||||||| |||||||| |||||| |  ||||| ||||||||||    ||| ||||||    
T  17560104 ttcttcgctttttatttaaaaaatgtgtttaga-gctacttgaacttttagagaatgataaaatctcaa-cttttacatttcttaccgtctaggattact 17560007  T
Q  515 ttctgtccacatttttaatttggtctatgtt 545  Q
    || ||||||| ||||||||||||||||||||    
T  17560006 ttttgtccacgtttttaatttggtctatgtt 17559976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 691 - 752
Target Start/End: Original strand, 10338799 - 10338859
Alignment:
Q  691 caaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaa 752  Q
    |||||||||||||||||| ||| |||| |||| |||||||| ||||||||||||||||||||    
T  10338799 caaccgatccaatccaaa-ccgaattgatttggtttggttcagattttattttaaaagtcaa 10338859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 252 - 413
Target Start/End: Original strand, 26208834 - 26208992
Alignment:
Q  252 ttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaa-- 349  Q
    |||||||||||||||||||||| ||   |||  || |||||||||||||||||||| ||||     ||| ||||||| |||| |||||||||| ||||      
T  26208834 ttttactcaaccgcatggtttggttcagtttgtggattttattttaccaaccaaactaaac-----caagccgcaacgtaag-aaaaacactagttaaat 26208927  T
Q  350 atatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcat-aaatgacatatatttt 413  Q
    |||||||||||   ||||||||| || |||  ||| ||||||||| || ||||||||||||||||    
T  26208928 atatgtcatctaaaccaatactcatagaaaatcaacgaaaacttttataaaatgacatatatttt 26208992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 338
Target Start/End: Original strand, 30079034 - 30079218
Alignment:
Q  153 ggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaat------cgaaactgcaaaaagctgtatttggtttcgatatgtattcaaat 246  Q
    |||||| |||| |||||||||||||||||||||| | |||| ||||||||      ||||||  |||||| ||| || |||||  |||  ||| ||| ||    
T  30079034 ggtgttcaaaaccgaaccaatccaatagaaaaaccgcaaaccgaatcaattcaaaccgaaaccacaaaaaactgcatctggttcggat--gtaatcagat 30079131  T
Q  247 cacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaa 338  Q
     | ||| ||  |||||||||||||||| ||||     ||||||| | |||| ||||| |||||||||||| |||||||||||||||||||||    
T  30079132 tattttcttgttcaaccgcatggtttggtttg-----cggttttcagtttagcaaccgaaccaaaccaaaccaaaccgcaacataagaaaaa 30079218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 250 - 353
Target Start/End: Original strand, 22700880 - 22700981
Alignment:
Q  250 ttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaa 349  Q
    |||||||||||| || |||||||| || | ||| || |||||||||||||||   ||||||| |||| ||||| ||||||||  |||||||| |||||||    
T  22700880 ttttttactcaatcgtatggtttggttcggtttgcgatttttattttaccaatagaaccaaatcaaaccaaactgcaacata--aaaaaacaataattaa 22700977  T
Q  350 atat 353  Q
    ||||    
T  22700978 atat 22700981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 440 - 544
Target Start/End: Original strand, 22701082 - 22701185
Alignment:
Q  440 tatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtc 539  Q
    ||||||| ||| | || |||||||| ||||| || |||||||| |||||| ||||||||| ||||||  |||||||| ||| ||| ||||| ||||||||    
T  22701082 tatttatctgctacttaaacttttagagaataataaaatcttattcttttgcatttctta-aaaatatgattactttttgtgcacgttttttatttggtc 22701180  T
Q  540 tatgt 544  Q
    |||||    
T  22701181 tatgt 22701185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 687 - 753
Target Start/End: Original strand, 8568533 - 8568603
Alignment:
Q  687 gcaccaaccgatccaatccaaaaccgcattggtttgatttg-----gttcggattttattttaaaagtcaac 753  Q
    |||||||||||||||||||||| ||||||| |||||||||      ||||||||||||||||||||||||||    
T  8568533 gcaccaaccgatccaatccaaa-ccgcattagtttgatttcatttagttcggattttattttaaaagtcaac 8568603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 713 - 752
Target Start/End: Complemental strand, 20306684 - 20306645
Alignment:
Q  713 cattggtttgatttggttcggattttattttaaaagtcaa 752  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  20306684 cattggtttggtttggttcggattttattttaaaagtcaa 20306645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 305 - 415
Target Start/End: Complemental strand, 20335081 - 20334969
Alignment:
Q  305 aaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaa--tatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaa-t 401  Q
    ||||||||||||||||||| ||| ||||| ||||||||||||||||  ||| ||| ||   ||||||||| || |||  ||||||||||||| ||||| |    
T  20335081 aaccaaaccaaatcaaaccacaatataag-aaaaacactaattaaatgtatatcacctagaccaatactcatagaaattcaatgaaaactttaataaatt 20334983  T
Q  402 gacatatattttct 415  Q
    ||||||| ||||||    
T  20334982 gacatattttttct 20334969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 425 - 475
Target Start/End: Original strand, 26524596 - 26524646
Alignment:
Q  425 tttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatga 475  Q
    |||||||||||||||| ||||| ||| |||||| |||||||||||||||||    
T  26524596 tttatttcaaaaatgtttttatgtgctatttgatcttttaaagaatgatga 26524646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 715 - 753
Target Start/End: Original strand, 35820098 - 35820136
Alignment:
Q  715 ttggtttgatttggttcggattttattttaaaagtcaac 753  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  35820098 ttggtttggtttggttcggattttattttaaaagtcaac 35820136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 353
Target Start/End: Complemental strand, 1813016 - 1812921
Alignment:
Q  252 ttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaat 351  Q
    |||||||||||||||| ||||| ||   ||| ||||||| ||||||||||||||||  |||     |||||||||| |||| ||||||||||||||||||    
T  1813016 ttttactcaaccgcatagtttggttcagtttgcggttttgattttaccaaccaaacggaac-----caaaccgcaatataa-aaaaaacactaattaaat 1812923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 460 - 545
Target Start/End: Complemental strand, 32237984 - 32237899
Alignment:
Q  460 ttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgtt 545  Q
    ||||| |||||||| ||| |||| |||||| || || ||||| ||||  ||||| || ||||||| ||||||||||||||||||||    
T  32237984 ttttagagaatgataaaagcttaatcttttgcaatttttacataatatgattacattttgtccacgtttttaatttggtctatgtt 32237899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 305 - 338
Target Start/End: Complemental strand, 38903314 - 38903281
Alignment:
Q  305 aaccaaaccaaatcaaaccgcaacataagaaaaa 338  Q
    ||||||||||||||||||||||||||||||||||    
T  38903314 aaccaaaccaaatcaaaccgcaacataagaaaaa 38903281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 596 - 668
Target Start/End: Original strand, 2308002 - 2308073
Alignment:
Q  596 gaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtat 668  Q
    |||||||||||| || ||||||||||| |  ||||||||  | ||||||||||||| ||||||||||||||||    
T  2308002 gaaatattgctagaaatatgttgtgttataactttttaat-tcgattttaatgttgcaaacaaaaaattgtat 2308073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 597 - 673
Target Start/End: Original strand, 4153620 - 4153695
Alignment:
Q  597 aaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    |||||||||| ||| |||||||| |||  ||| |||||  | |||||||||||||||||||||||||||| ||||||    
T  4153620 aaatattgctgaaaatatgttgtatttatgctctttaat-tggattttaatgttggaaacaaaaaattgtgtcgtct 4153695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 686 - 753
Target Start/End: Complemental strand, 7697388 - 7697317
Alignment:
Q  686 tgcaccaaccgatccaatccaaaaccgcattggtttgatttggtt-----cggattttattttaaaagtcaac 753  Q
    |||||||||||||| |||||||| ||||||||||||| |||||||     ||||||||||||||||| |||||    
T  7697388 tgcaccaaccgatcaaatccaaa-ccgcattggtttggtttggtttgatccggattttattttaaaattcaac 7697317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 250 - 313
Target Start/End: Complemental strand, 32669770 - 32669706
Alignment:
Q  250 ttttttactcaaccgcatggtttgatttgatttacgg-tttttattttaccaaccaaaccaaacc 313  Q
    |||||||||||||||||||||||  ||| ||||| || ||||||||||| ||||| |||||||||    
T  32669770 ttttttactcaaccgcatggtttagtttaatttatggttttttattttatcaaccgaaccaaacc 32669706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 313
Target Start/End: Original strand, 11833963 - 11834075
Alignment:
Q  200 aatcgaaactgcaaaaagctgtatttggtttcgatatgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttacc 299  Q
    ||||||||| |||||||| || ||||||||  |||  ||||||| ||||  |||||||||||| ||||| |||| || | |||  |||||| ||||||||    
T  11833963 aatcgaaaccgcaaaaagttgcatttggttcggat--gtattcatatcatgtttttactcaactgcatgatttggttcggtttgtggttttgattttacc 11834060  T
Q  300 -aaccaaaccaaacc 313  Q
     ||||||||||||||    
T  11834061 aaaccaaaccaaacc 11834075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 664
Target Start/End: Original strand, 23707051 - 23707086
Alignment:
Q  629 ttttaaacttgattttaatgttggaaacaaaaaatt 664  Q
    |||| |||||||||||||||||||||||||||||||    
T  23707051 tttttaacttgattttaatgttggaaacaaaaaatt 23707086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 540 - 603
Target Start/End: Original strand, 32941937 - 32942000
Alignment:
Q  540 tatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatatt 603  Q
    |||||||||| |||||||||| | | |||||| | ||||||||||||||||||| | |||||||    
T  32941937 tatgttgtttggtgaaaatgagaatgtaatgtggaatgaaattaaaaacattgttgaaaatatt 32942000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 687 - 753
Target Start/End: Complemental strand, 40848954 - 40848884
Alignment:
Q  687 gcaccaaccgatccaatccaaaaccgcattggtttg-----atttggttcggattttattttaaaagtcaac 753  Q
    |||||||||||| ||| ||||| ||||||| |||||     |||||||||||||||||||||||||||||||    
T  40848954 gcaccaaccgattcaacccaaa-ccgcattagtttggttttatttggttcggattttattttaaaagtcaac 40848884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 551 - 602
Target Start/End: Complemental strand, 41459390 - 41459339
Alignment:
Q  551 gtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatat 602  Q
    |||||||||||||| ||||||  |||||||||||||| ||||| ||||||||    
T  41459390 gtgaaaatgaaattgtaatgtgagatgaaattaaaaatattgttggaaatat 41459339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 250 - 312
Target Start/End: Original strand, 16496857 - 16496919
Alignment:
Q  250 ttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaac 312  Q
    |||||||||||||| ||||||||| |||| ||| |   |||||||||| ||||||||||||||    
T  16496857 ttttttactcaaccacatggtttggtttggtttgcaacttttattttatcaaccaaaccaaac 16496919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 552 - 602
Target Start/End: Original strand, 16535617 - 16535667
Alignment:
Q  552 tgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatat 602  Q
    ||||||||||||| |||| |||||||||||| |||||||||| | ||||||    
T  16535617 tgaaaatgaaattgtaattttggatgaaatttaaaacattgttgaaaatat 16535667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 552 - 602
Target Start/End: Complemental strand, 16630045 - 16629995
Alignment:
Q  552 tgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatat 602  Q
    ||||||||||||| |||| |||||||||||| |||||||||| | ||||||    
T  16630045 tgaaaatgaaattgtaattttggatgaaatttaaaacattgttgaaaatat 16629995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 552 - 586
Target Start/End: Original strand, 31012925 - 31012959
Alignment:
Q  552 tgaaaatgaaattttaatgttggatgaaattaaaa 586  Q
    |||||||||||||||||||||||||||| ||||||    
T  31012925 tgaaaatgaaattttaatgttggatgaatttaaaa 31012959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 715 - 753
Target Start/End: Original strand, 32942090 - 32942128
Alignment:
Q  715 ttggtttgatttggttcggattttattttaaaagtcaac 753  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  32942090 ttggtttggtttggttcggattgtattttaaaagtcaac 32942128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 433 - 529
Target Start/End: Original strand, 8568293 - 8568390
Alignment:
Q  433 aaaaatgtatttatatgcaatttgaacttttaaagaatga-tgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttt 529  Q
    |||||||||||||| | ||| | ||||||||| ||||||| | |||| | ||||||||  |||||||||||||||  |||||||| || |||| ||||    
T  8568293 aaaaatgtatttatgtacaactagaacttttagagaatgattaaaatttcagtcttttgtatttcttacaaaataagattactttttgcccacgtttt 8568390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 433 - 529
Target Start/End: Original strand, 10338545 - 10338642
Alignment:
Q  433 aaaaatgtatttatatgcaatttgaacttttaaagaatga-tgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttt 529  Q
    |||||||||||||| ||| | ||||||| ||| ||||| | | |||| ||||||||||  || ||||||||||||  |||||||| ||||||| ||||    
T  10338545 aaaaatgtatttatgtgctacttgaactcttagagaataactaaaattttagtcttttgtatctcttacaaaatatgattactttttgtccacgtttt 10338642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 601
Target Start/End: Complemental strand, 16359375 - 16359326
Alignment:
Q  552 tgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaata 601  Q
    ||||||||||||| ||||||||||| ||||| |||||||||  |||||||    
T  16359375 tgaaaatgaaattataatgttggataaaatttaaaacattgcaggaaata 16359326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 724 - 753
Target Start/End: Original strand, 16535763 - 16535792
Alignment:
Q  724 tttggttcggattttattttaaaagtcaac 753  Q
    ||||||||||||||||||||||||||||||    
T  16535763 tttggttcggattttattttaaaagtcaac 16535792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 724 - 753
Target Start/End: Complemental strand, 16629899 - 16629870
Alignment:
Q  724 tttggttcggattttattttaaaagtcaac 753  Q
    ||||||||||||||||||||||||||||||    
T  16629899 tttggttcggattttattttaaaagtcaac 16629870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 601 - 662
Target Start/End: Complemental strand, 20334760 - 20334700
Alignment:
Q  601 attgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaa 662  Q
    |||||| ||||||||||| |||||  ||||| ||  ||||||||||||||||||||||||||    
T  20334760 attgctgaaattatgttgggttttaacttttcaat-ttgattttaatgttggaaacaaaaaa 20334700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 707 - 752
Target Start/End: Original strand, 22701323 - 22701368
Alignment:
Q  707 aaaccgcattggtttgatttggttcggattttattttaaaagtcaa 752  Q
    |||||| ||||||||| ||||||||| ||||| |||||||||||||    
T  22701323 aaaccgtattggtttggtttggttcgaattttcttttaaaagtcaa 22701368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 712 - 753
Target Start/End: Complemental strand, 34751062 - 34751021
Alignment:
Q  712 gcattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    ||||||||||| |||| ||||||||||||||||||| |||||    
T  34751062 gcattggtttggtttgattcggattttattttaaaaatcaac 34751021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 269 - 338
Target Start/End: Complemental strand, 36550989 - 36550920
Alignment:
Q  269 gtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaa 338  Q
    ||||| |||| | |||||||||||||||| ||| ||||||||| ||||| |||  | |||||||||||||    
T  36550989 gtttggtttggtatacggtttttattttatcaatcaaaccaaaacaaattaaattgtaacataagaaaaa 36550920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 688 - 753
Target Start/End: Complemental strand, 43202525 - 43202462
Alignment:
Q  688 caccaaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    |||||||||||| |||||||| || |||||||||| |||| ||| |||| ||||||||||||||||    
T  43202525 caccaaccgatc-aatccaaa-ccacattggtttggtttgattcagattgtattttaaaagtcaac 43202462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 159; Significance: 3e-84; HSPs: 93)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 411 - 673
Target Start/End: Original strand, 10847243 - 10847504
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    |||||||||||| ||||||||||||||||||||||  ||| |||||||||||| || |||||| ||||||||||||||| ||||||||||  ||||||||    
T  10847243 tttcttctttgctttttatttcaaaaatgtatttacgtgctatttgaacttttcaaaaatgataaaatcttagtcttttacatttcttacgtaatagaat 10847342  T
Q  511 tactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaa 610  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||||||||||||||||||| |||| | |||    
T  10847343 tactttttgtccacatttttaatttggtctatgttgttttgtgaaaatgaaattgttatgttgaatgaaattaaaaacattgtcggaaacattgttgaaa 10847442  T
Q  611 ttatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
     |||||||||||||  ||||||||  ||| |||||||||||||||||||||||||||| ||||    
T  10847443 atatgttgtgttttaactttttaattttg-ttttaatgttggaaacaaaaaattgtattgtct 10847504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 283 - 676
Target Start/End: Complemental strand, 8269156 - 8268748
Alignment:
Q  283 acggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaatatgt--catctgcgccaatactcgtaaaaac 380  Q
    ||||||||||||||| ||||| ||||||||||||| ||||||||||| |||||||| || ||||||||||| |  |||||   |||||| |  || ||||    
T  8269156 acggtttttattttatcaaccgaaccaaaccaaataaaaccgcaacacaagaaaaa-cattaattaaatatatatcatctagaccaatatttatataaac 8269058  T
Q  381 ccaatgaaaactttcataaa-tgacatatattttctt--------------ctttgcctttt-atttcaaaaatgtatttatatgcaatttgaactttta 464  Q
     ||||| ||||||| ||||| ||||||||||||||||              |||||  |||| ||||||||  | ||| ||| ||| || ||||||||||    
T  8269057 tcaatggaaacttttataaaatgacatatattttcttttgttaagtttcttctttgattttttatttcaaac-tatatatatgtgctatatgaactttta 8268959  T
Q  465 aagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaatt 564  Q
    |||||||| |||||||||||||||| ||||||||| ||||| |||||||||| |||||||||||||||||||||||||| ||||||| |||||| || ||    
T  8268958 aagaatgaagaaatcttagtcttttgcatttcttaaaaaatggaattactttttgtccacatttttaatttggtctatgatgtttagcgaaaattaattt 8268859  T
Q  565 ttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaatt 664  Q
     |||||||||||||||||||||||||||||||||| ||| ||  || ||||||||||||| ||||||| |||||||||||||||||| ||||||||||||    
T  8268858 gtaatgttggatgaaattaaaaacattgtcggaaacattactggaaatatgttgtgttttagcttttt-aacttgattttaatgttgtaaacaaaaaatt 8268760  T
Q  665 gtatcgtctggt 676  Q
    | || |||||||    
T  8268759 gcattgtctggt 8268748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 245 - 673
Target Start/End: Original strand, 35992132 - 35992573
Alignment:
Q  245 atcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacacta 344  Q
    ||||||||||| ||||| ||||||||||| |||| ||| | |||||  |||||||||||||||||||||||| ||||| |||||||||||| || |||||    
T  35992132 atcacttttttcctcaatcgcatggtttggtttggtttgcagttttctttttaccaaccaaaccaaaccaaaccaaactgcaacataagaagaa-cacta 35992230  T
Q  345 attaaat--atgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaatgacatatattttct--------------tctttgcctttta 428  Q
    |||||||  |||||| ||   | |||||||  | ||||  |||| ||||||| ||||||||||||| ||||||              ||||| | |||||    
T  35992231 attaaatctatgtcacctagacaaatactcaaagaaacttaatggaaacttttataaatgacatattttttctcttgttaagtttcttctttacttttta 35992330  T
Q  429 tttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacattt 528  Q
    ||||||||  |||||||| ||| | ||||||||||| ||||| || ||||||||||||||| ||||||||||| ||||||||||| || ||||||| |||    
T  35992331 tttcaaaatggtatttatgtgctacttgaacttttagagaataataaaatcttagtcttttacatttcttacataatagaattacgttttgtccacgttt 35992430  T
Q  529 ttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggct 628  Q
    |||||||||| |||||||||| ||| |||||||||| |||||| | ||| ||||||||||||||||| ||| |||| | ||| |||||  ||||||  ||    
T  35992431 ttaatttggtttatgttgtttggtggaaatgaaattgtaatgtggaatg-aattaaaaacattgtcgaaaacattgttgaaaatatgtcttgttttacct 35992529  T
Q  629 ttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||    
T  35992530 tttt-aacttgattttaatgttggaagcaaaaaattgtattgtct 35992573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 245 - 673
Target Start/End: Original strand, 35979819 - 35980250
Alignment:
Q  245 atcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacacta 344  Q
    ||||||||||| |||||| |||||||||| |||| ||| |||||||  |||||||||||||||||||||          ||||||||||||||| |||||    
T  35979819 atcacttttttcctcaacagcatggtttggtttggtttgcggttttctttttaccaaccaaaccaaacc----------gcaacataagaaaaa-cacta 35979907  T
Q  345 attaaat--atgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaatgacatatattttc--------------ttctttgcctttta 428  Q
    |||||||  |||||| ||   | ||||||| || |||| ||||| ||||||| ||||||||||||| |||||              |||||||| |||||    
T  35979908 attaaatctatgtcacctagacaaatactcatagaaactcaatggaaacttttataaatgacatattttttctcttgttaagtttcttctttgcttttta 35980007  T
Q  429 tttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacattt 528  Q
    ||||||||  |||||||| ||| | ||||||||||| ||||| || |||| ||| |||||| ||||||||||| ||||||||||| || ||||||| |||    
T  35980008 tttcaaaatggtatttatgtgctacttgaacttttagagaataataaaatattaatcttttacatttcttacataatagaattacgttttgtccacgttt 35980107  T
Q  529 ttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggct 628  Q
    |||||||||| |||||||||| ||| |||||||||| |||||| | ||| ||||||||||||||||| ||| |||||| ||| ||||| || ||||  ||    
T  35980108 ttaatttggtttatgttgtttggtggaaatgaaattgtaatgtggaatg-aattaaaaacattgtcgaaaacattgctgaaaatatgtcgttttttacct 35980206  T
Q  629 ttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||    
T  35980207 tttt-aacttgattttaatgttggaaacaaaaaattgtattgtct 35980250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 246 - 664
Target Start/End: Original strand, 36202983 - 36203400
Alignment:
Q  246 tcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaa 345  Q
    |||| ||||||||||||||||||||||| |||| ||| ||| ||| |||||||||||| ||||| |||||| ||||||||||||||| ||||| ||||||    
T  36202983 tcacatttttactcaaccgcatggtttggtttggtttgcggctttcattttaccaaccgaaccataccaaaccaaaccgcaacataataaaaa-cactaa 36203081  T
Q  346 ttaaa---tatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaa-tgacatatat--------------tttcttctttgcctttt 427  Q
    |||||   ||||||| ||   ||||||||  || |||| ||||| ||||||| ||||| |||||||| |              |||||||||||| ||||    
T  36203082 ttaaaatctatgtcacctagaccaatactaatagaaactcaatggaaacttttataaaatgacatatttgttctcttgttaagtttcttctttgcttttt 36203181  T
Q  428 atttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatt 527  Q
    ||||||||||||||||||| ||| | ||||||||||| |||||||| ||||||| || |||| ||||||||||| ||||||||||            |||    
T  36203182 atttcaaaaatgtatttatgtgctacttgaacttttatagaatgataaaatcttggtattttacatttcttacataatagaatta------------att 36203269  T
Q  528 tttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggc 627  Q
    ||| |||||||||||||||||| |||||||||||     |||||   ||||||||||||| ||||||||||||||| || ||| |||||||||||||  |    
T  36203270 ttttatttggtctatgttgtttggtgaaaatgaa-----aatgtgaaatgaaattaaaaatattgtcggaaatattactgaaaatatgttgtgtttttac 36203364  T
Q  628 tttttaaacttgattttaatgttggaaacaaaaaatt 664  Q
     |||| |||| || |||||||||||||||||||||||    
T  36203365 gtttttaactcga-tttaatgttggaaacaaaaaatt 36203400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 411 - 602
Target Start/End: Complemental strand, 17652112 - 17651922
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    |||||||||||  ||||||||||||||||||||| | ||| | ||||||||||| ||||| || ||||||||||||||| ||||||||||| | || |||    
T  17652112 tttcttctttgttttttatttcaaaaatgtatttttgtgctacttgaacttttagagaataataaaatcttagtcttttacatttcttacatagtataat 17652013  T
Q  511 tactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatat 602  Q
    |||||| ||||||||||||||||||||| |||||||||||||| |||||||||| ||||| ||||  |||||||||||||||| ||||||||    
T  17652012 tactttttgtccacatttttaatttggtttatgttgtttagtggaaatgaaattgtaatg-tggaataaattaaaaacattgttggaaatat 17651922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 454 - 651
Target Start/End: Original strand, 29923069 - 29923264
Alignment:
Q  454 ttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtttagtg 553  Q
    |||||||||||||||||||| |||||||| | |||| ||||||||||| | |||||||| ||| | ||||| |||||||||| ||||||||||||| |||    
T  29923069 ttgaacttttaaagaatgataaaatcttaatattttacatttcttacata-tagaattaatttttctccacgtttttaatttagtctatgttgtttggtg 29923167  T
Q  554 aaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttg 651  Q
    ||||| ||||| ||||||||||| ||||| |||||||||||||||| ||||||  || |||| |||||||| | ||||| |||| |||||||| ||||    
T  29923168 aaaataaaattgtaatgttggattaaattcaaaacattgtcggaaacattgctggaaatatgctgtgttttag-ttttttaactcgattttaaggttg 29923264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 234 - 602
Target Start/End: Complemental strand, 17989599 - 17989220
Alignment:
Q  234 tatgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataag 333  Q
    |||||||||| ||||||||||||||||||| ||| ||||| |||| |||||||| || ||||||| |||||||||| ||     || |||||||||||||    
T  17989599 tatgtattcatatcacttttttactcaaccacatagtttggtttggtttacggtattcattttacgaaccaaaccatac-----cagaccgcaacataag 17989505  T
Q  334 aaaaaacactaattaaa--tatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcat-aaatgacatat--------------attttctt 416  Q
     ||||||  ||||||||  ||||||| ||   ||||||| | || |||| ||||| ||||||| || ||||||| | |              | ||||||    
T  17989504 -aaaaactttaattaaatctatgtcacctagaccaatacacatagaaactcaatggaaacttttataaaatgactttttttttttcttgctaagtttctt 17989406  T
Q  417 ctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattacttt 516  Q
    |||| | ||||||||||||||| ||||||| ||| | ||||||||||| |||||||| | |||||| ||||||  |||||||||| ||||||||||||||    
T  17989405 cttttctttttatttcaaaaatatatttatgtgctacttgaacttttatagaatgataacatcttaatcttttatatttcttacataatagaattacttt 17989306  T
Q  517 ctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatat 602  Q
     ||||||| ||||||||||||| |||||||||  |||||||||||||  |||| |   ||||||||| ||||||||| | ||||||    
T  17989305 gtgtccacgtttttaatttggtttatgttgttgggtgaaaatgaaatactaatatgaaatgaaattataaacattgttgaaaatat 17989220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 411 - 602
Target Start/End: Original strand, 50951754 - 50951945
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    |||||||||||| |||||||||||||||||| |||| ||| | ||||| ||||| | ||||||||||   ||||||||| ||||||||||| ||||  ||    
T  50951754 tttcttctttgctttttatttcaaaaatgtaattatgtgctacttgaaattttatataatgatgaaaatatagtcttttacatttcttacataataagat 50951853  T
Q  511 tactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatat 602  Q
    |||||| |||||||||||||||||| |||||| |||||| |||||||| ||||| ||||||  | ||||||| |||||||||| ||| ||||    
T  50951854 tactttttgtccacatttttaatttcgtctatattgtttggtgaaaataaaattgtaatgtcagttgaaatttaaaacattgttggatatat 50951945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 411 - 753
Target Start/End: Complemental strand, 17989411 - 17989080
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    |||||||||| | ||||||||||||||| ||||||| ||| | ||||||||||| |||||||| | |||||| ||||||  |||||||||| ||||||||    
T  17989411 tttcttcttttctttttatttcaaaaatatatttatgtgctacttgaacttttatagaatgataacatcttaatcttttatatttcttacataatagaat 17989312  T
Q  511 tactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaa 610  Q
    |||||| ||||||| ||||||||||||| |||||||||  |||||||||||||  |||| |   ||||||||| ||||||||| | ||||||            
T  17989311 tactttgtgtccacgtttttaatttggtttatgttgttgggtgaaaatgaaatactaatatgaaatgaaattataaacattgttgaaaatat-------- 17989220  T
Q  611 ttatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtctggtnnnnnnnnntgcaccaaccgatccaatccaaaac 710  Q
        ||||||||||  |||||||| ||  |||||||||||| ||||||||| || ||| |||| |           |||||||| ||||||| |||||||    
T  17989219 ----gttgtgttttacctttttaa-ctccattttaatgttgaaaacaaaaatttctattgtctcgaaaaaaac---gcaccaacagatccaacccaaaac 17989128  T
Q  711 cgcattggtttgat-----ttggttcggattttattttaaaagtcaac 753  Q
    ||||||| |||| |     |||||||||||||||||||||||||||||    
T  17989127 cgcattgatttggtttaggttggttcggattttattttaaaagtcaac 17989080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 427 - 661
Target Start/End: Original strand, 32937798 - 32938044
Alignment:
Q  427 tatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacat 526  Q
    ||||| |||| | ||||||| ||| | |||||| |||| |||||||| |||| |||||| ||| ||||||||||| ||||| ||||||||  ||||||||    
T  32937798 tattttaaaattttatttatgtgctacttgaacatttagagaatgataaaattttagtcctttacatttcttacataataggattacttttcgtccacat 32937897  T
Q  527 ttttaatttggtctatgttgtttag-------------tgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaatta 613  Q
    | |||||||||||| | || ||| |             ||||||||||||||||||||||||||||||  |||||| | || |||| |||||| ||| ||    
T  32937898 tcttaatttggtctctattattttgaaacattgttggatgaaaatgaaattttaatgttggatgaaatataaaacactatcagaaacattgcttaaaata 32937997  T
Q  614 tgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaa 661  Q
    ||||||||||| ||||||| |||||||||||||||| |||||||||||    
T  32937998 tgttgtgttttagcttttt-aacttgattttaatgtaggaaacaaaaa 32938044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 407 - 673
Target Start/End: Complemental strand, 24630337 - 24630071
Alignment:
Q  407 atattttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaata 506  Q
    ||||||| |||||||| ||| |||| |||||||||||||| ||||||||||| ||||| |||||||| ||||||||||| |||  |||||||| | || |    
T  24630337 atatttttttctttgcttttaatttgaaaaatgtatttatgtgcaatttgaaattttacagaatgat-aaatcttagtcgtttatatttcttaaacaaca 24630239  T
Q  507 gaattac--tttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattg 604  Q
    |  ||||  ||| | ||||  |||||||||| |||||| ||||||||||||||| ||| | | ||||| ||||||||| ||||| |||||||||| ||||    
T  24630238 gggttactttttttttccatgtttttaatttcgtctatattgtttagtgaaaataaaaatatcatgtttgatgaaatttaaaacgttgtcggaaacattg 24630139  T
Q  605 ctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
     |  || | || ||| || | |||||||  ||| ||||||||||||| ||| |||||||||||| ||||    
T  24630138 ttgtaaatgtgctgtattatagcttttt-gactcgattttaatgttgaaaataaaaaattgtattgtct 24630071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 411 - 602
Target Start/End: Complemental strand, 52829175 - 52828984
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    |||||||||||  |||||| |||||||| ||||||| | |   || || ||||| |||||||| |||||||||| |||| ||||||||||| |||| |||    
T  52829175 tttcttctttgttttttatctcaaaaatatatttatgtactccttaaaattttatagaatgataaaatcttagtattttacatttcttacataatataat 52829076  T
Q  511 tactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatat 602  Q
    ||||||  ||||| ||||||||||| || ||| | ||||  ||||||| ||||| ||||||| ||||||||| |||| ||||||||||||||    
T  52829075 tacttttcgtccatatttttaatttcgtttatatagtttgatgaaaataaaattgtaatgttagatgaaatttaaaatattgtcggaaatat 52828984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 250 - 415
Target Start/End: Original strand, 18834100 - 18834267
Alignment:
Q  250 ttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaa 349  Q
    ||||||||||||| ||||  ||||||||| |||  ||||||||||||||||||| ||||||| |||| |||||| ||||||||| |||||||||||||||    
T  18834100 ttttttactcaactgcatattttgatttggtttgaggtttttattttaccaaccgaaccaaatcaaaccaaaccacaacataag-aaaaacactaattaa 18834198  T
Q  350 --atatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcat-aaatgacatatattttct 415  Q
      |||||||| ||   ||||||||  ||||||| ||||||||||||| || ||||||||||| ||||||    
T  18834199 atatatgtcacctagaccaatactaataaaaactcaatgaaaacttttataaaatgacatattttttct 18834267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 433 - 601
Target Start/End: Original strand, 25865752 - 25865918
Alignment:
Q  433 aaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaa 532  Q
    |||||||||||||| ||| | ||||| | ||| |||||||| |||| |||||||||| |||||| || ||||||| |||||| | |||||| ||||||||    
T  25865752 aaaaatgtatttatgtgctacttgaaatgttagagaatgataaaattttagtctttttcatttcataaaaaataggattactctttgtccatatttttaa 25865851  T
Q  533 tttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaata 601  Q
    |||||||||  |||||   ||||||| ||||||||||||| ||||||||| |||||||||  |||||||    
T  25865852 tttggtcta--ttgttggatgaaaataaaattttaatgttagatgaaatttaaaacattgctggaaata 25865918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 235 - 353
Target Start/End: Original strand, 27507036 - 27507153
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||||||  |||| ||||||||||||||||||| |||| || | ||| ||||||| |||||||||||  |||||||||||| |||||||||| |||||     
T  27507036 atgtattcggatcatttttttactcaaccgcatgctttggttcggtttgcggttttgattttaccaactgaaccaaaccaaaccaaaccgcaatataag- 27507134  T
Q  335 aaaaacactaattaaatat 353  Q
    |||||||||||||||||||    
T  27507135 aaaaacactaattaaatat 27507153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 424 - 673
Target Start/End: Original strand, 32910099 - 32910341
Alignment:
Q  424 ttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtcca 523  Q
    |||||||| |||||  ||||||| ||| | ||||| ||||| |||||||  ||||||||||||||| ||||||||||||||||| ||||  || ||||||    
T  32910099 ttttatttaaaaaacatatttatgtgctacttgaaattttagagaatgagaaaatcttagtcttttgcatttcttacaaaataggattatgttttgtcca 32910198  T
Q  524 catttttaatttggtctatgttgtt-----tagtg-aaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgtt 617  Q
      ||||||| |||||||||||||||      | || ||||||||||| |||| ||  |||||||| ||||||||||            | ||| ||||||    
T  32910199 tgtttttaacttggtctatgttgttggaaacattgtaaaatgaaattgtaatatttaatgaaatttaaaacattgt------------tgaaaatatgtt 32910286  T
Q  618 gtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    ||||||   |||||| ||||||||||||||||||||||||||||||||||||||||    
T  32910287 gtgtttaaacttttt-aacttgattttaatgttggaaacaaaaaattgtatcgtct 32910341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 414 - 548
Target Start/End: Original strand, 8165262 - 8165395
Alignment:
Q  414 cttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattac 513  Q
    ||||||||| |||||||||||||| |||||||| ||| | ||||||| ||| | |||||| ||||||||||||||| ||||||||| ||||||  | |||    
T  8165262 cttctttgctttttatttcaaaaacgtatttatgtgctacttgaactcttagataatgataaaatcttagtctttt-catttcttaaaaaatatgaatac 8165360  T
Q  514 tttctgtccacatttttaatttggtctatgttgtt 548  Q
    ||| | ||||  ||||||| |||||||||||||||    
T  8165361 tttttttccaggtttttaacttggtctatgttgtt 8165395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 235 - 351
Target Start/End: Complemental strand, 17652286 - 17652166
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaac-----caaatcaaaccgcaaca 329  Q
    ||||||||  ||||||||||| ||||||||||||||||  ||||||||  |||||| |||||||||||| ||||||||     |||| ||||||||||||    
T  17652286 atgtattcggatcacttttttcctcaaccgcatggttttgtttgatttggggttttcattttaccaaccgaaccaaaccaaaccaaaccaaaccgcaaca 17652187  T
Q  330 taagaaaaaacactaattaaat 351  Q
    |||| |||||||||||||||||    
T  17652186 taag-aaaaacactaattaaat 17652166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 235 - 316
Target Start/End: Complemental strand, 35375722 - 35375641
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaa 316  Q
    ||||||||| |||| |||||||||||||||||||||||  |||| ||| |||||||||||||||||||| ||||||||||||    
T  35375722 atgtattcagatcatttttttactcaaccgcatggttttgtttggtttgcggtttttattttaccaacctaaccaaaccaaa 35375641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 415 - 548
Target Start/End: Complemental strand, 44056096 - 44055963
Alignment:
Q  415 ttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattact 514  Q
    |||||||| || |||||||||||||||||||| ||| | ||||||||||| | |||||| |||| | |||||||| ||||| ||| ||||||  ||||||    
T  44056096 ttctttgctttatatttcaaaaatgtatttatgtgctacttgaacttttagaaaatgataaaatttaagtcttttgcatttattagaaaataagattact 44055997  T
Q  515 ttctgtccacatttttaatttggtctatgttgtt 548  Q
    || | ||||| ||||||| || ||||||||||||    
T  44055996 ttttttccacgtttttaacttagtctatgttgtt 44055963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 424 - 592
Target Start/End: Complemental strand, 382407 - 382240
Alignment:
Q  424 ttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtcca 523  Q
    |||||||| ||||||||||| || |    ||||||||| || |||| ||| |||| |||||| ||| |||||||||||  |||  |||||||| |||||     
T  382407 ttttattttaaaaatgtattcatgtaatgtttgaacttatacagaacgataaaattttagtcatttacatttcttacagtatatgattactttttgtccg 382308  T
Q  524 catttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattg 592  Q
    ||||||||||| ||||||||||| || || |||| |||||| ||||||| ||||||||| |||||||||    
T  382307 catttttaattcggtctatgttg-ttggtaaaaacgaaattgtaatgtttgatgaaatttaaaacattg 382240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 415 - 664
Target Start/End: Complemental strand, 25507240 - 25506981
Alignment:
Q  415 ttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattact 514  Q
    |||||||  ||||||||| ||||| ||||||| ||| | ||||||||||| |  ||||| |||| ||| |||||| ||||||||||||||||  ||||||    
T  25507240 ttctttgttttttatttctaaaatatatttatgtgctacttgaacttttagacgatgataaaatattaatcttttgcatttcttacaaaatatgattact 25507141  T
Q  515 ttctgtccacatttttaatttggtctatgttgtttag------------tgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatat 602  Q
    || | ||||| ||||| |||| || ||||||||||||            ||||||| ||||| ||||||||||| ||||| |||||||||| | ||| ||    
T  25507140 ttttatccac-tttttcatttagtttatgttgtttagaactttgttggatgaaaataaaattgtaatgttggataaaatttaaaacattgttgaaaacat 25507042  T
Q  603 tgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaatt 664  Q
    |  |  || |||||| |||||| ||||||| |||||||||||||  ||| ||||||||||||    
T  25507041 tagtggaaatatgttttgttttagcttttt-aacttgattttaactttgaaaacaaaaaatt 25506981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 235 - 353
Target Start/End: Complemental strand, 12974128 - 12974009
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacat-aag 333  Q
    ||||||||| |||| |||||||||||||  ||||||||| || | ||| | ||||| |||||||||||| |||||||||||| |||||||||| || ||     
T  12974128 atgtattcagatcaattttttactcaacaacatggtttggttcggtttgctgttttgattttaccaaccgaaccaaaccaaaccaaaccgcaatataaat 12974029  T
Q  334 aaaaaacactaattaaatat 353  Q
    ||||| ||||||||||||||    
T  12974028 aaaaatcactaattaaatat 12974009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 415 - 548
Target Start/End: Original strand, 11073090 - 11073223
Alignment:
Q  415 ttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattact 514  Q
    |||||| | |||||||| ||||| |||||||| ||| | || || ||||| |||||||| | ||||||||||||| ||||||||||||||||| ||| |     
T  11073090 ttctttactttttatttaaaaaacgtatttatgtgctacttcaaattttagagaatgataacatcttagtcttttgcatttcttacaaaataggatttcg 11073189  T
Q  515 ttctgtccacatttttaatttggtctatgttgtt 548  Q
    || ||||||  |||| || |||||||||||||||    
T  11073190 ttttgtccatgttttgaacttggtctatgttgtt 11073223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 245 - 350
Target Start/End: Original strand, 39157843 - 39157947
Alignment:
Q  245 atcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacacta 344  Q
    |||||||| ||||||||| | || ||||  |||| |||  ||||||||||||| ||||| ||||||||||||||||||||||||||||| | ||||||||    
T  39157843 atcactttcttactcaactgtatagtttagtttggtttgtggtttttattttatcaaccgaaccaaaccaaatcaaaccgcaacataag-ataaacacta 39157941  T
Q  345 attaaa 350  Q
    ||||||    
T  39157942 attaaa 39157947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 235 - 400
Target Start/End: Original strand, 6693632 - 6693793
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||||||| |||| |||||||||||| ||||||||||| || | |||  |||||| |||||| ||||||||||||||||||     |||||| ||||||    
T  6693632 atgtattcagatcaattttttactcaatcgcatggtttggttaggtttgtggttttaattttatcaaccaaaccaaaccaaa-----ccgcaatataaga 6693726  T
Q  335 aaaaacactaattaaatatgt--catctgcgccaatactcgtaaaaacccaatgaaaactttcataaa 400  Q
    |||| |||||||||||||| |  ||  ||  ||||||||| || |||| ||||||||||||| |||||    
T  6693727 aaaa-cactaattaaatatatatcacttggaccaatactcatagaaactcaatgaaaactttaataaa 6693793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 431 - 535
Target Start/End: Original strand, 9961921 - 9962025
Alignment:
Q  431 tcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacattttt 530  Q
    |||||| ||||||||| ||| | ||||||||||| |||||||| |||||||| | ||||  |||||||||| |||| ||||||||| ||||||| |||||    
T  9961921 tcaaaagtgtatttatgtgctacttgaacttttagagaatgataaaatcttaatattttatatttcttacataataaaattactttgtgtccacgttttt 9962020  T
Q  531 aattt 535  Q
    |||||    
T  9962021 aattt 9962025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 245 - 329
Target Start/End: Original strand, 45949069 - 45949153
Alignment:
Q  245 atcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaaca 329  Q
    |||| ||||| ||||||| ||||||| || |||||||| |||||||||||||||||||| ||||||||||||  |||||||||||    
T  45949069 atcaatttttgactcaactgcatggtatggtttgatttgcggtttttattttaccaaccgaaccaaaccaaacaaaaccgcaaca 45949153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 203 - 353
Target Start/End: Original strand, 25559516 - 25559658
Alignment:
Q  203 cgaaactgcaaaaagctgtatttggtttcgatatgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaac 302  Q
    |||||||||||||| ||| ||||||||  |||||  ||||  |||| ||||||||||||||| |||||||| || | |||  |||||| ||||||||       
T  25559516 cgaaactgcaaaaaactgcatttggttcggatat--attcggatcatttttttactcaaccgtatggtttggttcggtttgtggttttgattttacc--- 25559610  T
Q  303 caaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaatat 353  Q
      ||||||||||||||||||||||| ||||| ||||||| |||||||||||    
T  25559611 --aaccaaaccaaatcaaaccgcaatataag-aaaaacaataattaaatat 25559658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 204 - 313
Target Start/End: Original strand, 9961744 - 9961851
Alignment:
Q  204 gaaactgcaaaaagctgtatttggtttcgatatgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaacc 303  Q
    ||||||||||||| | | ||||||||| |||  ||||||  |||||||||||||||||||||||| |||| |||||||| | ||||| ||||||| ||||    
T  9961744 gaaactgcaaaaaaccgcatttggtttggat--gtattcggatcacttttttactcaaccgcatgatttggtttgatttgctgttttcattttacgaacc 9961841  T
Q  304 aaaccaaacc 313  Q
    || |||||||    
T  9961842 aagccaaacc 9961851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 235 - 313
Target Start/End: Original strand, 23474646 - 23474723
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacc 313  Q
    ||||||||| |||| |||||||| ||||| ||||||||| || ||||| ||||||||||||||||||||||||||||||    
T  23474646 atgtattcagatca-ttttttacccaacctcatggtttggttcgatttgcggtttttattttaccaaccaaaccaaacc 23474723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 152 - 313
Target Start/End: Original strand, 26344501 - 26344660
Alignment:
Q  152 gggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatcgaaactgcaaaaagctgtatttggtttcgatatgtattcaaatcactt 251  Q
    |||||||||||| |||||||||||||||||||||   ||||  ||| ||| | |||| | ||||| | | ||||||||  |||  ||||||  |||| ||    
T  26344501 gggtgtttaaaaccgaaccaatccaatagaaaaatcataaatcgaaccaacccaaaccgtaaaaaaccgcatttggttcggat--gtattcggatcaatt 26344598  T
Q  252 ttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacc 313  Q
    |||||||||||||||||||||| || | ||| | ||||| |||||||||||| |||||||||    
T  26344599 ttttactcaaccgcatggtttggttcggtttgcagttttgattttaccaaccgaaccaaacc 26344660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 560 - 666
Target Start/End: Original strand, 47984361 - 47984466
Alignment:
Q  560 aaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaa 659  Q
    ||||| |||||| | |||||||||||||||||||||||||||||||   ||  ||||||||||||  |||||| |||| ||||||||||| | |||||||    
T  47984361 aaattgtaatgtggaatgaaattaaaaacattgtcggaaatattgcaggaaacatgttgtgttttaccttttt-aactcgattttaatgtcgaaaacaaa 47984459  T
Q  660 aaattgt 666  Q
    |||||||    
T  47984460 aaattgt 47984466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 424 - 540
Target Start/End: Complemental strand, 11537152 - 11537033
Alignment:
Q  424 ttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatg---atgaaatcttagtcttttccatttcttacaaaatagaattactttctgt 520  Q
    |||||||||||||||||||||| |||| | ||||||||||||| ||||   || ||||||||   |||| |||||||||| |||||| ||||| || |||    
T  11537152 ttttatttcaaaaatgtatttacatgctacttgaacttttaaaaaatgataataaaatcttaactttttgcatttcttacgaaataggattacattttgt 11537053  T
Q  521 ccacatttttaatttggtct 540  Q
      ||||||||||||||||||    
T  11537052 taacatttttaatttggtct 11537033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 411 - 544
Target Start/End: Complemental strand, 18310307 - 18310175
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    |||||||||||| |||||||| ||||||||||| || | | | || |||||||   ||||| | |||||||||||||||  |||||||||||||||  ||    
T  18310307 tttcttctttgctttttatttaaaaaatgtattcatgttctacttaaacttttggtgaatgtt-aaatcttagtcttttatatttcttacaaaatatgat 18310209  T
Q  511 tactttctgtccacatttttaatttggtctatgt 544  Q
    |||||| ||| ||| |||| ||||||||||||||    
T  18310208 tactttttgttcacgttttaaatttggtctatgt 18310175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 578 - 666
Target Start/End: Original strand, 15880029 - 15880116
Alignment:
Q  578 aaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgt 666  Q
    ||||| ||||||||||  |||| |||||| ||| ||||||||| |||  |||||||| |||||||||||||||||||||||||||||||    
T  15880029 aaatttaaaacattgttagaaacattgctgaaaatatgttgtgatttacctttttaa-cttgattttaatgttggaaacaaaaaattgt 15880116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 238 - 314
Target Start/End: Complemental strand, 25507421 - 25507346
Alignment:
Q  238 tattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacca 314  Q
    ||||||||||| |||||||||||||||||   |||| |||| ||| |||||||||||||||||||||||||||||||    
T  25507421 tattcaaatca-ttttttactcaaccgcacaatttggtttggtttgcggtttttattttaccaaccaaaccaaacca 25507346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 552 - 668
Target Start/End: Original strand, 39158176 - 39158291
Alignment:
Q  552 tgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttg 651  Q
    ||||||||||||| |||||||| |||| ||| ||||||| || | ||| || ||| ||| ||||||||||| | ||||||| ||||||||||||| || |    
T  39158176 tgaaaatgaaattgtaatgttgaatgacatttaaaacatcgttgaaaacatagctgaaaatatgttgtgttctagcttttt-aacttgattttaacgtcg 39158274  T
Q  652 gaaacaaaaaattgtat 668  Q
     ||||||||||||||||    
T  39158275 aaaacaaaaaattgtat 39158291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 254 - 338
Target Start/End: Complemental strand, 44056273 - 44056189
Alignment:
Q  254 ttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaa 338  Q
    |||||||||||||||||||| ||   ||| ||||||| |||||||||||  |||||||||||| ||||| |||||||||||||||    
T  44056273 ttactcaaccgcatggtttggttatgtttgcggttttcattttaccaactgaaccaaaccaaaccaaactgcaacataagaaaaa 44056189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 250 - 353
Target Start/End: Complemental strand, 6248612 - 6248515
Alignment:
Q  250 ttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaa 349  Q
    |||||||| ||||||||||||||| || | ||| ||||||| |||||||||||| ||||||||     |||||||||| ||||| |||||||||||||||    
T  6248612 ttttttacccaaccgcatggtttggttcggtttgcggttttgattttaccaaccgaaccaaac-----caaaccgcaatataag-aaaaacactaattaa 6248519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 411 - 516
Target Start/End: Complemental strand, 6248440 - 6248334
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgat-gaaatcttagtcttttccatttcttacaaaatagaa 509  Q
    |||||||||||| |||| | |||||||||||||||| ||| | ||||||||||| |||| |||  |||  ||||||||||| |||||||||||||||  |    
T  6248440 tttcttctttgctttttctatcaaaaatgtatttatgtgctaattgaacttttagagaaagataaaaaatttagtcttttctatttcttacaaaatatga 6248341  T
Q  510 ttacttt 516  Q
    |||||||    
T  6248340 ttacttt 6248334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 245 - 400
Target Start/End: Complemental strand, 18310515 - 18310359
Alignment:
Q  245 atcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacacta 344  Q
    |||| ||||| |||||||| ||||||||| |||| ||   ||||||||||||| ||| | |||||||||||| ||||||||||||| || ||| ||||||    
T  18310515 atcattttttgactcaaccacatggtttggtttggttagtggtttttattttatcaaacgaaccaaaccaaaccaaaccgcaacattag-aaatacacta 18310417  T
Q  345 attaa--atatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaa 400  Q
    |||||  ||||||||| |   ||||||||  || |||  ||||||||||||| |||||    
T  18310416 attaaacatatgtcatttaaaccaatacttatagaaattcaatgaaaacttttataaa 18310359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 411 - 524
Target Start/End: Complemental strand, 19051488 - 19051374
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttag-tcttttccatttcttacaaaatagaa 509  Q
    |||||||||| | |||||||| |||||||||||| | ||| | ||||| ||| | |||||||||||||||||| | |||| ||||||||||| ||||  |    
T  19051488 tttcttcttttctttttattttaaaaatgtatttctgtgctacttgaattttcagagaatgatgaaatcttagtttttttgcatttcttacataataaga 19051389  T
Q  510 ttactttctgtccac 524  Q
    ||||||| |||||||    
T  19051388 ttactttttgtccac 19051374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 554 - 666
Target Start/End: Original strand, 15882008 - 15882119
Alignment:
Q  554 aaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttgga 653  Q
    ||||||||||| |||| || ||||||||| |||||||||  ||| | |||| | ||| |||||||||||||  |||||| || ||||||| ||||||| |    
T  15882008 aaaatgaaattgtaatatttgatgaaatttaaaacattgctggagacattgttgaaaatatgttgtgttttatcttttt-aatttgatttaaatgttgaa 15882106  T
Q  654 aacaaaaaattgt 666  Q
    |||||||||||||    
T  15882107 aacaaaaaattgt 15882119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 10847072 - 10847154
Alignment:
Q  251 tttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaa 338  Q
    |||||||||||||||||| |||| ||| ||||  |||||||||||||||| || ||||||||     |||||||||||||||||||||    
T  10847072 tttttactcaaccgcatgatttggtttaatttgtggtttttattttaccagcccaaccaaac-----caaaccgcaacataagaaaaa 10847154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 16063365 - 16063282
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatc 318  Q
    |||||||| ||| | ||||||||||||||||||| |||| ||   ||| ||||||| |||||||||||| ||||||||||||||    
T  16063365 atgtattcgaataatttttttactcaaccgcatgatttggttcagtttgcggttttgattttaccaacccaaccaaaccaaatc 16063282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 687 - 753
Target Start/End: Original strand, 26345037 - 26345107
Alignment:
Q  687 gcaccaaccgatccaatccaaaaccgcattggtttgattt-----ggttcggattttattttaaaagtcaac 753  Q
    |||||||||||||||||||||| ||||||||||||| |||     |||||||||||||||||||||||||||    
T  26345037 gcaccaaccgatccaatccaaa-ccgcattggtttggttttgtttggttcggattttattttaaaagtcaac 26345107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 285 - 351
Target Start/End: Original strand, 27455551 - 27455615
Alignment:
Q  285 ggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaat 351  Q
    |||||| |||||||||||| ||| |||||||||||||| ||||||||||  ||||||||||||||||    
T  27455551 ggttttcattttaccaaccgaactaaaccaaatcaaactgcaacataag--aaaacactaattaaat 27455615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 568 - 663
Target Start/End: Original strand, 36797905 - 36798000
Alignment:
Q  568 atgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaat 663  Q
    ||||||||||||||  || ||||||| ||||| |||||| ||| ||| |||||||||  |||| | |||||||||||||||||  |||||||||||    
T  36797905 atgttggatgaaatataagacattgttggaaacattgctgaaaatatattgtgttttaactttgttaacttgattttaatgttaaaaacaaaaaat 36798000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 338
Target Start/End: Original strand, 11072808 - 11072998
Alignment:
Q  152 gggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatc------gaaactgcaaaaagctgtatttggtttcgatatgtattcaaa 245  Q
    ||||||| |||| | |||||| ||||||||||||| | |||| ||| |||||      ||||||||||||| | | ||||||||  |||  ||| ||  |    
T  11072808 gggtgttcaaaaccaaaccaacccaatagaaaaaccgcaaaccgaaccaatccaaaccgaaactgcaaaaaaccgcatttggttcggat--gtaatcgga 11072905  T
Q  246 tcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaa 338  Q
    ||| ||| || |||||||||||||||||  ||| |||  |||||| ||||||||||||  |||  |||||| |||||||||||||||||||||    
T  11072906 tcattttcttgctcaaccgcatggtttggcttggtttgaggttttcattttaccaaccgcaccgcaccaaaccaaaccgcaacataagaaaaa 11072998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 409 - 542
Target Start/End: Original strand, 23474817 - 23474951
Alignment:
Q  409 attttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttc---catttcttacaaaat 505  Q
    |||||||||||||  |||||||| |||| ||||||||| ||  | ||||  ||||| | |||||| |||||||||| ||||    |||||||||||||||    
T  23474817 attttcttctttgatttttattttaaaa-tgtatttatgtgttacttgagattttaga-aatgataaaatcttagttttttttttcatttcttacaaaat 23474914  T
Q  506 agaattactttctgtccacatttttaatttggtctat 542  Q
    || |||| ||| ||||||| |||||||||||||||||    
T  23474915 aggattagtttttgtccacgtttttaatttggtctat 23474951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 552 - 602
Target Start/End: Complemental strand, 25532931 - 25532881
Alignment:
Q  552 tgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatat 602  Q
    ||||||||||||||||||||| ||||||||| |||||||||| ||||||||    
T  25532931 tgaaaatgaaattttaatgtttgatgaaatttaaaacattgttggaaatat 25532881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 237 - 353
Target Start/End: Complemental strand, 25533368 - 25533256
Alignment:
Q  237 gtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaa 336  Q
    ||||||||||   ||| ||||||||| ||||| ||||||| | ||| ||||||| ||||||| ||||||   ||||||||| ||||||||||||||   |    
T  25533368 gtattcaaatttttttcttactcaacagcatgatttgattcggtttgcggttttcattttac-aaccaatttaaaccaaattaaaccgcaacataa---a 25533273  T
Q  337 aaacactaattaaatat 353  Q
    |||||||||||||||||    
T  25533272 aaacactaattaaatat 25533256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 411 - 524
Target Start/End: Original strand, 26344764 - 26344878
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatc-ttagtcttttccatttcttacaaaatagaa 509  Q
    |||||||||||| |||| ||||||||||||||| || | | |  |||||| ||| |||||||| |||   ||||||||||  |||||||||||||||| |    
T  26344764 tttcttctttgctttttctttcaaaaatgtattcatgtactacctgaactcttagagaatgataaaaaaattagtcttttgtatttcttacaaaatagga 26344863  T
Q  510 ttactttctgtccac 524  Q
    ||||||| |||||||    
T  26344864 ttactttttgtccac 26344878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 411 - 548
Target Start/End: Original strand, 52380450 - 52380587
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaa-tcttagtcttttccatttcttacaaaatagaa 509  Q
    |||||||||||  |||| | |||||||||||||||| ||| ||||||||| ||| ||||| || ||| | ||||||||||  |||||||||||| ||  |    
T  52380450 tttcttctttgttttttctatcaaaaatgtatttatgtgctatttgaactcttagagaatcataaaacttttagtcttttgtatttcttacaaactatga 52380549  T
Q  510 ttactttctgtccacatttttaatttggtctatgttgtt 548  Q
    ||||||| ||| | |  ||||||||||||||| ||||||    
T  52380550 ttactttttgtgcgc-gttttaatttggtctacgttgtt 52380587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 235 - 308
Target Start/End: Original strand, 16537362 - 16537435
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaacc 308  Q
    ||||||||  |||| | |||| |||||||||||| |||| |||| ||| |||||||||||||||||||||||||    
T  16537362 atgtattcggatcattattttcctcaaccgcatgatttggtttggtttgcggtttttattttaccaaccaaacc 16537435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 245 - 338
Target Start/End: Original strand, 32909904 - 32909997
Alignment:
Q  245 atcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaa 338  Q
    |||| ||||||  |||||||||||||||| |||| |||  |||||| |||||||||| | |||  || |||| |||||||||||||||||||||    
T  32909904 atcatttttttgttcaaccgcatggtttggtttggtttgtggttttcattttaccaatcgaacagaatcaaaccaaaccgcaacataagaaaaa 32909997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 687 - 747
Target Start/End: Complemental strand, 50471325 - 50471266
Alignment:
Q  687 gcaccaaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaa 747  Q
    ||||||||||||| |||| ||| ||||||||||||| ||||||| ||||||||||||||||    
T  50471325 gcaccaaccgatctaatctaaa-ccgcattggtttggtttggtttggattttattttaaaa 50471266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 264 - 351
Target Start/End: Complemental strand, 382585 - 382499
Alignment:
Q  264 gcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaat 351  Q
    |||||||||| || | ||| ||||||||||||||||| |||||||||| |||  |||   |||||||||| |||||||||||||||||    
T  382585 gcatggtttggttcggtttgcggtttttattttaccagccaaaccaaatcaatccaacttgcaacataag-aaaaacactaattaaat 382499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 411 - 541
Target Start/End: Original strand, 25559735 - 25559865
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgat-gaaatcttagtcttttccatttcttacaaaatagaa 509  Q
    |||||||||||| ||||||||||||||||||||||| | | | ||||||| |||  |||||||  |||   | |||||||  |||||||||||| | | |    
T  25559735 tttcttctttgctttttatttcaaaaatgtatttatctactacttgaactcttagcgaatgataaaaaaaattgtcttttgtatttcttacaaagttgga 25559834  T
Q  510 ttactttctgtccacatttttaatttggtcta 541  Q
    ||||||| |||||||  |||||||||||||||    
T  25559835 ttactttttgtccac-gttttaatttggtcta 25559865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 250 - 353
Target Start/End: Original strand, 26063752 - 26063853
Alignment:
Q  250 ttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaa 349  Q
    ||||||||| |||| ||||||||| || | |||   ||||| |||||||||||| ||||||| |||| |||||||||| ||||| ||||||| |||||||    
T  26063752 ttttttactaaaccacatggtttggttcggtttggagttttgattttaccaaccgaaccaaa-caaaccaaaccgcaatataag-aaaaacattaattaa 26063849  T
Q  350 atat 353  Q
    ||||    
T  26063850 atat 26063853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 301
Target Start/End: Original strand, 36781648 - 36781802
Alignment:
Q  150 tagggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaa------tcaatcgaaactgcaaaaagctgtatttggtttcgatatgtattca 243  Q
    |||||||| |||||||||||||||| |||||||||| ||||||| |||        ||||||||| | ||||  | ||||||||||| |  |||||||||    
T  36781648 tagggtgtataaaatcgaaccaatcaaatagaaaaattgtaaaccgaactaaaccaaatcgaaaccgtaaaatacggtatttggtttgg--atgtattca 36781745  T
Q  244 aatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaa 301  Q
     ||||  ||||||||||||||||||||||| || | ||| ||||||| |||| |||||    
T  36781746 gatca-atttttactcaaccgcatggtttggttcggtttgcggttttgatttaaccaa 36781802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 235 - 313
Target Start/End: Original strand, 3532542 - 3532620
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacc 313  Q
    ||||||||||||   ||||||| |||||||||| ||| |||||| ||| |  ||||||||||| |||||||||||||||    
T  3532542 atgtattcaaatattttttttattcaaccgcattgttcgatttggtttgcaatttttattttatcaaccaaaccaaacc 3532620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 310 - 416
Target Start/End: Complemental strand, 9330882 - 9330774
Alignment:
Q  310 aaccaaatcaaaccgcaacataagaaaaaacactaattaa--atatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcat-aaatgacat 406  Q
    |||||||||||| |||||||||||| |||||| |||||||  |||||||| ||   ||||||||| || |||| ||||||||||||| || |||||| ||    
T  9330882 aaccaaatcaaatcgcaacataaga-aaaacattaattaaacatatgtcacctagaccaatactcatagaaactcaatgaaaacttttataaaatgatat 9330784  T
Q  407 atattttctt 416  Q
    || |||||||    
T  9330783 attttttctt 9330774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 411 - 544
Target Start/End: Complemental strand, 34914498 - 34914365
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgat-gaaatcttagtcttttccatttcttacaaaatagaa 509  Q
    |||||||||||| |||| ||| |||||||||||||| ||| | ||||||| ||| ||||| ||  |||  ||||||||||  |||||||||||| | | |    
T  34914498 tttcttctttgctttttctttaaaaaatgtatttatgtgctacttgaactcttagagaataataaaaaatttagtcttttatatttcttacaaagttgga 34914399  T
Q  510 ttactttctgtccacatttttaatttggtctatgt 544  Q
    ||||||| | |||||   |||||||||||||||||    
T  34914398 ttactttttatccac-ggtttaatttggtctatgt 34914365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 287 - 353
Target Start/End: Original strand, 52380308 - 52380373
Alignment:
Q  287 tttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaatat 353  Q
    |||| |||||||||||| ||||||||||||  ||||| ||| ||||| |||||||||||||||||||    
T  52380308 ttttgattttaccaaccgaaccaaaccaaactaaaccccaatataag-aaaaacactaattaaatat 52380373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 235 - 313
Target Start/End: Complemental strand, 52829346 - 52829269
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacc 313  Q
    ||||||||| |||| |||||||||||||||| | ||||| || ||||| | ||||||||||||| |||| |||||||||    
T  52829346 atgtattcagatca-ttttttactcaaccgcgtagtttggttcgatttgcagtttttattttactaaccgaaccaaacc 52829269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 688 - 753
Target Start/End: Complemental strand, 3935554 - 3935490
Alignment:
Q  688 caccaaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    ||||||| |||||||| |||| ||| |||  ||| |||||||||||||||||||||||||||||||    
T  3935554 caccaactgatccaattcaaa-ccgtattaatttaatttggttcggattttattttaaaagtcaac 3935490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 3937341 - 3937231
Alignment:
Q  200 aatcgaaactgcaaaaagctgtatttggtttcgatatgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttacc 299  Q
    ||||||||||||||||| ||| || |||||| |||  |||||   || | |||||||| ||||| ||||||||| || | ||| ||||||| |||||| |    
T  3937341 aatcgaaactgcaaaaaactgcatctggtttggat--gtatttggataatttttttacccaaccacatggtttggttcggtttgcggttttgattttagc 3937244  T
Q  300 aaccaaaccaaac 312  Q
    |||||||||||||    
T  3937243 aaccaaaccaaac 3937231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 15881642 - 15881683
Alignment:
Q  152 gggtgtttaaaatcgaaccaatccaatagaaaaactgtaaac 193  Q
    ||||||| ||||||||||||||||||||||||||||| ||||    
T  15881642 gggtgttcaaaatcgaaccaatccaatagaaaaactgcaaac 15881683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 411 - 544
Target Start/End: Original strand, 21685269 - 21685401
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    ||||||| |||| ||||||||||||| |||||| |||||| | |||||||||||  ||||| | |||| || ||  |||  |||||||||||||||  ||    
T  21685269 tttcttccttgctttttatttcaaaagtgtattcatatgctacttgaacttttagtgaatgttaaaat-tttgtgatttatatttcttacaaaatatgat 21685367  T
Q  511 tactttctgtccacatttttaatttggtctatgt 544  Q
    |||||| ||| ||| |||  |||||||| |||||    
T  21685368 tactttatgttcacgtttaaaatttggtttatgt 21685401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 629 - 673
Target Start/End: Original strand, 11074324 - 11074368
Alignment:
Q  629 ttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    |||| ||||| |||||||||||||||||||||||| |||||||||    
T  11074324 tttttaactttattttaatgttggaaacaaaaaatggtatcgtct 11074368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 612 - 668
Target Start/End: Original strand, 23475021 - 23475075
Alignment:
Q  612 tatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtat 668  Q
    |||||||| |||| ||||||||| ||| |||||||||||||||||||||||||||||    
T  23475021 tatgttgt-ttttagctttttaa-cttaattttaatgttggaaacaaaaaattgtat 23475075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 409 - 473
Target Start/End: Complemental strand, 41751588 - 41751524
Alignment:
Q  409 attttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgat 473  Q
    |||||||||||||  ||| |||||||||||||||||| |||| | ||||| ||||| ||||||||    
T  41751588 attttcttctttgtttttaatttcaaaaatgtatttacatgctacttgaatttttagagaatgat 41751524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 601 - 660
Target Start/End: Original strand, 6694274 - 6694332
Alignment:
Q  601 attgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaa 660  Q
    |||||| ||| |||||||||||||  ||||||||  ||||||||||||||||||||||||    
T  6694274 attgctgaaaatatgttgtgttttaactttttaat-ttgattttaatgttggaaacaaaa 6694332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 668
Target Start/End: Complemental strand, 17651910 - 17651871
Alignment:
Q  629 ttttaaacttgattttaatgttggaaacaaaaaattgtat 668  Q
    |||| |||| ||||||||||||||||||||||||||||||    
T  17651910 tttttaactcgattttaatgttggaaacaaaaaattgtat 17651871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 715 - 754
Target Start/End: Original strand, 21685553 - 21685592
Alignment:
Q  715 ttggtttgatttggttcggattttattttaaaagtcaact 754  Q
    |||||||| |||||||| ||||||||||||||||||||||    
T  21685553 ttggtttggtttggttctgattttattttaaaagtcaact 21685592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 540
Target Start/End: Complemental strand, 35375519 - 35375404
Alignment:
Q  425 tttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccac 524  Q
    |||| ||||||| |||||| |||||| | |||||||||||  ||||| | |||| |||| |||||  |||||||| ||||||  |||||||| ||| |||    
T  35375519 tttaattcaaaagtgtattcatatgctacttgaacttttagtgaatgttaaaatattagacttttgtatttcttataaaatatgattactttttgttcac 35375420  T
Q  525 atttttaatttggtct 540  Q
     |||| ||||| ||||    
T  35375419 gttttaaattttgtct 35375404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 50951556 - 50951619
Alignment:
Q  251 tttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacca 314  Q
    |||||| |||||||||||||||| || | ||  ||||||||||||||| ||||||| |||||||    
T  50951556 tttttattcaaccgcatggtttggttcggttggcggtttttattttactaaccaaatcaaacca 50951619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 235 - 293
Target Start/End: Complemental strand, 8269225 - 8269167
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttat 293  Q
    ||||||| | ||||||||||||||||||| |||| |||| ||  |||||||||||||||    
T  8269225 atgtatttagatcacttttttactcaaccacatgatttggttcaatttacggtttttat 8269167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 8269295 - 8269257
Alignment:
Q  155 tgtttaaaatcgaaccaatccaatagaaaaactgtaaac 193  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  8269295 tgttcaaaatcgaaccaatccaatagaaaaaccgtaaac 8269257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 315 - 353
Target Start/End: Original strand, 15881799 - 15881836
Alignment:
Q  315 aatcaaaccgcaacataagaaaaaacactaattaaatat 353  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  15881799 aatcaaaccgcaacataag-aaaaacactaattaaatat 15881836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 245 - 295
Target Start/End: Complemental strand, 24630490 - 24630440
Alignment:
Q  245 atcacttttttactcaaccgcatggtttgatttgatttacggtttttattt 295  Q
    ||||||||||||||||||||||||||||| ||   ||| ||||||||||||    
T  24630490 atcacttttttactcaaccgcatggtttggttcagtttgcggtttttattt 24630440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 33770238 - 33770188
Alignment:
Q  287 tttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaa 337  Q
    ||||||||||| ||||| ||||||| | ||||||||||||| |||||||||    
T  33770238 tttttattttagcaaccgaaccaaatcgaatcaaaccgcaatataagaaaa 33770188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 719 - 753
Target Start/End: Complemental strand, 50153476 - 50153442
Alignment:
Q  719 tttgatttggttcggattttattttaaaagtcaac 753  Q
    |||| ||||||||||||||||||||||||||||||    
T  50153476 tttggtttggttcggattttattttaaaagtcaac 50153442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 634 - 668
Target Start/End: Original strand, 50951968 - 50952002
Alignment:
Q  634 aacttgattttaatgttggaaacaaaaaattgtat 668  Q
    |||||||||||||||||| ||||||||||||||||    
T  50951968 aacttgattttaatgttgaaaacaaaaaattgtat 50952002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 186
Target Start/End: Original strand, 51251906 - 51251940
Alignment:
Q  152 gggtgtttaaaatcgaaccaatccaatagaaaaac 186  Q
    |||||||||||| ||||||||||||||||||||||    
T  51251906 gggtgtttaaaaccgaaccaatccaatagaaaaac 51251940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 601 - 662
Target Start/End: Original strand, 26344954 - 26345014
Alignment:
Q  601 attgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaa 662  Q
    |||||| ||| |||||||||||||  ||||||||  |||||||||||||||||||| |||||    
T  26344954 attgctgaaaatatgttgtgttttaactttttaat-ttgattttaatgttggaaaccaaaaa 26345014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 715 - 752
Target Start/End: Complemental strand, 27350730 - 27350693
Alignment:
Q  715 ttggtttgatttggttcggattttattttaaaagtcaa 752  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  27350730 ttggtttgattttgttcgaattttattttaaaagtcaa 27350693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 601 - 662
Target Start/End: Complemental strand, 34914308 - 34914248
Alignment:
Q  601 attgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaa 662  Q
    |||||| ||| ||||||||||||| | |||||||  ||||||||||| ||||||||||||||    
T  34914308 attgctgaaaatatgttgtgttttaggtttttaat-ttgattttaatattggaaacaaaaaa 34914248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 715 - 752
Target Start/End: Complemental strand, 35375247 - 35375210
Alignment:
Q  715 ttggtttgatttggttcggattttattttaaaagtcaa 752  Q
    |||||||  |||||||||||||||||||||||||||||    
T  35375247 ttggttttgtttggttcggattttattttaaaagtcaa 35375210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 593
Target Start/End: Original strand, 39167136 - 39167177
Alignment:
Q  552 tgaaaatgaaattttaatgttggatgaaattaaaaacattgt 593  Q
    ||||||| ||||| ||||||||||||||||| ||||||||||    
T  39167136 tgaaaataaaattgtaatgttggatgaaatttaaaacattgt 39167177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 148; Significance: 1e-77; HSPs: 3)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 235 - 753
Target Start/End: Complemental strand, 26419 - 25896
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||||||  ||||||||||| ||||||||||||||||| |||| ||| ||||||| |||||||||||| ||||||||||||  ||||||||||||||||    
T  26419 atgtattcggatcacttttttgctcaaccgcatggtttggtttggtttgcggttttcattttaccaaccgaaccaaaccaaacaaaaccgcaacataaga 26320  T
Q  335 aaaaacactaattaaatatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaa-tgacatatattttct--------------tctt 419  Q
    ||||   |||||    ||||||| ||   ||||||||| || |||| ||||| ||||||| ||||| |||||||| ||||||              ||||    
T  26319 aaaatt-ctaatc---tatgtcacctagaccaatactcatagaaactcaatggaaacttttataaaatgacatattttttctattgttaagtttcttctt 26224  T
Q  420 tgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctg 519  Q
    ||| ||||||||||||||||||||||| ||  | |||||||||||||||||||| |||| ||||| |||| |||||||| || |||||||||||||| ||    
T  26223 tgctttttatttcaaaaatgtatttatgtgttacttgaacttttaaagaatgataaaatattagtattttacatttctttcataatagaattactttatg 26124  T
Q  520 tccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgt 619  Q
    ||||||||||||||||||| || ||||||| | || ||| ||| | |||||| | |||||||||||||||||||||| || |||||| ||| ||||||||    
T  26123 tccacatttttaatttggtttacgttgtttggagataatcaaagtgtaatgtggaatgaaattaaaaacattgtcgg-aacattgctgaaa-tatgttgt 26026  T
Q  620 gttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtctggtnnnnnnnnntgcaccaa-ccgatccaatccaaaaccgcattgg 718  Q
    |||||  |||||| |||| ||||||||||||| |||||||||||||||| |||| |            |||||| |||||||||| | |||||||||||     
T  26025 gttttaccttttt-aactcgattttaatgttgaaaacaaaaaattgtattgtctcgaaaaaacca---caccaacccgatccaattc-aaaccgcattga 25931  T
Q  719 tttgatttggttcggattttattttaaaagtcaac 753  Q
    |||| ||||||| ||||||||||||||||||||||    
T  25930 tttggtttggtttggattttattttaaaagtcaac 25896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 410 - 673
Target Start/End: Complemental strand, 14891 - 14631
Alignment:
Q  410 ttttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaa 509  Q
    ||||||||||| | || ||||| |||||||||||||| |||   |||||||||||| ||||||| |||||| ||| ||| | |||||||||| |||| ||    
T  14891 ttttcttcttttctttctatttaaaaaatgtatttatgtgctccttgaacttttaa-gaatgataaaatctaagtatttac-atttcttacataatataa 14794  T
Q  510 ttactttctgt-ccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaa 608  Q
    ||| ||| | | ||| |||||||||||||| |||||||||  |||||||||||| | ||| || | || ||||||||||||||||||| ||  ||||| |    
T  14793 ttaattttttttccaaatttttaatttggtttatgttgttcggtgaaaatgaaaatgtaaagtggaataaaattaaaaacattgtcgg-aaccttgctga 14695  T
Q  609 aattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    || |||||||| ||||  |||||| |||| ||||||||||||| |||||||||||||||| ||||    
T  14694 aaatatgttgtattttaccttttt-aactcgattttaatgttgcaaacaaaaaattgtattgtct 14631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 235 - 316
Target Start/End: Complemental strand, 15077 - 14997
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaa 316  Q
    ||||||||| |||||||||| |||||||||||| ||||| |||| | | ||||||| |||||||||||| ||||||||||||    
T  15077 atgtattcagatcacttttt-actcaaccgcatagtttggtttggtctgcggttttcattttaccaaccgaaccaaaccaaa 14997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 148; Significance: 1e-77; HSPs: 103)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 235 - 753
Target Start/End: Complemental strand, 48338897 - 48338374
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||||||  ||||||||||| ||||||||||||||||| |||| ||| ||||||| |||||||||||| ||||||||||||  ||||||||||||||||    
T  48338897 atgtattcggatcacttttttgctcaaccgcatggtttggtttggtttgcggttttcattttaccaaccgaaccaaaccaaacaaaaccgcaacataaga 48338798  T
Q  335 aaaaacactaattaaatatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaa-tgacatatattttct--------------tctt 419  Q
    ||||   |||||    ||||||| ||   ||||||||| || |||| ||||| ||||||| ||||| |||||||| ||||||              ||||    
T  48338797 aaaatt-ctaatc---tatgtcacctagaccaatactcatagaaactcaatggaaacttttataaaatgacatattttttctattgttaagtttcttctt 48338702  T
Q  420 tgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctg 519  Q
    ||| ||||||||||||||||||||||| ||  | |||||||||||||||||||| |||| ||||| |||| |||||||| || |||||||||||||| ||    
T  48338701 tgctttttatttcaaaaatgtatttatgtgttacttgaacttttaaagaatgataaaatattagtattttacatttctttcataatagaattactttatg 48338602  T
Q  520 tccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgt 619  Q
    ||||||||||||||||||| || ||||||| | || ||| ||| | |||||| | |||||||||||||||||||||| || |||||| ||| ||||||||    
T  48338601 tccacatttttaatttggtttacgttgtttggagataatcaaagtgtaatgtggaatgaaattaaaaacattgtcgg-aacattgctgaaa-tatgttgt 48338504  T
Q  620 gttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtctggtnnnnnnnnntgcaccaa-ccgatccaatccaaaaccgcattgg 718  Q
    |||||  |||||| |||| ||||||||||||| |||||||||||||||| |||| |            |||||| |||||||||| | |||||||||||     
T  48338503 gttttaccttttt-aactcgattttaatgttgaaaacaaaaaattgtattgtctcgaaaaaacca---caccaacccgatccaattc-aaaccgcattga 48338409  T
Q  719 tttgatttggttcggattttattttaaaagtcaac 753  Q
    |||| ||||||| ||||||||||||||||||||||    
T  48338408 tttggtttggtttggattttattttaaaagtcaac 48338374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 235 - 595
Target Start/End: Original strand, 36105994 - 36106370
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||  |||||||||||| ||||| |||||| |||||||||||||| ||    
T  36105994 atgtattcagatcacttttttactcaaccgcatggtttgctttgctttgcggtttccattttaccaaccgaaccagaccaaaccaaaccgcaacatagga 36106093  T
Q  335 aaaaacactaattaaat--atgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaat-gacatatatttt---------------ctt 416  Q
    |||| | ||||||||||  |||||| ||   ||||||||| || || | ||||  ||||||| |||||  | ||||| ||||               |||    
T  36106094 aaaa-ctctaattaaatctatgtcacctagaccaatactcatagaatctcaattgaaacttttataaaacggcatatttttttcttttgttaagtttctt 36106192  T
Q  417 ctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattacttt 516  Q
    |||| | ||||||||||||||||||||||| |||   ||||||||| | |||||||| |||| ||||| ||| | ||||||| || ||||||||||||||    
T  36106193 ctttactttttatttcaaaaatgtatttatgtgctccttgaactttaagagaatgataaaatattagtatttac-atttctttcataatagaattacttt 36106291  T
Q  517 ctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcg 595  Q
     |||||||||||||||||| || ||||||||| || |||||||||| | |||||| | |||||||||||||||||||||    
T  36106292 atgtccacatttttaatttagtttatgttgttcagagaaaatgaaagtgtaatgtggaatgaaattaaaaacattgtcg 36106370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 235 - 673
Target Start/End: Original strand, 32222836 - 32223288
Alignment:
Q  235 atgtattcaaatcactttttta---ctcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacata 331  Q
    |||||||||||| |||||||||   |||||||| |||||||| |||| ||| ||||||| ||||||| ||  |  || ||||||| ||||||||||||||    
T  32222836 atgtattcaaattacttttttattactcaaccgtatggtttggtttggtttgcggttttcattttacaaatta--ccgaaccaaaccaaaccgcaacata 32222933  T
Q  332 agaaaaaacactaattaaa---tatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaa-tgacatatattttctt----------- 416  Q
    | ||||| |||||||||||   ||||||| ||   |||||| || || |||| ||||| ||||||| ||||| |||||||| |||||||               
T  32222934 ataaaaa-cactaattaaaatatatgtcacctataccaatattcatataaactcaatgtaaacttttataaaatgacatattttttcttgttaagtttct 32223032  T
Q  417 -ctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactt 515  Q
     |||| | ||||||||||||| ||||||| | ||| | ||||||||||| |||||||| |||| | ||| |||| ||| |||| || |||||||||| ||    
T  32223033 tctttactttttatttcaaaagtgtatttgtgtgctacttgaacttttagagaatgataaaatataagtattttacatgtctttcacaatagaattaatt 32223132  T
Q  516 tctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatg 615  Q
    | ||||||  |||||||||| || |||||||||| |||||||||||| | ||| || | ||||| ||||||| |||||||| ||  ||| | |||||| |    
T  32223133 tttgtccatgtttttaatttagtttatgttgtttggtgaaaatgaaaatgtaacgtggaatgaagttaaaaatattgtcgg-aaccttgttgaaattaag 32223231  T
Q  616 ttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    |||||||||  |||||| |||| |||||||||||||||||||||||||||||| ||||    
T  32223232 ttgtgttttaccttttt-aactagattttaatgttggaaacaaaaaattgtattgtct 32223288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 235 - 592
Target Start/End: Complemental strand, 46471974 - 46471612
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||||||  |||||||||||||||||||||||| |||| |||| ||| ||||||| ||||||  |||||||||||||||          ||||||||||    
T  46471974 atgtattcggatcacttttttactcaaccgcatgatttggtttggtttgcggttttcattttatgaaccaaaccaaacca----------caacataaga 46471885  T
Q  335 aaaaacactaattaaat-atgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaa-tgacatatattttct--------------tct 418  Q
    |||| |  ||||||||| |||||| ||   ||||||||  ||||||| ||||| ||| ||| ||||| |||||||| ||||||              |||    
T  46471884 aaaa-ctttaattaaattatgtcacctagaccaatacttataaaaactcaatggaaatttttataaaatgacatattttttctcttgttaagttttttct 46471786  T
Q  419 ttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttct 518  Q
    || | ||||||||||||||||||||||| ||  | || |||||||| |||||||| |||||||| ||||||   ||||||||| |||||||||||||| |    
T  46471785 ttactttttatttcaaaaatgtatttatgtgatacttcaacttttagagaatgataaaatcttaatcttttatgtttcttacataatagaattactttgt 46471686  T
Q  519 gtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattg 592  Q
    |||||| ||||||||||||| |||||||||| |||||||||||||| ||||||   ||||||||||||||||||    
T  46471685 gtccacgtttttaatttggtttatgttgtttggtgaaaatgaaattgtaatgtgaaatgaaattaaaaacattg 46471612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 409 - 662
Target Start/End: Complemental strand, 4689049 - 4688797
Alignment:
Q  409 attttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaataga 508  Q
    |||||||||||||  ||| || |||||||||||||||  ||| | |||||||||| || |||||| |||| ||| |||||| ||||||||| | ||||      
T  4689049 attttcttctttgtttttcatctcaaaaatgtatttaggtgctacttgaactttttaataatgataaaattttaatcttttgcatttcttatagaatatg 4688950  T
Q  509 attactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaa 608  Q
    |||||||| |||| |||||||||||||||| |||||||||  |||||||||||||  |||||||||| |||||  |||||||||| || || |||| |      
T  4688949 attactttttgtctacatttttaatttggtatatgttgttgggtgaaaatgaaataataatgttggaggaaatataaaacattgttgggaacattgttgc 4688850  T
Q  609 aattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaa 662  Q
    || |||||||||||||  |||||| ||||||| |||||||||| ||||||||||    
T  4688849 aaatatgttgtgttttaccttttt-aacttgagtttaatgttgaaaacaaaaaa 4688797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 250 - 579
Target Start/End: Original strand, 25686025 - 25686344
Alignment:
Q  250 ttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaa 349  Q
    |||||||||||||| ||||||||| |||| ||| ||||||||||||||| |||||||||||||||| |      ||||||||||||||| ||||||||||    
T  25686025 ttttttactcaaccacatggtttggtttggtttgcggtttttattttac-aaccaaaccaaaccaagtt-----gcaacataagaaaaa-cactaattaa 25686117  T
Q  350 atatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaatgacatatatt----ttcttctttgccttttatttcaaaaatgtattta 445  Q
    |     ||| |||  || ||||| ||||||  ||||| ||||||| ||||||  |  |  ||    ||||| || || |||||||| |||||||||||||    
T  25686118 a-----catatgccaca-tactcataaaaattcaatggaaacttttataaatttctcaggttaagtttctttttcgctttttattttaaaaatgtattta 25686211  T
Q  446 tatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgtt 545  Q
      ||| | |||||||||||||||||||| |||| |||||||||| ||||| ||| |||||||||||| ||| |  |||| ||||| ||||||||||||||    
T  25686212 g-tgctacttgaacttttaaagaatgataaaattttagtcttttacatttgttataaaatagaattaattttttgccacgttttttatttggtctatgtt 25686310  T
Q  546 gtttagtgaaaatgaaattttaatgttggatgaa 579  Q
    |||  |||||||||||| | ||||||| ||||||    
T  25686311 gttgtgtgaaaatgaaactgtaatgttcgatgaa 25686344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 475 - 633
Target Start/End: Original strand, 7764210 - 7764368
Alignment:
Q  475 aaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttgg 574  Q
    ||||||||||||||| ||||||||| ||||||  |||||||| || |||| |||||||||||||||| |||||| | ||||||||||||| |||||||||    
T  7764210 aaatcttagtcttttacatttcttataaaatatgattactttttgaccacgtttttaatttggtctaagttgttgaatgaaaatgaaattgtaatgttgg 7764309  T
Q  575 atgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggcttttta 633  Q
    | ||||||  ||||||| | ||||| |||| |  ||||||||||||||||  |||||||    
T  7764310 aagaaatttgaaacattcttggaaacattgatgcaattatgttgtgttttaacttttta 7764368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 460 - 634
Target Start/End: Original strand, 18881805 - 18881979
Alignment:
Q  460 ttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtttagtgaaaatg 559  Q
    ||||| |||||||| |||||||||  |||  ||||||||||| ||||||||||||||||||  || |||||||| | || ||| || ||| ||||||||     
T  18881805 ttttatagaatgataaaatcttagggtttgacatttcttacataatagaattactttctgtttacctttttaatattgtttatattatttggtgaaaata 18881904  T
Q  560 aaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaa 634  Q
    ||||| ||||||||||||||||| |||| ||||| ||||| ||||||| || ||||||||||| | |||||||||    
T  18881905 aaattataatgttggatgaaatttaaaatattgttggaaacattgctagaaatatgttgtgttatagctttttaa 18881979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 235 - 541
Target Start/End: Complemental strand, 21069616 - 21069293
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||||||  |||| |||||||||||||||||||||||  || | ||| || |||| |||||||||||| |||||||||||| |||||||| | |||||     
T  21069616 atgtattcggatcaattttttactcaaccgcatggttttgttcggtttgcg-ttttgattttaccaaccgaaccaaaccaaaccaaaccgcgatataag- 21069519  T
Q  335 aaaaacactaattaa--atatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcat-aaatgacatat----------------attttct 415  Q
    |||||||||||||||  ||||||||  | | |||||||||||| ||||  |||||||||||| || |||||||||||                | |||||    
T  21069518 aaaaacactaattaaatatatgtcacttacaccaatactcgtataaacttaatgaaaactttaataaaatgacatatgttttttctcttgttaagtttct 21069419  T
Q  416 tctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgat-gaaatcttagtcttttccatttcttacaaaatagaattact 514  Q
    ||||||| |||| |||||||||||||||||| | | | ||||||| ||| ||||||||  |||  |||||||||| ||||||||||| ||||  ||||||    
T  21069418 tctttgctttttgtttcaaaaatgtatttatgtactacttgaactcttagagaatgataaaaaatttagtcttttgcatttcttacataatatgattact 21069319  T
Q  515 ttctgtccacatttttaatttggtcta 541  Q
    || |||||||| |||||||||||||||    
T  21069318 ttttgtccaca-ttttaatttggtcta 21069293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 411 - 536
Target Start/End: Complemental strand, 45226739 - 45226614
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    |||||||||||| ||||||||||||||||||||||  ||| |||||||| |||| |||||||| ||||||||  ||||| |||||||||||||||| |||    
T  45226739 tttcttctttgctttttatttcaaaaatgtatttacgtgctatttgaacctttagagaatgataaaatcttatccttttgcatttcttacaaaataaaat 45226640  T
Q  511 tactttctgtccacatttttaatttg 536  Q
    |||||| ||| ||| |||||||||||    
T  45226639 tactttttgttcacgtttttaatttg 45226614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 415 - 548
Target Start/End: Original strand, 5122101 - 5122234
Alignment:
Q  415 ttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattact 514  Q
    |||||||| |||||||| ||||| |||||||| ||| | ||||||||||| | |||||| ||| ||||||||||| ||| | ||||||||||||||||||    
T  5122101 ttctttgctttttatttaaaaaacgtatttatgtgctacttgaacttttatataatgataaaaccttagtcttttgcatcttttacaaaatagaattact 5122200  T
Q  515 ttctgtccacatttttaatttggtctatgttgtt 548  Q
    || ||||||| ||||||||||||| ||| |||||    
T  5122201 ttttgtccacgtttttaatttggtttatattgtt 5122234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 152 - 510
Target Start/End: Original strand, 18536096 - 18536475
Alignment:
Q  152 gggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatc------gaaactgcaaaaagctgtatttggtttcgatatgtattcaaa 245  Q
    ||||||| |||| | |||||||||||||||||||||| |||||||| ||| |      ||||| ||||||| | | |||| | || |||  ||||||  |    
T  18536096 gggtgttcaaaaccaaaccaatccaatagaaaaactgcaaactgaaccaacctaaaccgaaaccgcaaaaaaccgcatttagcttggat--gtattcgga 18536193  T
Q  246 tcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaa 345  Q
    | |||||||||||||||| ||||||||| |||| |||   ||||| ||||||| |||| ||||||| |||| ||||||||||||||| ||||| ||||||    
T  18536194 taacttttttactcaacctcatggtttgctttggtttgtagttttcattttacaaaccgaaccaaatcaaaccaaaccgcaacataataaaaa-cactaa 18536292  T
Q  346 ttaaa---tatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaa-tgacatatattttct--------------tctttgcctttt 427  Q
    |||||   |||| || ||   ||||||||| || ||||  |||| ||||||| ||||| |||||||| ||||||              |||| || ||||    
T  18536293 ttaaaatttatgccaactagaccaatactcatataaactaaatggaaacttttataaaatgacatattttttctcttgttaagtttcttcttcgcttttt 18536392  T
Q  428 atttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    ||||||||||||||||||| ||| | ||||||||||| |||||||| | |||| ||| |||| ||||||||||| ||||||||    
T  18536393 atttcaaaaatgtatttatgtgctacttgaacttttagagaatgataacatctaagtattttacatttcttacacaatagaat 18536475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 468 - 673
Target Start/End: Complemental strand, 51907377 - 51907177
Alignment:
Q  468 aatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaatttta 567  Q
    |||||| |||||||||| || | ||||| ||||||||    |||||| | ||||||  ||||||||||||||||| |||||  |||||||| ||||| ||    
T  51907377 aatgataaaatcttagttttatacatttattacaaaa----attactctttgtccatgtttttaatttggtctatattgttgggtgaaaataaaattgta 51907282  T
Q  568 atgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgta 667  Q
    | ||||||||||||  ||||||||||   ||| |||| |  || |||||||||||||  |||||| |||||||||||||||||| |||||||||||| ||    
T  51907281 aagttggatgaaatataaaacattgttaaaaacattggtggaagtatgttgtgttttaccttttt-aacttgattttaatgttgaaaacaaaaaattata 51907183  T
Q  668 tcgtct 673  Q
    | ||||    
T  51907182 ttgtct 51907177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 452 - 662
Target Start/End: Complemental strand, 17845217 - 17845008
Alignment:
Q  452 atttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtttag 551  Q
    ||||||| |||||  ||||||| ||||| |||| |||| |||||| || |  ||||||||||||| | | ||| |||||||||| || ||| ||||||      
T  17845217 atttgaaattttatggaatgataaaatcctagtgttttacatttcatagattatagaattactttttattcacgtttttaatttcgtttatattgtttga 17845118  T
Q  552 tgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttg 651  Q
    ||||||| ||||| ||||||||||||||||| |||| ||||||| ||| || |||| || ||||||||| | |  |||||| ||||  ||||||||||||    
T  17845117 tgaaaataaaattgtaatgttggatgaaatttaaaatattgtcgaaaacatggctagaaatatgttgtgctataccttttt-aactcaattttaatgttg 17845019  T
Q  652 gaaacaaaaaa 662  Q
     ||||||||||    
T  17845018 aaaacaaaaaa 17845008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 411 - 544
Target Start/End: Complemental strand, 6102254 - 6102121
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    ||||||||| || |||||| | ||||| |||||||| ||| | | |||||||||||||||| | |||||||||| |||| |||||| |||||||||| ||    
T  6102254 tttcttcttcgctttttatattaaaaaagtatttatttgctactggaacttttaaagaatgttaaaatcttagttttttgcatttcatacaaaataggat 6102155  T
Q  511 tactttctgtccacatttttaatttggtctatgt 544  Q
    |||||  ||||||||||||| |||| ||||||||    
T  6102154 tacttattgtccacattttttatttagtctatgt 6102121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 424 - 581
Target Start/End: Original strand, 35233025 - 35233183
Alignment:
Q  424 ttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtcca 523  Q
    ||||||||||||||| ||||||  ||| | ||||| | | | | |||||| |||||||| |||||| ||||||||||| |||| |||||| || ||||||    
T  35233025 ttttatttcaaaaatttatttacgtgctaattgaattgtcatataatgataaaatcttaatcttttacatttcttacataataaaattaccttttgtcca 35233124  T
Q  524 catttttaatttggtc--tatgttgtttagtgaaaatgaaattttaatgttggatgaaat 581  Q
    |  |||||||||||||  ||||||||| ||||| ||||||||| ||||||||||||||||    
T  35233125 c-gttttaatttggtctatatgttgttgagtgagaatgaaattgtaatgttggatgaaat 35233183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 235 - 351
Target Start/End: Original strand, 48292954 - 48293069
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||||||  ||||||||||| ||||||| ||||||||| |||| ||| ||||||| |||||||| ||| || ||||||||| |||||||||| |||||     
T  48292954 atgtattcggatcacttttttcctcaaccacatggtttggtttggtttgcggttttcattttacctacccaaacaaaccaaaccaaaccgcaagataag- 48293052  T
Q  335 aaaaacactaattaaat 351  Q
    |||||||||||||||||    
T  48293053 aaaaacactaattaaat 48293069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 235 - 353
Target Start/End: Complemental strand, 8485237 - 8485120
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    |||||||| ||||| || ||||||||||||||||||||| |  | ||| ||||||| |||||||||||| ||| |||||||| |||||||||| |||||     
T  8485237 atgtattcgaatcatttatttactcaaccgcatggtttggtccggtttgcggttttgattttaccaaccgaactaaaccaaaccaaaccgcaatataag- 8485139  T
Q  335 aaaaacactaattaaatat 353  Q
    |||||||||||| ||||||    
T  8485138 aaaaacactaatcaaatat 8485120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 235 - 353
Target Start/End: Complemental strand, 20986958 - 20986841
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||||||  |||| |||||||||||||||||| ||||| |||| |||  | |||| ||||||| |||| |||||||||||| |||||||||| |||||     
T  20986958 atgtattcggatcaattttttactcaaccgcattgtttggtttggtttgggattttgattttactaaccgaaccaaaccaaaccaaaccgcaatataag- 20986860  T
Q  335 aaaaacactaattaaatat 353  Q
    |||||||||||||||||||    
T  20986859 aaaaacactaattaaatat 20986841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 235 - 352
Target Start/End: Original strand, 23449509 - 23449625
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||||||  |||| |||||||||||||||||||||||| ||   ||| | ||||| |||||||||||| ||||||||||||||||| ||||| |||||     
T  23449509 atgtattcggatcatttttttactcaaccgcatggtttggttcagtttgcagttttgattttaccaaccgaaccaaaccaaatcaaatcgcaatataag- 23449607  T
Q  335 aaaaacactaattaaata 352  Q
    ||||||| ||||||||||    
T  23449608 aaaaacattaattaaata 23449625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 235 - 352
Target Start/End: Complemental strand, 28148323 - 28148207
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||||||| |||| |||||||| |||||||||| |||  || | ||| ||||||| ||||||| |||| |||||||||||||||||| |||| |||||     
T  28148323 atgtattcagatcatttttttacgcaaccgcatgattttgttcggtttgcggttttgattttactaaccgaaccaaaccaaatcaaactgcaatataag- 28148225  T
Q  335 aaaaacactaattaaata 352  Q
    ||||||||||||||||||    
T  28148224 aaaaacactaattaaata 28148207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 540 - 673
Target Start/End: Original strand, 48293252 - 48293383
Alignment:
Q  540 tatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttg 639  Q
    |||||||||| ||| |||||||||| |||||| | ||||| ||||||||||||||| ||| ||||||  || ||| | |||||||  |||||| |||| |    
T  48293252 tatgttgtttggtggaaatgaaattgtaatgtggaatgaa-ttaaaaacattgtcgaaaacattgctggaaatatttcgtgtttta-cttttttaactcg 48293349  T
Q  640 attttaatgttggaaacaaaaaattgtatcgtct 673  Q
    ||||||||||||||||||||||||||||| ||||    
T  48293350 attttaatgttggaaacaaaaaattgtattgtct 48293383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 251 - 360
Target Start/End: Complemental strand, 41260652 - 41260542
Alignment:
Q  251 tttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaa 350  Q
    ||||||||||||||||||||| | ||  ||||  ||||||||||||||||||| || ||||||||| ||||| ||||||||||| |||||||||||||||    
T  41260652 tttttactcaaccgcatggttcggttcaatttgtggtttttattttaccaaccgaatcaaaccaaaccaaactgcaacataaga-aaaacactaattaaa 41260554  T
Q  351 --tatgtcatct 360  Q
      ||||||||||    
T  41260553 cttatgtcatct 41260542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 528 - 662
Target Start/End: Complemental strand, 29700967 - 29700844
Alignment:
Q  528 tttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggc 627  Q
    ||||||||||| ||||||||| ||| ||||||||||| |||||||| |||||||  |||||||||||| |||||          ||||||||||||| |     
T  29700967 tttaatttggtttatgttgttgagtcaaaatgaaattgtaatgttgtatgaaatataaaacattgtcgaaaata----------tatgttgtgttttagg 29700878  T
Q  628 tttttaaacttgattttaatgttggaaacaaaaaa 662  Q
    ||||| |||||||||||||||||||||||||||||    
T  29700877 ttttt-aacttgattttaatgttggaaacaaaaaa 29700844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 454 - 548
Target Start/End: Original strand, 3666828 - 3666922
Alignment:
Q  454 ttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtt 548  Q
    |||||||||||||||||||| |||||||||| |||| || |||| | | ||||  |||||||| ||||||| |||||||||||||||||||||||    
T  3666828 ttgaacttttaaagaatgataaaatcttagtgttttgcacttctcatagaatatgattactttttgtccacctttttaatttggtctatgttgtt 3666922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 235 - 337
Target Start/End: Complemental strand, 3999313 - 3999211
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    |||||||  ||||||||| |||||||||| ||||||||| || | ||| |||||||||||||||||||  ||  |||||||| |||||||||||||||||    
T  3999313 atgtatttgaatcactttcttactcaaccacatggtttggttcggtttgcggtttttattttaccaactgaattaaaccaaaccaaaccgcaacataaga 3999214  T
Q  335 aaa 337  Q
    |||    
T  3999213 aaa 3999211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 27743890 - 27743779
Alignment:
Q  238 tattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaa 337  Q
    ||||||||||| ||||| |||||||||||||| ||| |||| ||| ||||||| |||||||||||  |||||||||||| ||| |||||  |||||  ||    
T  27743890 tattcaaatcaatttttcactcaaccgcatgggttggtttggtttgcggttttaattttaccaactgaaccaaaccaaaccaatccgcagtataag--aa 27743793  T
Q  338 aacactaattaaat 351  Q
    ||||||||||||||    
T  27743792 aacactaattaaat 27743779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 526 - 655
Target Start/End: Complemental strand, 40494674 - 40494547
Alignment:
Q  526 tttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttg 625  Q
    ||||||||||||| |||||||||   ||||||| ||||| | ||||||||||||||| |||| ||| | |||||  ||||| ||| |||||||||||||     
T  40494674 tttttaatttggtttatgttgttggatgaaaataaaattgtgatgttggatgaaatttaaaatatttttggaaaccttgctgaaaatatgttgtgttttt 40494575  T
Q  626 gctttttaaacttgattttaatgttggaaa 655  Q
    ||||||  ||||||| ||||||||||||||    
T  40494574 gctttt--aacttgactttaatgttggaaa 40494547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 411 - 673
Target Start/End: Complemental strand, 49641199 - 49640951
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttcca-tttcttacaaaatagaa 509  Q
    |||||| ||||| ||| | ||||||||||||||||| ||  | ||||||||||| | |||||| ||||||||||||||| || ||| ||||| |||| ||    
T  49641199 tttcttttttgcttttcacttcaaaaatgtatttatgtgttacttgaacttttagataatgataaaatcttagtcttttacatttttttacataatataa 49641100  T
Q  510 ttactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaa 609  Q
    ||| | | || ||||  ||||||||| |||||||||||||  |||||||||||  | ||||| |||| |||||||            |||||||| | ||    
T  49641099 ttattgtttgaccac-gttttaatttcgtctatgttgtttgatgaaaatgaaa-gtgaatgtaggataaaattaa------------aaatattgttgaa 49641014  T
Q  610 attatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    | |||||||||||||  || ||| |||||||||||||||||||||| |||||||||||| ||||    
T  49641013 aatatgttgtgttttaactcttt-aacttgattttaatgttggaaaaaaaaaattgtattgtct 49640951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 475 - 623
Target Start/End: Original strand, 7784322 - 7784464
Alignment:
Q  475 aaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttgg 574  Q
    |||||||||||| || ||||||||||||||||  |||||||| ||||||  |||||||||||||||||||||||       ||||||||| |||||||||    
T  7784322 aaatcttagtctattacatttcttacaaaatatgattactttttgtccatgtttttaatttggtctatgttgtt------gaatgaaattgtaatgttgg 7784415  T
Q  575 atgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttt 623  Q
    | ||||||  ||||||| | ||||| |||| |  ||||| |||||||||    
T  7784416 aagaaatttgaaacattcttggaaacattgttgcaattaagttgtgttt 7784464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 200 - 400
Target Start/End: Complemental strand, 45464752 - 45464548
Alignment:
Q  200 aatcgaaactgcaaaaagctgtatttggtttcgatatgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttacc 299  Q
    ||||||||||||||||| ||| ||||||||  |||||  |||   ||||||||||||||||| | ||||||||| ||  |||||||||||| |||||| |    
T  45464752 aatcgaaactgcaaaaaactgcatttggttcagatat--atttggatcacttttttactcaatcacatggtttggttcaatttacggttttgattttatc 45464655  T
Q  300 aacc-----aaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaatatgtc--atctgcgccaatactcgtaaaaacccaatgaaaact 392  Q
    ||||     |||||||||||||||||||||||| ||||||||||  ||| ||||||||| |   ||||   ||||||||| || |||  |||||||||||    
T  45464654 aaccgaaccaaaccaaaccaaatcaaaccgcaatataagaaaaat-actgattaaatatatataatctaaaccaatactcatagaaattcaatgaaaact 45464556  T
Q  393 ttcataaa 400  Q
    || |||||    
T  45464555 ttaataaa 45464548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 253 - 353
Target Start/End: Complemental strand, 41325936 - 41325837
Alignment:
Q  253 tttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaata 352  Q
    |||||||||| |||||||||| || | ||| | ||||| |||||||||||| |||||||||||| |||||||||| ||||| |||||||||||||| |||    
T  41325936 tttactcaactgcatggtttggttcggtttgcagttttgattttaccaaccgaaccaaaccaaaccaaaccgcaatataag-aaaaacactaattagata 41325838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 411 - 541
Target Start/End: Complemental strand, 8485040 - 8484910
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatga-tgaaatcttagtcttttccatttcttacaaaatagaa 509  Q
    |||||||||||| |||| | |||| ||||||||||||||| | ||||||| ||| ||||||| | |||| |||||||||| ||||||||| ||||||  |    
T  8485040 tttcttctttgctttttctatcaataatgtatttatatgctacttgaactcttagagaatgattaaaattttagtcttttgcatttcttataaaatatga 8484941  T
Q  510 ttactttctgtccacatttttaatttggtcta 541  Q
    ||||||| ||||||   |||||||||||||||    
T  8484940 ttactttttgtcca-tgttttaatttggtcta 8484910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 203 - 353
Target Start/End: Original strand, 48653398 - 48653546
Alignment:
Q  203 cgaaactgcaaaaagctgtatttggtttcgatatgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaac 302  Q
    |||||||||||||||  | ||||||||  |||  |||||  ||||| ||||||||||||| |||||||||| || | |||  | |||| |||||  |||     
T  48653398 cgaaactgcaaaaagtcgcatttggttcggat--gtatttgaatcatttttttactcaactgcatggtttggttcggtttgtgattttgattttgtcaat 48653495  T
Q  303 caaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaatat 353  Q
    | |||||||||||| |||||||||| |||||||||||| ||||||||||||    
T  48653496 cgaaccaaaccaaaccaaaccgcaatataagaaaaaacgctaattaaatat 48653546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 286 - 545
Target Start/End: Original strand, 1920158 - 1920426
Alignment:
Q  286 gtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaat--------atgtcatctgcgccaatactcgtaaa 377  Q
    |||||||||||||||| |||||||| ||||| |||| | |||||||||||||| || |||||||||        |||||| ||  || ||||||| ||||    
T  1920158 gtttttattttaccaatcaaaccaacccaaaccaaaacacaacataagaaaaa-cattaattaaatctatgtcaatgtcacctaggcaaatactcataaa 1920256  T
Q  378 aacccaatgaaaactttcataaatgacatatatt----ttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgat 473  Q
    ||| ||||||||||||| ||||||  |   | ||    || ||||| || |||||||| |||||||| |||| | || | ||||||||||| ||||| ||    
T  1920257 aactcaatgaaaacttttataaatttctcttcttaagtttgttcttcgctttttatttaaaaaatgtgtttaga-gctacttgaacttttagagaataat 1920355  T
Q  474 gaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgtt 545  Q
     ||||||||  ||||| ||||||||||    ||| |||||||| ||||||| ||||||||||||||||||||    
T  1920356 aaaatcttaa-cttttacatttcttaccgtctaggattactttttgtccacgtttttaatttggtctatgtt 1920426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 45983868 - 45983787
Alignment:
Q  257 ctcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaa 338  Q
    ||||||| ||||||||| |||| ||| ||||||| |||||||||||| || ||||||||| |||||||||||||| ||||||    
T  45983868 ctcaaccacatggtttggtttggtttgcggttttcattttaccaaccgaatcaaaccaaaccaaaccgcaacatatgaaaaa 45983787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 245 - 353
Target Start/End: Original strand, 23625449 - 23625551
Alignment:
Q  245 atcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacacta 344  Q
    |||| ||||||| ||||||| || ||||| |||| ||| ||||||| |||||||||||||||||||||     |||||||||| ||||| ||||||||||    
T  23625449 atcatttttttattcaaccgtatagtttggtttggtttgcggttttgattttaccaaccaaaccaaac-----caaaccgcaatataag-aaaaacacta 23625542  T
Q  345 attaaatat 353  Q
    |||||||||    
T  23625543 attaaatat 23625551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 411 - 522
Target Start/End: Complemental strand, 27743567 - 27743455
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatga-tgaaatcttagtcttttccatttcttacaaaatagaa 509  Q
    |||||||||||| |||| |||||||||||||||||| | | | ||||||| ||| ||||||| | |||| ||| ||||||  |||||||||||||||| |    
T  27743567 tttcttctttgctttttctttcaaaaatgtatttatgtactacttgaactcttagagaatgattaaaattttaatcttttgtatttcttacaaaatagga 27743468  T
Q  510 ttactttctgtcc 522  Q
    ||||||| |||||    
T  27743467 ttactttttgtcc 27743455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 407 - 593
Target Start/End: Original strand, 11031343 - 11031537
Alignment:
Q  407 atattttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaa-- 504  Q
    ||||||| ||| |||| ||| |||| |||||||||||||| ||| ||||||| ||||| |||||||| ||||||||||| |||  |||||||| | ||      
T  11031343 atatttttttcattgcttttaatttgaaaaatgtatttatgtgctatttgaaattttacagaatgat-aaatcttagtcgtttatatttcttaaacaaca 11031441  T
Q  505 -------tagaattactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgt 593  Q
           | | |||||||| | ||||  |||||||||| |||||| |||||||| |||||| ||| | ||||||| ||||||||| ||||||||||    
T  11031442 ggattacttggattactttttttccatgtttttaatttcgtctatattgtttagggaaaataaaaatgtaatgtttgatgaaatttaaaacattgt 11031537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 687 - 754
Target Start/End: Original strand, 18319550 - 18319616
Alignment:
Q  687 gcaccaaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaact 754  Q
    |||||||||||||||| ||||| ||||||||||||| |||||| || |||||||||||||||||||||    
T  18319550 gcaccaaccgatccaacccaaa-ccgcattggtttggtttggtacgaattttattttaaaagtcaact 18319616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 687 - 754
Target Start/End: Complemental strand, 18399131 - 18399065
Alignment:
Q  687 gcaccaaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaact 754  Q
    |||||||||||||||| ||||| ||||||||||||| |||||| || |||||||||||||||||||||    
T  18399131 gcaccaaccgatccaacccaaa-ccgcattggtttggtttggtacgaattttattttaaaagtcaact 18399065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 152 - 353
Target Start/End: Original strand, 1564494 - 1564703
Alignment:
Q  152 gggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaat------cgaaactgcaaaaagctgtatttggtttcgatatgtattcaaa 245  Q
    |||||||||||| | ||||||||||| |||||||  |||||||||||||||      |||||||||||||| | | ||||||||  |||  |||||   |    
T  1564494 gggtgtttaaaaccaaaccaatccaaaagaaaaatcgtaaactgaatcaattcaaatcgaaactgcaaaaaaccgcatttggttcggat--gtattggga 1564591  T
Q  246 tcacttttttactcaaccgcatggtttgatttgatttacggtttttattttacc-----aaccaaaccaaaccaaatcaaaccgcaacataagaaaaaac 340  Q
    | | | ||||| | |||||||||||||| || | ||| ||||||| ||||||||     ||||||||||||||||| ||||| |||| ||||| ||||||    
T  1564592 taattcttttagttaaccgcatggtttggttcggtttgcggttttgattttaccaactgaaccaaaccaaaccaaaccaaactgcaatataag-aaaaac 1564690  T
Q  341 actaattaaatat 353  Q
    | |||||||||||    
T  1564691 aataattaaatat 1564703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 411 - 540
Target Start/End: Original strand, 1564781 - 1564910
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaa-tcttagtcttttccatttcttacaaaatagaa 509  Q
    |||||||||||  |||||| |||||||||||||||| ||| | || || | | |||||||||| ||| | ||| ||||||  |||||||||||||||| |    
T  1564781 tttcttctttgttttttatatcaaaaatgtatttatgtgctacttaaaatctcaaagaatgattaaaattttactcttttgtatttcttacaaaatagga 1564880  T
Q  510 ttactttctgtccacatttttaatttggtct 540  Q
    ||| ||| |||||||| ||||||||||||||    
T  1564881 ttattttttgtccaca-ttttaatttggtct 1564910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 152 - 334
Target Start/End: Complemental strand, 35014918 - 35014732
Alignment:
Q  152 gggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatc------gaaactgcaaaaagctgtatttggtttcgatatgtattcaaa 245  Q
    ||||||| ||||||||||||||||||||||||||| | |||  |||||||||      |||| |||||||| |   |||||||   |||  ||||||  |    
T  35014918 gggtgttcaaaatcgaaccaatccaatagaaaaaccgcaaatcgaatcaatctaaatcgaaattgcaaaaaacgacatttggtccggat--gtattccga 35014821  T
Q  246 tcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
     || ||||||||||||||||||||||||  | ||||| |||||||||| ||| ||||  |||||  ||||| |||||||||||||||||    
T  35014820 ccatttttttactcaaccgcatggtttgggtcgatttgcggtttttatcttatcaactgaaccagtccaaaccaaaccgcaacataaga 35014732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 707 - 753
Target Start/End: Original strand, 36106422 - 36106468
Alignment:
Q  707 aaaccgcattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  36106422 aaaccgcattggtttggtttggttcggattttattttaaaagtcaac 36106468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 570 - 668
Target Start/End: Complemental strand, 48684991 - 48684894
Alignment:
Q  570 gttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtat 668  Q
    ||||||||||||  |||||||||| | ||| ||| || ||| ||| ||||||||| |||||||||  ||||||||||||||||||| ||||||||||||    
T  48684991 gttggatgaaatataaaacattgttgaaaacattactgaaactatattgtgttttagctttttaat-ttgattttaatgttggaaataaaaaattgtat 48684894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 475 - 548
Target Start/End: Complemental strand, 15724195 - 15724122
Alignment:
Q  475 aaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtt 548  Q
    ||||||||||||||| ||||||||| ||||||| ||||| || ||||||  ||||||| |||||||||||||||    
T  15724195 aaatcttagtcttttgcatttcttaaaaaataggattacattttgtccatgtttttaacttggtctatgttgtt 15724122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 540 - 673
Target Start/End: Original strand, 18536480 - 18536611
Alignment:
Q  540 tatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttg 639  Q
    |||||||||| |||||||||||| | |||||| | ||||| ||||||||||||||||||   || || ||| || ||||||||||  |||||||| || |    
T  18536480 tatgttgtttggtgaaaatgaaaatgtaatgtggaatgaagttaaaaacattgtcggaacc-ttactgaaaataagttgtgttttacctttttaa-ctcg 18536577  T
Q  640 attttaatgttggaaacaaaaaattgtatcgtct 673  Q
    | ||||| ||||||||||||| ||||||| ||||    
T  18536578 actttaaggttggaaacaaaatattgtattgtct 18536611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 686 - 754
Target Start/End: Complemental strand, 18396428 - 18396361
Alignment:
Q  686 tgcaccaaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaact 754  Q
    ||||||||||||||||| ||||| || |||||||||| ||| ||||||||||||| |||||||||||||    
T  18396428 tgcaccaaccgatccaacccaaa-ccacattggtttggttttgttcggattttatcttaaaagtcaact 18396361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 41312216 - 41312284
Alignment:
Q  245 atcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacc 313  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||| ||||||  || |||||||||||    
T  41312216 atcacttttttactcaaccgtatggttcgatttggtttacggttttcattttagaaatcaaaccaaacc 41312284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 250 - 314
Target Start/End: Complemental strand, 49641367 - 49641303
Alignment:
Q  250 ttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacca 314  Q
    |||||||||||||| | ||||||  |||| ||| |||||||||||||||||||||||||||||||    
T  49641367 ttttttactcaaccacgtggtttagtttggtttgcggtttttattttaccaaccaaaccaaacca 49641303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 245 - 332
Target Start/End: Original strand, 5121925 - 5122007
Alignment:
Q  245 atcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataa 332  Q
    |||| ||| ||||||||| |||||||||| ||||     ||||||| ||||||||||| ||||||||||||| |||||||||||||||    
T  5121925 atcattttcttactcaactgcatggtttggtttg-----cggttttcattttaccaactaaaccaaaccaaaccaaaccgcaacataa 5122007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 601 - 668
Target Start/End: Complemental strand, 8312069 - 8312003
Alignment:
Q  601 attgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtat 668  Q
    |||||| ||| | ||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||    
T  8312069 attgctgaaaatttgttgtgttttagctttttaa-cttgattttaatgttgtaaacaaaaaattgtat 8312003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 411 - 530
Target Start/End: Complemental strand, 13715081 - 13714964
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    |||||||||||| |||||||| |||||||| ||||| ||| | || |||| ||| ||||| || ||||| ||||||||| ||||||||||| |||||||     
T  13715081 tttcttctttgctttttattt-aaaaatgtctttatgtgccactt-aactgttagagaattattaaatcatagtcttttacatttcttacacaatagaaa 13714984  T
Q  511 tactttctgtccacattttt 530  Q
    |||||| | ||||| |||||    
T  13714983 tactttttttccactttttt 13714964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 18399562 - 18399495
Alignment:
Q  245 atcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaac 312  Q
    |||||||||||||||| |  ||||||||| |||| ||| || ||||||||||||||||||||||||||    
T  18399562 atcacttttttactcagcaacatggtttgctttggtttgcgttttttattttaccaaccaaaccaaac 18399495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 235 - 338
Target Start/End: Original strand, 18881577 - 18881680
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    |||||||| |||||||||| ||||||||||  | ||||| |||| ||| || ||||||||||| ||||  ||| ||||| || ||||||||||||||||     
T  18881577 atgtattcgaatcacttttatactcaaccgtgtagtttggtttggtttgcgatttttattttatcaactgaactaaaccgaaccaaaccgcaacataagt 18881676  T
Q  335 aaaa 338  Q
    ||||    
T  18881677 aaaa 18881680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 429 - 512
Target Start/End: Original strand, 48293161 - 48293244
Alignment:
Q  429 tttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaatta 512  Q
    |||||||||||||||||| ||| | ||||||||||| | ||| || |||||||| |||||| ||||||||||| |||| |||||    
T  48293161 tttcaaaaatgtatttatgtgctacttgaacttttagaaaataataaaatcttaatcttttacatttcttacataataaaatta 48293244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 411 - 506
Target Start/End: Original strand, 48602226 - 48602321
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaata 506  Q
    |||||||||| | ||||||||||||||| | ||||| ||| | ||||||||||| | |||||| |||||||||| |||| |||||  |||||||||    
T  48602226 tttcttctttactttttatttcaaaaatatgtttatgtgctacttgaacttttagataatgataaaatcttagttttttgcattttctacaaaata 48602321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 411 - 548
Target Start/End: Complemental strand, 4642813 - 4642676
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatga-tgaaatcttagtcttttccatttcttacaaaatagaa 509  Q
    |||||||||||| |||| | |||||||||||||||| ||| |  |||| | ||| ||||||| | |||| || ||||| |  |||||||| ||||||| |    
T  4642813 tttcttctttgctttttctatcaaaaatgtatttatgtgctacatgaattcttagagaatgattaaaatttttgtcttctgtatttcttataaaatagga 4642714  T
Q  510 ttactttctgtccacatttttaatttggtctatgttgtt 548  Q
    ||||||| |||||||  ||||||||||||||| ||||||    
T  4642713 ttactttttgtccac-gttttaatttggtctacgttgtt 4642676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 15985996 - 15986058
Alignment:
Q  152 gggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatcgaaactgcaaa 214  Q
    ||||||| ||||| ||||||||||||||||||||||||||||  |||||||| |||| |||||    
T  15985996 gggtgttcaaaattgaaccaatccaatagaaaaactgtaaaccaaatcaatccaaaccgcaaa 15986058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 411 - 532
Target Start/End: Complemental strand, 35014641 - 35014519
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttag-tcttttccatttcttacaaaatagaa 509  Q
    ||||||| |||  |||||||| |||||||||||||| ||| | || ||||| || |||||||| |||| |||| | |||| ||||||||||||||||  |    
T  35014641 tttcttcattgttttttatttaaaaaatgtatttatgtgctacttaaacttctagagaatgataaaattttagtttttttgcatttcttacaaaataaga 35014542  T
Q  510 ttactttctgtccacatttttaa 532  Q
    ||| ||| ||||||| |||||||    
T  35014541 ttattttttgtccacgtttttaa 35014519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 430 - 544
Target Start/End: Complemental strand, 53934995 - 53934882
Alignment:
Q  430 ttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttt 529  Q
    ||||||||||||||||| | | | ||||||||||| |  ||||| |||||||| |||||| | | ||||| ||||||  |||||||| | ||||||||||    
T  53934995 ttcaaaaatgtatttatgtactacttgaacttttagatgatgataaaatcttaatcttttgcctatcttataaaatatgattactttttatccacatttt 53934896  T
Q  530 taatttggtctatgt 544  Q
    | |||||||||||||    
T  53934895 t-atttggtctatgt 53934882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 3666612 - 3666681
Alignment:
Q  244 aatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacc 313  Q
    ||||||||| ||||||||| |||||||||| |||| ||| || ||||| |||||||||||||||| ||||    
T  3666612 aatcactttcttactcaactgcatggtttggtttggtttgcgatttttgttttaccaaccaaaccgaacc 3666681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 15724370 - 15724294
Alignment:
Q  257 ctcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaa 338  Q
    ||||||||||||||||| |||| ||| |  ||||||||||||||||| ||||||||     |||||||||||||||||||||    
T  15724370 ctcaaccgcatggtttggtttggtttgcaatttttattttaccaaccgaaccaaac-----caaaccgcaacataagaaaaa 15724294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 245 - 337
Target Start/End: Complemental strand, 53935193 - 53935101
Alignment:
Q  245 atcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaa 337  Q
    |||| |||| || ||| ||||||||||||| | |||||  ||||||||||||| |||   |||||||||||||||||  ||||||||||||||    
T  53935193 atcatttttatattcatccgcatggtttgagtggatttgtggtttttattttagcaatataaccaaaccaaatcaaattgcaacataagaaaa 53935101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 456 - 543
Target Start/End: Original strand, 54273785 - 54273873
Alignment:
Q  456 gaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctg-tccacatttttaatttggtctatg 543  Q
    ||||||||| |||||||| ||||||||| ||||| ||||||||||  || | |||| |||| || |||| |||||||||||||||||||    
T  54273785 gaacttttagagaatgataaaatcttaggcttttgcatttcttaccgaagaaaattgctttttggtccatatttttaatttggtctatg 54273873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 245 - 316
Target Start/End: Original strand, 18319115 - 18319186
Alignment:
Q  245 atcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaa 316  Q
    |||| |||||||||||| | ||||||||| |||| |   |||||||||||||||||||||||||||| ||||    
T  18319115 atcaattttttactcaatctcatggtttggtttggtccgcggtttttattttaccaaccaaaccaaatcaaa 18319186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 245 - 316
Target Start/End: Complemental strand, 18396874 - 18396803
Alignment:
Q  245 atcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaa 316  Q
    |||| |||||||||||| | ||||||||| |||| |   |||||||||||||||||||||||||||| ||||    
T  18396874 atcaattttttactcaatctcatggtttggtttggtccgcggtttttattttaccaaccaaaccaaatcaaa 18396803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 235 - 338
Target Start/End: Complemental strand, 40494968 - 40494867
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||||||||| || ||| |||||||||| |||||||| | ||| ||| |||||||  |||||||||| |||| |||||||| |||||  ||||||||||    
T  40494968 atgtattcaaa-cattttcttactcaaccacatggtttaagttggtttgcggttttc-ttttaccaacgaaactaaaccaaaacaaactacaacataaga 40494871  T
Q  335 aaaa 338  Q
    ||||    
T  40494870 aaaa 40494867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 250 - 313
Target Start/End: Original strand, 54273473 - 54273536
Alignment:
Q  250 ttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacc 313  Q
    ||||||||||||||||||| || | |||| ||| |||||||||||||| ||||| |||||||||    
T  54273473 ttttttactcaaccgcatgattcggtttggtttgcggtttttattttagcaaccgaaccaaacc 54273536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 350
Target Start/End: Original strand, 23119751 - 23119940
Alignment:
Q  160 aaaatcgaaccaatccaatagaaaaactgtaaactgaatcaa------tcgaaactgcaaaaagctgtatttggtttcgatatgtattcaaatcactttt 253  Q
    |||| |||||||||||||||| ||||||| |||| |||||||      |||||||  |||||| | | ||||||||  |||  ||| ||| |||| |||     
T  23119751 aaaaccgaaccaatccaataggaaaactgcaaaccgaatcaactcaaatcgaaaccacaaaaaaccgcatttggttaggat--gtaatcagatcattttc 23119848  T
Q  254 ttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaa 350  Q
    || |||||||||||| |||| || | ||| || |||| |||||||||||| ||| ||||     |||||||||||||||||||||| | ||||||||    
T  23119849 ttgctcaaccgcatgatttggttcggtttgcgattttcattttaccaaccgaactaaac-----caaaccgcaacataagaaaaaatattaattaaa 23119940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 482 - 548
Target Start/End: Original strand, 23120033 - 23120099
Alignment:
Q  482 agtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtt 548  Q
    |||||||| |||||| || ||||||||||||| || ||||||  ||||||| |||||||||||||||    
T  23120033 agtcttttgcatttcatagaaaatagaattacgttttgtccatgtttttaacttggtctatgttgtt 23120099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 607 - 673
Target Start/End: Original strand, 23120159 - 23120224
Alignment:
Q  607 aaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    |||| |||||||||||||  |||||||| || |||||||||||||||||||||||| | ||||||||    
T  23120159 aaaaatatgttgtgttttaactttttaacct-gattttaatgttggaaacaaaaaaatttatcgtct 23120224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 597 - 662
Target Start/End: Complemental strand, 45983565 - 45983500
Alignment:
Q  597 aaatattgct-aaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaa 662  Q
    |||||||||| |||| |||||||||||||  |||||||| || ||||||||||||||||||||||||    
T  45983565 aaatattgctgaaaaatatgttgtgttttaactttttaacct-gattttaatgttggaaacaaaaaa 45983500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 475 - 544
Target Start/End: Original strand, 48653630 - 48653700
Alignment:
Q  475 aaatcttagtcttttccatttcttacaaaatagaattactttct-gtccacatttttaatttggtctatgt 544  Q
    |||||||||||||||  |||||| ||||||||  |||||||| | |||||| |||||||||||||||||||    
T  48653630 aaatcttagtcttttgtatttctaacaaaataagattacttttttgtccacgtttttaatttggtctatgt 48653700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 612 - 673
Target Start/End: Complemental strand, 6102053 - 6101993
Alignment:
Q  612 tatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    |||||||||||||  | |||||| |||||||||| |||||||||||||||||||||| ||||    
T  6102053 tatgttgtgttttatccttttaa-cttgattttactgttggaaacaaaaaattgtattgtct 6101993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 541
Target Start/End: Original strand, 23625637 - 23625745
Alignment:
Q  433 aaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatctt-agtcttttccatttcttacaaaatagaattactttctgtccacattttta 531  Q
    |||||||||||||| ||| | ||||||| |||||  ||||| | || || |||||| |  |||||||| |||||||||||||||| |||||||  |||||    
T  23625637 aaaaatgtatttatctgctacttgaactcttaaatgatgattacatttttagtcttatgtatttcttataaaatagaattactttttgtccac-gtttta 23625735  T
Q  532 atttggtcta 541  Q
    ||||||||||    
T  23625736 atttggtcta 23625745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 629 - 673
Target Start/End: Original strand, 5122311 - 5122355
Alignment:
Q  629 ttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    |||| ||||||||||||||||| ||||||||||||||||| ||||    
T  5122311 tttttaacttgattttaatgttagaaacaaaaaattgtattgtct 5122355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 713 - 753
Target Start/End: Original strand, 5122393 - 5122433
Alignment:
Q  713 cattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    |||||||||| |||||||||||||||||||| |||||||||    
T  5122393 cattggtttggtttggttcggattttatttttaaagtcaac 5122433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 267 - 311
Target Start/End: Complemental strand, 12916894 - 12916850
Alignment:
Q  267 tggtttgatttgatttacggtttttattttaccaaccaaaccaaa 311  Q
    |||||||||||||||||| ||||||||||||  ||||||||||||    
T  12916894 tggtttgatttgatttacagtttttattttattaaccaaaccaaa 12916850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 431 - 499
Target Start/End: Complemental strand, 42199137 - 42199069
Alignment:
Q  431 tcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttctta 499  Q
    ||||| |||||||||| ||| | ||||||||||| ||||| || |||| |||||||||| |||||||||    
T  42199137 tcaaacatgtatttatgtgctacttgaacttttagagaataataaaattttagtcttttgcatttctta 42199069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 235 - 339
Target Start/End: Complemental strand, 45226900 - 45226796
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||||||| |||| || |||||||||||  ||| |||| |||  ||| || ||||||||||||| ||  |||||||| ||| ||||||||||||| | |    
T  45226900 atgtattcatatcatttctttactcaaccatatgatttggtttagtttgcgatttttattttacccactgaaccaaactaaaccaaaccgcaacattaaa 45226801  T
Q  335 aaaaa 339  Q
    |||||    
T  45226800 aaaaa 45226796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 476 - 548
Target Start/End: Complemental strand, 45983686 - 45983614
Alignment:
Q  476 aatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtt 548  Q
    ||||||| |||||| ||||||||| ||||||| ||||  || ||||||  ||||||| |||||||||||||||    
T  45983686 aatcttaatcttttgcatttcttagaaaataggattatgttttgtccatgtttttaacttggtctatgttgtt 45983614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 687 - 753
Target Start/End: Complemental strand, 21069149 - 21069079
Alignment:
Q  687 gcaccaaccgatccaatccaaaaccgcattggtttga-----tttggttcggattttattttaaaagtcaac 753  Q
    ||||||||| |||||||||||| ||||||||||||||     ||||||||| |||| |||||||||||||||    
T  21069149 gcaccaaccaatccaatccaaa-ccgcattggtttgagttggtttggttcgaatttaattttaaaagtcaac 21069079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 411 - 525
Target Start/End: Complemental strand, 28148132 - 28148017
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatga-tgaaatcttagtcttttccatttcttacaaaatagaa 509  Q
    |||||||||||| |||| | |||||||||||||||| ||| | ||| ||| | | ||||| | | |||| ||||||||||  |||||||||||||||  |    
T  28148132 tttcttctttgctttttctatcaaaaatgtatttatgtgctacttgcactctcagagaattattaaaattttagtcttttgaatttcttacaaaatatga 28148033  T
Q  510 ttactttctgtccaca 525  Q
    ||||||| | ||||||    
T  28148032 ttactttttatccaca 28148017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 266 - 313
Target Start/End: Complemental strand, 48685271 - 48685224
Alignment:
Q  266 atggtttgatttgatttacggtttttattttaccaaccaaaccaaacc 313  Q
    |||||||| |||||||| |||||||||||||||||||| || ||||||    
T  48685271 atggtttggtttgatttgcggtttttattttaccaaccgaatcaaacc 48685224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 607 - 673
Target Start/End: Complemental strand, 15724062 - 15723997
Alignment:
Q  607 aaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    |||| |||||||||||||  || ||||| || |||||||||||||||||||||||| | ||||||||    
T  15724062 aaaaatatgttgtgttttacctctttaacct-gattttaatgttggaaacaaaaaaatttatcgtct 15723997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 245 - 306
Target Start/End: Complemental strand, 17845411 - 17845345
Alignment:
Q  245 atcacttttttactcaaccgcatggtttgatttgatt-----tacggtttttattttaccaaccaaa 306  Q
    ||||||||||||||||| ||||||||||| |||||||     | |||||||||||||| ||||||||    
T  17845411 atcacttttttactcaatcgcatggtttggtttgattcgatttgcggtttttattttatcaaccaaa 17845345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 715 - 753
Target Start/End: Original strand, 19753532 - 19753570
Alignment:
Q  715 ttggtttgatttggttcggattttattttaaaagtcaac 753  Q
    |||||||| ||||||||| ||||||||||||||||||||    
T  19753532 ttggtttggtttggttcgaattttattttaaaagtcaac 19753570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 715 - 753
Target Start/End: Complemental strand, 19786274 - 19786236
Alignment:
Q  715 ttggtttgatttggttcggattttattttaaaagtcaac 753  Q
    |||||||| ||||||||| ||||||||||||||||||||    
T  19786274 ttggtttggtttggttcgaattttattttaaaagtcaac 19786236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 687 - 752
Target Start/End: Original strand, 23625880 - 23625949
Alignment:
Q  687 gcaccaaccgatccaatccaaaaccgcattggtttgatttgg-----ttcggattttattttaaaagtcaa 752  Q
    ||||||||||||||||||| ||||||||||| |||| |||||     ||| ||||||||||||||||||||    
T  23625880 gcaccaaccgatccaatcc-aaaccgcattgatttggtttgggttgattcagattttattttaaaagtcaa 23625949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 707 - 753
Target Start/End: Complemental strand, 28147859 - 28147813
Alignment:
Q  707 aaaccgcattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    |||||||||||||||| ||||| || |||| ||||||||||||||||    
T  28147859 aaaccgcattggtttggtttggatcagattatattttaaaagtcaac 28147813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 687 - 753
Target Start/End: Complemental strand, 29232846 - 29232786
Alignment:
Q  687 gcaccaaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    |||||||||||||||||||||| | ||||||||||      ||||||||||||||||||||||||||    
T  29232846 gcaccaaccgatccaatccaaatc-gcattggttta-----gttcggattttattttaaaagtcaac 29232786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 552 - 602
Target Start/End: Complemental strand, 29232962 - 29232912
Alignment:
Q  552 tgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatat 602  Q
    ||||||| ||||| ||||||||||||||||| |||||||||| | ||||||    
T  29232962 tgaaaataaaattgtaatgttggatgaaatttaaaacattgttgaaaatat 29232912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 235 - 353
Target Start/End: Complemental strand, 29233303 - 29233191
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||||||  |||| |||| | ||||||||||||||||| || | |||  |||||| |||||||||||| ||||||||      ||||| ||| |||||     
T  29233303 atgtattcggatcaattttcttctcaaccgcatggtttggttcggtttgtggttttaattttaccaaccgaaccaaac-----aaaaccccaatataag- 29233210  T
Q  335 aaaaacactaattaaatat 353  Q
    |||||||||||||||||||    
T  29233209 aaaaacactaattaaatat 29233191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 707 - 753
Target Start/End: Complemental strand, 42198863 - 42198817
Alignment:
Q  707 aaaccgcattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    ||||| |||| ||||| |||||||| |||||||||||||||||||||    
T  42198863 aaaccacattagtttggtttggttcagattttattttaaaagtcaac 42198817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 707 - 756
Target Start/End: Complemental strand, 6101962 - 6101913
Alignment:
Q  707 aaaccgcattggtttgatttggttcggattttattttaaaagtcaactaa 756  Q
    |||||||||||| ||| ||||||||  ||| |||||||||||||||||||    
T  6101962 aaaccgcattggattgctttggttcatattatattttaaaagtcaactaa 6101913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 284 - 313
Target Start/End: Complemental strand, 13715213 - 13715184
Alignment:
Q  284 cggtttttattttaccaaccaaaccaaacc 313  Q
    ||||||||||||||||||||||||||||||    
T  13715213 cggtttttattttaccaaccaaaccaaacc 13715184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 616 - 673
Target Start/End: Complemental strand, 26674280 - 26674224
Alignment:
Q  616 ttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    |||||||||  |||||||| || |||||||| ||||||||||||||||||||| ||||    
T  26674280 ttgtgttttacctttttaa-ctcgattttaaagttggaaacaaaaaattgtattgtct 26674224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 593
Target Start/End: Complemental strand, 45226589 - 45226548
Alignment:
Q  552 tgaaaatgaaattttaatgttggatgaaattaaaaacattgt 593  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||    
T  45226589 tgaaaatgaaattgtaatgtttgatgaaatttaaaacattgt 45226548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 707 - 748
Target Start/End: Original strand, 45578047 - 45578088
Alignment:
Q  707 aaaccgcattggtttgatttggttcggattttattttaaaag 748  Q
    ||||| ||||||||||||||||||||| || |||||||||||    
T  45578047 aaacctcattggtttgatttggttcggtttatattttaaaag 45578088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 688 - 753
Target Start/End: Original strand, 48293395 - 48293454
Alignment:
Q  688 caccaaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    ||||||||||||||| ||||| |||||||||||||     ||||||||||||||||||||| ||||    
T  48293395 caccaaccgatccaacccaaa-ccgcattggtttg-----gttcggattttattttaaaagacaac 48293454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 415 - 512
Target Start/End: Complemental strand, 48685113 - 48685016
Alignment:
Q  415 ttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaatta 512  Q
    |||||||  ||||||||||||||  | ||||| ||| | ||||||  ||| |||||| | |||||||| |||||| ||||||||||| ||||| ||||    
T  48685113 ttctttgttttttatttcaaaaacatttttatgtgctacttgaaccgttagagaatggtaaaatcttaatcttttacatttcttacataataggatta 48685016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 139; Significance: 3e-72; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 152 - 753
Target Start/End: Complemental strand, 13194548 - 13193932
Alignment:
Q  152 gggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatc------gaaactgcaaaaagctgtatttggtttcgatatgtattcaaa 245  Q
    |||||||||||| ||||| | ||||||||||||| ||||||||||| ||||       |||| || ||||| | ||||||| ||| |||  |||| |  |    
T  13194548 gggtgtttaaaaccgaacgagtccaatagaaaaattgtaaactgaaccaattcaaattgaaattgtaaaaaaccgtatttgatttggat--gtatccgga 13194451  T
Q  246 tcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaa 345  Q
    |||| ||||||||||||| ||||||||| |||||||| |||||||||||||||  ||| || ||||||||| |||||| |||||||||||||| |  |||    
T  13194450 tcacgtttttactcaaccacatggtttggtttgatttgcggtttttattttacggaccgaatcaaaccaaaccaaaccacaacataagaaaaa-ctttaa 13194352  T
Q  346 ttaaatatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaa-tgacatatattttct----------------tctttgcctttta 428  Q
    |||||||| ||| ||   ||||||||| || |||  ||||| ||||||| ||||| |||||||| ||||||                ||||||| |||||    
T  13194351 ttaaatatatcacctagaccaatactcatagaaaatcaatggaaacttttataaaatgacatattttttctctcttgttaagtttcttctttgcttttta 13194252  T
Q  429 tttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacattt 528  Q
    |||||||||| ||||||| ||| | || |||||||| |||||||| |||||||| ||||||  |||||||||| || ||||||||||| | ||||| |||    
T  13194251 tttcaaaaatatatttatgtgctaattaaacttttagagaatgataaaatcttaatcttttatatttcttacataaaagaattactttgtttccacgttt 13194152  T
Q  529 ttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggct 628  Q
    |||||||| | |||||||||| |||||||| ||||| ||||||   ||||||||||||||||||  ||||| ||||    || ||||| |||||||| ||    
T  13194151 ttaatttgatttatgttgtttggtgaaaataaaattgtaatgtgaaatgaaattaaaaacattgatggaaacattgtcggaactatgtggtgttttgcct 13194052  T
Q  629 ttttaaacttgattttaatgttggaaacaaaaaattgtatcgtctggtnnnnnnnnntgcaccaaccgatccaatccaaaaccgcattggtttgatttgg 728  Q
    |||| ||||  |||||||||||| ||||||||||||||||  ||| |           | |||||||||||||| || |||| |||||||||||||||||    
T  13194051 tttt-aactcaattttaatgttgaaaacaaaaaattgtattatcttg---aaaaaaccgtaccaaccgatccaa-cccaaactgcattggtttgatttgg 13193957  T
Q  729 ttcggattttattttaaaagtcaac 753  Q
    |||||||||||||||||||||||||    
T  13193956 ttcggattttattttaaaagtcaac 13193932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 424 - 753
Target Start/End: Complemental strand, 17763100 - 17762775
Alignment:
Q  424 ttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtcca 523  Q
    |||||||||||||||||| |||  ||| | |||||  |||| |||||||| |||| |||||||||| ||||||||| | ||||| |||||||| ||||||    
T  17763100 ttttatttcaaaaatgtacttacgtgctacttgaaaatttatagaatgat-aaatgttagtcttttacatttcttatataataggattactttttgtcca 17763002  T
Q  524 catttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttt 623  Q
    |||||||||||| |||||| |||||| |||||||| ||| | |||| |||||||||||| |||||||||||||||| |||||| ||| ||||||| |||     
T  17763001 catttttaatttcgtctatattgttttgtgaaaataaaactataatattggatgaaatttaaaacattgtcggaaacattgctgaaaatatgttgcgtta 17762902  T
Q  624 tggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtctggtnnnnnnnnntgcaccaaccgatccaatccaaaaccgcattggtttga 723  Q
    | |||||||||     ||||||||||||||||||||||||||||| |||| |           ||||||||| ||||||||| ||||| ||| |||||||    
T  17762901 tagctttttaactcaaattttaatgttggaaacaaaaaattgtattgtctcg--aaaaaaaccgcaccaaccaatccaatcc-aaaccacatcggtttga 17762805  T
Q  724 tttggttcggattttattttaaaagtcaac 753  Q
    ||||||||||||||||||||||||||||||    
T  17762804 tttggttcggattttattttaaaagtcaac 17762775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 235 - 654
Target Start/End: Original strand, 36500150 - 36500590
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaacca-aaccaaaccaaatcaaaccgcaacataag 333  Q
    ||||||||  |||| |||||||||||||||||| ||||| |||| ||| ||||||||||||||||||||  ||||||||||||||||||||||||||| |    
T  36500150 atgtattcggatcatttttttactcaaccgcatagtttggtttggttttcggtttttattttaccaacccgaaccaaaccaaatcaaaccgcaacata-g 36500248  T
Q  334 aaaaaacactaattaaat---atgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaa-tgacatatat-------------tttctt 416  Q
     ||||||||||||||||    |||||| ||   | ||||||  || |||| ||||||||||||| ||||| || ||||| |             ||||||    
T  36500249 caaaaacactaattaaaatcgatgtcacctagactaatactaatagaaactcaatgaaaacttttataaaatggcatatttgttctcttgtaagtttctt 36500348  T
Q  417 ctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattacttt 516  Q
    |||||| ||||||||||||| ||||||||| | | | ||||||||  | |||||||| ||||||| || |||| ||||||||||| |||||||||| |||    
T  36500349 ctttgctttttatttcaaaa-tgtatttatgttctacttgaacttacagagaatgataaaatcttggtattttacatttcttacacaatagaattaattt 36500447  T
Q  517 ctgtccacatttttaatttggtctatgttgttt------agtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaa 610  Q
     ||||||||||||||||||||| ||||||||||      | ||||||||||| | |||||| | ||||||||||||||||| ||||||| |||| | |||    
T  36500448 ttgtccacatttttaatttggtttatgttgtttggtgaaattgaaaatgaaaatgtaatgtggaatgaaattaaaaacattatcggaaacattgttgaaa 36500547  T
Q  611 ttatgttgtgttttggctttttaaacttgattttaatgttggaa 654  Q
     ||| ||| ||||| | ||||| |||| ||||||||||||||||    
T  36500548 atatattgcgttttaggttttt-aactcgattttaatgttggaa 36500590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 415 - 673
Target Start/End: Complemental strand, 1331356 - 1331115
Alignment:
Q  415 ttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattact 514  Q
    |||||| | ||||||||||||||| ||||||| ||| | ||||||||||||||||| || ||||||||||||||| ||||||||||| ||||||||||||    
T  1331356 ttctttactttttatttcaaaaatatatttatgtgctacttgaacttttaaagaataataaaatcttagtcttttacatttcttacataatagaattact 1331257  T
Q  515 ttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattat 614  Q
    || ||||||| ||||| |||||              ||| |||||||||| |||||| | ||| ||||||||| ||||||| |||||||||| ||| |||    
T  1331256 ttttgtccacgttttttatttg--------------gtggaaatgaaattgtaatgtagaatg-aattaaaaatattgtcgaaaatattgctgaaaatat 1331172  T
Q  615 gttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    ||||||||||  |||||  |||| |||||||||||||||||||||||||||||| ||||    
T  1331171 gttgtgttttacctttt--aactcgattttaatgttggaaacaaaaaattgtattgtct 1331115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 412 - 673
Target Start/End: Original strand, 27301209 - 27301457
Alignment:
Q  412 ttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaatt 511  Q
    ||||||||||| ||||||||||||||||||  ||| ||| | ||||||||||| |||||| | ||||||||||||||  | |||| |||| |||||||||    
T  27301209 ttcttctttgctttttatttcaaaaatgtagctatgtgctacttgaacttttagagaatgttaaaatcttagtctttaacctttcatacataatagaatt 27301308  T
Q  512 actttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaat 611  Q
     |||| ||||||| ||||||||||||| |||||||||| |||||||||||||| |||| |   ||||||||||||||||||||| |||||||            
T  27301309 gctttttgtccacgtttttaatttggtttatgttgtttggtgaaaatgaaattgtaatatgaaatgaaattaaaaacattgtcgaaaatatt-------- 27301400  T
Q  612 tatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
        |||||||||  |||||| |||| ||||||||| |||||||||||||||||||| ||||    
T  27301401 ----ttgtgttttaccttttt-aactcgattttaattttggaaacaaaaaattgtattgtct 27301457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 235 - 667
Target Start/End: Original strand, 12041125 - 12041562
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||||||  ||||||||||||||||||||||| ||||| |||| ||| ||||||| ||||||||||||||||||||||          |||||||||||    
T  12041125 atgtattcggatcacttttttactcaaccgcatagtttggtttggtttgcggttttcattttaccaaccaaaccaaacc----------gcaacataaga 12041214  T
Q  335 aaaaacactaattaaat--atgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaat-gacatatatttt---------------ctt 416  Q
    |||| |  |||||||||  |||||||||   ||| ||||| || |||| ||||||||||||| |||||  |||| || ||||               |||    
T  12041215 aaaa-ctttaattaaatctatgtcatctagaccattactcatagaaactcaatgaaaacttttataaaacgacaaatttttttctattataaagtttctt 12041313  T
Q  417 ctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattacttt 516  Q
    |||| | |||||||||||||||||||| || |||   |||||| |||| |||||||| |||| ||||| |||| |||||||| || ||||||||||||||    
T  12041314 ctttactttttatttcaaaaatgtattcatgtgctccttgaacctttagagaatgataaaatattagtattttacatttctttcataatagaattacttt 12041413  T
Q  517 ctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgt 616  Q
     | || |||||||||||||||| |||||||||  | |||||||||| ||||| ||   ||||||| |||||||||||| |||| ||||||  || |||||    
T  12041414 atatcaacatttttaatttggtttatgttgttcggagaaaatgaaagtttaacgtgaaatgaaatgaaaaacattgtc-gaaacattgctggaaatatgt 12041512  T
Q  617 tgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgta 667  Q
    ||| ||||  |||||| |||| ||||||||||||| ||| |||||||||||    
T  12041513 tgtattttaccttttt-aactcgattttaatgttgtaaataaaaaattgta 12041562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 211 - 668
Target Start/End: Original strand, 31719579 - 31720046
Alignment:
Q  211 caaaaagctgtatttggtttcgatatgtattcaaatcactttttt-actcaaccgcatggtttgatttgatttacg-gtttttattttaccaaccaaacc 308  Q
    |||||| ||| ||||||||| |||  ||||||  ||||||||||| |||| || ||||||||||||||| ||| || ||||| ||||||| |||| ||||    
T  31719579 caaaaaactgcatttggtttggat--gtattctgatcactttttttactctactgcatggtttgatttggtttgcgtgttttcattttactaaccgaacc 31719676  T
Q  309 aaaccaaatcaaaccgcaacataagaaaaaacactaattaaa---tatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaa-tgac 404  Q
    |||||||||||||||||||||||| ||||  |||||||||||   ||||| | ||   ||||||||  || |||| || || |||||||  |||| ||||    
T  31719677 aaaccaaatcaaaccgcaacataataaaac-cactaattaaaatatatgttacctagaccaatacttatagaaactcagtggaaacttttgtaaaatgac 31719775  T
Q  405 atatattttct-------------tctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttcc 491  Q
    |||| ||||||             ||| ||| |||||||| |||||| ||||||||||| | ||||||||||| |||||||| |||||| ||| |||| |    
T  31719776 atattttttctcttgttaagtttttctctgctttttattttaaaaatatatttatatgctacttgaacttttagagaatgat-aaatctaagtattttac 31719874  T
Q  492 atttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacatt 591  Q
    |||||||||  |||| ||||| ||| ||||||| ||||||| ||||| ||||| |||| |||||||||||| | |||||| | ||||||||| |||||||    
T  31719875 atttcttacgtaatataattaatttttgtccacgtttttaacttggtttatgtggtttggtgaaaatgaaaatgtaatgtggaatgaaattagaaacatt 31719974  T
Q  592 gtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtat 668  Q
        ||||  |||   ||| |||||| ||||||  |||||| |||| ||||||||||||||||||||||||||||||    
T  31719975 ----gaaaccttgtcgaaaatatgttttgttttaccttttt-aactcgattttaatgttggaaacaaaaaattgtat 31720046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 411 - 664
Target Start/End: Complemental strand, 22014327 - 22014085
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    |||||||||||| |||||  |||||||| ||||||| ||| | || |||||||||||||| || |||||||||||||||  |||||||||| |||| |||    
T  22014327 tttcttctttgctttttaagtcaaaaatatatttatgtgctacttaaacttttaaagaataataaaatcttagtcttttaaatttcttacataatataat 22014228  T
Q  511 tactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaa 610  Q
    |||||| ||| ||  ||||||||||| |||||||||||| || ||||||||| | ||||          |||||||||| ||||| ||| || | | |||    
T  22014227 tactttttgttcatgtttttaatttgatctatgttgtttggtaaaaatgaaagtgtaat----------attaaaaacaatgtcgaaaacatggttgaaa 22014138  T
Q  611 ttatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaatt 664  Q
     |||| |||||||| ||||||| |||| |||||||||||||||||| |||||||    
T  22014137 atatgctgtgttttagcttttt-aactcgattttaatgttggaaacgaaaaatt 22014085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 152 - 338
Target Start/End: Original strand, 5862108 - 5862292
Alignment:
Q  152 gggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatcgaaactgcaaaaagctgtatttggtttcgatatgtattcaaatcactt 251  Q
    ||||||| |||| ||||||||| |||||||||||| | ||| |||| ||||| |||| |||||||   | ||||||||  |  ||||||||| | |||||    
T  5862108 gggtgttcaaaaccgaaccaattcaatagaaaaaccgcaaattgaaccaatccaaaccgcaaaaaatcgcatttggttcgg--atgtattcagagcactt 5862205  T
Q  252 ttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaa 338  Q
    ||||||||||||||||| |||| || | |||  |||||| ||||||||||||||||||||||||| |||||||||| ||||||||||    
T  5862206 ttttactcaaccgcatgttttggttcggtttgtggttttgattttaccaaccaaaccaaaccaaaccaaaccgcaatataagaaaaa 5862292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 411 - 753
Target Start/End: Complemental strand, 28790877 - 28790539
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    |||||||||||  ||||||||||||||| ||||||| | | | ||||| ||||| | ||  |  ||||| |||| |||| ||||||||| | ||||||||    
T  28790877 tttcttctttgttttttatttcaaaaatatatttatgttctacttgaaattttatacaaatacaaaatcatagtgttttacatttcttatataatagaat 28790778  T
Q  511 tactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaa 610  Q
    |||| | |||  |  |||||||||| || ||| ||||||  ||||||| |||||  |||||||||||||||| |||| ||||||   || |||| |  ||    
T  28790777 tactatttgttaatgtttttaatttcgtttatattgtttgttgaaaataaaattgcaatgttggatgaaatttaaaatattgtcaagaacattgttggaa 28790678  T
Q  611 ttatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtctggtnnnnnnnnntgcaccaaccgatccaatccaaaac 710  Q
     ||||||||||| | ||||||||| || ||||||||||||||||||||||||||||||  ||| |           |||||||||||||| | || ||||    
T  28790677 atatgttgtgttatagctttttaa-ctcgattttaatgttggaaacaaaaaattgtattatctcg--gaaaaaaccgcaccaaccgatccga-cccaaac 28790582  T
Q  711 cgcattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    | |||||||||| ||||||| ||||||||||||||||||||||    
T  28790581 cacattggtttggtttggtttggattttattttaaaagtcaac 28790539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 418 - 662
Target Start/End: Original strand, 30759356 - 30759599
Alignment:
Q  418 tttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttc 517  Q
    ||||| ||||||||||||||| ||||||| | | | ||||| ||||| |||||||| |||||||| | |||| ||||||||||| |||||||||||  |     
T  30759356 tttgctttttatttcaaaaatatatttatgtactacttgaaattttatagaatgataaaatcttaatgttttacatttcttacataatagaattacaatt 30759455  T
Q  518 tgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgtt 617  Q
    | |  ||  ||||||||| || ||| |||||| |||||||| ||||| ||||||||||||||||| |||| ||||||| ||| |||| |  || | ||||    
T  30759456 tttttacgcttttaatttcgtttatattgtttggtgaaaataaaattgtaatgttggatgaaatttaaaatattgtcgaaaacattgttggaaatgtgtt 30759555  T
Q  618 gtgttttggctttttaaacttgattttaatgttggaaacaaaaaa 662  Q
    ||||| |  |||||| ||||   |||||||||||||||| |||||    
T  30759556 gtgttataacttttt-aactcagttttaatgttggaaaccaaaaa 30759599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 239 - 351
Target Start/End: Complemental strand, 41166709 - 41166598
Alignment:
Q  239 attcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaa 338  Q
    ||||| |||||||||| ||||||||||||||||||||||| ||| ||||||| |||||||||||| |||||||||||| |||||| ||||||||  ||||    
T  41166709 attcagatcactttttcactcaaccgcatggtttgatttggtttgcggttttcattttaccaaccgaaccaaaccaaaccaaaccacaacataa-taaaa 41166611  T
Q  339 acactaattaaat 351  Q
     ||||||||||||    
T  41166610 gcactaattaaat 41166598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 466 - 661
Target Start/End: Complemental strand, 11651155 - 11650962
Alignment:
Q  466 agaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattt 565  Q
    |||||||| ||||||| ||||||| ||||||||||||||||| |||| ||| |  ||||||||| ||||| |||||| |||||| |||||||| |||||     
T  11651155 agaatgat-aaatcttggtcttttacatttcttacaaaataggattattttttacccacattttaaattttgtctatattgttttgtgaaaataaaattg 11651057  T
Q  566 taatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaa 661  Q
    |||| || ||||||||| |||||||||||| ||| |||| | ||| ||| || | || | ||||||| |||| |||||||||||||| | ||||||    
T  11651056 taatattagatgaaatttaaaacattgtcgaaaacattgttgaaaatatatttttttatagcttttt-aactcgattttaatgttggtagcaaaaa 11650962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 433 - 544
Target Start/End: Original strand, 11377398 - 11377509
Alignment:
Q  433 aaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaa 532  Q
    |||||||||||||| ||| ||||||||||||| |||||||| |||||||||||||||  |||||||||| ||||| |||| ||| |||||||| |||||     
T  11377398 aaaaatgtatttatgtgctatttgaacttttagagaatgataaaatcttagtcttttgtatttcttacagaataggattattttttgtccacaattttag 11377497  T
Q  533 tttggtctatgt 544  Q
    ||| ||||||||    
T  11377498 tttagtctatgt 11377509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 460 - 593
Target Start/End: Original strand, 27962438 - 27962569
Alignment:
Q  460 ttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtttagtgaaaatg 559  Q
    ||||| |||| |||||||||| | |||||| |||| |||||  ||||||| ||||||  |||||||||||||||||||| |||||| |||  |||||||     
T  27962438 ttttagagaacgatgaaatctcaatcttttacattacttacctaatagaaatacttt--gtccacatttttaatttggtgtatgttttttgatgaaaata 27962535  T
Q  560 aaattttaatgttggatgaaattaaaaacattgt 593  Q
    ||||| ||| ||||||||||||||||||||||||    
T  27962536 aaattgtaacgttggatgaaattaaaaacattgt 27962569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 475 - 662
Target Start/End: Original strand, 30761528 - 30761714
Alignment:
Q  475 aaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttgg 574  Q
    |||||||||| |||| |||||||||||  ||||||||||  | ||| ||| ||||| |||| || ||| |||||| |||||||| ||||| |||||||||    
T  30761528 aaatcttagtgttttacatttcttacatgatagaattacaatttgttcacgttttttattttgtttatattgttttgtgaaaataaaattgtaatgttgg 30761627  T
Q  575 atgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaa 662  Q
    |||||||| |||| ||||||  ||| |||| |  || |||||| |||| |  |||||| |||| ||||||||||||||||| ||||||    
T  30761628 atgaaatttaaaatattgtctaaaacattgttggaaatatgttatgttataacttttt-aactcgattttaatgttggaaataaaaaa 30761714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 414 - 546
Target Start/End: Complemental strand, 36964350 - 36964216
Alignment:
Q  414 cttctttgccttttatttcaaaaatgtat--ttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaatt 511  Q
    ||||||| | ||||||||||| |||||||  |||| ||||| ||||||||||  |||||||| |||||||||||||||  | |||||||| ||||  |||    
T  36964350 cttcttttctttttatttcaacaatgtatacttatgtgcaagttgaactttttgagaatgataaaatcttagtcttttatacttcttacataatatgatt 36964251  T
Q  512 actttctgtccacatttttaatttggtctatgttg 546  Q
    | |||||||| || |||||||||| ||||||||||    
T  36964250 aatttctgtcaacgtttttaattttgtctatgttg 36964216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 411 - 516
Target Start/End: Original strand, 15320306 - 15320412
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaac-ttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaa 509  Q
    |||||||||||| ||||||||||||| ||||||||||||| | |||||| |||||  ||||| | |||||||||||||||  |||||||||||||||  |    
T  15320306 tttcttctttgcattttatttcaaaagtgtatttatatgctacttgaactttttagtgaatgttaaaatcttagtcttttgtatttcttacaaaatatga 15320405  T
Q  510 ttacttt 516  Q
    |||||||    
T  15320406 ttacttt 15320412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 155 - 312
Target Start/End: Original strand, 27300942 - 27301103
Alignment:
Q  155 tgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatc------gaaactgcaaaaagctgtatttggtttcgatatgtattcaaatca 248  Q
    |||| ||||||||||||||| ||||||||||| | |||| ||| |||||      ||||| ||||||| | | ||||| ||| |||  ||||||  ||||    
T  27300942 tgttcaaaatcgaaccaatctaatagaaaaaccgcaaaccgaaccaatccaaatcgaaaccgcaaaaaaccgcatttgatttggat--gtattcggatca 27301039  T
Q  249 cttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaac 312  Q
    ||||||| ||||||||||||||||| |||| ||| ||||||| ||||||| |||||||||||||    
T  27301040 cttttttcctcaaccgcatggtttggtttggtttgcggttttcattttacaaaccaaaccaaac 27301103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 540 - 673
Target Start/End: Original strand, 6946403 - 6946523
Alignment:
Q  540 tatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttg 639  Q
    |||||||||  |||||||||||||||||||||||||||||||  |||||||||| |||||            || ||||||||||  |||||| ||||||    
T  6946403 tatgttgttgggtgaaaatgaaattttaatgttggatgaaatataaaacattgttggaaa------------taagttgtgttttaccttttt-aacttg 6946489  T
Q  640 attttaatgttggaaacaaaaaattgtatcgtct 673  Q
    ||||||||||||||||||||||||||||| ||||    
T  6946490 attttaatgttggaaacaaaaaattgtattgtct 6946523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 424 - 602
Target Start/End: Original strand, 11051136 - 11051314
Alignment:
Q  424 ttttatttcaaaa-atgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtcc 522  Q
    ||||||||||||| |||||||||||||| | ||||||||||| |||||||| |||| | ||| | ||  |||||||||| ||||| |||||||| |||||    
T  11051136 ttttatttcaaaaaatgtatttatatgctacttgaacttttagagaatgataaaatatcagtttgttgtatttcttacataataggattacttt-tgtcc 11051234  T
Q  523 acatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatat 602  Q
    |  |||| || |||||||||||||||   || | | |||||| |||| || |||||||||  ||||||||| | ||||||    
T  11051235 atgttttcaacttggtctatgttgttggatggagacgaaattgtaatcttcgatgaaatttcaaacattgttgaaaatat 11051314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 250 - 353
Target Start/End: Complemental strand, 12884917 - 12884815
Alignment:
Q  250 ttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaa 349  Q
    |||||||||||| ||||||||||| || | |||  |||||| |||||||||||  |||||||||||| |||||||||| ||| | |||||||||||||||    
T  12884917 ttttttactcaatcgcatggtttggttcggtttggggttttgattttaccaactgaaccaaaccaaaccaaaccgcaatatatg-aaaaacactaattaa 12884819  T
Q  350 atat 353  Q
    ||||    
T  12884818 atat 12884815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 408 - 547
Target Start/End: Original strand, 30514656 - 30514793
Alignment:
Q  408 tattttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatag 507  Q
    ||||||||||||| | ||||||||||||| ||||||||| || | || ||||||||| |||||||| |||||||| ||||||  ||||||| || ||||     
T  30514656 tattttcttcttttctttttatttcaaaa-tgtatttatgtgtactt-gaacttttagagaatgataaaatcttaatcttttgtatttcttgcagaatat 30514753  T
Q  508 aattactttctgtccacatttttaatttggtctatgttgt 547  Q
     |||| ||| ||||||| ||||||| || |||||||||||    
T  30514754 tattagtttttgtccacgtttttaagttagtctatgttgt 30514793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 433 - 548
Target Start/End: Complemental strand, 44085832 - 44085717
Alignment:
Q  433 aaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaa 532  Q
    |||||||||||||| ||| | ||||| ||||| |||||||| |||||| ||||||||  |||||||||||||||| ||||| || |||| |   ||||||    
T  44085832 aaaaatgtatttatgtgctacttgaaattttagagaatgataaaatctcagtcttttgtatttcttacaaaataggattacgttttgtctatgcttttaa 44085733  T
Q  533 tttggtctatgttgtt 548  Q
     |||||||||||||||    
T  44085732 attggtctatgttgtt 44085717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 687 - 753
Target Start/End: Complemental strand, 41461180 - 41461115
Alignment:
Q  687 gcaccaaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    |||||||||||| ||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||    
T  41461180 gcaccaaccgattcaatccaaa-ccgcattggtttggtttggttcgaattttattttaaaagtcaac 41461115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 260 - 338
Target Start/End: Complemental strand, 44086023 - 44085945
Alignment:
Q  260 aaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaa 338  Q
    |||||||||||||| |||| |||  |||||| |||| ||||||| |||||||||||| |||||||||||||||||||||    
T  44086023 aaccgcatggtttggtttggtttgtggttttcatttcaccaaccgaaccaaaccaaaccaaaccgcaacataagaaaaa 44085945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 235 - 316
Target Start/End: Complemental strand, 11678538 - 11678457
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaa 316  Q
    ||||||||  |||| |||||||| | ||||||||||||| |||| ||| ||||||| |||||||||||||||||||||||||    
T  11678538 atgtattcgtatcaattttttacgcgaccgcatggtttggtttggtttgcggttttgattttaccaaccaaaccaaaccaaa 11678457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 235 - 351
Target Start/End: Complemental strand, 1331545 - 1331435
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||||||  ||||||||||| ||||||| ||||||||| |||| ||| | |||||||||||| ||||  ||||||||     ||||||||||||||||     
T  1331545 atgtattcggatcacttttttcctcaaccacatggtttggtttggtttgccgtttttattttatcaactgaaccaaac-----caaaccgcaacataag- 1331452  T
Q  335 aaaaacactaattaaat 351  Q
    |||||||||||||||||    
T  1331451 aaaaacactaattaaat 1331435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 523 - 602
Target Start/End: Original strand, 24725637 - 24725715
Alignment:
Q  523 acatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatat 602  Q
    ||||||||||||| ||||||||||||  |||||||||||| ||||||||||||||||||  |||||||||  ||||||||    
T  24725637 acatttttaatttagtctatgttgttgggtgaaaatgaaa-tttaatgttggatgaaatataaaacattgctggaaatat 24725715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 411 - 489
Target Start/End: Complemental strand, 41166521 - 41166443
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtctttt 489  Q
    |||||||||||| |||||| |||||||| ||||||||||| | ||||||||||| ||||| || |||||||||| ||||    
T  41166521 tttcttctttgctttttatgtcaaaaatatatttatatgctacttgaacttttagagaataataaaatcttagtatttt 41166443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 469 - 602
Target Start/End: Original strand, 21734276 - 21734408
Alignment:
Q  469 atgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaa 568  Q
    ||||| |||| ||| |||||| ||||||||||| ||||  ||||| || |||||| |||||||||| |||||| || ||||  ||||  ||||||| |||    
T  21734276 atgataaaatattattcttttacatttcttacagaatatgattaccttttgtccatatttttaattgggtcta-gtagtttgatgaagttgaaattgtaa 21734374  T
Q  569 tgttggatgaaattaaaaacattgtcggaaatat 602  Q
    ||| || ||||||| |||||||||| ||||||||    
T  21734375 tgtagggtgaaatttaaaacattgttggaaatat 21734408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 267 - 338
Target Start/End: Complemental strand, 12841869 - 12841798
Alignment:
Q  267 tggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaa 338  Q
    ||||||| |||| ||| ||||||| |||||||||||| | |||||||||| || ||||||||||||||||||    
T  12841869 tggtttggtttggtttgcggttttcattttaccaaccgatccaaaccaaaccacaccgcaacataagaaaaa 12841798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 235 - 302
Target Start/End: Original strand, 30759183 - 30759250
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaac 302  Q
    ||||||| | ||||||||||||||||||||||||||||| || |||||||  |||||| |||||||||    
T  30759183 atgtatttagatcacttttttactcaaccgcatggtttggttcgatttacaatttttactttaccaac 30759250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 411 - 541
Target Start/End: Complemental strand, 43452489 - 43452364
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    ||||||| |||| ||||||| ||||| |||||| |||||| | |||||||||||  ||||| | |||||||||||||     ||||||| ||||||  ||    
T  43452489 tttcttcattgcattttattgcaaaagtgtattcatatgctacttgaacttttagtgaatgttaaaatcttagtctt-----tttcttagaaaatatgat 43452395  T
Q  511 tactttctgtccacatttttaatttggtcta 541  Q
    || ||| ||| ||| ||||||||||||||||    
T  43452394 tattttttgttcacttttttaatttggtcta 43452364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 235 - 316
Target Start/End: Original strand, 11377186 - 11377267
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaa 316  Q
    ||||||||  |||||||||||||||||||| || ||||||||   |||||| ||||||||||||||| | || |||||||||    
T  11377186 atgtattcggatcacttttttactcaaccgtatagtttgattcagtttacgatttttattttaccaatcgaatcaaaccaaa 11377267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 235 - 316
Target Start/End: Complemental strand, 11696016 - 11695935
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaa 316  Q
    ||||||||  |||| |||||||||  ||| ||||||||| || | ||| ||||||| |||||||||||||||||||||||||    
T  11696016 atgtattcgtatcaattttttacttgaccacatggtttggttcggtttgcggttttgattttaccaaccaaaccaaaccaaa 11695935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 235 - 300
Target Start/End: Original strand, 15320124 - 15320189
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttacca 300  Q
    ||||||||| || | |||||||||||||| ||||||||| |||| ||| |||||||||||||||||    
T  15320124 atgtattcagataatttttttactcaaccacatggtttggtttggtttgcggtttttattttacca 15320189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 310 - 350
Target Start/End: Original strand, 21734223 - 21734263
Alignment:
Q  310 aaccaaatcaaaccgcaacataagaaaaaacactaattaaa 350  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  21734223 aaccaaatcaaaccgcaacaaaagaaaaaacactaattaaa 21734263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 257 - 312
Target Start/End: Original strand, 10242306 - 10242361
Alignment:
Q  257 ctcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaac 312  Q
    |||||||||||| |||| |||| | | |||||||||||||||||||||||||||||    
T  10242306 ctcaaccgcatgttttggtttggtctgcggtttttattttaccaaccaaaccaaac 10242361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 17763237 - 17763190
Alignment:
Q  250 ttttttactcaaccgcatggtttgatttgatttacggtttttatttta 297  Q
    |||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  17763237 ttttttactcaaccacatagtttggtttgatttacggtttttatttta 17763190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 411 - 473
Target Start/End: Original strand, 5862374 - 5862436
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgat 473  Q
    |||||||||||| |||| |||||||||||||||||| ||| | ||||||| ||| ||||||||    
T  5862374 tttcttctttgctttttctttcaaaaatgtatttatgtgctacttgaactattagagaatgat 5862436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 614 - 667
Target Start/End: Original strand, 11377567 - 11377621
Alignment:
Q  614 tgttgtgttttggctttt-taaacttgattttaatgttggaaacaaaaaattgta 667  Q
    ||||||||||| | |||| ||||||||| ||||||||||||||||||||||||||    
T  11377567 tgttgtgttttagtttttttaaacttgaatttaatgttggaaacaaaaaattgta 11377621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 698 - 752
Target Start/End: Original strand, 20985896 - 20985949
Alignment:
Q  698 tccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaa 752  Q
    ||||||||||| ||||||| ||||| ||||||| |||||||||||||||||||||    
T  20985896 tccaatccaaa-ccgcattagtttggtttggtttggattttattttaaaagtcaa 20985949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 707 - 753
Target Start/End: Original strand, 27301487 - 27301533
Alignment:
Q  707 aaaccgcattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    |||||||||||||||| ||||||||  ||||||||||||||||||||    
T  27301487 aaaccgcattggtttggtttggttcaaattttattttaaaagtcaac 27301533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 250 - 312
Target Start/End: Complemental strand, 29172221 - 29172159
Alignment:
Q  250 ttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaac 312  Q
    ||||||||||||||||||||||||||||| |||   ||||| |||||||||||  ||||||||    
T  29172221 ttttttactcaaccgcatggtttgatttggtttgaagttttgattttaccaactgaaccaaac 29172159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 619 - 673
Target Start/End: Complemental strand, 36964187 - 36964133
Alignment:
Q  619 tgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    |||||| ||||| | |||||||||||||||||||| ||||||| |||||||||||    
T  36964187 tgttttagctttgttaacttgattttaatgttggatacaaaaatttgtatcgtct 36964133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 612 - 666
Target Start/End: Complemental strand, 44085653 - 44085601
Alignment:
Q  612 tatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgt 666  Q
    |||||||||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  44085653 tatgttgtgtttcggctttttaa-cttgattttaatgttggaaa-aaaaaattgt 44085601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 552 - 673
Target Start/End: Original strand, 21480659 - 21480782
Alignment:
Q  552 tgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggcttttta--aacttgattttaatgt 649  Q
    |||||||||||||  |||||| ||||||||| |||||||||| | ||| |||| |  || |||| |||||||| ||||||||  || ||||||||||  |    
T  21480659 tgaaaatgaaattgaaatgtttgatgaaatttaaaacattgttgaaaacattgatgtaaatatggtgtgttttagctttttaataatttgattttaacat 21480758  T
Q  650 tggaaacaaaaaattgtatcgtct 673  Q
     | | |||||||||||||| ||||    
T  21480759 cgaagacaaaaaattgtattgtct 21480782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 687 - 753
Target Start/End: Original strand, 5862610 - 5862680
Alignment:
Q  687 gcaccaaccgatccaatccaaaaccgcattggtttgatttg-----gttcggattttattttaaaagtcaac 753  Q
    |||| ||||||| ||||||||| ||| ||||||||||||||     ||||||||||||||||||||||||||    
T  5862610 gcacaaaccgattcaatccaaa-ccgtattggtttgatttggtttggttcggattttattttaaaagtcaac 5862680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 687 - 753
Target Start/End: Original strand, 12041579 - 12041638
Alignment:
Q  687 gcaccaaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    |||||||||||||||| ||||  |||||||||||||     ||||||||||||||||||||||||||    
T  12041579 gcaccaaccgatccaacccaa--ccgcattggtttg-----gttcggattttattttaaaagtcaac 12041638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 338
Target Start/End: Complemental strand, 36965634 - 36965537
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    |||||||||||| | ||||||||||||||||||   ||| |||||||| | |||||||||||||| |  |||||||||      ||||||||||||||||    
T  36965634 atgtattcaaataatttttttactcaaccgcattagttggtttgatttgc-gtttttattttacctattaaaccaaac-----aaaaccgcaacataaga 36965541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 688 - 753
Target Start/End: Complemental strand, 11678092 - 11678030
Alignment:
Q  688 caccaaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    |||||||||||||||| |||| ||||| | |||   ||||||||||||||||||||||||||||||    
T  11678092 caccaaccgatccaattcaaa-ccgcaatagttg--tttggttcggattttattttaaaagtcaac 11678030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 688 - 753
Target Start/End: Complemental strand, 11695570 - 11695508
Alignment:
Q  688 caccaaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    |||||||||||||||| |||| ||||| | |||   ||||||||||||||||||||||||||||||    
T  11695570 caccaaccgatccaattcaaa-ccgcaatagttg--tttggttcggattttattttaaaagtcaac 11695508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 186
Target Start/End: Complemental strand, 11696105 - 11696071
Alignment:
Q  152 gggtgtttaaaatcgaaccaatccaatagaaaaac 186  Q
    ||||||| |||||||||||||||||||||||||||    
T  11696105 gggtgttcaaaatcgaaccaatccaatagaaaaac 11696071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 687 - 753
Target Start/End: Original strand, 30761740 - 30761805
Alignment:
Q  687 gcaccaaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    ||| ||||||||| || ||||| | ||||||||||| ||||||| | ||||||||||||||||||||    
T  30761740 gcatcaaccgatctaacccaaatc-gcattggtttggtttggtttgaattttattttaaaagtcaac 30761805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 686 - 752
Target Start/End: Original strand, 36500620 - 36500685
Alignment:
Q  686 tgcaccaaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaa 752  Q
    ||||||||||||||||| ||||| ||||| ||||||| || |||||  ||| |||||||||||||||    
T  36500620 tgcaccaaccgatccaacccaaa-ccgcaatggtttggttcggttcatattgtattttaaaagtcaa 36500685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 597 - 662
Target Start/End: Complemental strand, 11678178 - 11678114
Alignment:
Q  597 aaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaa 662  Q
    |||||||| | ||| |||||| | |||| |||||||||  ||||||||||||||||||||||||||    
T  11678178 aaatattgttgaaaatatgttcttttttagctttttaat-ttgattttaatgttggaaacaaaaaa 11678114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 597 - 662
Target Start/End: Complemental strand, 11695656 - 11695592
Alignment:
Q  597 aaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaa 662  Q
    |||||||| | ||| |||||| | |||| |||||||||  ||||||||||||||||||||||||||    
T  11695656 aaatattgttgaaaatatgttcttttttagctttttaat-ttgattttaatgttggaaacaaaaaa 11695592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 593
Target Start/End: Original strand, 15320464 - 15320505
Alignment:
Q  552 tgaaaatgaaattttaatgttggatgaaattaaaaacattgt 593  Q
    ||||||||||||| ||||||||||||||||| ||||| ||||    
T  15320464 tgaaaatgaaattgtaatgttggatgaaatttaaaacgttgt 15320505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 18360408 - 18360351
Alignment:
Q  151 agggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatcgaaac 208  Q
    ||||||||||||| |||||||| ||||||||||||| | ||||| || ||||| ||||    
T  18360408 agggtgtttaaaaccgaaccaacccaatagaaaaaccgcaaactaaaccaatccaaac 18360351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 43452664 - 43452592
Alignment:
Q  236 tgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaacca 309  Q
    |||||| | |||| ||||||||||||||| || ||| |||||| ||| ||||||||||||||| || |||||||    
T  43452664 tgtatttatatcatttttttactcaaccgtatagtt-gatttggtttgcggtttttattttacaaatcaaacca 43452592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 44741653 - 44741730
Alignment:
Q  254 ttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacata 331  Q
    |||||||||||| | ||||| |||||||| | ||| |||||||| ||||| ||  |||||||| ||||| ||||||||    
T  44741653 ttactcaaccgcgtagtttggtttgatttgcagttgttattttaacaaccgaattaaaccaaaccaaactgcaacata 44741730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 1e-43; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 411 - 753
Target Start/End: Original strand, 2832101 - 2832443
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    |||||||||||  ||||||||||||||| ||||||| ||| | ||||||||||  |||||||| |||| ||  ||||||  |||| |||   ||| ||||    
T  2832101 tttcttctttggtttttatttcaaaaatatatttatgtgctacttgaacttttcgagaatgataaaatattgatcttttatatttattatgtaattgaat 2832200  T
Q  511 tactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaa 610  Q
    |||||| ||||||  ||||||||||||| |||||||||| |||||||||||||| ||||||   ||||||||||||||||||| ||||| |||  |  ||    
T  2832201 tactttgtgtccaagtttttaatttggtttatgttgtttggtgaaaatgaaattctaatgtgaaatgaaattaaaaacattgttggaaacattaatggaa 2832300  T
Q  611 ttatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtctggtnnnnnnnnntgcaccaaccgatccaatccaaaac 710  Q
     || ||||||||||  | ||||||||| ||||||||||||| ||||| |||||||||| |||   |          |||||||||||| ||| || ||||    
T  2832301 atacgttgtgtttt-accttttaaactcgattttaatgttgaaaacataaaattgtattgtc---tcaaaaaacccgcaccaaccgat-caaacccaaac 2832395  T
Q  711 cgcattggtttgatttgg-----ttcggattttattttaaaagtcaac 753  Q
    ||||||||||||||||||     |||||||||||||||||||||||||    
T  2832396 cgcattggtttgatttggtttgattcggattttattttaaaagtcaac 2832443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 153 - 316
Target Start/End: Complemental strand, 52632765 - 52632604
Alignment:
Q  153 ggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatcgaaactgcaaaaagctgtatttggtttcgatatgtattcaaatcacttt 252  Q
    |||||| |||| |||||||| ||||||||||||  |||||||||| ||| |||||  ||||||| ||| ||||||||| |||  ||||||| ||||||||    
T  52632765 ggtgttcaaaaccgaaccaacccaatagaaaaatcgtaaactgaaccaaccgaaatcgcaaaaaactgcatttggtttggat--gtattcatatcacttt 52632668  T
Q  253 tttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaa 316  Q
    |||||||||| |||||||||| |||| ||| |||||||||||||||||||||||||||||||||    
T  52632667 tttactcaactgcatggtttggtttggtttgcggtttttattttaccaaccaaaccaaaccaaa 52632604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 245 - 544
Target Start/End: Original strand, 42362753 - 42363066
Alignment:
Q  245 atcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacacta 344  Q
    |||| |||||||||||||||||||||||| |||| ||| ||||||| |||||||||||  || ||||||||| ||||||||||||||||| |||  | |     
T  42362753 atcatttttttactcaaccgcatggtttggtttggtttgcggttttcattttaccaactgaatcaaaccaaaccaaaccgcaacataagacaaat-attt 42362851  T
Q  345 attaaa--tatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaa-tgacatatattttctt------------ctttgccttttat 429  Q
    ||||||  ||| ||| ||   ||||||||| || |||| ||||| ||||||| ||||| |||||| | || ||||            |||| | ||||||    
T  42362852 attaaacatatttcacctagaccaatactcttataaactcaatggaaacttttataaaatgacattttttctcttgtttagttccttctttactttttat 42362951  T
Q  430 ttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttt 529  Q
    |||||||| |||||||| |||   ||| ||||||| |||||||| |||||||||| |||| ||||||||||||||||  |||||||| ||||||| ||||    
T  42362952 ttcaaaaacgtatttatgtgctgcttgtacttttagagaatgataaaatcttagtattttgcatttcttacaaaatatgattactttttgtccacgtttt 42363051  T
Q  530 taatttggtctatgt 544  Q
    ||| |||||||||||    
T  42363052 taacttggtctatgt 42363066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 305 - 582
Target Start/End: Complemental strand, 38681704 - 38681418
Alignment:
Q  305 aaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaat--atgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcataaa-t 401  Q
    ||||||| ||| |||||||||||||||||||||| ||||||||||||  ||| |||||   | ||||||||||||||  ||||||||||||| ||||| |    
T  38681704 aaccaaagcaagtcaaaccgcaacataagaaaaa-cactaattaaatctatgccatctagactaatactcgtaaaaattcaatgaaaacttttataaaat 38681606  T
Q  402 gacatatattttcttct-ttgccttttattt-------caaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccat 493  Q
    |||||| ||||||   | ||   ||||||||       ||||||||||| ||||||| | ||||||||||| | ||||||  ||||||||| ||||  ||    
T  38681605 gacata-attttcacttgttaagttttatttttcttttcaaaaatgtatatatatgctacttgaacttttagaaaatgatataatcttagtattttatat 38681507  T
Q  494 ttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaatt 582  Q
    |||||||| |||| || ||||||  |||||||  |||||||||||||||||||||| ||||||||||||||  |||||| |||||||||    
T  38681506 ttcttacataatacaactacttttggtccacacatttaatttggtctatgttgtttggtgaaaatgaaattgcaatgttagatgaaatt 38681418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 411 - 569
Target Start/End: Complemental strand, 20846841 - 20846683
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    ||||||||||   |||||||| ||||||||| |||| |    |||||||||||| |||||||| |||||||| ||||||  |||||||||| |||| |||    
T  20846841 tttcttctttattttttatttaaaaaatgtaattatgtattgtttgaacttttagagaatgataaaatcttaatcttttatatttcttacataatataat 20846742  T
Q  511 tactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaat 569  Q
    |||||| ||||||| ||||||||||||| |||||||||| |||||||||||||| ||||    
T  20846741 tactttgtgtccacgtttttaatttggtttatgttgtttggtgaaaatgaaattataat 20846683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 415 - 668
Target Start/End: Original strand, 17144452 - 17144693
Alignment:
Q  415 ttctttgccttttatttcaaaa-atgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattac 513  Q
    |||||||| |||||||| |||| |||||||||||||| ||||||||||||||| | | || ||||||||||||||| ||||||||| |||||||| ||      
T  17144452 ttctttgctttttatttaaaaaaatgtatttatatgctatttgaacttttaaatatttataaaatcttagtcttttgcatttcttataaaatagatttca 17144551  T
Q  514 tttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaatta 613  Q
    ||| ||||||| ||||| ||||| ||||||| |||    ||||          | ||||| |||||||| |||||||||| ||||| || ||| ||| ||    
T  17144552 tttttgtccacgtttttcatttgctctatgtagtt---ggaaa---------cattgttgaatgaaatttaaaacattgttggaaacatggctgaaaata 17144639  T
Q  614 tgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtat 668  Q
    ||||||||||| | ||||| ||||||||||| |||||| ||| ||||||||||||    
T  17144640 tgttgtgttttag-ttttttaacttgattttgatgttgaaaagaaaaaattgtat 17144693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 411 - 548
Target Start/End: Complemental strand, 44662303 - 44662163
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaa---tag 507  Q
    ||||||||| |  ||||||||||||||| ||||||||||  | |||||||||||||||||||| ||||||||||||||  ||||| ||||||||   |||    
T  44662303 tttcttcttagttttttatttcaaaaatatatttatatgttacttgaacttttaaagaatgataaaatcttagtctttggcatttattacaaaatagtag 44662204  T
Q  508 aattactttctgtccacatttttaatttggtctatgttgtt 548  Q
     |||||||| |||||   |||||||||||||||||||||||    
T  44662203 tattactttttgtccttgtttttaatttggtctatgttgtt 44662163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 235 - 357
Target Start/End: Original strand, 51661896 - 51662017
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||||||  |||||||||||| |||||||||||||||| |||| ||| |||||||| ||||||||||| |||||| ||||| |||||||||||||||      
T  51661896 atgtattcggatcacttttttattcaaccgcatggtttggtttggtttgcggtttttgttttaccaaccgaaccaacccaaaccaaaccgcaacataa-t 51661994  T
Q  335 aaaaacactaattaaatatgtca 357  Q
    ||||| |||||||||| ||||||    
T  51661995 aaaaagactaattaaacatgtca 51662017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 200 - 338
Target Start/End: Original strand, 10481105 - 10481246
Alignment:
Q  200 aatcgaaactgcaaaaagctgtatttggtttcgatatgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttatttta-- 297  Q
    |||||||||||||||||    |||||||||| |||  |||||   |||||||| ||||||||||| ||||||||||||||||| ||||||||||||||      
T  10481105 aatcgaaactgcaaaaaatcatatttggtttggat--gtatttggatcactttattactcaaccgtatggtttgatttgatttgcggtttttattttatc 10481202  T
Q  298 ---ccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaa 338  Q
       | ||||||||||||||||| |||||||||||||||||||||    
T  10481203 aaccgaaccaaaccaaaccaaaccaaaccgcaacataagaaaaa 10481246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 454 - 592
Target Start/End: Complemental strand, 52632349 - 52632211
Alignment:
Q  454 ttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtttagtg 553  Q
    ||||| ||||| |||||||| |||||||||| |||| ||||||||||| || |  |||| ||| ||||||| ||||||||||||| ||||| |||| |||    
T  52632349 ttgaagttttagagaatgataaaatcttagtattttacatttcttacataacattattaatttttgtccacgtttttaatttggtttatgtagtttggtg 52632250  T
Q  554 aaaatgaaattttaatgttggatgaaattaaaaacattg 592  Q
    ||||||||| | |||| | | ||||||||||||||||||    
T  52632249 aaaatgaaaatgtaatttggaatgaaattaaaaacattg 52632211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 412 - 544
Target Start/End: Complemental strand, 21562918 - 21562788
Alignment:
Q  412 ttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaatt 511  Q
    |||||||| || ||||||||||||||||||||||| | | | ||||||||  |||||||||| |||||||| || ||| ||||||| | ||||||  |||    
T  21562918 ttcttcttcgctttttatttcaaaaatgtatttatgtactacttgaactt--aaagaatgataaaatcttattcatttgcatttctaataaaatatgatt 21562821  T
Q  512 actttctgtccacatttttaatttggtctatgt 544  Q
    ||||| ||||||||||||| |||||||||||||    
T  21562820 actttttgtccacattttttatttggtctatgt 21562788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 235 - 351
Target Start/End: Original strand, 10744586 - 10744700
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    |||| ||||||||| ||||||||||||| | ||||||||||||||||| |||||||||| |||||||   ||||||| |||| ||||||||||||||||     
T  10744586 atgtgttcaaatcatttttttactcaactgtatggtttgatttgatttgcggtttttatattaccaattgaaccaaa-caaaccaaaccgcaacataag- 10744683  T
Q  335 aaaaacactaattaaat 351  Q
    | |||||||||||||||    
T  10744684 ataaacactaattaaat 10744700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 418 - 672
Target Start/End: Complemental strand, 37045669 - 37045420
Alignment:
Q  418 tttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttc 517  Q
    ||||| |||||||| |||||||||||||| ||| | || |||||||| |||||||  | |||| |||||||| ||||||||||||||||  ||||||||     
T  37045669 tttgctttttattt-aaaaatgtatttatgtgctactt-aacttttagagaatgagaacatctcagtcttttgcatttcttacaaaataagattactttt 37045572  T
Q  518 tgtccacatttttaatttggtctatgttgtt----------tagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgcta 607  Q
    ||||| | ||||||||||||| |||||||||          || ||||||||||||| ||||||| ||||||||| ||||||||||            |     
T  37045571 tgtccgcgtttttaatttggtttatgttgttggaaacattgtaatgaaaatgaaattgtaatgtttgatgaaatttaaaacattgt------------tg 37045484  T
Q  608 aaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtc 672  Q
    ||| ||| ||||||||  ||||||| | |||||||||||||||||||||||||||| ||||||||    
T  37045483 aaaatatattgtgtttcagcttttt-atcttgattttaatgttggaaacaaaaaatcgtatcgtc 37045420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 411 - 545
Target Start/End: Original strand, 36330391 - 36330525
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    ||||||| |||  |||||||| ||| || ||||||  ||| | ||||| ||||| ||||||||  |||||||||||||| ||||||||||| ||||||||    
T  36330391 tttcttccttgttttttattttaaagatatatttacgtgctacttgaatttttagagaatgatacaatcttagtctttttcatttcttacataatagaat 36330490  T
Q  511 tactttctgtccacatttttaatttggtctatgtt 545  Q
    |||||| ||||||  ||||||||||| ||||||||    
T  36330491 tactttttgtccatgtttttaatttgttctatgtt 36330525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 257 - 339
Target Start/End: Original strand, 38651586 - 38651668
Alignment:
Q  257 ctcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaa 339  Q
    |||||||||||||||||||||| ||| ||||||| |||||||||||  |||||||||||| ||||||||||||||| ||||||    
T  38651586 ctcaaccgcatggtttgatttggtttgcggttttcattttaccaactgaaccaaaccaaaccaaaccgcaacataaaaaaaaa 38651668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 235 - 353
Target Start/End: Original strand, 46252969 - 46253086
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||||||| |||| ||||||| ||||||| |||||||| || | ||| ||||||| ||||||| |||| || ||||||||| |||||||||| ||||||    
T  46252969 atgtattcagatcaattttttattcaaccgtatggtttggttcggtttgcggttttaattttactaaccgaagcaaaccaaaccaaaccgcaatataaga 46253068  T
Q  335 aaaaacactaattaaatat 353  Q
    ||| |||||||||||||||    
T  46253069 aaa-acactaattaaatat 46253086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 687 - 753
Target Start/End: Original strand, 55467626 - 55467691
Alignment:
Q  687 gcaccaaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  55467626 gcaccaactgatccaatccaaa-ccgcattggtttgatttggttcggattttattttaaaagtcaac 55467691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 235 - 338
Target Start/End: Complemental strand, 4280850 - 4280748
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||||||| |||| |||||||||||||||||||||||| || | ||| |||||||||||||||||||| ||| ||  ||| |||||||||| |||||||    
T  4280850 atgtattcagatca-ttttttactcaaccgcatggtttggttcggtttgcggtttttattttaccaaccgaacaaagtcaagtcaaaccgcagcataaga 4280752  T
Q  335 aaaa 338  Q
    ||||    
T  4280751 aaaa 4280748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 235 - 338
Target Start/End: Original strand, 5640249 - 5640352
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||| |||||||| ||| |||||||||||||||||||  |||| |||  | |||| |||||||||||||||||| |||||| ||||| |||||||||||    
T  5640249 atgtaatcaaatcattttcttactcaaccgcatggtttagtttggtttgtgattttcattttaccaaccaaaccataccaaaccaaactgcaacataaga 5640348  T
Q  335 aaaa 338  Q
    ||||    
T  5640349 aaaa 5640352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 250 - 352
Target Start/End: Original strand, 2565840 - 2565941
Alignment:
Q  250 ttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaa 349  Q
    ||||||||||||| | |||||||| || | ||| ||||||| ||||||||||||||| ||||||||| |||||||||| ||||| |||||| ||||||||    
T  2565840 ttttttactcaactggatggtttggttcggtttgcggttttgattttaccaaccaaaacaaaccaaaccaaaccgcaatataag-aaaaactctaattaa 2565938  T
Q  350 ata 352  Q
    |||    
T  2565939 ata 2565941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 411 - 525
Target Start/End: Original strand, 22472780 - 22472894
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    |||||| |||| |||||||||||||||||||||||| | | | ||||||||||| | |||||| |||||||||| |||| ||||||||||| ||||  ||    
T  22472780 tttcttatttgtcttttatttcaaaaatgtatttatgttctacttgaacttttagaaaatgataaaatcttagtattttgcatttcttacataatatgat 22472879  T
Q  511 tactttctgtccaca 525  Q
    |||||| || |||||    
T  22472880 tactttttgcccaca 22472894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 414 - 548
Target Start/End: Complemental strand, 44651326 - 44651193
Alignment:
Q  414 cttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattac 513  Q
    ||||||||  |||||||| ||||| |||||||| ||| | ||||| ||||| |||||||  ||||||||||||||| ||||||||||||||||  |||||    
T  44651326 cttctttgttttttatttaaaaaacgtatttatgtgctacttgaaattttagagaatgaaaaaatcttagtcttttgcatttcttacaaaataagattac 44651227  T
Q  514 tttctgtccacatttttaatttggtctatgttgtt 548  Q
     || |||||| |||||| | ||||| |||||||||    
T  44651226 gttttgtccatattttt-acttggtatatgttgtt 44651193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 475 - 604
Target Start/End: Complemental strand, 5695844 - 5695715
Alignment:
Q  475 aaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttgg 574  Q
    ||||||| ||||||| ||||||||| | || || |||| ||| |||||||||||| ||||| |||||| |||||| |||||||| ||||| || |||| |    
T  5695844 aaatcttggtcttttacatttcttatataaaaggattattttttgtccacattttaaattttgtctatattgttttgtgaaaataaaattgtactgttag 5695745  T
Q  575 atgaaattaaaaacattgtcggaaatattg 604  Q
    |||  ||| |||||||||||||||| ||||    
T  5695744 atgctatttaaaacattgtcggaaaaattg 5695715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 152 - 416
Target Start/End: Original strand, 55467074 - 55467349
Alignment:
Q  152 gggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatc------gaaactgcaaaaagctgtatttggtttcgatatgtattcaaa 245  Q
    ||||||| |||| |||||||||||||||||||||| | | || ||| |||||      ||||| ||||||| | | ||||||||| |||  ||||||| |    
T  55467074 gggtgttcaaaaccgaaccaatccaatagaaaaaccgcagaccgaaccaatccaaattgaaaccgcaaaaaaccgcatttggtttggat--gtattcaga 55467171  T
Q  246 tcacttttttactcaaccgcatggtttgatttgatttacggtttttatttta-----ccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaac 340  Q
    ||| ||||||||||||||| |||||||| || | ||| | ||||| ||||||     | ||||||||||||||||| |||||| ||| ||||| ||||||    
T  55467172 tcaattttttactcaaccgtatggtttggttcggtttgcagttttgattttactaaccgaaccaaaccaaaccaaaccaaacctcaatataag-aaaaac 55467270  T
Q  341 actaattaa--atatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcat-aaatgacatatattttctt 416  Q
    ||||| |||  |||| |||  ||  ||||||||| || |||| ||||||||||||| || ||||||||| | |||||||    
T  55467271 actaactaaatatatatcacttgaaccaatactcatagaaactcaatgaaaactttaataaaatgacatgttttttctt 55467349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 153 - 415
Target Start/End: Complemental strand, 26758868 - 26758606
Alignment:
Q  153 ggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaat------cgaaactgcaaaaagctgtatttggtttcgatatgtattcaaat 246  Q
    ||||||||||| ||||||||||||||||||||||  ||||  ||| ||||      ||||| ||||| ||   | ||||||||| ||   ||||||| ||    
T  26758868 ggtgtttaaaaccgaaccaatccaatagaaaaaccataaatcgaaccaatttaaatcgaaattgcaacaaatcgcatttggtttgga---gtattcagat 26758772  T
Q  247 cacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaat 346  Q
    || ||| ||||||||||||||| |||| || | ||| ||||||| |||||||||||||||||||||     |||||||||| ||||| ||||||||||||    
T  26758771 caatttgttactcaaccgcatgatttggttcggtttgcggttttgattttaccaaccaaaccaaac-----caaaccgcaatataag-aaaaacactaat 26758678  T
Q  347 taa--atatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcat-aaatgacatatattttct 415  Q
     ||  |||| |||  ||  ||||||| | || |||| ||||||||||||| || ||||||||||| ||||||    
T  26758677 aaaatatatatcacttgaaccaatacccatagaaactcaatgaaaactttaatcaaatgacatattttttct 26758606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 431 - 548
Target Start/End: Original strand, 22256034 - 22256151
Alignment:
Q  431 tcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaa-tcttagtcttttccatttcttacaaaatagaattactttctgtccacatttt 529  Q
    |||||||||||||||||||| | ||||||| ||| |||||||| ||| | ||||||||||  ||||||||||| |||||||| |||| || ||||  |||    
T  22256034 tcaaaaatgtatttatatgctacttgaactcttagagaatgattaaatttttagtcttttgtatttcttacaagatagaatttctttttgcccac-gttt 22256132  T
Q  530 taatttggtctatgttgtt 548  Q
    |||||||||||| ||||||    
T  22256133 taatttggtctacgttgtt 22256151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 423 - 544
Target Start/End: Complemental strand, 4669086 - 4668965
Alignment:
Q  423 cttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtcc 522  Q
    |||||||||||||||||||||||| ||| | ||||||||||| |||||||| |||| ||||| |||| ||||||| ||  ||||  |||||||| || ||    
T  4669086 cttttatttcaaaaatgtatttatgtgctacttgaacttttagagaatgataaaatattagtattttacatttctaacgtaataagattactttttgccc 4668987  T
Q  523 acatttttaatttggtctatgt 544  Q
    || |||| || ||||| |||||    
T  4668986 acgttttaaaattggtttatgt 4668965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 612 - 673
Target Start/End: Original strand, 8557866 - 8557926
Alignment:
Q  612 tatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8557866 tatgttgtgtttaagctttttaa-cttgattttaatgttggaaacaaaaaattgtatcgtct 8557926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 237 - 338
Target Start/End: Original strand, 25918779 - 25918880
Alignment:
Q  237 gtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaa 336  Q
    ||||||| |||| ||||||||||||| |||||||||  || | ||| ||||||| |||||||||||  |||||||||||| |||| ||||| ||||||||    
T  25918779 gtattcagatcatttttttactcaactgcatggttttgttcggtttgcggttttgattttaccaactgaaccaaaccaaaccaaaacgcaatataagaaa 25918878  T
Q  337 aa 338  Q
    ||    
T  25918879 aa 25918880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 152 - 312
Target Start/End: Original strand, 17144180 - 17144344
Alignment:
Q  152 gggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatc------gaaactgcaaaaagctgtatttggtttcgatatgtattcaaa 245  Q
    ||||||| |||| ||||||||| |||||||||||| |||||||||| ||| |      ||||| ||||||| | | ||||| ||  |||  ||||||  |    
T  17144180 gggtgttcaaaaccgaaccaattcaatagaaaaaccgtaaactgaaccaacccaaaccgaaaccgcaaaaaaccgcatttgattcggat--gtattcgga 17144277  T
Q  246 tcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaac 312  Q
    || |||||||||||||||  |||||||| |||| ||| |||||||||||||| ||||||||||||||    
T  17144278 tcccttttttactcaaccatatggtttggtttggtttgcggtttttattttatcaaccaaaccaaac 17144344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 152 - 313
Target Start/End: Complemental strand, 44651589 - 44651433
Alignment:
Q  152 gggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatcgaaactgcaaaaagctgtatttggtttcgatatgtattcaaatcactt 251  Q
    ||||||| ||||||||||||||||||||||||||  ||||| |||| ||| | ||||   ||||| | | |||| |||| |||  ||| ||  |||| ||    
T  44651589 gggtgttcaaaatcgaaccaatccaatagaaaaatcgtaaattgaaccaacccaaac---aaaaaaccgcattttgtttggat--gtaatcggatcattt 44651495  T
Q  252 ttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacc 313  Q
    | || ||||||||||||||||| ||||||||  |||||| |||||||||||| |||||||||    
T  44651494 tcttgctcaaccgcatggtttggtttgatttgtggttttcattttaccaaccgaaccaaacc 44651433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 250 - 350
Target Start/End: Complemental strand, 51194790 - 51194691
Alignment:
Q  250 ttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaa 349  Q
    ||||||||||||  | |||||||| |||  |||||||||||||||||| ||||| ||||||||| ||  ||||||||||||||| | |||||||||||||    
T  51194790 ttttttactcaattgtatggtttggtttagtttacggtttttattttagcaaccgaaccaaaccgaactaaaccgcaacataag-agaaacactaattaa 51194692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 409 - 548
Target Start/End: Original strand, 5640441 - 5640580
Alignment:
Q  409 attttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaataga 508  Q
    ||||| |||||||  |||||||| |  || |||||||  ||| | ||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||     
T  5640441 atttttttctttggtttttatttaattaacgtatttacgtgctacttgaaattttagagaatgataaaatcttagtcttttgcatttcttacaaaatagg 5640540  T
Q  509 attactttctgtccacatttttaatttggtctatgttgtt 548  Q
    ||||| || ||||||  || |||| ||||| ||| |||||    
T  5640541 attacattttgtccatgttattaacttggtatatattgtt 5640580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 411 - 538
Target Start/End: Complemental strand, 27054445 - 27054319
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    |||||||||||  |||| | |||||||||||||||| ||| | ||||||| |||  ||||||| |||| ||| ||||||  |||||||||||||||  ||    
T  27054445 tttcttctttgttttttctatcaaaaatgtatttatgtgctacttgaactcttagtgaatgattaaattttactcttttgtatttcttacaaaatatgat 27054346  T
Q  511 tactttctgtccacatttttaatttggt 538  Q
    |||||| |||||| | ||||||||||||    
T  27054345 tactttttgtccata-ttttaatttggt 27054319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 338
Target Start/End: Original strand, 50578434 - 50578624
Alignment:
Q  151 agggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatc------gaaactgcaaaaagctgtatttggtttcgatatgtattcaa 244  Q
    |||||||||||||  ||| ||||||||||||||||  | |||||||| |||||      ||||||||||||| | | ||||||||| |||  ||| ||      
T  50578434 agggtgtttaaaacagaatcaatccaatagaaaaatcgcaaactgaaccaatccaaaccgaaactgcaaaaacc-gcatttggtttggat--gtaatcgg 50578530  T
Q  245 atcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaa 338  Q
    |||| ||| || |||||||| ||| |||| |||| ||| ||||||| ||||||||||   |||| ||||||| |||||||||||||||||||||    
T  50578531 atcattttcttgctcaaccgtatgatttggtttggtttgcggttttcattttaccaattgaaccgaaccaaaccaaaccgcaacataagaaaaa 50578624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 411 - 548
Target Start/End: Original strand, 10481333 - 10481473
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttag---tcttttccatttcttacaaaatag 507  Q
    ||||||||| |  ||||||||||||||||||||||| ||| | || |||||||| | |||||| |||||||||   | |||  ||||||||||  |||||    
T  10481333 tttcttcttagatttttatttcaaaaatgtatttatgtgctactttaacttttagaaaatgataaaatcttagtaatatttaacatttcttacggaatag 10481432  T
Q  508 aattactttctgtccacatttttaatttggtctatgttgtt 548  Q
     || ||||| || |||| ||||||||||||| |||||||||    
T  10481433 gataactttatgcccacctttttaatttggtttatgttgtt 10481473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 235 - 353
Target Start/End: Original strand, 22255822 - 22255938
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    |||||||  ||||| |||||||||||| ||||| ||||| || | ||| ||||||| |||||| |||||  ||||||||||| |||||||| | |||||     
T  22255822 atgtatttgaatcatttttttactcaatcgcatagtttggttcggtttgcggttttgattttatcaacc-gaccaaaccaaaccaaaccgcgatataag- 22255919  T
Q  335 aaaaacactaattaaatat 353  Q
    |||||||||||||||||||    
T  22255920 aaaaacactaattaaatat 22255938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 45629720 - 45629662
Alignment:
Q  251 tttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaacca 309  Q
    ||||||||||||||||||||||| || ||||| | ||||||||||||||||||||||||    
T  45629720 tttttactcaaccgcatggtttggttcgatttgcagtttttattttaccaaccaaacca 45629662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 238 - 316
Target Start/End: Complemental strand, 48169223 - 48169145
Alignment:
Q  238 tattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaa 316  Q
    |||||| |||| ||||||||| |||| ||||||||| || | ||| ||||||| |||||||||||||||||||||||||    
T  48169223 tattcagatcaattttttacttaaccacatggtttggttcggtttgcggttttcattttaccaaccaaaccaaaccaaa 48169145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 235 - 337
Target Start/End: Complemental strand, 55130264 - 55130162
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    |||||||  ||||| ||||||||||||||| || |||||||| ||||| |||||||||| ||| ||||| ||||||  ||||  |||||||||||||| |    
T  55130264 atgtatttgaatcatttttttactcaaccgtatagtttgattcgatttgcggtttttatcttaacaaccgaaccaattcaaactaaaccgcaacataaaa 55130165  T
Q  335 aaa 337  Q
    |||    
T  55130164 aaa 55130162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 415 - 544
Target Start/End: Complemental strand, 4280650 - 4280521
Alignment:
Q  415 ttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattact 514  Q
    |||||||  |||||||||||||||||| |||  ||  | ||| ||||||| | |||||| |||||||||||| || ||||| ||||||||||  |||| |    
T  4280650 ttctttgttttttatttcaaaaatgtacttacgtgttacttgcacttttagaaaatgataaaatcttagtctgttgcatttattacaaaatatgattatt 4280551  T
Q  515 ttctgtccacatttttaatttggtctatgt 544  Q
    || ||||||  |||| ||||||||||||||    
T  4280550 ttttgtccatgttttaaatttggtctatgt 4280521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 4555156 - 4555075
Alignment:
Q  257 ctcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaa 338  Q
    ||||||||||  ||||  |||||||| ||||||| |||||||||  | ||||||||| ||||||||||||||||||||||||    
T  4555156 ctcaaccgcactgtttagtttgatttgcggttttcattttaccagtcgaaccaaaccgaatcaaaccgcaacataagaaaaa 4555075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 454 - 523
Target Start/End: Original strand, 50578757 - 50578826
Alignment:
Q  454 ttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtcca 523  Q
    ||||| ||||| |||||||| ||||||||||||||| ||||||||||||||||| ||||| || ||||||    
T  50578757 ttgaaattttagagaatgataaaatcttagtcttttgcatttcttacaaaataggattacgttttgtcca 50578826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 273 - 337
Target Start/End: Complemental strand, 44662438 - 44662375
Alignment:
Q  273 gatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaa 337  Q
    |||||||||| | |||||||||||| |||||||||||||||||| |||||| |||||||||||||    
T  44662438 gatttgatttgcagtttttattttatcaaccaaaccaaaccaaa-caaaccacaacataagaaaa 44662375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 219 - 338
Target Start/End: Original strand, 51660516 - 51660628
Alignment:
Q  219 tgtatttggtttcgatatgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatc 318  Q
    |||||||||||| |||  ||||||  |||| |||||||||  ||| ||||||||| ||||     |||||||||||||||||||  || ||||||||| |    
T  51660516 tgtatttggtttagat--gtattctgatcatttttttactataccacatggtttggtttg-----cggtttttattttaccaactgaatcaaaccaaacc 51660608  T
Q  319 aaaccgcaacataagaaaaa 338  Q
    ||||||||||||||||||||    
T  51660609 aaaccgcaacataagaaaaa 51660628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 210 - 349
Target Start/End: Original strand, 22472559 - 22472701
Alignment:
Q  210 gcaaaaagctgtatttggtttcgatatgtattcaaatcacttttttactcaaccg-catggtttgatttgatttacggtttttattttacc-----aacc 303  Q
    ||||||| |||||||||||||   ||||||||||||| | ||| ||||||||||| |||| |||| || || || |  ||||||||| |||     ||||    
T  22472559 gcaaaaaactgtatttggtttt--tatgtattcaaataattttcttactcaaccgccatgctttggttcgacttgcaatttttatttcaccaacggaacc 22472656  T
Q  304 aaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaa 349  Q
    |||||||||||||  ||||||||||||||| |||||||||||||||    
T  22472657 aaaccaaaccaaactaaaccgcaacataag-aaaaacactaattaa 22472701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 415 - 540
Target Start/End: Original strand, 25918972 - 25919097
Alignment:
Q  415 ttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgat-gaaatcttagtcttttccatttcttacaaaatagaattac 513  Q
    |||||||  |||| |||||||||||||||||| ||| | ||||||| ||| ||||||||  |||| ||||||||||  |||| ||||||| |   |||||    
T  25918972 ttctttgttttttgtttcaaaaatgtatttatgtgctacttgaactcttagagaatgataaaaattttagtcttttgtatttattacaaagtttgattac 25919071  T
Q  514 tttctgtccacatttttaatttggtct 540  Q
    ||| |||||||| ||||||||||||||    
T  25919072 tttttgtccaca-ttttaatttggtct 25919097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 707 - 753
Target Start/End: Complemental strand, 45629272 - 45629226
Alignment:
Q  707 aaaccgcattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||    
T  45629272 aaaccgtattggtttgatttggttcggagtttattttaaaagtcaac 45629226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 687 - 753
Target Start/End: Complemental strand, 20846574 - 20846505
Alignment:
Q  687 gcaccaaccgatccaatccaaaaccgcattggtttgatttggttcg----gattttattttaaaagtcaac 753  Q
    |||||||||||||||| ||||| ||||||||||||||||||||| |    |||||||||||||||||||||    
T  20846574 gcaccaaccgatccaacccaaa-ccgcattggtttgatttggttggtttggattttattttaaaagtcaac 20846505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 612 - 673
Target Start/End: Complemental strand, 25465971 - 25465911
Alignment:
Q  612 tatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    ||||||||||||| || |||||| |||||||||||||||| |||||||||||||||| ||||    
T  25465971 tatgttgtgttttagccttttaa-cttgattttaatgttgaaaacaaaaaattgtattgtct 25465911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 235 - 308
Target Start/End: Original strand, 45914740 - 45914813
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaacc 308  Q
    ||||||||  |||| | |||||||||||||||||||||| |||| ||| ||||||| ||||||| |||||||||    
T  45914740 atgtattcggatcaatattttactcaaccgcatggtttggtttggtttgcggttttgattttactaaccaaacc 45914813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 250 - 353
Target Start/End: Complemental strand, 8355872 - 8355771
Alignment:
Q  250 ttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaa 349  Q
    |||||||||||||| ||||||||  || | ||| | ||||| |||||| ||||| || ||||||||| |||||||||| |||||   |||||||||||||    
T  8355872 ttttttactcaaccacatggtttagttcggtttgcagttttgattttatcaaccgaatcaaaccaaaccaaaccgcaatataag--taaacactaattaa 8355775  T
Q  350 atat 353  Q
    ||||    
T  8355774 atat 8355771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 552 - 673
Target Start/End: Original strand, 22472935 - 22473058
Alignment:
Q  552 tgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggcttttta--aacttgattttaatgt 649  Q
    ||||| | ||||| |||||||||  |||||| |||||||||| ||||  |||| | ||| |||||||||||||   ||||||  ||||||||||| || |    
T  22472935 tgaaagtaaaattgtaatgttggtcgaaatttaaaacattgttggaagcattgttgaaaatatgttgtgttttaaatttttattaacttgattttgatat 22473034  T
Q  650 tggaaacaaaaaattgtatcgtct 673  Q
    || |||||||||||||||| ||||    
T  22473035 tgaaaacaaaaaattgtattgtct 22473058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 554 - 673
Target Start/End: Complemental strand, 55129951 - 55129833
Alignment:
Q  554 aaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttgga 653  Q
    ||||| ||||| ||||||||||| || || |||||||||| | ||| |||  | ||| ||||||||||||| | ||||| ||||| ||||||||||  ||    
T  55129951 aaaataaaattgtaatgttggataaattttaaaacattgttgaaaacattaatgaaaatatgttgtgttttagattttt-aacttaattttaatgtcaga 55129853  T
Q  654 aacaaaaaattgtatcgtct 673  Q
    ||||| ||||||||| ||||    
T  55129852 aacaacaaattgtattgtct 55129833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 668
Target Start/End: Original strand, 5640662 - 5640696
Alignment:
Q  634 aacttgattttaatgttggaaacaaaaaattgtat 668  Q
    |||||||||||||||||||||||||||||||||||    
T  5640662 aacttgattttaatgttggaaacaaaaaattgtat 5640696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 668
Target Start/End: Original strand, 5671937 - 5671971
Alignment:
Q  634 aacttgattttaatgttggaaacaaaaaattgtat 668  Q
    |||||||||||||||||||||||||||||||||||    
T  5671937 aacttgattttaatgttggaaacaaaaaattgtat 5671971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 668
Target Start/End: Original strand, 5681434 - 5681468
Alignment:
Q  634 aacttgattttaatgttggaaacaaaaaattgtat 668  Q
    |||||||||||||||||||||||||||||||||||    
T  5681434 aacttgattttaatgttggaaacaaaaaattgtat 5681468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 714 - 752
Target Start/End: Complemental strand, 25465872 - 25465834
Alignment:
Q  714 attggtttgatttggttcggattttattttaaaagtcaa 752  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  25465872 attggtttggtttggttcggattttattttaaaagtcaa 25465834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 607 - 673
Target Start/End: Original strand, 42363129 - 42363194
Alignment:
Q  607 aaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    |||| |||||||  ||| |||||||||| ||| ||||||||||||||||||||||||| ||||||||    
T  42363129 aaaaatatgttgcttttcggctttttaa-cttaattttaatgttggaaacaaaaaattatatcgtct 42363194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 411 - 504
Target Start/End: Complemental strand, 45629559 - 45629465
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaa-atcttagtcttttccatttcttacaaaa 504  Q
    |||||||||||  |||| |||||||||| ||||||| | | | ||||| |||||||||||||| || || ||||||||||  |||||||||||||    
T  45629559 tttcttctttgttttttctttcaaaaatctatttatgtactacttgaatttttaaagaatgataaatattttagtcttttgtatttcttacaaaa 45629465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 715 - 753
Target Start/End: Complemental strand, 54122092 - 54122054
Alignment:
Q  715 ttggtttgatttggttcggattttattttaaaagtcaac 753  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  54122092 ttggtttggtttggttcggattttattttaaaagtcaac 54122054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 239 - 308
Target Start/End: Original strand, 34185425 - 34185494
Alignment:
Q  239 attcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaacc 308  Q
    ||||| |||| ||||| |||||||||||||||| | |||| ||| |  ||||||||||||||||||||||    
T  34185425 attcagatcattttttgactcaaccgcatggttcggtttggtttgcactttttattttaccaaccaaacc 34185494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 475 - 548
Target Start/End: Original strand, 38651767 - 38651840
Alignment:
Q  475 aaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtt 548  Q
    |||||||||||||||  |||||||| ||||||| ||||| || ||||||  || |||| |||||||||||||||    
T  38651767 aaatcttagtcttttgtatttcttagaaaataggattacattttgtccatgttgttaacttggtctatgttgtt 38651840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 662
Target Start/End: Complemental strand, 45629374 - 45629310
Alignment:
Q  597 aaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaa 662  Q
    |||||||||| ||| |||||| ||||||  ||||||||  ||||||||||||||||||||||||||    
T  45629374 aaatattgctgaaaatatgttatgttttacctttttaat-ttgattttaatgttggaaacaaaaaa 45629310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 45629820 - 45629771
Alignment:
Q  153 ggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaat 202  Q
    ||||||||||| |||||  || ||||||||||||||||||||||||||||    
T  45629820 ggtgtttaaaaccgaacagattcaatagaaaaactgtaaactgaatcaat 45629771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 257 - 313
Target Start/End: Original strand, 8557323 - 8557379
Alignment:
Q  257 ctcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacc 313  Q
    ||||||||||||||||| |||| |||  | |||| ||||||||||||||||||||||    
T  8557323 ctcaaccgcatggtttggtttggtttgtgattttcattttaccaaccaaaccaaacc 8557379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 629 - 673
Target Start/End: Original strand, 30739555 - 30739599
Alignment:
Q  629 ttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    |||| |||||||||||||||||||||| ||||||||| |||||||    
T  30739555 tttttaacttgattttaatgttggaaataaaaaattgcatcgtct 30739599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 411 - 541
Target Start/End: Original strand, 2566048 - 2566178
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaa-atcttagtcttttccatttcttacaaaatagaa 509  Q
    |||||||||||| |||| | |||||||| |||| || | | | ||||||| ||| |||||||| || || ||||||||||  ||||||| |||||||| |    
T  2566048 tttcttctttgctttttctatcaaaaatatattaatgttctacttgaactcttagagaatgattaatattttagtcttttgtatttctttcaaaatagga 2566147  T
Q  510 ttactttctgtccacatttttaatttggtcta 541  Q
    ||||||| || |||   |||||||||||||||    
T  2566148 ttactttttgccca-tgttttaatttggtcta 2566178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 254 - 313
Target Start/End: Complemental strand, 4670102 - 4670043
Alignment:
Q  254 ttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacc 313  Q
    |||||| || |||||||||| |||||||| ||||||||||||||  ||||||| ||||||    
T  4670102 ttactccactgcatggtttgttttgatttgcggtttttattttattaaccaaatcaaacc 4670043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 456 - 546
Target Start/End: Complemental strand, 21238359 - 21238268
Alignment:
Q  456 gaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctg-tccacatttttaatttggtctatgttg 546  Q
    ||||||||| |||||||| |||| |||||| ||| |||||||||| ||| ||||||  ||| || ||||  ||||||||||||| |||||||    
T  21238359 gaacttttagagaatgataaaattttagtcatttgcatttcttaccaaagagaattgttttttgatccatgtttttaatttggtatatgttg 21238268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 694 - 753
Target Start/End: Complemental strand, 27054166 - 27054108
Alignment:
Q  694 ccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    ||||||||||||||| | ||||||||||| ||||||| | |||||||||||||| |||||    
T  27054166 ccgatccaatccaaatc-gcattggtttggtttggtttgaattttattttaaaattcaac 27054108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 687 - 746
Target Start/End: Complemental strand, 37045407 - 37045349
Alignment:
Q  687 gcaccaaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaa 746  Q
    |||||||||||| ||| ||||| ||  ||||||||| |||||||||||||||||||||||    
T  37045407 gcaccaaccgatacaacccaaa-ccatattggtttggtttggttcggattttattttaaa 37045349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 707 - 754
Target Start/End: Complemental strand, 38680885 - 38680838
Alignment:
Q  707 aaaccgcattggtttgatttggttcggattttattttaaaagtcaact 754  Q
    |||||| ||||||||| ||||||||  |||||||||||||||||||||    
T  38680885 aaaccgaattggtttggtttggttcaaattttattttaaaagtcaact 38680838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 635 - 753
Target Start/End: Original strand, 50578937 - 50579051
Alignment:
Q  635 acttgattttaatgttggaaacaaaaaattgtatcgtctggtnnnnnnnnntgcaccaaccgatccaatccaaaaccgcattggtttgatttggttcgga 734  Q
    |||||||||||||||||||||| |||||||| ||||||| |           ||||||||| |||||| || ||||| |||||||||| ||| |||||||    
T  50578937 acttgattttaatgttggaaactaaaaattgaatcgtctcg--aaaaagctcgcaccaaccaatccaa-cccaaaccacattggtttggttt-gttcgga 50579032  T
Q  735 ttttattttaaaagtcaac 753  Q
    ||||||||| |||||||||    
T  50579033 ttttatttttaaagtcaac 50579051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 186
Target Start/End: Complemental strand, 4555255 - 4555221
Alignment:
Q  152 gggtgtttaaaatcgaaccaatccaatagaaaaac 186  Q
    ||||||| |||||||||||||||||||||||||||    
T  4555255 gggtgttcaaaatcgaaccaatccaatagaaaaac 4555221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 552 - 602
Target Start/End: Original strand, 45915075 - 45915125
Alignment:
Q  552 tgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatat 602  Q
    ||||||| ||||| ||||||||||||||||| |||||||||| | ||||||    
T  45915075 tgaaaataaaattgtaatgttggatgaaatttaaaacattgttgaaaatat 45915125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 54122943 - 54122893
Alignment:
Q  153 ggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatc 203  Q
    |||||| |||||||||||||||||||| |||||| |||||  |||||||||    
T  54122943 ggtgttcaaaatcgaaccaatccaataaaaaaaccgtaaatcgaatcaatc 54122893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 4764229 - 4764168
Alignment:
Q  252 ttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacc 313  Q
    ||||||||||| | |||||||| ||| ||||  ||||||||||||| |||||||| ||||||    
T  4764229 ttttactcaactgtatggtttgttttaatttgtggtttttattttagcaaccaaaacaaacc 4764168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 593
Target Start/End: Complemental strand, 25466019 - 25465978
Alignment:
Q  552 tgaaaatgaaattttaatgttggatgaaattaaaaacattgt 593  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||    
T  25466019 tgaaaatgaaattgtaatgtttgatgaaatttaaaacattgt 25465978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 601 - 662
Target Start/End: Complemental strand, 48167445 - 48167385
Alignment:
Q  601 attgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaa 662  Q
    |||| ||||| ||||||||||||| | |||||||  || |||||||||||||||||||||||    
T  48167445 attgttaaaaatatgttgtgttttagatttttaat-ttcattttaatgttggaaacaaaaaa 48167385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 424 - 522
Target Start/End: Original strand, 55467369 - 55467469
Alignment:
Q  424 ttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatc--ttagtcttttccatttcttacaaaatagaattactttctgtc 521  Q
    |||| |||||||||||||||||| | | | ||||||| ||| |||||||| |||    ||||||||||  |||||||||||||||  |||||||| ||||    
T  55467369 ttttctttcaaaaatgtatttatgtactacttgaactcttagagaatgataaaaaaaattagtcttttgtatttcttacaaaatatgattactttttgtc 55467468  T
Q  522 c 522  Q
    |    
T  55467469 c 55467469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 4e-34; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 411 - 673
Target Start/End: Original strand, 15452382 - 15452643
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaat 510  Q
    |||||||||||  ||||||||||||||||||||||  ||| | ||||||||||| |||||||| || ||| | | |||| ||| ||||||| |||| |||    
T  15452382 tttcttctttgtgttttatttcaaaaatgtatttacgtgctacttgaacttttagagaatgataaattctaaatattttacatctcttacataatacaat 15452481  T
Q  511 tactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaa 610  Q
    || ||| ||| ||| ||||||||||||| ||||||||   ||| |||| ||| | |||||| | | |||||||||||||||||||| |   ||| | |||    
T  15452482 tattttgtgttcacgtttttaatttggtttatgttgtaatgtgtaaataaaaatgtaatgtggaacgaaattaaaaacattgtcgg-atccttgatgaaa 15452580  T
Q  611 ttatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
     |||||||||||||  | |||| |||| |||||| |||||||||| ||||||||| |||||||    
T  15452581 atatgttgtgttttaccgtttttaactcgattttgatgttggaaataaaaaattggatcgtct 15452643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 235 - 534
Target Start/End: Original strand, 9012363 - 9012674
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||||||  |||| |||||||||||||||||||||||| ||||     ||||||| || ||||||||| ||||||  |||| ||||||||||||||| |    
T  9012363 atgtattcggatcatttttttactcaaccgcatggtttggtttg-----cggttttcatcttaccaaccgaaccaatacaaaccaaaccgcaacataaaa 9012457  T
Q  335 aaaaacactaattaa--atatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcat-aaatgacatatat--------------tttcttc 417  Q
    |||||||||||||||  |||||| | ||   |||||||||  |  ||| ||||| ||||||| || |||||||||||||              |||||||    
T  9012458 aaaaacactaattaaacatatgttacctaaaccaatactcaaatgaactcaatggaaacttttataaaatgacatatattttctcttgttaagtttcttc 9012557  T
Q  418 tttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttc 517  Q
    |||||  || | |||||| |||||||||| ||| | || |||||||| |||||||| |||||||||  |||| ||||||||||||||||  ||||||||     
T  9012558 tttgctattaacttcaaagatgtatttatgtgctacttaaacttttagagaatgataaaatcttagctttttgcatttcttacaaaataagattactttt 9012657  T
Q  518 tgtccacatttttaatt 534  Q
    |||| || |||||||||    
T  9012658 tgtcaacgtttttaatt 9012674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 414 - 548
Target Start/End: Complemental strand, 40436801 - 40436667
Alignment:
Q  414 cttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattac 513  Q
    ||||||||| |||||||| ||||| |||||||| ||| |||| || ||||| |||||||| ||||||||||||||| ||||||||| ||||||  |||||    
T  40436801 cttctttgctttttatttaaaaaacgtatttatgtgctatttaaaattttagagaatgataaaatcttagtctttttcatttcttataaaatatgattac 40436702  T
Q  514 tttctgtccacatttttaatttggtctatgttgtt 548  Q
     || ||||||  ||||||| |||||||||||||||    
T  40436701 attttgtccatgtttttaacttggtctatgttgtt 40436667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 207 - 532
Target Start/End: Complemental strand, 28442053 - 28441715
Alignment:
Q  207 actgcaaaaagctgtatttggtttcgatatgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaa 306  Q
    |||||||||| || |||||||||| |||  ||||| |||| | ||||||||||||||| || ||||| |||| |||||||||||||||| ||||||| ||    
T  28442053 actgcaaaaaactatatttggtttagat--gtatttaaataa-ttttttactcaaccgtattgtttggtttggtttacggtttttatttaaccaaccgaa 28441957  T
Q  307 ccaaaccaaatcaaacc-gcaacataagaaaaaacactaattaa--atatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcat-aaatg 402  Q
    |||||||||| |||||| |||| ||||||||||  | |||| ||  |||| | |  |    |||||||| ||||||| ||||||||||||| || |||||    
T  28441956 ccaaaccaaaccaaaccggcaatataagaaaaa--attaatcaaatatatataacatagatcaatactcataaaaactcaatgaaaacttttataaaatg 28441859  T
Q  403 acatat--------------attttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttt 488  Q
    ||||||              | |||||||||||  ||||||||||||||||  ||||| ||| | ||||||||||| | |||||| |||| |||||||||    
T  28441858 acatattctttcttttgttaagtttcttctttgttttttatttcaaaaatggttttatgtgctacttgaacttttagataatgataaaattttagtcttt 28441759  T
Q  489 tccatttcttacaaaatagaattactttctgtccacatttttaa 532  Q
    | ||||||||| ||||||  |||||||| | ||||| |||||||    
T  28441758 tgcatttcttaaaaaatacgattactttttttccacgtttttaa 28441715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 424 - 660
Target Start/End: Complemental strand, 41346264 - 41346016
Alignment:
Q  424 ttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtcca 523  Q
    |||||||| |||||||||||||| ||  | ||||| ||||| | | |||| |||||| | ||||||  ||||||| |||||||  |||||||| ||||||    
T  41346264 ttttattttaaaaatgtatttatgtgttacttgaatttttagatagtgataaaatctcaatcttttgtatttctttcaaaataagattactttttgtcca 41346165  T
Q  524 catttttaatttggtctatgt------------tgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaat 611  Q
    |||| ||| |||| | |||||            |||| | ||||||||||||| ||||||||||| |||||  ||||||||| ||||| || |||||||     
T  41346164 cattattattttgttatatgtagcagggaacgttgttgaatgaaaatgaaattgtaatgttggataaaattttaaacattgttggaaacatggctaaaaa 41346065  T
Q  612 tatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaa 660  Q
    ||||||||||||| || |||| |||||||| ||||||||| ||||||||    
T  41346064 tatgttgtgttttagcctttttaacttgatgttaatgttgtaaacaaaa 41346016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 235 - 355
Target Start/End: Original strand, 26774860 - 26774980
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||||||| |||  ||| |||||||||||||||||||| ||   ||| | |||||||||||||||||| ||||||| |||| |||||||||| ||||||    
T  26774860 atgtattcatatcgttttcttactcaaccgcatggtttggttcagtttgcagtttttattttaccaaccgaaccaaatcaaaccaaaccgcaaaataaga 26774959  T
Q  335 aaaaacactaattaaatatgt 355  Q
    ||||| ||||| |||| ||||    
T  26774960 aaaaaaactaaataaacatgt 26774980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 454 - 662
Target Start/End: Original strand, 38926192 - 38926392
Alignment:
Q  454 ttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtttagtg 553  Q
    ||||||||||| | |||||| |||||||| |||||| |||||||| || ||||  |||| ||| ||||||  ||||| |||||||||| ||| ||  |||    
T  38926192 ttgaacttttatataatgataaaatcttaatcttttacatttcttgcacaataagattattttttgtccatgttttttatttggtctacgttattgggtg 38926291  T
Q  554 aaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttgga 653  Q
    ||||||||||| ||       | |||||  |||||||||| | |||||||  | ||| |||||||||||||  |||||| |||||||||||||||||| |    
T  38926292 aaaatgaaattgta-------acgaaatataaaacattgttgtaaatatttttgaaaatatgttgtgttttaccttttt-aacttgattttaatgttgaa 38926383  T
Q  654 aacaaaaaa 662  Q
    |||||||||    
T  38926384 aacaaaaaa 38926392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 509 - 667
Target Start/End: Original strand, 14185686 - 14185840
Alignment:
Q  509 attactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaa 608  Q
    |||||||| ||||||||||||||||||||||||||||| |  || ||||||||||| ||||||||||||||||  |||| ||||| | ||  | || |      
T  14185686 attactttttgtccacatttttaatttggtctatgttgctgggtaaaaatgaaattgtaatgttggatgaaatataaaagattgttgaaagcaatgttgg 14185785  T
Q  609 aattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgta 667  Q
    || |||||| | ||||  ||||   ||||||||||||||||| ||||||||||||||||    
T  14185786 aaatatgttttatttta-cttt---aacttgattttaatgttcgaaacaaaaaattgta 14185840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 152 - 353
Target Start/End: Original strand, 22810625 - 22810829
Alignment:
Q  152 gggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatc-----gaaactgcaaaaagctgtatttggtttcgatatgtattcaaat 246  Q
    ||||||| |||| ||||||||||||| |||||||| |||||  ||| |||||     |||||||||||||     ||||||||| |||  |||||  |||    
T  22810625 gggtgttcaaaaccgaaccaatccaaaagaaaaaccgtaaatcgaaccaatccacacgaaactgcaaaaaatcacatttggtttggat--gtatttgaat 22810722  T
Q  247 cactttttt-actcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaa 345  Q
    || |||||| ||| |||||||||||||| || | ||| |  |||| ||||||| |||| ||||||||||||||||||| ||| ||||| |||||||||||    
T  22810723 cattttttttactaaaccgcatggtttggttaggtttgcaattttgattttacaaaccgaaccaaaccaaatcaaaccacaatataag-aaaaacactaa 22810821  T
Q  346 ttaaatat 353  Q
    ||||||||    
T  22810822 ttaaatat 22810829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 235 - 541
Target Start/End: Original strand, 24681611 - 24681934
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataaga 334  Q
    ||||||||  |||| |||||| |||||||| |||||||| || | ||| |||| || ||||||||| || ||| |||||||| |||||| ||| ||||||    
T  24681611 atgtattcggatcaattttttgctcaaccgtatggtttggttcggtttgcggtcttgattttaccagccgaactaaaccaaaacaaaccacaatataaga 24681710  T
Q  335 aaaaacactaattaaatatgt--catctgcgccaatactcgtaaaaacccaatgaaaactttcataaa-tgacatatatttt---------------ctt 416  Q
    |||| |||||||||||||| |  |||||    ||||| |  ||||||| ||||| ||||||| ||||| |||||||| ||||               |||    
T  24681711 aaaa-cactaattaaatatatatcatctagatcaataattataaaaactcaatggaaactttaataaaatgacatatttttttctcttgttaagtttctt 24681809  T
Q  417 ctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatga-tgaaatcttagtcttttccatttcttacaaaatagaattactt 515  Q
    |||||  |||| | |||||||||||||||| ||| | ||||||| ||| ||||||| | |||| ||||||||||  |||||||||||||||| | |||||    
T  24681810 ctttgttttttctatcaaaaatgtatttatgtgctacttgaactcttagagaatgattaaaattttagtcttttatatttcttacaaaataggagtactt 24681909  T
Q  516 tctgtccacatttttaatttggtcta 541  Q
    | |||||||  |||||||||||||||    
T  24681910 tttgtccac-gttttaatttggtcta 24681934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 574 - 665
Target Start/End: Original strand, 3129439 - 3129529
Alignment:
Q  574 gatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattg 665  Q
    ||||||||| |||||||||||||||| |||||| ||| |||||| |||||| | ||||| |||| ||||||||||||| |||||||||||||    
T  3129439 gatgaaatttaaaacattgtcggaaacattgctgaaaatatgttatgttttagattttt-aactcgattttaatgttgaaaacaaaaaattg 3129529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 413 - 512
Target Start/End: Complemental strand, 28801935 - 28801836
Alignment:
Q  413 tcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaatta 512  Q
    |||||||||| |||||||| |||||||||||||||||  | ||||||||||| |||||||| ||| ||||||||||| || || ||||| ||||| ||||    
T  28801935 tcttctttgcattttattttaaaaatgtatttatatgttaattgaacttttagagaatgataaaaccttagtcttttgcaatttttacataataggatta 28801836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 571 - 673
Target Start/End: Original strand, 12074060 - 12074161
Alignment:
Q  571 ttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcg 670  Q
    |||||||||||  ||| |||||| ||||| ||||||  || ||||||||||||| || ||||||| || ||||||||||||||||||||||||||||| |    
T  12074060 ttggatgaaatataaagcattgttggaaacattgctcgaaatatgttgtgtttttgcattttaaa-ttaattttaatgttggaaacaaaaaattgtattg 12074158  T
Q  671 tct 673  Q
    |||    
T  12074159 tct 12074161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 526 - 624
Target Start/End: Complemental strand, 44337022 - 44336924
Alignment:
Q  526 tttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgtttt 624  Q
    ||||||||||||| |||||||||| |||||||||| | | |||||| | ||||||||||||| ||||||| ||| |||| | ||| |||||||||||||    
T  44337022 tttttaatttggtttatgttgtttggtgaaaatgagaatgtaatgtggaatgaaattaaaaatattgtcgaaaacattgttgaaaatatgttgtgtttt 44336924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 687 - 752
Target Start/End: Original strand, 9012821 - 9012885
Alignment:
Q  687 gcaccaaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaa 752  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||||||||| |||||||||||||||    
T  9012821 gcaccaaccgatccaacccaaa-ccgcattggtttggtttggttcggattgtattttaaaagtcaa 9012885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 688 - 753
Target Start/End: Complemental strand, 19539475 - 19539411
Alignment:
Q  688 caccaaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    ||||||||||||||| ||||  ||||||||||||| ||||||||||||||||||||||||||||||    
T  19539475 caccaaccgatccaacccaat-ccgcattggtttggtttggttcggattttattttaaaagtcaac 19539411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 254 - 338
Target Start/End: Original strand, 12659813 - 12659897
Alignment:
Q  254 ttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaa 338  Q
    |||||||||||||||||||| ||   ||| |||||| ||||||||||||| |||||||||||| |||||| ||||||| ||||||    
T  12659813 ttactcaaccgcatggtttggttcagtttgcggtttctattttaccaaccgaaccaaaccaaaccaaaccacaacataggaaaaa 12659897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 454 - 536
Target Start/End: Original strand, 12073976 - 12074058
Alignment:
Q  454 ttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttg 536  Q
    ||||||||| | |||||||| ||||||||||||||  |||||||||||||||  ||||||||| ||||||  |||||||||||    
T  12073976 ttgaactttaagagaatgataaaatcttagtctttcacatttcttacaaaatgaaattactttttgtccatgtttttaatttg 12074058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 250 - 327
Target Start/End: Original strand, 30252639 - 30252716
Alignment:
Q  250 ttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaa 327  Q
    ||||||| ||| | |||||||||  |||| |||||||||||||||||||||||| ||||||||||||| ||| |||||    
T  30252639 ttttttattcatctgcatggttttgtttggtttacggtttttattttaccaaccgaaccaaaccaaattaaatcgcaa 30252716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 235 - 332
Target Start/End: Original strand, 44334570 - 44334667
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataa 332  Q
    ||||||||| |||||||||||||||||||| ||| |||| |||| ||| ||||||| |||||||||| |  | ||||||| | |||||||||| ||||    
T  44334570 atgtattcatatcacttttttactcaaccgtatgatttggtttggtttgcggttttcattttaccaatcgtagcaaaccataccaaaccgcaatataa 44334667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 235 - 323
Target Start/End: Complemental strand, 11219524 - 11219436
Alignment:
Q  235 atgtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaacc 323  Q
    ||||||||  |||| |||||||||||| | ||||||||| || | ||| ||||||| |||||||||||| |||||||||||| ||||||    
T  11219524 atgtattcggatcatttttttactcaatcacatggtttggttcggtttgcggttttgattttaccaaccgaaccaaaccaaaccaaacc 11219436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 475 - 591
Target Start/End: Complemental strand, 33566243 - 33566128
Alignment:
Q  475 aaatcttagtcttttccatttcttacaaaatagaattactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttgg 574  Q
    |||| ||||||||||  |||||||||||| | |||||||||| ||||||| |||| ||||||| |||  | |||   ||||||| ||||| |||||||||    
T  33566243 aaattttagtcttttgtatttcttacaaagttgaattactttttgtccacgtttt-aatttgggctacatagttggatgaaaataaaattataatgttgg 33566145  T
Q  575 atgaaattaaaaacatt 591  Q
    |||||||| ||||||||    
T  33566144 atgaaatttaaaacatt 33566128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 245 - 316
Target Start/End: Complemental strand, 8036133 - 8036062
Alignment:
Q  245 atcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaa 316  Q
    |||| ||| |||||||||| ||||||||| |||| ||||| ||||| |||||||||||| ||||||||||||    
T  8036133 atcattttcttactcaaccacatggtttggtttggtttacagttttcattttaccaaccgaaccaaaccaaa 8036062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 250 - 313
Target Start/End: Complemental strand, 13325836 - 13325773
Alignment:
Q  250 ttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacc 313  Q
    |||||||||||||||||||||||| || | ||| ||||||| |||||| |||||||||||||||    
T  13325836 ttttttactcaaccgcatggtttggttcggtttgcggttttgattttatcaaccaaaccaaacc 13325773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 411 - 469
Target Start/End: Original strand, 3129365 - 3129423
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaa 469  Q
    |||||||||||| ||||||||||||||||||||||| ||| | ||||||||||| ||||    
T  3129365 tttcttctttgcattttatttcaaaaatgtatttatgtgctacttgaacttttagagaa 3129423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 511 - 593
Target Start/End: Complemental strand, 6591489 - 6591407
Alignment:
Q  511 tactttctgtccacatttttaatttggtctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgt 593  Q
    |||||| ||||||||||| | ||||| | | |||| ||| |||||||| ||||| |||||||||||||||||||||| |||||    
T  6591489 tactttttgtccacatttattatttgatatgtgttttttggtgaaaataaaattgtaatgttggatgaaattaaaaatattgt 6591407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 566 - 668
Target Start/End: Complemental strand, 28801829 - 28801728
Alignment:
Q  566 taatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattg 665  Q
    ||||||||||||||||| |||||||||| | ||| || ||| ||| || ||||||||||  ||||||   |||||||||||||||| |||||||| ||||    
T  28801829 taatgttggatgaaattcaaaacattgttgaaaacat-gctgaaaatacgttgtgttttaacttttttgtcttgattttaatgttgaaaacaaaagattg 28801731  T
Q  666 tat 668  Q
    |||    
T  28801730 tat 28801728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 40437072 - 40436910
Alignment:
Q  153 ggtgtttaaaatcgaaccaatccaatagaaaaactgtaaactgaatcaatc------gaaactgcaaaaagctgtatttggtttcgatatgtattcaaat 246  Q
    ||||||||||| |||||||||||||||||||||||| |||   |||||| |      ||||||||||||| | | ||||||||  |  ||||| ||| ||    
T  40437072 ggtgtttaaaaccgaaccaatccaatagaaaaactgcaaatcaaatcaacccaaaatgaaactgcaaaaaaccgcatttggttcgg--atgtaatcagat 40436975  T
Q  247 cacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaa 311  Q
    || | | || ||||||||||| |||| ||||  ||| ||||||| ||||||||||||||||||||    
T  40436974 cattgtcttgctcaaccgcatagttttatttagtttgcggttttcattttaccaaccaaaccaaa 40436910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 411 - 484
Target Start/End: Complemental strand, 44337114 - 44337042
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagt 484  Q
    |||||||||| | |||||| ||||||| ||||||||| || | |||||||||||||||||||| ||||||||||    
T  44337114 tttcttcttttctttttatgtcaaaaa-gtatttatacgctacttgaacttttaaagaatgataaaatcttagt 44337042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 293 - 353
Target Start/End: Complemental strand, 1271634 - 1271575
Alignment:
Q  293 ttttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaatat 353  Q
    |||| |||||| |||||||||||| |||||||||| ||||| |||||||||||||||||||    
T  1271634 tttttccaaccgaaccaaaccaaaccaaaccgcaatataag-aaaaacactaattaaatat 1271575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 613 - 673
Target Start/End: Complemental strand, 6617096 - 6617037
Alignment:
Q  613 atgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    |||||||||||| ||||||||| || |||||||| ||||||||||||||||||||| ||||    
T  6617096 atgttgtgttttagctttttaa-ctcgattttaaagttggaaacaaaaaattgtattgtct 6617037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 415 - 483
Target Start/End: Complemental strand, 27674882 - 27674814
Alignment:
Q  415 ttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttag 483  Q
    |||||||| |||||||||||||  |||||||| ||| | |||||||||| ||||||||| |||||||||    
T  27674882 ttctttgctttttatttcaaaagcgtatttatgtgctacttgaactttttaagaatgataaaatcttag 27674814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 431 - 541
Target Start/End: Complemental strand, 13325647 - 13325537
Alignment:
Q  431 tcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaa-tcttagtcttttccatttcttacaaaatagaattactttctgtccacatttt 529  Q
    |||||||| ||| ||| ||| | ||||||| ||| |||||||| ||| | |||||||||| ||||||||||||||||  |||||||| ||| |||  |||    
T  13325647 tcaaaaatatatatatgtgctacttgaactcttagagaatgattaaaattttagtcttttgcatttcttacaaaatatgattactttttgttcac-gttt 13325549  T
Q  530 taatttggtcta 541  Q
    ||||||||||||    
T  13325548 taatttggtcta 13325537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 419 - 541
Target Start/End: Original strand, 22810915 - 22811036
Alignment:
Q  419 ttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatga-tgaaatcttagtcttttccatttcttacaaaatagaattactttc 517  Q
    |||| |||| | |||||||||||||||| ||| | ||||||| ||| ||||||| | |||| ||| ||||||  ||||||||||||||| || ||||||     
T  22810915 ttgctttttctatcaaaaatgtatttatgtgctacttgaactcttatagaatgattaaaattttaatcttttgtatttcttacaaaata-aaatactttt 22811013  T
Q  518 tgtccacatttttaatttggtcta 541  Q
    |||||||  |||||||||||||||    
T  22811014 tgtccac-gttttaatttggtcta 22811036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 634 - 673
Target Start/End: Original strand, 28073129 - 28073168
Alignment:
Q  634 aacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  28073129 aacttgattttaatgttgaaaacaaaaaattgtatcgtct 28073168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 257 - 316
Target Start/End: Original strand, 31477759 - 31477818
Alignment:
Q  257 ctcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaa 316  Q
    ||||||| ||||||||| |||| ||| ||||||| |||||||||||| ||||||||||||    
T  31477759 ctcaaccacatggtttggtttggtttgcggttttcattttaccaaccgaaccaaaccaaa 31477818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 431 - 540
Target Start/End: Complemental strand, 11219302 - 11219193
Alignment:
Q  431 tcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaa-tcttagtcttttccatttcttacaaaatagaattactttctgtccacatttt 529  Q
    |||||||||||||||| ||  | ||||||| ||| |||||||| ||| | |||||||| |  |||||||||||||||| |||||||| |||| ||  |||    
T  11219302 tcaaaaatgtatttatgtgttacttgaactcttagagaatgattaaaattttagtcttgtgtatttcttacaaaataggattactttttgtctac-gttt 11219204  T
Q  530 taatttggtct 540  Q
    |||||||||||    
T  11219203 taatttggtct 11219193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 15452210 - 15452272
Alignment:
Q  251 tttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacc 313  Q
    ||||||||||| ||||||||||| |||||||| ||||| | ||||||| ||||||| ||||||    
T  15452210 tttttactcaatcgcatggtttggtttgattttcggttctcattttactaaccaaatcaaacc 15452272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 35687879 - 35687941
Alignment:
Q  251 tttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacc 313  Q
    |||||||||||||||||| |||| |||||||| || |||||||||||  |||| |||||||||    
T  35687879 tttttactcaaccgcatgatttggtttgatttgcgatttttattttagtaaccgaaccaaacc 35687941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 715 - 753
Target Start/End: Original strand, 36340771 - 36340809
Alignment:
Q  715 ttggtttgatttggttcggattttattttaaaagtcaac 753  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  36340771 ttggtttggtttggttcggattttattttaaaagtcaac 36340809  T

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Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 687 - 753
Target Start/End: Complemental strand, 40436535 - 40436470
Alignment:
Q  687 gcaccaaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaac 753  Q
    |||||||||||||||| ||||| ||||||||||||| || |||||  |||||||||| |||||||||    
T  40436535 gcaccaaccgatccaacccaaa-ccgcattggtttggttcggttcaaattttatttttaaagtcaac 40436470  T

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Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 251 - 312
Target Start/End: Original strand, 28072679 - 28072740
Alignment:
Q  251 tttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaac 312  Q
    |||||||||||||||||| |||| |||| ||| |||||||||||||| ||||  ||||||||    
T  28072679 tttttactcaaccgcatgttttggtttggtttgcggtttttattttagcaactgaaccaaac 28072740  T

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Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 353
Target Start/End: Original strand, 3155622 - 3155665
Alignment:
Q  309 aaaccaaatcaaaccgcaacataagaaaaaacactaattaaatat 353  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||    
T  3155622 aaaccaaaccaaaccgcaacataa-aaaaaacactaattaaatat 3155665  T

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Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 600 - 664
Target Start/End: Complemental strand, 4785418 - 4785355
Alignment:
Q  600 tattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaatt 664  Q
    ||||||||||| ||| |||||||||  ||||||||  ||||||||||||||||||| ||||||||    
T  4785418 tattgctaaaaatatattgtgttttaactttttaat-ttgattttaatgttggaaaaaaaaaatt 4785355  T

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Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 4785768 - 4785700
Alignment:
Q  245 atcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaacc 313  Q
    |||| |||||||||||||||||||||||| || | ||| | ||||| ||||||| ||||||| ||||||    
T  4785768 atcaattttttactcaaccgcatggtttggttcggtttgcagttttgattttacaaaccaaatcaaacc 4785700  T

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Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 613 - 673
Target Start/End: Complemental strand, 6591401 - 6591342
Alignment:
Q  613 atgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    |||||||||||| ||||||||| || |||||||| |||||||| |||||||||||| ||||    
T  6591401 atgttgtgttttagctttttaa-ctcgattttaaagttggaaataaaaaattgtattgtct 6591342  T

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Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 14549829 - 14549789
Alignment:
Q  153 ggtgtttaaaatcgaaccaatccaatagaaaaactgtaaac 193  Q
    ||||||||||| |||||||| ||||||||||||||||||||    
T  14549829 ggtgtttaaaaccgaaccaacccaatagaaaaactgtaaac 14549789  T

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Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 456 - 496
Target Start/End: Original strand, 32063900 - 32063940
Alignment:
Q  456 gaacttttaaagaatgatgaaatcttagtcttttccatttc 496  Q
    |||||||||||||||||| ||||||||||||||| ||||||    
T  32063900 gaacttttaaagaatgataaaatcttagtcttttacatttc 32063940  T

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Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 687 - 753
Target Start/End: Complemental strand, 33566060 - 33565990
Alignment:
Q  687 gcaccaaccgatccaatccaaaaccgca-----ttggtttgatttggttcggattttattttaaaagtcaac 753  Q
    |||||||||||||||||| |||||||||     |||||||| ||||||||| ||||||||||| ||||||||    
T  33566060 gcaccaaccgatccaatc-aaaaccgcactggtttggtttggtttggttcgaattttattttagaagtcaac 33565990  T

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Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 411 - 529
Target Start/End: Original strand, 37162367 - 37162485
Alignment:
Q  411 tttcttctttgccttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatga-tgaaatcttagtcttttccatttcttacaaaatagaa 509  Q
    |||||||||| | |||| | |||||||||||||||| ||  | ||||||| ||| ||||||| | |||| ||||||||||  |||| ||||||||||  |    
T  37162367 tttcttctttactttttctatcaaaaatgtatttatgtgttacttgaactcttagagaatgattaaaattttagtcttttgtattt-ttacaaaataaga 37162465  T
Q  510 ttactttctgtccacatttt 529  Q
    ||||||| ||||||| ||||    
T  37162466 ttactttttgtccacgtttt 37162485  T

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Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 715 - 753
Target Start/End: Complemental strand, 44336844 - 44336806
Alignment:
Q  715 ttggtttgatttggttcggattttattttaaaagtcaac 753  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  44336844 ttggtttggtttggttcggattgtattttaaaagtcaac 44336806  T

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Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 691 - 752
Target Start/End: Original strand, 12193451 - 12193506
Alignment:
Q  691 caaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaa 752  Q
    |||||||||||||||||| ||||||||     ||||||||| ||||||||||||||||||||    
T  12193451 caaccgatccaatccaaa-ccgcattg-----atttggttcagattttattttaaaagtcaa 12193506  T

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Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 691 - 752
Target Start/End: Original strand, 12437879 - 12437934
Alignment:
Q  691 caaccgatccaatccaaaaccgcattggtttgatttggttcggattttattttaaaagtcaa 752  Q
    |||||||||||||||||| ||||||||     ||||||||| ||||||||||||||||||||    
T  12437879 caaccgatccaatccaaa-ccgcattg-----atttggttcagattttattttaaaagtcaa 12437934  T

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Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 612 - 673
Target Start/End: Original strand, 15272213 - 15272274
Alignment:
Q  612 tatgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    |||||||||||||  | |||| |||| |||||| |||||||||| ||||||||| |||||||    
T  15272213 tatgttgtgttttaccgtttttaactcgattttgatgttggaaataaaaaattggatcgtct 15272274  T

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Target: scaffold0688 (Bit Score: 53; Significance: 6e-21; HSPs: 4)
Name: scaffold0688
Description:

Target: scaffold0688; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 552 - 668
Target Start/End: Complemental strand, 1392 - 1278
Alignment:
Q  552 tgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttg 651  Q
    ||||||||||||||||||||| ||||||||| ||||||||||  |||| ||||||  || ||||||||||||| | ||| | ||||| ||||||||||||    
T  1392 tgaaaatgaaattttaatgttcgatgaaatttaaaacattgtttgaaacattgctggaaatatgttgtgttttag-tttattaactt-attttaatgttg 1295  T
Q  652 gaaacaaaaaattgtat 668  Q
     ||||||||||||||||    
T  1294 aaaacaaaaaattgtat 1278  T

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Target: scaffold0688; HSP #2
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 552 - 668
Target Start/End: Complemental strand, 7961 - 7847
Alignment:
Q  552 tgaaaatgaaattttaatgttggatgaaattaaaaacattgtcggaaatattgctaaaattatgttgtgttttggctttttaaacttgattttaatgttg 651  Q
    ||||||||||||||||||||| ||||||||| ||||||||||  |||| ||||||  || ||||||||||||| | ||| | ||||| ||||||||||||    
T  7961 tgaaaatgaaattttaatgttcgatgaaatttaaaacattgtttgaaacattgctggaaatatgttgtgttttag-tttattaactt-attttaatgttg 7864  T
Q  652 gaaacaaaaaattgtat 668  Q
     ||||||||||||||||    
T  7863 aaaacaaaaaattgtat 7847  T

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Target: scaffold0688; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 265 - 350
Target Start/End: Complemental strand, 1707 - 1623
Alignment:
Q  265 catggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaa 350  Q
    ||||||||| |||| ||| |||||||||||||||||||| || ||||||||| |||||| |||||||||| |||||||||||||||    
T  1707 catggtttggtttggtttgcggtttttattttaccaaccgaatcaaaccaaaccaaaccacaacataaga-aaaacactaattaaa 1623  T

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Target: scaffold0688; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 284 - 350
Target Start/End: Complemental strand, 3281 - 3216
Alignment:
Q  284 cggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaaa 350  Q
    |||||||||||||||||||| |||||||||||| |||||| |||||||||| |||||||||||||||    
T  3281 cggtttttattttaccaaccgaaccaaaccaaaccaaaccacaacataaga-aaaacactaattaaa 3216  T

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Target: scaffold0001 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 237 - 549
Target Start/End: Complemental strand, 428200 - 427874
Alignment:
Q  237 gtattcaaatcacttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaa 336  Q
    ||||||| |||||||||| ||| |||||| ||||||| || | || ||| ||||||||||||||||| ||| ||||||||||||| | |||||| || ||    
T  428200 gtattcagatcacttttt-actaaaccgcgtggtttggttcggtt-acgatttttattttaccaaccgaactaaaccaaatcaaatctcaacatcag-aa 428104  T
Q  337 aaacactaattaa--atatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttcat-aaatgacatatattttc-----------ttct--tt 420  Q
    ||| | |||||||  ||||||||  |   ||||||||| | ||||| ||||||||||||| || ||||||||||| |||||           ||||  ||    
T  428103 aaataataattaaacatatgtcacataaaccaatactcattaaaactcaatgaaaacttttataaaatgacatattttttctcttgttaagtttcttctt 428004  T
Q  421 gcc-ttttatttcaaaaatgtatttatatgcaatttgaacttttaaagaatgatgaaatcttagtcttttccatttcttacaaaatagaattactttctg 519  Q
    ||| ||||||||||||||| ||||||| ||  |   ||| | ||| |||||||| ||||||||  |||||  |||||| ||| |||| ||||||||| ||    
T  428003 gcctttttatttcaaaaatatatttatgtgttacaagaattgttagagaatgataaaatcttaaacttttatatttctgacataataaaattactttttg 427904  T
Q  520 tccacatttttaatttggtctatgttgttt 549  Q
    ||||  ||||||||||| ||||||||||||    
T  427903 tccatgtttttaatttgctctatgttgttt 427874  T

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Target: scaffold0210 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 250 - 321
Target Start/End: Original strand, 18938 - 19009
Alignment:
Q  250 ttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaa 321  Q
    |||||||||||||  ||||||||| |||| ||| ||| ||| |||||||||||||||||||| |||||||||    
T  18938 ttttttactcaactacatggtttggtttggtttgcggctttgattttaccaaccaaaccaaatcaaatcaaa 19009  T

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Target: scaffold0210; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 250 - 321
Target Start/End: Original strand, 26830 - 26901
Alignment:
Q  250 ttttttactcaaccgcatggtttgatttgatttacggtttttattttaccaaccaaaccaaaccaaatcaaa 321  Q
    |||||||||||||  ||||||||| |||| ||| ||| ||| |||||||||||||||||||| |||||||||    
T  26830 ttttttactcaactacatggtttggtttggtttgcggctttgattttaccaaccaaaccaaatcaaatcaaa 26901  T

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Target: scaffold0470 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 613 - 673
Target Start/End: Complemental strand, 6414 - 6355
Alignment:
Q  613 atgttgtgttttggctttttaaacttgattttaatgttggaaacaaaaaattgtatcgtct 673  Q
    |||||||||||| ||||||||| || |||||||| ||||||||||||||||||||| ||||    
T  6414 atgttgtgttttagctttttaa-ctcgattttaaagttggaaacaaaaaattgtattgtct 6355  T

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Target: scaffold0015 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 715 - 753
Target Start/End: Complemental strand, 62471 - 62433
Alignment:
Q  715 ttggtttgatttggttcggattttattttaaaagtcaac 753  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  62471 ttggtttggtttggttcggattttattttaaaagtcaac 62433  T

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Target: scaffold0664 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 299 - 415
Target Start/End: Complemental strand, 6476 - 6358
Alignment:
Q  299 caaccaaaccaaaccaaatcaaaccgcaacataagaaaaaacactaattaa--atatgtcatctgcgccaatactcgtaaaaacccaatgaaaactttca 396  Q
    ||||| ||| |||| ||||||||||| ||||||||| ||||||||||||||  |||||||| ||   ||||||||| || ||||  |||||||||||  |    
T  6476 caaccgaactaaactaaatcaaaccgtaacataaga-aaaacactaattaaacatatgtcacctaaaccaatactcatagaaacttaatgaaaacttcta 6378  T
Q  397 taa-atgacatatattttct 415  Q
    ||| ||||||||| ||||||    
T  6377 taacatgacatattttttct 6358  T

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