View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4786-Insertion-1 (Length: 918)

Name: NF4786-Insertion-1
Description: NF4786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4786-Insertion-1
NF4786-Insertion-1
[»] chr3 (25 HSPs)
chr3 (279-449)||(42575894-42576064)
chr3 (8-155)||(42576168-42576314)
chr3 (800-918)||(42575568-42575687)
chr3 (156-211)||(42576062-42576117)
chr3 (549-590)||(35272128-35272170)
chr3 (549-590)||(8066456-8066497)
chr3 (550-590)||(14207476-14207517)
chr3 (550-590)||(14215224-14215265)
chr3 (874-914)||(52082688-52082728)
chr3 (555-590)||(7149-7184)
chr3 (548-590)||(32795937-32795980)
chr3 (548-590)||(39604173-39604216)
chr3 (555-590)||(41717364-41717399)
chr3 (9-51)||(9179114-9179155)
chr3 (549-590)||(11173551-11173593)
chr3 (549-590)||(19418088-19418130)
chr3 (555-589)||(26021994-26022028)
chr3 (549-590)||(36799499-36799541)
chr3 (555-585)||(37710510-37710540)
chr3 (549-590)||(46473229-46473271)
chr3 (9-55)||(48837090-48837135)
chr3 (556-589)||(12762879-12762912)
chr3 (560-589)||(29525333-29525362)
chr3 (551-588)||(36925838-36925875)
chr3 (549-590)||(41309101-41309142)
[»] chr2 (15 HSPs)
chr2 (549-589)||(18949108-18949148)
chr2 (549-590)||(45515528-45515569)
chr2 (878-914)||(31665931-31665967)
chr2 (559-590)||(6365287-6365318)
chr2 (555-590)||(30856908-30856943)
chr2 (549-590)||(1889248-1889290)
chr2 (549-590)||(3091842-3091884)
chr2 (549-590)||(22390253-22390295)
chr2 (559-589)||(32128232-32128262)
chr2 (549-590)||(34442214-34442256)
chr2 (549-590)||(19695620-19695661)
chr2 (549-589)||(23344917-23344958)
chr2 (560-589)||(25997670-25997699)
chr2 (555-588)||(36763455-36763488)
chr2 (560-589)||(43791731-43791760)
[»] chr1 (15 HSPs)
chr1 (555-590)||(36930691-36930726)
chr1 (549-590)||(5477091-5477133)
chr1 (556-590)||(6841892-6841926)
chr1 (558-590)||(19651509-19651541)
chr1 (555-590)||(4604630-4604665)
chr1 (559-590)||(25995561-25995592)
chr1 (559-590)||(32966368-32966399)
chr1 (555-590)||(42299123-42299158)
chr1 (9-52)||(45443200-45443242)
chr1 (555-590)||(49621462-49621497)
chr1 (555-590)||(50527992-50528027)
chr1 (549-590)||(40610330-40610372)
chr1 (549-590)||(50659120-50659162)
chr1 (559-589)||(52715101-52715131)
chr1 (549-590)||(31703409-31703450)
[»] chr5 (11 HSPs)
chr5 (555-589)||(3770959-3770993)
chr5 (559-590)||(8959261-8959292)
chr5 (559-590)||(11464062-11464093)
chr5 (9-52)||(22196635-22196677)
chr5 (549-590)||(19376060-19376102)
chr5 (549-590)||(34381113-34381155)
chr5 (549-590)||(39595375-39595417)
chr5 (658-691)||(3723114-3723147)
chr5 (555-588)||(7144678-7144711)
chr5 (9-50)||(22196408-22196448)
chr5 (550-590)||(42909820-42909861)
[»] chr4 (22 HSPs)
chr4 (555-589)||(8456005-8456039)
chr4 (549-590)||(49194984-49195026)
chr4 (549-589)||(39449272-39449313)
chr4 (551-590)||(39844188-39844228)
chr4 (555-590)||(3223090-3223125)
chr4 (559-590)||(5234410-5234441)
chr4 (555-590)||(28676089-28676124)
chr4 (559-590)||(32365606-32365637)
chr4 (559-590)||(32901430-32901461)
chr4 (9-52)||(52810934-52810976)
chr4 (549-590)||(9162167-9162209)
chr4 (555-589)||(25241812-25241846)
chr4 (555-589)||(33438147-33438181)
chr4 (555-589)||(33575009-33575043)
chr4 (11-53)||(33912022-33912063)
chr4 (549-590)||(36512943-36512985)
chr4 (560-589)||(839410-839439)
chr4 (549-590)||(16004255-16004296)
chr4 (549-589)||(24772773-24772814)
chr4 (553-586)||(34259931-34259964)
chr4 (549-590)||(48099911-48099952)
chr4 (549-590)||(53384270-53384311)
[»] chr8 (15 HSPs)
chr8 (549-590)||(7596820-7596861)
chr8 (549-590)||(41293650-41293691)
chr8 (559-590)||(5359439-5359470)
chr8 (559-590)||(33817258-33817289)
chr8 (549-590)||(426202-426244)
chr8 (549-590)||(22767231-22767273)
chr8 (549-590)||(23258133-23258175)
chr8 (549-590)||(28927782-28927824)
chr8 (11-53)||(35908657-35908698)
chr8 (559-589)||(36015659-36015689)
chr8 (560-589)||(154392-154421)
chr8 (549-589)||(24503019-24503060)
chr8 (549-590)||(30925583-30925624)
chr8 (560-589)||(42026474-42026503)
chr8 (549-589)||(44068773-44068814)
[»] chr6 (7 HSPs)
chr6 (549-590)||(22491958-22491999)
chr6 (548-590)||(1688300-1688343)
chr6 (559-590)||(3660292-3660323)
chr6 (559-589)||(3339438-3339468)
chr6 (549-590)||(29383658-29383700)
chr6 (556-589)||(2340500-2340533)
chr6 (658-691)||(30622024-30622057)
[»] scaffold0086 (1 HSPs)
scaffold0086 (555-590)||(17265-17300)
[»] chr7 (11 HSPs)
chr7 (559-590)||(10014894-10014925)
chr7 (555-590)||(29034186-29034221)
chr7 (559-590)||(37351929-37351960)
chr7 (9-52)||(39550060-39550102)
chr7 (549-590)||(2790278-2790320)
chr7 (549-590)||(5978680-5978722)
chr7 (549-590)||(33223457-33223499)
chr7 (549-590)||(46651773-46651815)
chr7 (549-590)||(7390703-7390744)
chr7 (555-588)||(12232938-12232971)
chr7 (557-590)||(49014336-49014369)
[»] scaffold0011 (1 HSPs)
scaffold0011 (549-590)||(219592-219634)
[»] scaffold0003 (1 HSPs)
scaffold0003 (556-590)||(337219-337253)
[»] scaffold0115 (1 HSPs)
scaffold0115 (549-590)||(15117-15158)
[»] scaffold0036 (1 HSPs)
scaffold0036 (549-590)||(18105-18146)


Alignment Details
Target: chr3 (Bit Score: 171; Significance: 2e-91; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 279 - 449
Target Start/End: Complemental strand, 42576064 - 42575894
Alignment:
Q  279 taaagtcttgtggtggtgtgagttctgttgctattcggtggggggtgtggggcggttgtccatcttgcccatcctatgggttctacttttctttctttat 378  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42576064 taaagtcttgtggtggtgtgagttctgttgctattcggtggggggtgtggggcggttgtccatcttgcccatcctatgggttctacttttctttctttat 42575965  T
Q  379 tgcagggtggagttgcagcttttcgttggagtgtctctagttccttgggtggttttttgtctgtgttagat 449  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42575964 tgcagggtggagttgcagcttttcgttggagtgtctctagttccttgggtggttttttgtctgtgttagat 42575894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 8 - 155
Target Start/End: Complemental strand, 42576314 - 42576168
Alignment:
Q  8 aatccgatgtgggactaaataaccaccgagtgttggccgctaacaggttgcattagttagtcctcgcattatcagtattttaaaatggatctattaaatt 107  Q
    ||||||||||||||||||||  ||||| ||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  42576314 aatccgatgtgggactaaatc-ccaccaagtgttggccaataacaggttgcattagttagtccttgcattatcagtattttaaaatggatctattaaatt 42576216  T
Q  108 gcaaaatacatatcaagtttttcccaatatatgaatatgttatcaaat 155  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42576215 gcaaaatgcatatcaagtttttcccaatatatgaatatgttatcaaat 42576168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 800 - 918
Target Start/End: Complemental strand, 42575687 - 42575568
Alignment:
Q  800 tgtccatgtaattgccacaaaacagtaaactatccaagaacaagagaagctcaaat-aaattacaaaatatatacttattttaaaggagggatcaaaagt 898  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||| |||||||||||    
T  42575687 tgtccatgtaattgccacaaaacagtaaactatccaagaacaagagaagctcagattaaattacaaaatatatacttaatttaaaggaaggatcaaaagt 42575588  T
Q  899 gaaaatgaaaatttttggga 918  Q
    ||||||||||||||||||||    
T  42575587 gaaaatgaaaatttttggga 42575568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 42576117 - 42576062
Alignment:
Q  156 cctcgtcttgcatttagtgaacagggtgaagtttttagtctgaaagtaattcctaa 211  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42576117 cctcgtcttgcatttagtgaacagggtgaagtttttagcctgaaagtaattcctaa 42576062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 590
Target Start/End: Complemental strand, 35272170 - 35272128
Alignment:
Q  549 tgacaacttcttttt-ctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  35272170 tgacaacttcttttttctctctttttattggtcaaaaacaatg 35272128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 590
Target Start/End: Complemental strand, 8066497 - 8066456
Alignment:
Q  549 tgacaacttctttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  8066497 tgacaacttatttttctctcttttcattggtcaaaaacaatg 8066456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 550 - 590
Target Start/End: Complemental strand, 14207517 - 14207476
Alignment:
Q  550 gacaacttcttttt-ctctctttttattggtcaaaaacaatg 590  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  14207517 gacaacttcttttttctctctttttattggtcaaaaacaatg 14207476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 550 - 590
Target Start/End: Complemental strand, 14215265 - 14215224
Alignment:
Q  550 gacaacttcttttt-ctctctttttattggtcaaaaacaatg 590  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  14215265 gacaacttcttttttctctctttttattggtcaaaaacaatg 14215224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 874 - 914
Target Start/End: Complemental strand, 52082728 - 52082688
Alignment:
Q  874 ttattttaaaggagggatcaaaagtgaaaatgaaaattttt 914  Q
    |||||||||| ||||||| ||||||||||||||||||||||    
T  52082728 ttattttaaacgagggattaaaagtgaaaatgaaaattttt 52082688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 590
Target Start/End: Original strand, 7149 - 7184
Alignment:
Q  555 cttctttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||| ||||||||||||||||||||||    
T  7149 cttctttttctctttttttattggtcaaaaacaatg 7184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 548 - 590
Target Start/End: Complemental strand, 32795980 - 32795937
Alignment:
Q  548 ttgacaactt-ctttttctctctttttattggtcaaaaacaatg 590  Q
    |||||||||| | |||||||||||||||||||||||||||||||    
T  32795980 ttgacaactttcattttctctctttttattggtcaaaaacaatg 32795937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 548 - 590
Target Start/End: Original strand, 39604173 - 39604216
Alignment:
Q  548 ttgacaacttctttt-tctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||| |||||||||| |||||||||||||||||    
T  39604173 ttgacaacttcttttttctctcttttcattggtcaaaaacaatg 39604216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 590
Target Start/End: Complemental strand, 41717399 - 41717364
Alignment:
Q  555 cttctttttctctctttttattggtcaaaaacaatg 590  Q
    |||||||||||||||||| |||||||||||||||||    
T  41717399 cttctttttctctcttttcattggtcaaaaacaatg 41717364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 9179155 - 9179114
Alignment:
Q  9 atccgatgtgggactaaataaccaccgagtgttggccgctaac 51  Q
    |||||||||||||||||||  ||||||||||||||||||||||    
T  9179155 atccgatgtgggactaaatc-ccaccgagtgttggccgctaac 9179114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 590
Target Start/End: Complemental strand, 11173593 - 11173551
Alignment:
Q  549 tgacaacttcttttt-ctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||| ||||||||| |||||||||||||||||    
T  11173593 tgacaacttcttttttctctcttttcattggtcaaaaacaatg 11173551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 590
Target Start/End: Original strand, 19418088 - 19418130
Alignment:
Q  549 tgacaacttctttt-tctctctttttattggtcaaaaacaatg 590  Q
    |||||||||||||| |||||||||| |||||||||||||||||    
T  19418088 tgacaacttcttttctctctcttttcattggtcaaaaacaatg 19418130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 555 - 589
Target Start/End: Original strand, 26021994 - 26022028
Alignment:
Q  555 cttctttttctctctttttattggtcaaaaacaat 589  Q
    |||||||||| ||||||||||||||||||||||||    
T  26021994 cttctttttcactctttttattggtcaaaaacaat 26022028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 590
Target Start/End: Complemental strand, 36799541 - 36799499
Alignment:
Q  549 tgacaacttc-tttttctctctttttattggtcaaaaacaatg 590  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  36799541 tgacaacttcatttttctctcttttcattggtcaaaaacaatg 36799499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 555 - 585
Target Start/End: Complemental strand, 37710540 - 37710510
Alignment:
Q  555 cttctttttctctctttttattggtcaaaaa 585  Q
    |||||||||||||||||||||||||||||||    
T  37710540 cttctttttctctctttttattggtcaaaaa 37710510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 590
Target Start/End: Complemental strand, 46473271 - 46473229
Alignment:
Q  549 tgacaacttcttttt-ctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||| ||||||||| |||||||||||||||||    
T  46473271 tgacaacttcttttttctctcttttcattggtcaaaaacaatg 46473229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 48837090 - 48837135
Alignment:
Q  9 atccgatgtgggactaaataaccaccgagtgttggccgctaacaggt 55  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||    
T  48837090 atccgatgtgggactaaatc-ccaccgagtgttggcagctaacaggt 48837135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 556 - 589
Target Start/End: Original strand, 12762879 - 12762912
Alignment:
Q  556 ttctttttctctctttttattggtcaaaaacaat 589  Q
    |||||||||||||||||||||||| |||||||||    
T  12762879 ttctttttctctctttttattggtaaaaaacaat 12762912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 560 - 589
Target Start/End: Complemental strand, 29525362 - 29525333
Alignment:
Q  560 ttttctctctttttattggtcaaaaacaat 589  Q
    ||||||||||||||||||||||||||||||    
T  29525362 ttttctctctttttattggtcaaaaacaat 29525333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 551 - 588
Target Start/End: Complemental strand, 36925875 - 36925838
Alignment:
Q  551 acaacttctttttctctctttttattggtcaaaaacaa 588  Q
    |||||||||||| || ||||||||||||||||||||||    
T  36925875 acaacttcttttcctttctttttattggtcaaaaacaa 36925838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 590
Target Start/End: Complemental strand, 41309142 - 41309101
Alignment:
Q  549 tgacaacttctttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||||| |||||| |||||| ||||||||||    
T  41309142 tgacaacttctttttctatcttttcattggttaaaaacaatg 41309101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000002; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 549 - 589
Target Start/End: Complemental strand, 18949148 - 18949108
Alignment:
Q  549 tgacaacttctttttctctctttttattggtcaaaaacaat 589  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  18949148 tgacaacttctttttctttctttttattggtcaaaaacaat 18949108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 590
Target Start/End: Original strand, 45515528 - 45515569
Alignment:
Q  549 tgacaacttctttttctctctttttattggtcaaaaacaatg 590  Q
    |||||||||||||||||||||||| |||||| ||||||||||    
T  45515528 tgacaacttctttttctctcttttcattggttaaaaacaatg 45515569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 878 - 914
Target Start/End: Complemental strand, 31665967 - 31665931
Alignment:
Q  878 tttaaaggagggatcaaaagtgaaaatgaaaattttt 914  Q
    |||||||||||||||||||||||| ||||||||||||    
T  31665967 tttaaaggagggatcaaaagtgaagatgaaaattttt 31665931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 590
Target Start/End: Complemental strand, 6365318 - 6365287
Alignment:
Q  559 tttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||||||||||||||||||||    
T  6365318 tttttctctctttttattggtcaaaaacaatg 6365287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 590
Target Start/End: Complemental strand, 30856943 - 30856908
Alignment:
Q  555 cttctttttctctctttttattggtcaaaaacaatg 590  Q
    |||||||||||||||||| |||||||||||||||||    
T  30856943 cttctttttctctcttttcattggtcaaaaacaatg 30856908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 590
Target Start/End: Complemental strand, 1889290 - 1889248
Alignment:
Q  549 tgacaacttcttttt-ctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||| ||||||||| |||||||||||||||||    
T  1889290 tgacaacttcttttttctctcttttcattggtcaaaaacaatg 1889248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 590
Target Start/End: Complemental strand, 3091884 - 3091842
Alignment:
Q  549 tgacaacttcttttt-ctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||| ||||||||| |||||||||||||||||    
T  3091884 tgacaacttcttttttctctcttttcattggtcaaaaacaatg 3091842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 590
Target Start/End: Complemental strand, 22390295 - 22390253
Alignment:
Q  549 tgacaacttctttt-tctctctttttattggtcaaaaacaatg 590  Q
    |||||||||||||| |||||||||| |||||||||||||||||    
T  22390295 tgacaacttcttttctctctcttttcattggtcaaaaacaatg 22390253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 559 - 589
Target Start/End: Complemental strand, 32128262 - 32128232
Alignment:
Q  559 tttttctctctttttattggtcaaaaacaat 589  Q
    |||||||||||||||||||||||||||||||    
T  32128262 tttttctctctttttattggtcaaaaacaat 32128232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 590
Target Start/End: Complemental strand, 34442256 - 34442214
Alignment:
Q  549 tgacaacttctttt-tctctctttttattggtcaaaaacaatg 590  Q
    ||||||| |||||| ||||||||||||||||||||||||||||    
T  34442256 tgacaacctcttttctctctctttttattggtcaaaaacaatg 34442214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 590
Target Start/End: Original strand, 19695620 - 19695661
Alignment:
Q  549 tgacaacttctttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||| |||| ||||||||| |||||||||||||||||    
T  19695620 tgacaactttttttcctctcttttcattggtcaaaaacaatg 19695661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 589
Target Start/End: Original strand, 23344917 - 23344958
Alignment:
Q  549 tgacaacttctttt-tctctctttttattggtcaaaaacaat 589  Q
    |||||||||||||| |||||||||| ||||||||||||||||    
T  23344917 tgacaacttcttttctctctcttttcattggtcaaaaacaat 23344958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 560 - 589
Target Start/End: Original strand, 25997670 - 25997699
Alignment:
Q  560 ttttctctctttttattggtcaaaaacaat 589  Q
    ||||||||||||||||||||||||||||||    
T  25997670 ttttctctctttttattggtcaaaaacaat 25997699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 555 - 588
Target Start/End: Original strand, 36763455 - 36763488
Alignment:
Q  555 cttctttttctctctttttattggtcaaaaacaa 588  Q
    |||||||||||||||||| |||||||||||||||    
T  36763455 cttctttttctctcttttcattggtcaaaaacaa 36763488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 560 - 589
Target Start/End: Original strand, 43791731 - 43791760
Alignment:
Q  560 ttttctctctttttattggtcaaaaacaat 589  Q
    ||||||||||||||||||||||||||||||    
T  43791731 ttttctctctttttattggtcaaaaacaat 43791760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000009; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 555 - 590
Target Start/End: Original strand, 36930691 - 36930726
Alignment:
Q  555 cttctttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||||||||||||||||||||||||    
T  36930691 cttctttttctctctttttattggtcaaaaacaatg 36930726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 590
Target Start/End: Original strand, 5477091 - 5477133
Alignment:
Q  549 tgacaacttctttt-tctctctttttattggtcaaaaacaatg 590  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  5477091 tgacaacttcttttttctctctttttattggtcaaaaacaatg 5477133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 556 - 590
Target Start/End: Complemental strand, 6841926 - 6841892
Alignment:
Q  556 ttctttttctctctttttattggtcaaaaacaatg 590  Q
    |||||||||||||||||||||||||||||||||||    
T  6841926 ttctttttctctctttttattggtcaaaaacaatg 6841892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 558 - 590
Target Start/End: Complemental strand, 19651541 - 19651509
Alignment:
Q  558 ctttttctctctttttattggtcaaaaacaatg 590  Q
    |||||||||||||||||||||||||||||||||    
T  19651541 ctttttctctctttttattggtcaaaaacaatg 19651509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 590
Target Start/End: Complemental strand, 4604665 - 4604630
Alignment:
Q  555 cttctttttctctctttttattggtcaaaaacaatg 590  Q
    |||||||||||||||||| |||||||||||||||||    
T  4604665 cttctttttctctcttttcattggtcaaaaacaatg 4604630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 590
Target Start/End: Complemental strand, 25995592 - 25995561
Alignment:
Q  559 tttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||||||||||||||||||||    
T  25995592 tttttctctctttttattggtcaaaaacaatg 25995561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 590
Target Start/End: Complemental strand, 32966399 - 32966368
Alignment:
Q  559 tttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||||||||||||||||||||    
T  32966399 tttttctctctttttattggtcaaaaacaatg 32966368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 590
Target Start/End: Original strand, 42299123 - 42299158
Alignment:
Q  555 cttctttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||||||||||||||||||| ||||    
T  42299123 cttctttttctctctttttattggtcaaaaataatg 42299158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 45443242 - 45443200
Alignment:
Q  9 atccgatgtgggactaaataaccaccgagtgttggccgctaaca 52  Q
    |||||||||||||||||||  |||||||||||||||||||||||    
T  45443242 atccgatgtgggactaaatc-ccaccgagtgttggccgctaaca 45443200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 590
Target Start/End: Complemental strand, 49621497 - 49621462
Alignment:
Q  555 cttctttttctctctttttattggtcaaaaacaatg 590  Q
    |||| |||||||||||||||||||||||||||||||    
T  49621497 cttcattttctctctttttattggtcaaaaacaatg 49621462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 590
Target Start/End: Original strand, 50527992 - 50528027
Alignment:
Q  555 cttctttttctctctttttattggtcaaaaacaatg 590  Q
    |||||||||||||||||| |||||||||||||||||    
T  50527992 cttctttttctctcttttcattggtcaaaaacaatg 50528027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 590
Target Start/End: Complemental strand, 40610372 - 40610330
Alignment:
Q  549 tgacaacttctttt-tctctctttttattggtcaaaaacaatg 590  Q
    |||||||||||||| |||||||||| |||||||||||||||||    
T  40610372 tgacaacttcttttctctctcttttcattggtcaaaaacaatg 40610330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 590
Target Start/End: Original strand, 50659120 - 50659162
Alignment:
Q  549 tgacaacttctttt-tctctctttttattggtcaaaaacaatg 590  Q
    |||||||||||||| |||||||||| |||||||||||||||||    
T  50659120 tgacaacttcttttctctctcttttcattggtcaaaaacaatg 50659162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 559 - 589
Target Start/End: Complemental strand, 52715131 - 52715101
Alignment:
Q  559 tttttctctctttttattggtcaaaaacaat 589  Q
    |||||||||||||||||||||||||||||||    
T  52715131 tttttctctctttttattggtcaaaaacaat 52715101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 590
Target Start/End: Original strand, 31703409 - 31703450
Alignment:
Q  549 tgacaacttctttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||| |||||||||||||| |||||| ||||||||||    
T  31703409 tgacaacttttttttctctcttttcattggttaaaaacaatg 31703450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000003; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 555 - 589
Target Start/End: Original strand, 3770959 - 3770993
Alignment:
Q  555 cttctttttctctctttttattggtcaaaaacaat 589  Q
    |||||||||||||||||||||||||||||||||||    
T  3770959 cttctttttctctctttttattggtcaaaaacaat 3770993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 590
Target Start/End: Complemental strand, 8959292 - 8959261
Alignment:
Q  559 tttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||||||||||||||||||||    
T  8959292 tttttctctctttttattggtcaaaaacaatg 8959261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 590
Target Start/End: Original strand, 11464062 - 11464093
Alignment:
Q  559 tttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||||||||||||||||||||    
T  11464062 tttttctctctttttattggtcaaaaacaatg 11464093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 22196635 - 22196677
Alignment:
Q  9 atccgatgtgggactaaataaccaccgagtgttggccgctaaca 52  Q
    |||||||||||||||||||  |||||||||||||||||||||||    
T  22196635 atccgatgtgggactaaatc-ccaccgagtgttggccgctaaca 22196677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 590
Target Start/End: Original strand, 19376060 - 19376102
Alignment:
Q  549 tgacaacttctttt-tctctctttttattggtcaaaaacaatg 590  Q
    |||||||||||||| |||||||||| |||||||||||||||||    
T  19376060 tgacaacttcttttttctctcttttcattggtcaaaaacaatg 19376102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 590
Target Start/End: Complemental strand, 34381155 - 34381113
Alignment:
Q  549 tgacaacttc-tttttctctctttttattggtcaaaaacaatg 590  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  34381155 tgacaacttcgtttttctctcttttcattggtcaaaaacaatg 34381113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 590
Target Start/End: Complemental strand, 39595417 - 39595375
Alignment:
Q  549 tgacaacttcttttt-ctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||| ||||||||| |||||||||||||||||    
T  39595417 tgacaacttcttttttctctcttttcattggtcaaaaacaatg 39595375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 691
Target Start/End: Original strand, 3723114 - 3723147
Alignment:
Q  658 ttgtaagaaagtagttgtacaaatatcatttctc 691  Q
    |||||| |||||||||||||||||||||||||||    
T  3723114 ttgtaataaagtagttgtacaaatatcatttctc 3723147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 555 - 588
Target Start/End: Complemental strand, 7144711 - 7144678
Alignment:
Q  555 cttctttttctctctttttattggtcaaaaacaa 588  Q
    |||||||||||||||||||||||||||| |||||    
T  7144711 cttctttttctctctttttattggtcaataacaa 7144678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 22196408 - 22196448
Alignment:
Q  9 atccgatgtgggactaaataaccaccgagtgttggccgctaa 50  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  22196408 atccgatgtgggactaaatc-ccaccgagtgttggccgctaa 22196448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 550 - 590
Target Start/End: Complemental strand, 42909861 - 42909820
Alignment:
Q  550 gacaacttctttt-tctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  42909861 gacaacttcttttctctctcttttcattggtcaaaaacaatg 42909820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000003; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 555 - 589
Target Start/End: Complemental strand, 8456039 - 8456005
Alignment:
Q  555 cttctttttctctctttttattggtcaaaaacaat 589  Q
    |||||||||||||||||||||||||||||||||||    
T  8456039 cttctttttctctctttttattggtcaaaaacaat 8456005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 590
Target Start/End: Complemental strand, 49195026 - 49194984
Alignment:
Q  549 tgacaacttctttt-tctctctttttattggtcaaaaacaatg 590  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  49195026 tgacaacttcttttctctctctttttattggtcaaaaacaatg 49194984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 589
Target Start/End: Complemental strand, 39449313 - 39449272
Alignment:
Q  549 tgacaact-tctttttctctctttttattggtcaaaaacaat 589  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  39449313 tgacaactctctttttctctctttttattggtcaaaaacaat 39449272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 551 - 590
Target Start/End: Original strand, 39844188 - 39844228
Alignment:
Q  551 acaacttctttt-tctctctttttattggtcaaaaacaatg 590  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  39844188 acaacttcttttttctctctttttattggtcaaaaacaatg 39844228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 590
Target Start/End: Complemental strand, 3223125 - 3223090
Alignment:
Q  555 cttctttttctctctttttattggtcaaaaacaatg 590  Q
    |||||||||||||||| |||||||||||||||||||    
T  3223125 cttctttttctctcttcttattggtcaaaaacaatg 3223090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 590
Target Start/End: Original strand, 5234410 - 5234441
Alignment:
Q  559 tttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||||||||||||||||||||    
T  5234410 tttttctctctttttattggtcaaaaacaatg 5234441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 590
Target Start/End: Original strand, 28676089 - 28676124
Alignment:
Q  555 cttctttttctctctttttattggtcaaaaacaatg 590  Q
    |||||||||||||||||| |||||||||||||||||    
T  28676089 cttctttttctctcttttcattggtcaaaaacaatg 28676124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 590
Target Start/End: Original strand, 32365606 - 32365637
Alignment:
Q  559 tttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||||||||||||||||||||    
T  32365606 tttttctctctttttattggtcaaaaacaatg 32365637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 590
Target Start/End: Complemental strand, 32901461 - 32901430
Alignment:
Q  559 tttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||||||||||||||||||||    
T  32901461 tttttctctctttttattggtcaaaaacaatg 32901430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 52810934 - 52810976
Alignment:
Q  9 atccgatgtgggactaaataaccaccgagtgttggccgctaaca 52  Q
    |||||||||||||||||||  |||||||||||||||||||||||    
T  52810934 atccgatgtgggactaaatc-ccaccgagtgttggccgctaaca 52810976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 590
Target Start/End: Complemental strand, 9162209 - 9162167
Alignment:
Q  549 tgacaacttcttttt-ctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||| ||||||||| |||||||||||||||||    
T  9162209 tgacaacttcttttttctctcttttcattggtcaaaaacaatg 9162167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 555 - 589
Target Start/End: Original strand, 25241812 - 25241846
Alignment:
Q  555 cttctttttctctctttttattggtcaaaaacaat 589  Q
    |||||||||||||||||||||| ||||||||||||    
T  25241812 cttctttttctctctttttatttgtcaaaaacaat 25241846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 555 - 589
Target Start/End: Complemental strand, 33438181 - 33438147
Alignment:
Q  555 cttctttttctctctttttattggtcaaaaacaat 589  Q
    |||| ||||||||||||||||||||||||||||||    
T  33438181 cttcattttctctctttttattggtcaaaaacaat 33438147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 555 - 589
Target Start/End: Original strand, 33575009 - 33575043
Alignment:
Q  555 cttctttttctctctttttattggtcaaaaacaat 589  Q
    ||||||||||||| |||||||||||||||||||||    
T  33575009 cttctttttctctttttttattggtcaaaaacaat 33575043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 33912063 - 33912022
Alignment:
Q  11 ccgatgtgggactaaataaccaccgagtgttggccgctaacag 53  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  33912063 ccgatgtgggactaaatc-ccaccgagtgttggccgctaacag 33912022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 590
Target Start/End: Complemental strand, 36512985 - 36512943
Alignment:
Q  549 tgacaacttctttt-tctctctttttattggtcaaaaacaatg 590  Q
    |||||||||||||| ||||||||||||||||| ||||||||||    
T  36512985 tgacaacttcttttctctctctttttattggtaaaaaacaatg 36512943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 560 - 589
Target Start/End: Original strand, 839410 - 839439
Alignment:
Q  560 ttttctctctttttattggtcaaaaacaat 589  Q
    ||||||||||||||||||||||||||||||    
T  839410 ttttctctctttttattggtcaaaaacaat 839439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 590
Target Start/End: Original strand, 16004255 - 16004296
Alignment:
Q  549 tgacaacttctttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||| |||||||||||||| |||||||||||| ||||    
T  16004255 tgacaacttttttttctctcttttcattggtcaaaaataatg 16004296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 589
Target Start/End: Complemental strand, 24772814 - 24772773
Alignment:
Q  549 tgacaacttctttt-tctctctttttattggtcaaaaacaat 589  Q
    |||||| ||||||| |||||||||||||||||||||||||||    
T  24772814 tgacaatttcttttctctctctttttattggtcaaaaacaat 24772773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 553 - 586
Target Start/End: Complemental strand, 34259964 - 34259931
Alignment:
Q  553 aacttctttttctctctttttattggtcaaaaac 586  Q
    |||||||||||||||||| |||||||||||||||    
T  34259964 aacttctttttctctcttcttattggtcaaaaac 34259931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 590
Target Start/End: Complemental strand, 48099952 - 48099911
Alignment:
Q  549 tgacaacttctttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||| ||||| ||||||||||||||| ||||||||||    
T  48099952 tgacaacttttttttttctctttttattggttaaaaacaatg 48099911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 590
Target Start/End: Original strand, 53384270 - 53384311
Alignment:
Q  549 tgacaacttctttttctctctttttattggtcaaaaacaatg 590  Q
    |||||| || |||||||||||| |||||||||||||||||||    
T  53384270 tgacaatttgtttttctctcttcttattggtcaaaaacaatg 53384311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.000000001; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 590
Target Start/End: Original strand, 7596820 - 7596861
Alignment:
Q  549 tgacaacttctttttctctctttttattggtcaaaaacaatg 590  Q
    |||||| |||||||||| ||||||||||||||||||||||||    
T  7596820 tgacaatttctttttctatctttttattggtcaaaaacaatg 7596861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 590
Target Start/End: Original strand, 41293650 - 41293691
Alignment:
Q  549 tgacaacttctttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||| |||||||||||| |||||||||||||||||||    
T  41293650 tgacaacttgtttttctctcttcttattggtcaaaaacaatg 41293691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 590
Target Start/End: Complemental strand, 5359470 - 5359439
Alignment:
Q  559 tttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||||||||||||||||||||    
T  5359470 tttttctctctttttattggtcaaaaacaatg 5359439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 590
Target Start/End: Complemental strand, 33817289 - 33817258
Alignment:
Q  559 tttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||||||||||||||||||||    
T  33817289 tttttctctctttttattggtcaaaaacaatg 33817258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 590
Target Start/End: Complemental strand, 426244 - 426202
Alignment:
Q  549 tgacaacttcttttt-ctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||| ||||||||| |||||||||||||||||    
T  426244 tgacaacttcttttttctctcttttcattggtcaaaaacaatg 426202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 590
Target Start/End: Complemental strand, 22767273 - 22767231
Alignment:
Q  549 tgacaacttcttttt-ctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||| ||||||||| |||||||||||||||||    
T  22767273 tgacaacttcttttttctctcttttcattggtcaaaaacaatg 22767231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 590
Target Start/End: Complemental strand, 23258175 - 23258133
Alignment:
Q  549 tgacaacttcttttt-ctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||| ||||||||| |||||||||||||||||    
T  23258175 tgacaacttcttttttctctcttttcattggtcaaaaacaatg 23258133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 590
Target Start/End: Complemental strand, 28927824 - 28927782
Alignment:
Q  549 tgacaacttctttt-tctctctttttattggtcaaaaacaatg 590  Q
    |||||||||||||| |||||||||| |||||||||||||||||    
T  28927824 tgacaacttcttttctctctcttttcattggtcaaaaacaatg 28927782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 35908698 - 35908657
Alignment:
Q  11 ccgatgtgggactaaataaccaccgagtgttggccgctaacag 53  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  35908698 ccgatgtgggactaaatc-ccaccgagtgttggccgctaacag 35908657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 559 - 589
Target Start/End: Complemental strand, 36015689 - 36015659
Alignment:
Q  559 tttttctctctttttattggtcaaaaacaat 589  Q
    |||||||||||||||||||||||||||||||    
T  36015689 tttttctctctttttattggtcaaaaacaat 36015659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 560 - 589
Target Start/End: Complemental strand, 154421 - 154392
Alignment:
Q  560 ttttctctctttttattggtcaaaaacaat 589  Q
    ||||||||||||||||||||||||||||||    
T  154421 ttttctctctttttattggtcaaaaacaat 154392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 589
Target Start/End: Complemental strand, 24503060 - 24503019
Alignment:
Q  549 tgacaacttc-tttttctctctttttattggtcaaaaacaat 589  Q
    |||||||||| |||||||||||||| ||||||||||||||||    
T  24503060 tgacaacttcatttttctctcttttcattggtcaaaaacaat 24503019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 590
Target Start/End: Original strand, 30925583 - 30925624
Alignment:
Q  549 tgacaacttctttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||| |||||||||||||| |||||| ||||||||||    
T  30925583 tgacaacttttttttctctcttttcattggttaaaaacaatg 30925624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 560 - 589
Target Start/End: Complemental strand, 42026503 - 42026474
Alignment:
Q  560 ttttctctctttttattggtcaaaaacaat 589  Q
    ||||||||||||||||||||||||||||||    
T  42026503 ttttctctctttttattggtcaaaaacaat 42026474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 589
Target Start/End: Complemental strand, 44068814 - 44068773
Alignment:
Q  549 tgacaacttc-tttttctctctttttattggtcaaaaacaat 589  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  44068814 tgacaacttcctttttctctctttctattggtcaaaaacaat 44068773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.000000001; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 590
Target Start/End: Original strand, 22491958 - 22491999
Alignment:
Q  549 tgacaacttctttttctctctttttattggtcaaaaacaatg 590  Q
    |||||||||||||||||||||||| ||||||||||| |||||    
T  22491958 tgacaacttctttttctctcttttgattggtcaaaagcaatg 22491999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 548 - 590
Target Start/End: Original strand, 1688300 - 1688343
Alignment:
Q  548 ttgacaacttctttttc-tctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||    
T  1688300 ttgacaacttctttttcctctctttttattggttaaaaacaatg 1688343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 590
Target Start/End: Original strand, 3660292 - 3660323
Alignment:
Q  559 tttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||||||||||||||||||||    
T  3660292 tttttctctctttttattggtcaaaaacaatg 3660323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 559 - 589
Target Start/End: Original strand, 3339438 - 3339468
Alignment:
Q  559 tttttctctctttttattggtcaaaaacaat 589  Q
    |||||||||||||||||||||||||||||||    
T  3339438 tttttctctctttttattggtcaaaaacaat 3339468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 590
Target Start/End: Complemental strand, 29383700 - 29383658
Alignment:
Q  549 tgacaacttcttttt-ctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||| ||||||||| |||||||||||||||||    
T  29383700 tgacaacttcttttttctctcttttcattggtcaaaaacaatg 29383658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 556 - 589
Target Start/End: Complemental strand, 2340533 - 2340500
Alignment:
Q  556 ttctttttctctctttttattggtcaaaaacaat 589  Q
    ||||||||||||||||||||||||| ||||||||    
T  2340533 ttctttttctctctttttattggtcgaaaacaat 2340500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 691
Target Start/End: Complemental strand, 30622057 - 30622024
Alignment:
Q  658 ttgtaagaaagtagttgtacaaatatcatttctc 691  Q
    |||||| |||||||||||||||||||||||||||    
T  30622057 ttgtaataaagtagttgtacaaatatcatttctc 30622024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 590
Target Start/End: Original strand, 17265 - 17300
Alignment:
Q  555 cttctttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||| ||||||||||||||||||||||    
T  17265 cttctttttctctttttttattggtcaaaaacaatg 17300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 32; Significance: 0.00000002; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 590
Target Start/End: Original strand, 10014894 - 10014925
Alignment:
Q  559 tttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||||||||||||||||||||    
T  10014894 tttttctctctttttattggtcaaaaacaatg 10014925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 590
Target Start/End: Complemental strand, 29034221 - 29034186
Alignment:
Q  555 cttctttttctctctttttattggtcaaaaacaatg 590  Q
    |||||||||||||||||| |||||||||||||||||    
T  29034221 cttctttttctctcttttcattggtcaaaaacaatg 29034186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 590
Target Start/End: Original strand, 37351929 - 37351960
Alignment:
Q  559 tttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||||||||||||||||||||    
T  37351929 tttttctctctttttattggtcaaaaacaatg 37351960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 39550060 - 39550102
Alignment:
Q  9 atccgatgtgggactaaataaccaccgagtgttggccgctaaca 52  Q
    |||||||||||||||||||  |||||||||||||||||||||||    
T  39550060 atccgatgtgggactaaatc-ccaccgagtgttggccgctaaca 39550102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 590
Target Start/End: Complemental strand, 2790320 - 2790278
Alignment:
Q  549 tgacaacttctttt-tctctctttttattggtcaaaaacaatg 590  Q
    |||||||||||||| |||||||||| |||||||||||||||||    
T  2790320 tgacaacttcttttctctctcttttcattggtcaaaaacaatg 2790278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 590
Target Start/End: Complemental strand, 5978722 - 5978680
Alignment:
Q  549 tgacaacttct-ttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  5978722 tgacaacttctattttctctcttttcattggtcaaaaacaatg 5978680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 590
Target Start/End: Original strand, 33223457 - 33223499
Alignment:
Q  549 tgacaacttctttttc-tctctttttattggtcaaaaacaatg 590  Q
    |||||||||||||||| |||||||||||||| |||||||||||    
T  33223457 tgacaacttctttttcctctctttttattggccaaaaacaatg 33223499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 590
Target Start/End: Complemental strand, 46651815 - 46651773
Alignment:
Q  549 tgacaacttct-ttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  46651815 tgacaacttctattttctctcttttcattggtcaaaaacaatg 46651773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 590
Target Start/End: Original strand, 7390703 - 7390744
Alignment:
Q  549 tgacaacttctttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||||||||||||||||| | ||||| ||||    
T  7390703 tgacaacttctttttctctctttttattgattaaaaataatg 7390744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 555 - 588
Target Start/End: Original strand, 12232938 - 12232971
Alignment:
Q  555 cttctttttctctctttttattggtcaaaaacaa 588  Q
    ||||||||||||||| ||||||||||||||||||    
T  12232938 cttctttttctctctatttattggtcaaaaacaa 12232971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 557 - 590
Target Start/End: Original strand, 49014336 - 49014369
Alignment:
Q  557 tctttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||| ||||||||||||||||||||||    
T  49014336 tctttttctctatttttattggtcaaaaacaatg 49014369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 590
Target Start/End: Original strand, 219592 - 219634
Alignment:
Q  549 tgacaacttctttt-tctctctttttattggtcaaaaacaatg 590  Q
    |||||||||||||| |||||||||| |||||||||||||||||    
T  219592 tgacaacttcttttctctctcttttcattggtcaaaaacaatg 219634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 556 - 590
Target Start/End: Complemental strand, 337253 - 337219
Alignment:
Q  556 ttctttttctctctttttattggtcaaaaacaatg 590  Q
    |||||||||||| ||||||||||||||||||||||    
T  337253 ttctttttctctttttttattggtcaaaaacaatg 337219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 590
Target Start/End: Original strand, 15117 - 15158
Alignment:
Q  549 tgacaacttctttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||||||||||||| |||| |||||| ||||||||||    
T  15117 tgacaacttctttttctcttttttcattggttaaaaacaatg 15158  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 590
Target Start/End: Complemental strand, 18146 - 18105
Alignment:
Q  549 tgacaacttctttttctctctttttattggtcaaaaacaatg 590  Q
    ||||||||| |||||||||||||| |||||| ||||||||||    
T  18146 tgacaacttttttttctctcttttcattggttaaaaacaatg 18105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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