View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4785_low_15 (Length: 260)
Name: NF4785_low_15
Description: NF4785
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4785_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 19 - 252
Target Start/End: Complemental strand, 44783362 - 44783131
Alignment:
| Q |
19 |
agcaatatctatcaatattatagtaaattttttgcaagtgtaaactgatacgagaatcttgttaaaaagtaatatcttgttttgtttgggtatcaaattt |
118 |
Q |
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| T |
44783362 |
agcaatatctatcaatattatagtaaattttttgcaagtgtaaactgatacgagaatcttgttaaaaagtaatatcttgttttgtttgggtatcaaattt |
44783263 |
T |
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| Q |
119 |
atgaagaaataagctattttagcttaactatttatatttatcttaaagtctctaacctatgttgaactgacaattgatgtttactttgtttttgggannn |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
44783262 |
atgaagaaataagctattttagcttaactatttatatttatcttaaagtctctaa-ctatgttgaactgacaattgatgtttactttgtttttggga-tt |
44783165 |
T |
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| Q |
219 |
nnnnnncctttgtttgacatttcctccctatgct |
252 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
44783164 |
ttttttcctttgtttgacatttcctccctatgct |
44783131 |
T |
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