View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4786-Insertion-6 (Length: 430)

Name: NF4786-Insertion-6
Description: NF4786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4786-Insertion-6
NF4786-Insertion-6
[»] chr3 (53 HSPs)
chr3 (236-430)||(40660118-40660312)
chr3 (7-204)||(40660332-40660544)
chr3 (102-204)||(54261225-54261328)
chr3 (102-163)||(49198350-49198411)
chr3 (102-184)||(30045820-30045903)
chr3 (102-204)||(35923628-35923731)
chr3 (102-204)||(48342019-48342122)
chr3 (102-160)||(15320185-15320243)
chr3 (101-160)||(10855382-10855441)
chr3 (102-160)||(8164552-8164610)
chr3 (102-160)||(47749155-47749212)
chr3 (102-163)||(3755569-3755630)
chr3 (102-163)||(6462411-6462472)
chr3 (102-163)||(28242277-28242338)
chr3 (102-163)||(29135912-29135973)
chr3 (102-163)||(33251661-33251722)
chr3 (102-163)||(35315955-35316016)
chr3 (102-163)||(45877453-45877514)
chr3 (101-204)||(7328842-7328945)
chr3 (103-163)||(26043812-26043872)
chr3 (102-204)||(3136699-3136801)
chr3 (102-204)||(3507538-3507641)
chr3 (102-204)||(8362576-8362679)
chr3 (102-204)||(13893925-13894028)
chr3 (102-160)||(30767297-30767355)
chr3 (102-160)||(31072877-31072935)
chr3 (102-187)||(45402373-45402459)
chr3 (102-160)||(52364850-52364908)
chr3 (102-163)||(26207848-26207909)
chr3 (102-163)||(29127918-29127979)
chr3 (102-163)||(42412821-42412882)
chr3 (102-198)||(49082823-49082920)
chr3 (129-204)||(23511593-23511669)
chr3 (123-163)||(39849091-39849131)
chr3 (121-204)||(41219610-41219694)
chr3 (125-160)||(10040578-10040613)
chr3 (98-204)||(20948066-20948173)
chr3 (102-200)||(34662328-34662427)
chr3 (100-163)||(41630559-41630622)
chr3 (102-204)||(51060286-51060389)
chr3 (102-204)||(53649726-53649829)
chr3 (125-160)||(55069729-55069764)
chr3 (102-160)||(7650226-7650284)
chr3 (102-175)||(11687143-11687217)
chr3 (102-160)||(15795544-15795601)
chr3 (127-161)||(41223087-41223121)
chr3 (102-163)||(32873596-32873657)
chr3 (102-163)||(33688950-33689011)
chr3 (102-163)||(47219143-47219204)
chr3 (102-163)||(47471831-47471891)
chr3 (102-155)||(51683009-51683062)
chr3 (108-160)||(50405653-50405705)
chr3 (108-148)||(50682482-50682522)
[»] chr7 (47 HSPs)
chr7 (102-204)||(43861976-43862079)
chr7 (102-204)||(18785671-18785774)
chr7 (102-163)||(4195248-4195309)
chr7 (102-204)||(5039422-5039525)
chr7 (102-204)||(27875092-27875195)
chr7 (102-160)||(21190829-21190887)
chr7 (103-204)||(39474943-39475045)
chr7 (102-163)||(38578913-38578974)
chr7 (102-158)||(17748433-17748489)
chr7 (101-204)||(27028280-27028384)
chr7 (101-160)||(5069864-5069923)
chr7 (102-204)||(13095860-13095963)
chr7 (102-184)||(22993391-22993474)
chr7 (102-157)||(29151942-29151997)
chr7 (102-160)||(16802125-16802183)
chr7 (102-160)||(49142718-49142776)
chr7 (102-163)||(10047922-10047983)
chr7 (102-163)||(43925514-43925575)
chr7 (102-163)||(48804685-48804746)
chr7 (109-200)||(4705992-4706084)
chr7 (102-204)||(1605943-1606046)
chr7 (102-204)||(48244360-48244463)
chr7 (102-160)||(1797462-1797520)
chr7 (93-158)||(24969377-24969440)
chr7 (102-160)||(47341878-47341936)
chr7 (102-163)||(365142-365203)
chr7 (102-163)||(14650319-14650380)
chr7 (102-163)||(22973969-22974030)
chr7 (102-163)||(36619300-36619361)
chr7 (127-160)||(42210311-42210344)
chr7 (102-150)||(22268088-22268136)
chr7 (124-163)||(4228800-4228839)
chr7 (124-163)||(19914749-19914788)
chr7 (110-157)||(23658189-23658236)
chr7 (102-184)||(26423311-26423394)
chr7 (102-160)||(34659228-34659286)
chr7 (102-204)||(10317750-10317852)
chr7 (125-163)||(29805486-29805524)
chr7 (102-160)||(37514923-37514981)
chr7 (125-163)||(39420862-39420900)
chr7 (110-160)||(44336903-44336953)
chr7 (127-160)||(3353451-3353484)
chr7 (102-160)||(3603355-3603417)
chr7 (60-93)||(14650263-14650296)
chr7 (102-163)||(22573815-22573875)
chr7 (102-163)||(42032098-42032159)
chr7 (101-201)||(45447971-45448072)
[»] chr4 (51 HSPs)
chr4 (102-204)||(53599064-53599167)
chr4 (101-204)||(42722581-42722685)
chr4 (102-160)||(2559311-2559369)
chr4 (102-163)||(20532455-20532516)
chr4 (102-204)||(21429305-21429408)
chr4 (102-204)||(38168261-38168363)
chr4 (102-160)||(3159518-3159576)
chr4 (102-163)||(1446830-1446891)
chr4 (102-163)||(7246692-7246753)
chr4 (102-163)||(15839981-15840041)
chr4 (108-204)||(16450310-16450407)
chr4 (102-163)||(29895791-29895852)
chr4 (102-204)||(13073542-13073645)
chr4 (102-204)||(33647725-33647828)
chr4 (102-161)||(40272379-40272438)
chr4 (109-163)||(4738629-4738683)
chr4 (102-203)||(8889026-8889128)
chr4 (109-163)||(20421784-20421838)
chr4 (102-160)||(47078462-47078520)
chr4 (123-160)||(295582-295619)
chr4 (102-163)||(16645122-16645183)
chr4 (98-163)||(20354637-20354702)
chr4 (102-163)||(38075437-38075498)
chr4 (133-204)||(14597904-14597976)
chr4 (125-204)||(17080070-17080150)
chr4 (101-160)||(21192645-21192702)
chr4 (102-157)||(14124020-14124075)
chr4 (102-204)||(24166454-24166557)
chr4 (102-184)||(52950086-52950169)
chr4 (102-160)||(10541020-10541078)
chr4 (100-204)||(40780865-40780970)
chr4 (102-160)||(48015122-48015180)
chr4 (102-163)||(6779215-6779276)
chr4 (102-163)||(43468351-43468412)
chr4 (102-163)||(55921038-55921099)
chr4 (102-158)||(43458617-43458673)
chr4 (102-204)||(8064802-8064905)
chr4 (102-160)||(27248432-27248488)
chr4 (101-160)||(29588739-29588798)
chr4 (102-160)||(36262816-36262872)
chr4 (125-160)||(49260714-49260749)
chr4 (126-156)||(8424582-8424612)
chr4 (111-184)||(14859304-14859378)
chr4 (102-160)||(15732497-15732555)
chr4 (102-160)||(38166031-38166089)
chr4 (125-163)||(46108718-46108756)
chr4 (98-160)||(48317324-48317386)
chr4 (127-160)||(5472897-5472930)
chr4 (102-163)||(36145261-36145322)
chr4 (125-161)||(35359763-35359799)
chr4 (127-163)||(49952192-49952228)
[»] chr2 (54 HSPs)
chr2 (102-204)||(7747273-7747376)
chr2 (102-204)||(41220634-41220737)
chr2 (102-184)||(38962762-38962845)
chr2 (102-163)||(3643933-3643994)
chr2 (100-163)||(10026662-10026725)
chr2 (102-204)||(25540408-25540511)
chr2 (102-184)||(39806909-39806992)
chr2 (102-160)||(10823059-10823117)
chr2 (102-203)||(6358156-6358258)
chr2 (102-160)||(9360797-9360855)
chr2 (102-160)||(11069877-11069935)
chr2 (102-160)||(12455309-12455367)
chr2 (102-160)||(44139483-44139541)
chr2 (102-160)||(45263716-45263774)
chr2 (102-163)||(331500-331561)
chr2 (102-163)||(13026457-13026518)
chr2 (102-163)||(34356205-34356266)
chr2 (93-184)||(3848938-3849030)
chr2 (102-204)||(7787055-7787158)
chr2 (102-161)||(19976855-19976914)
chr2 (100-163)||(25604592-25604654)
chr2 (125-203)||(39201513-39201592)
chr2 (102-161)||(40968963-40969022)
chr2 (102-160)||(8410130-8410188)
chr2 (102-160)||(21286443-21286501)
chr2 (125-163)||(24179590-24179628)
chr2 (102-163)||(2550867-2550928)
chr2 (104-204)||(10669593-10669694)
chr2 (102-163)||(12864223-12864284)
chr2 (126-163)||(13104871-13104908)
chr2 (102-163)||(18649072-18649133)
chr2 (110-163)||(22593142-22593194)
chr2 (102-163)||(38005401-38005462)
chr2 (119-163)||(20116658-20116702)
chr2 (121-200)||(26805314-26805394)
chr2 (125-160)||(2149243-2149278)
chr2 (121-160)||(27725958-27725997)
chr2 (101-160)||(29653625-29653684)
chr2 (125-160)||(37560195-37560230)
chr2 (105-160)||(41031955-41032010)
chr2 (101-160)||(42770700-42770759)
chr2 (102-160)||(15079482-15079540)
chr2 (102-163)||(20612581-20612643)
chr2 (125-163)||(33005773-33005811)
chr2 (102-160)||(35946738-35946795)
chr2 (93-163)||(41187699-41187769)
chr2 (123-204)||(44945613-44945695)
chr2 (110-163)||(16325602-16325655)
chr2 (105-157)||(2528393-2528445)
chr2 (102-158)||(16034936-16034992)
chr2 (111-185)||(28525478-28525554)
chr2 (104-168)||(29421285-29421347)
chr2 (125-204)||(34346291-34346371)
chr2 (127-163)||(41187873-41187909)
[»] chr8 (36 HSPs)
chr8 (102-200)||(10927609-10927708)
chr8 (102-200)||(6100475-6100574)
chr8 (102-200)||(1012985-1013084)
chr8 (102-204)||(3418517-3418620)
chr8 (102-163)||(8141105-8141166)
chr8 (101-163)||(583816-583876)
chr8 (102-204)||(4479300-4479402)
chr8 (102-160)||(44893327-44893385)
chr8 (102-163)||(2467164-2467225)
chr8 (102-202)||(24938568-24938669)
chr8 (102-163)||(43027308-43027369)
chr8 (102-204)||(8997548-8997651)
chr8 (102-192)||(33401815-33401906)
chr8 (102-160)||(14666120-14666178)
chr8 (102-156)||(34613831-34613885)
chr8 (102-160)||(38922463-38922521)
chr8 (130-202)||(3692864-3692937)
chr8 (102-163)||(6042824-6042885)
chr8 (102-163)||(9860041-9860102)
chr8 (102-163)||(33935781-33935842)
chr8 (85-149)||(6940544-6940608)
chr8 (100-160)||(13359023-13359083)
chr8 (101-204)||(18374012-18374116)
chr8 (101-157)||(43032903-43032959)
chr8 (101-160)||(17981443-17981502)
chr8 (102-160)||(2964079-2964137)
chr8 (125-163)||(8586985-8587023)
chr8 (102-160)||(15884605-15884662)
chr8 (110-160)||(20240581-20240631)
chr8 (110-160)||(20252436-20252486)
chr8 (101-163)||(26570926-26570988)
chr8 (102-163)||(11785919-11785979)
chr8 (102-163)||(14846579-14846639)
chr8 (127-160)||(18091428-18091461)
chr8 (102-163)||(45521172-45521232)
chr8 (120-160)||(7673706-7673746)
[»] chr6 (27 HSPs)
chr6 (102-204)||(21898651-21898754)
chr6 (103-163)||(29444811-29444871)
chr6 (102-163)||(29333185-29333245)
chr6 (101-161)||(33859367-33859427)
chr6 (102-160)||(12606433-12606491)
chr6 (102-163)||(5253269-5253330)
chr6 (102-163)||(14107404-14107465)
chr6 (102-162)||(13584497-13584557)
chr6 (102-164)||(8612019-8612081)
chr6 (127-199)||(8888910-8888983)
chr6 (102-163)||(13036050-13036111)
chr6 (109-160)||(9366472-9366523)
chr6 (102-164)||(3587990-3588052)
chr6 (114-163)||(375020-375069)
chr6 (126-163)||(5029844-5029881)
chr6 (102-163)||(8932664-8932725)
chr6 (102-163)||(8944130-8944191)
chr6 (102-163)||(34954665-34954726)
chr6 (127-163)||(11142631-11142667)
chr6 (125-160)||(13391312-13391347)
chr6 (125-156)||(30788906-30788937)
chr6 (101-143)||(2105156-2105198)
chr6 (126-160)||(9633674-9633708)
chr6 (102-160)||(13468936-13468994)
chr6 (102-163)||(6606143-6606204)
chr6 (111-175)||(10396486-10396550)
chr6 (111-163)||(17114943-17114995)
[»] chr5 (47 HSPs)
chr5 (102-204)||(5731924-5732027)
chr5 (111-204)||(40117424-40117518)
chr5 (101-163)||(11845847-11845909)
chr5 (102-163)||(9805004-9805065)
chr5 (64-160)||(21149696-21149792)
chr5 (102-204)||(42086327-42086430)
chr5 (102-160)||(7866581-7866639)
chr5 (102-164)||(9812872-9812934)
chr5 (102-160)||(38897768-38897825)
chr5 (102-163)||(1538431-1538492)
chr5 (102-163)||(23383657-23383718)
chr5 (102-163)||(28857128-28857189)
chr5 (102-163)||(30349579-30349640)
chr5 (102-204)||(3653918-3654019)
chr5 (102-158)||(25417234-25417290)
chr5 (101-156)||(31890089-31890144)
chr5 (123-204)||(9168257-9168339)
chr5 (102-164)||(12705014-12705076)
chr5 (102-164)||(12766131-12766193)
chr5 (102-163)||(14588663-14588724)
chr5 (102-163)||(19572724-19572785)
chr5 (102-163)||(41163506-41163566)
chr5 (108-160)||(20682666-20682718)
chr5 (102-204)||(8513519-8513622)
chr5 (102-204)||(20525838-20525941)
chr5 (102-151)||(1899001-1899050)
chr5 (102-163)||(7308410-7308471)
chr5 (102-163)||(13664260-13664321)
chr5 (110-155)||(21487625-21487670)
chr5 (111-160)||(25467419-25467468)
chr5 (125-204)||(37263263-37263343)
chr5 (126-161)||(20705587-20705622)
chr5 (101-160)||(35403561-35403620)
chr5 (102-204)||(42291509-42291612)
chr5 (102-160)||(12081908-12081966)
chr5 (125-163)||(14974370-14974408)
chr5 (125-163)||(20590022-20590060)
chr5 (102-160)||(30995121-30995179)
chr5 (96-157)||(4016307-4016368)
chr5 (108-161)||(16757384-16757437)
chr5 (102-163)||(18136326-18136387)
chr5 (100-157)||(19839325-19839382)
chr5 (111-160)||(35638082-35638131)
chr5 (121-184)||(20255388-20255452)
chr5 (135-163)||(22295249-22295277)
chr5 (102-150)||(40060296-40060344)
chr5 (135-163)||(42861264-42861292)
[»] chr1 (57 HSPs)
chr1 (102-200)||(5855522-5855621)
chr1 (102-204)||(10422788-10422891)
chr1 (102-161)||(16263545-16263604)
chr1 (102-204)||(45361887-45361990)
chr1 (100-163)||(33498886-33498949)
chr1 (102-204)||(49078114-49078217)
chr1 (102-160)||(45536708-45536766)
chr1 (102-163)||(47312946-47313006)
chr1 (102-184)||(11397914-11397996)
chr1 (102-204)||(43959826-43959929)
chr1 (125-187)||(2270278-2270340)
chr1 (100-157)||(9853330-9853387)
chr1 (102-163)||(10336516-10336577)
chr1 (102-163)||(32142893-32142954)
chr1 (102-163)||(41663903-41663964)
chr1 (102-163)||(48798117-48798178)
chr1 (127-163)||(19195391-19195427)
chr1 (105-160)||(6563444-6563499)
chr1 (101-160)||(17642054-17642113)
chr1 (102-157)||(34877990-34878045)
chr1 (102-157)||(40288530-40288585)
chr1 (93-160)||(50371884-50371951)
chr1 (121-163)||(10507717-10507759)
chr1 (102-160)||(12036794-12036852)
chr1 (102-160)||(15465965-15466023)
chr1 (102-160)||(18915867-18915925)
chr1 (101-163)||(30927774-30927836)
chr1 (109-163)||(32150969-32151023)
chr1 (102-156)||(33418169-33418223)
chr1 (102-163)||(35908757-35908819)
chr1 (102-163)||(32871-32932)
chr1 (102-163)||(9659226-9659286)
chr1 (102-163)||(13265938-13265999)
chr1 (93-158)||(18649404-18649469)
chr1 (102-163)||(26660138-26660199)
chr1 (100-200)||(42710147-42710248)
chr1 (102-193)||(45726449-45726541)
chr1 (125-204)||(50094927-50095007)
chr1 (93-160)||(14357746-14357813)
chr1 (102-160)||(8763991-8764049)
chr1 (102-160)||(13262083-13262141)
chr1 (127-184)||(16956491-16956549)
chr1 (102-160)||(33004065-33004123)
chr1 (102-152)||(34334353-34334403)
chr1 (117-163)||(38791657-38791703)
chr1 (102-160)||(50503411-50503469)
chr1 (60-93)||(8905281-8905314)
chr1 (126-163)||(10173018-10173055)
chr1 (107-160)||(21849255-21849307)
chr1 (102-163)||(26325812-26325873)
chr1 (117-158)||(31734303-31734344)
chr1 (102-163)||(34697335-34697396)
chr1 (123-160)||(42744799-42744836)
chr1 (102-166)||(15238150-15238214)
chr1 (101-204)||(17092482-17092586)
chr1 (57-93)||(31576678-31576714)
chr1 (107-163)||(35211219-35211275)
[»] scaffold0291 (1 HSPs)
scaffold0291 (102-204)||(6857-6960)
[»] scaffold0170 (1 HSPs)
scaffold0170 (93-160)||(9838-9905)
[»] scaffold0316 (1 HSPs)
scaffold0316 (102-163)||(1660-1721)
[»] scaffold0016 (1 HSPs)
scaffold0016 (102-163)||(8747-8808)
[»] scaffold0002 (1 HSPs)
scaffold0002 (102-163)||(319424-319485)
[»] scaffold0209 (1 HSPs)
scaffold0209 (101-163)||(12576-12636)
[»] scaffold0376 (1 HSPs)
scaffold0376 (102-160)||(12672-12730)
[»] scaffold0086 (1 HSPs)
scaffold0086 (102-160)||(26185-26243)
[»] scaffold0004 (1 HSPs)
scaffold0004 (102-163)||(95027-95086)
[»] scaffold0005 (2 HSPs)
scaffold0005 (133-204)||(219402-219474)
scaffold0005 (102-160)||(271123-271181)
[»] scaffold0341 (1 HSPs)
scaffold0341 (105-160)||(18637-18692)
[»] scaffold0384 (1 HSPs)
scaffold0384 (102-163)||(5975-6035)
[»] scaffold0010 (2 HSPs)
scaffold0010 (109-185)||(25807-25884)
scaffold0010 (111-160)||(155760-155809)
[»] scaffold0050 (1 HSPs)
scaffold0050 (102-154)||(72634-72686)
[»] scaffold0041 (1 HSPs)
scaffold0041 (125-204)||(25110-25190)
[»] scaffold0001 (1 HSPs)
scaffold0001 (125-204)||(65156-65236)
[»] scaffold0079 (1 HSPs)
scaffold0079 (102-157)||(8177-8231)
[»] scaffold0009 (1 HSPs)
scaffold0009 (102-163)||(42878-42939)


Alignment Details
Target: chr3 (Bit Score: 191; Significance: 1e-103; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 236 - 430
Target Start/End: Complemental strand, 40660312 - 40660118
Alignment:
Q  236 cggattgtagcctatagaggaggttatcacccgggttttgatagtaaatttaaaatgttggtataatgaaaaaatatacttaattaacagatagatattt 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40660312 cggattgtagcctatagaggaggttatcacccgggttttgatagtaaatttaaaatgttggtataatgaaaaaatatacttaattaacagataaatattt 40660213  T
Q  336 tgagtgcatgcacctgatcatgatggtcatcgtggatgacatgctgcaaatccaactgtgcctgggcttttgtggattcataacgcgatgatgat 430  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40660212 tgagtgcatgcacctgatcatgatggtcatcgtggatgacatgctgcaaatccaactgtgcctgggcttttgtggattcataacgcgatgatgat 40660118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 7 - 204
Target Start/End: Complemental strand, 40660544 - 40660332
Alignment:
Q  7 agttacaacatgcaattcttcactccctaggctcattagaagtaaagaaactgaaccaagttgtttggactctagtgacaaggagct------------- 93  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||| |||||  ||||||||||||||| ||||                 
T  40660544 agttacaacatgcaattcttcactccctaggctgattagaagtaaagaaatagaaccaaattgttcagactctagtgacaagaagctccttctaaagagt 40660445  T
Q  94 -atctgaaaaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagat 191  Q
     ||| |  ||||||||| ||||||| |||||||||||||| ||||| ||||||||||||||||||||||||| | ||||| |||||||||||| || | |    
T  40660444 tatccgggaaataccggattcgattcctaggaggaacaacatttggtcagtgcgcatgcctctacgcatgaaccggattaatcattcacctttggtgggt 40660345  T
Q  192 cgaaaaccggtgc 204  Q
    |||||||||||||    
T  40660344 cgaaaaccggtgc 40660332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 54261225 - 54261328
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||  | |||||||| |||||||||||| | ||| ||||||    
T  54261225 aataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccg 54261324  T
Q  201 gtgc 204  Q
    ||||    
T  54261325 gtgc 54261328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 49198350 - 49198411
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| ||||| ||||||||  |||||||||||||||||||||||||||||    
T  49198350 aataccgggttcgattcctagggggaacaacacttggccagtgcgcatgcctctacgcatga 49198411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 30045820 - 30045903
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcaccttt 184  Q
    |||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||||||| || || |||||||| | |||||||    
T  30045820 aataccgggttcgattcctagggggaacaacgcttggccagtgcgcatgtctctacgcacgagtctgattagtcgtccaccttt 30045903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 35923731 - 35923628
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatcg-attagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||| |||||||||  |||| |||||||||||||||||||||||||||||||| ||| || ||| ||||||| | || ||||  | ||||||||||||    
T  35923731 aataccaggttcgattcatagggggaacaacgtttggccagtgcgcatgcctctaagcacgagtcgaattagtcgtccatctttgatggatcgaaaaccg 35923632  T
Q  201 gtgc 204  Q
    ||||    
T  35923631 gtgc 35923628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 48342019 - 48342122
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||||||| ||| ||||| ||||||||| ||||| |||||||||||||||||||||||| | |||||||| | || |||| || ||||| |||| |    
T  48342019 aataccgggttctattcctagggggaacaacgcttggctagtgcgcatgcctctacgcatgaaccagattagtcgtccatctttggtggatcggaaacag 48342118  T
Q  201 gtgc 204  Q
    ||||    
T  48342119 gtgc 48342122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 15320185 - 15320243
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||||||||| ||||||||||| | |||||||||| |||||||||||||||    
T  15320185 aataccgggttcgatttcgaggaggaacaatgattggccagtgtgcatgcctctacgca 15320243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 160
Target Start/End: Original strand, 10855382 - 10855441
Alignment:
Q  101 aaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||| |||||| ||| ||||||||| ||||||||| ||||||||||||||||    
T  10855382 aaataccgggtttgatttccagggggaacaacgcttggccagtacgcatgcctctacgca 10855441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 8164552 - 8164610
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||| ||||||| | ||||||||| ||||||||||||||||||| ||||||    
T  8164552 aataccgggttcaatttctaaggggaacaacgcttggccagtgcgcatgcctttacgca 8164610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 47749212 - 47749155
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||||||| ||||| ||||||||  ||||||||||||||||||||||||||    
T  47749212 aataccgggttcgattcctagg-ggaacaactcttggccagtgcgcatgcctctacgca 47749155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 3755569 - 3755630
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||  ||||||| | ||||||||||||||||| |||||||||||| ||||||||||||    
T  3755569 aataccgacttcgattcccaggaggaacaacgtttgaccagtgcgcatgtctctacgcatga 3755630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 6462411 - 6462472
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||||||||||   |||  |||||||| |||||||||||||||||||||||||||||    
T  6462411 aataccgggttcgattcacagggagaacaacgcttggccagtgcgcatgcctctacgcatga 6462472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 28242277 - 28242338
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||||| |||| | ||||||||||| ||||||||||||| |||||||||| ||||||    
T  28242277 aataccgggttagattgccaggaggaacaatgtttggccagtgcacatgcctctatgcatga 28242338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 29135912 - 29135973
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||| ||||||| | ||| ||||||||  |||||||||||||||||||||||||||||    
T  29135912 aataccggattcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatga 29135973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 33251661 - 33251722
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| |  |  |||||||||||||||||||| ||||||||||||||||||    
T  33251661 aataccgggttcgattcccggtgggaacaacgtttggccagtgtgcatgcctctacgcatga 33251722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 35315955 - 35316016
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||| ||||||||||| | ||| ||||||||  |||||||||||||||||||||||||||||    
T  35315955 aatatcgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatga 35316016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 45877453 - 45877514
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||||| ||| | ||||||  ||||||||||| |||||||||||||||||    
T  45877453 aataccgggttcgatttccaggggaaacaacacttggccagtgcacatgcctctacgcatga 45877514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 204
Target Start/End: Original strand, 7328842 - 7328945
Alignment:
Q  101 aaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaacc 199  Q
    ||||||||||||||||| | ||| ||||||||  ||||||||||||||||||| |||||||||  | ||||||||   ||||||| || | |||||||||    
T  7328842 aaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcct-tacgcatgagccggattagtcgcccacctttggtgggtcgaaaacc 7328940  T
Q  200 ggtgc 204  Q
    |||||    
T  7328941 ggtgc 7328945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 26043812 - 26043872
Alignment:
Q  103 ataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||||||||| | |||  |||||||  |||||||||||||||||||||||||||||    
T  26043812 ataccgggttcgattcccagggagaacaacacttggccagtgcgcatgcctctacgcatga 26043872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 3136801 - 3136699
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||| ||||||||  ||| ||||||||  |||| |||||||||||||||||||||||| || |||||||| | ||||||| || | ||| ||||||    
T  3136801 aataccggattcgattttcagg-ggaacaacacttgggcagtgcgcatgcctctacgcatgagtcggattagtcgtccacctttggttggtcggaaaccg 3136703  T
Q  201 gtgc 204  Q
    ||||    
T  3136702 gtgc 3136699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 3507641 - 3507538
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    ||||||||||| |||| ||||  ||||||||  |||||||||||||||||||||||||| ||  | ||||||||  |||||||| || | ||| ||||||    
T  3507641 aataccgggtttgattcctagagggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgctcacctttggtgggtcggaaaccg 3507542  T
Q  201 gtgc 204  Q
    ||||    
T  3507541 gtgc 3507538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 8362576 - 8362679
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||||||| ||| | ||  | ||||||||||||||||| |||||||||||||||||||  |  ||||||| | |||||||||| ||||  ||||||    
T  8362576 aataccgggttcaattcccagtggaaacaacgtttggccagtccgcatgcctctacgcatgagccaaattagtcgtccacctttagtggatccgaaaccg 8362675  T
Q  201 gtgc 204  Q
    ||||    
T  8362676 gtgc 8362679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 13893925 - 13894028
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    ||||||||||| |||||| ||| ||||||||| |||| || ||||||||||||||| || ||  | ||||||||   ||||||| || ||||||||||||    
T  13893925 aataccgggttggatttccagggggaacaacgcttggtcaatgcgcatgcctctacacacgagccggattagtcgcccacctttggtggatcgaaaaccg 13894024  T
Q  201 gtgc 204  Q
    ||||    
T  13894025 gtgc 13894028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 30767355 - 30767297
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||| ||||||||||||| ||| ||||||||  |||||||||| |||||||||||||||    
T  30767355 aatatcgggttcgatttccagggggaacaacacttggccagtgtgcatgcctctacgca 30767297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 31072877 - 31072935
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||| ||||||||||| ||| ||||||||| |||| |||||| ||||||||||||||    
T  31072877 aataccaggttcgatttccagggggaacaacgcttggtcagtgcacatgcctctacgca 31072935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 187
Target Start/End: Complemental strand, 45402459 - 45402373
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagt 187  Q
    |||| ||||||||||| ||||  ||||||||  | |||| ||||||||||||||||||||||  | |||||||| ||||||||||||    
T  45402459 aatatcgggttcgattcctagagggaacaacactcggcctgtgcgcatgcctctacgcatgagccggattagtcgttcacctttagt 45402373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 52364908 - 52364850
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||| |||||||| | || |||||||||| ||| ||||||||||||||||||||||    
T  52364908 aataccgagttcgattcccagaaggaacaacgcttgaccagtgcgcatgcctctacgca 52364850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 26207909 - 26207848
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| | | | ||||||||| ||| |||||| ||||||||||||||||||    
T  26207909 aataccgggttcgattcccacggggaacaacgcttgtccagtgtgcatgcctctacgcatga 26207848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 29127918 - 29127979
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||| ||||||||||||| |||  |||||||  |||| ||||||||||||||||||||||||    
T  29127918 aatatcgggttcgatttccagggagaacaacacttggtcagtgcgcatgcctctacgcatga 29127979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 42412882 - 42412821
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| |  || ||||||||| ||||| ||||| |||||||||||||||||    
T  42412882 aataccgggttcgattcccggggggaacaacgcttggcaagtgcccatgcctctacgcatga 42412821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 49082823 - 49082920
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaac 198  Q
    ||||||| |||||||| | |||  |||||||| || |||||||||||||| ||||| || ||||| |||||||||  |||||||| | ||||||||||    
T  49082823 aataccgagttcgattcccagggagaacaacgcttagccagtgcgcatgcatctacacacgaatcagattagtcacccacctttaatggatcgaaaac 49082920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 204
Target Start/End: Original strand, 23511593 - 23511669
Alignment:
Q  129 caacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccggtgc 204  Q
    ||||||||| ||||||||||||||||||||||||| || ||||| || | |||||||  | | ||||||||||||||    
T  23511593 caacgtttgaccagtgcgcatgcctctacgcatgagtcggattaatcgtccacctttgatgggtcgaaaaccggtgc 23511669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 39849091 - 39849131
Alignment:
Q  123 gaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||||| |||||||||| ||||||||||||||||||    
T  39849091 gaggaacaacgcttggccagtgtgcatgcctctacgcatga 39849131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 204
Target Start/End: Original strand, 41219610 - 41219694
Alignment:
Q  121 aggaggaacaacgtttggccagtgcgcatgcctctacgcatga-atcgattagtcattcacctttagtagatcgaaaaccggtgc 204  Q
    |||||||||||||||||||||||||| |||||||| |||| ||  | ||||| ||| |||||||| || ||||| ||||| ||||    
T  41219610 aggaggaacaacgtttggccagtgcgtatgcctctgcgcacgagctggattaatcactcacctttggtggatcgtaaaccagtgc 41219694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 160
Target Start/End: Original strand, 10040578 - 10040613
Alignment:
Q  125 ggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||||| ||||||||||||||||||||||||||    
T  10040578 ggaacaacgcttggccagtgcgcatgcctctacgca 10040613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 204
Target Start/End: Complemental strand, 20948173 - 20948066
Alignment:
Q  98 gaaaaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaa 196  Q
    ||||||||| |||||||||| | |   |||||||| |||| |||||| ||||||||||| ||| |||   |||||||| |||||| || |||||||||||    
T  20948173 gaaaaatactgggttcgattaccaaagggaacaacatttgaccagtgtgcatgcctctatgcacgaacgagattagtcgttcaccgttggtagatcgaaa 20948074  T
Q  197 accggtgc 204  Q
    | ||||||    
T  20948073 atcggtgc 20948066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 34662427 - 34662328
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatcg-attagtcattcacctttagtagatcgaaaaccg 200  Q
    |||| ||||||||||||  |||||||| ||||||||| |||| |||||| ||||| ||||||  || ||||||| | |||||||||| ||| | ||||||    
T  34662427 aatatcgggttcgattttcaggaggaataacgtttggtcagtacgcatgtctctatgcatgagccgaattagtcgtccacctttagtggattggaaaccg 34662328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 41630622 - 41630559
Alignment:
Q  100 aaaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||| ||| | | | ||||||||| ||| ||||||||||||||||||| |||||    
T  41630622 aaaataccgggttcaattcccaaggggaacaacgcttgcccagtgcgcatgcctctacacatga 41630559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 51060389 - 51060286
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaa-tcgattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||| |||||||||||   ||| ||||||||  |||| ||||||||||||||||||||||||| | |||||||| | |||| || || | ||| ||||||    
T  51060389 aatatcgggttcgattctcagggggaacaacacttggtcagtgcgcatgcctctacgcatgaactggattagtcgtccaccattggtgggtcggaaaccg 51060290  T
Q  201 gtgc 204  Q
    ||||    
T  51060289 gtgc 51060286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 53649726 - 53649829
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    ||||||||||||||||   |||  |||||||  ||||||||||||| || ||||||||||||  | |||||||| |||||||||  | ||||| ||||||    
T  53649726 aataccgggttcgattctcagggtgaacaacacttggccagtgcgcctgtctctacgcatgagccggattagtcgttcacctttgatggatcggaaaccg 53649825  T
Q  201 gtgc 204  Q
    ||||    
T  53649826 gtgc 53649829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 160
Target Start/End: Complemental strand, 55069764 - 55069729
Alignment:
Q  125 ggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||||||||||||||||| ||||||||||||||    
T  55069764 ggaacaacgtttggccagtgcacatgcctctacgca 55069729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 7650226 - 7650284
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||||||||| ||| ||||||||  ||||||||| || ||| |||||||||    
T  7650226 aataccgggttcgatttccagggggaacaacacttggccagtacgaatgtctctacgca 7650284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 11687217 - 11687143
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtca 175  Q
    ||||||||||| ||||   ||| ||||||| | |||||||||||||||||||||||| |||| || |||||||||    
T  11687217 aataccgggtttgattctcagggggaacaatgcttggccagtgcgcatgcctctacgtatgagtcagattagtca 11687143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 15795601 - 15795544
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||| |||||||| | ||| ||||||||| |||| |||||||||||||||||||||    
T  15795601 aataccgagttcgattcccagg-ggaacaacgcttggtcagtgcgcatgcctctacgca 15795544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 41223121 - 41223087
Alignment:
Q  127 aacaacgtttggccagtgcgcatgcctctacgcat 161  Q
    ||||||||||||||| |||||||||||||||||||    
T  41223121 aacaacgtttggccaatgcgcatgcctctacgcat 41223087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 32873657 - 32873596
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||| ||||||||| |||||  |||||||| ||| ||||||| |||||||||||| ||||    
T  32873657 aataccaggttcgattcctagggagaacaacgcttgaccagtgcacatgcctctacgtatga 32873596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 33688950 - 33689011
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||| ||||||| ||| ||| | |||| |||  |||||||||||||||||||||||||||||    
T  33688950 aatatcgggttcaattcctaaggggaataacacttggccagtgcgcatgcctctacgcatga 33689011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 47219143 - 47219204
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||| ||||||||| | | | | ||||||| ||||| |||||||||||||||||||||||    
T  47219143 aataccaggttcgattcccaagggaaacaacgcttggctagtgcgcatgcctctacgcatga 47219204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 47471831 - 47471891
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| | ||| ||||||| | ||||| ||||||||||| |||||||||||    
T  47471831 aataccgggttcgattcccagg-ggaacaatgcttggctagtgcgcatgcttctacgcatga 47471891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 51683062 - 51683009
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctct 155  Q
    |||||| ||||||||| | ||| ||||||||| ||| |||||||||||||||||    
T  51683062 aataccaggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctct 51683009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 50405705 - 50405653
Alignment:
Q  108 gggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||| | ||| | ||||||| ||| ||||||||||||||||||||||    
T  50405705 gggttcgattccgaggggaaacaacgcttgaccagtgcgcatgcctctacgca 50405653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 148
Target Start/End: Original strand, 50682482 - 50682522
Alignment:
Q  108 gggttcgatttctaggaggaacaacgtttggccagtgcgca 148  Q
    ||||||||||||||||  |||||||| ||||||||||||||    
T  50682482 gggttcgatttctagggagaacaacgcttggccagtgcgca 50682522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 3e-30; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 43862079 - 43861976
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||| || ||||||||||||    
T  43862079 aataccgggttcgattcccagggggaacaacgtttggccagtgcgcatgcctctacgcatgagccggattagtcattcacctttggtggatcgaaaaccg 43861980  T
Q  201 gtgc 204  Q
    ||||    
T  43861979 gtgc 43861976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 18785671 - 18785774
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaa-tcgattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||||||||||| ||||| ||||||||  |||||||||||||||||||||||||||||| | |||||||| ||||||| | || | ||| ||||||    
T  18785671 aataccgggttcgattcctagggggaacaacacttggccagtgcgcatgcctctacgcatgaactggattagtcgttcacctctggtgggtcggaaaccg 18785770  T
Q  201 gtgc 204  Q
    ||||    
T  18785771 gtgc 18785774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 4195309 - 4195248
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||| |||||||||| |||||||||||| |||||| |||||||||||||||||||||||    
T  4195309 aataccgagttcgatttccaggaggaacaacatttggctagtgcgcatgcctctacgcatga 4195248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 5039525 - 5039422
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    ||||||| |||||||| ||||||||||||||  |||| |||||| ||| |||||||||||||  | ||||||||  |||||||| || ||||||||||||    
T  5039525 aataccgagttcgattcctaggaggaacaacacttggtcagtgcacatacctctacgcatgagccggattagtcgctcacctttggtggatcgaaaaccg 5039426  T
Q  201 gtgc 204  Q
    ||||    
T  5039425 gtgc 5039422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 27875195 - 27875092
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatcg-attagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||| ||||||| | ||| |||| |||  ||||||||||| ||||||||||||||||| ||| ||||||| | |||||||||| | ||||||||||    
T  27875195 aataccggattcgattcccagggggaataacacttggccagtgcacatgcctctacgcatgagtcgcattagtcgtccacctttagtgggtcgaaaaccg 27875096  T
Q  201 gtgc 204  Q
    ||||    
T  27875095 gtgc 27875092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 21190887 - 21190829
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||||||| ||||||||| ||||| ||||| ||||||||||||||||||||    
T  21190887 aataccgggttcgattcctaggaggagcaacgcttggctagtgcgcatgcctctacgca 21190829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 103 - 204
Target Start/End: Original strand, 39474943 - 39475045
Alignment:
Q  103 ataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccgg 201  Q
    ||||||||||||||| ||| | ||||||||| |||| |||||||||| |||||||||||||  | |||||||| | |||||||||| | ||||||||| |    
T  39474943 ataccgggttcgattcctatggggaacaacgcttggtcagtgcgcatacctctacgcatgagccggattagtcgtccacctttagtgggtcgaaaaccag 39475042  T
Q  202 tgc 204  Q
    |||    
T  39475043 tgc 39475045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 38578974 - 38578913
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||| ||||||||||| | ||| ||||||||| |||||||||||||||||||||||||||||    
T  38578974 aatatcgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatga 38578913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 17748489 - 17748433
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacg 158  Q
    |||||||||||||||| | ||| ||||||||| ||||||||||||||||||||||||    
T  17748489 aataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacg 17748433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 101 - 204
Target Start/End: Original strand, 27028280 - 27028384
Alignment:
Q  101 aaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga-atcgattagtcattcacctttagtagatcgaaaacc 199  Q
    ||||||| ||||||||||| ||| ||||||||  ||||||||||||||||||||||| |||||  | ||||||||  |||||||| || | ||| |||||    
T  27028280 aaataccaggttcgatttccagggggaacaacacttggccagtgcgcatgcctctacacatgagctggattagtcgctcacctttggtgggtcggaaacc 27028379  T
Q  200 ggtgc 204  Q
    |||||    
T  27028380 ggtgc 27028384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 160
Target Start/End: Complemental strand, 5069923 - 5069864
Alignment:
Q  101 aaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||||||||||||||| ||||||||||||| || || |||| |||||||||||||||    
T  5069923 aaataccgggttcgatttccaggaggaacaacgcttagctagtgtgcatgcctctacgca 5069864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 13095860 - 13095963
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||||||| ||| | ||| ||||||||  |||||||||||||||||||||||||||||  | ||||||||  |||||||| || | ||| ||||||    
T  13095860 aataccgggttctattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccg 13095959  T
Q  201 gtgc 204  Q
    ||||    
T  13095960 gtgc 13095963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 184
Target Start/End: Complemental strand, 22993474 - 22993391
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcaccttt 184  Q
    |||| ||||||||||| | ||||||||||||| |||||||||| ||||||||||||||| ||| | ||||||||  ||||||||    
T  22993474 aatatcgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtcgctcaccttt 22993391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 29151942 - 29151997
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctac 157  Q
    |||||||||||||||| | |||| |||||||||||| |||||||||||||||||||    
T  29151942 aataccgggttcgattcccaggaagaacaacgtttgaccagtgcgcatgcctctac 29151997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 16802125 - 16802183
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||| |||||||  |||||||||||||| |||||||||||| |||||||||||||    
T  16802125 aataccggattcgattcttaggaggaacaacgattggccagtgcgtatgcctctacgca 16802183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 49142776 - 49142718
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||||||| ||||| ||||||||| || |||||||| ||||||||||||||    
T  49142776 aataccgggttcgattcctagggggaacaacgcttagccagtgcacatgcctctacgca 49142718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 10047983 - 10047922
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| | ||| ||||||||  |||||||||||||| ||||||||||||||    
T  10047983 aataccgggttcgattcccagggggaacaacacttggccagtgcgcaggcctctacgcatga 10047922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 43925514 - 43925575
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| | ||| ||||||||  |||| ||||||||||||||||||||||||    
T  43925514 aataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgcatga 43925575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 48804685 - 48804746
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| | | | ||||||||  |||||||||||||||||||||||||||||    
T  48804685 aataccgggttcgattcccaaggggaacaacacttggccagtgcgcatgcctctacgcatga 48804746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 200
Target Start/End: Complemental strand, 4706084 - 4705992
Alignment:
Q  109 ggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga-atcgattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||||| |||| |||||||||||| |||| | ||||||| |||||||| ||  | |||||||| | ||||||| |||||||||||||||    
T  4706084 ggttcgatttttagggggaacaacgtttagccattacgcatgcttctacgcacgagctggattagtcgtccacctttggtagatcgaaaaccg 4705992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 1605943 - 1606046
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||| ||||||||||| ||| ||||||||| ||||||||||| |||||||||| || |||  | ||||||||   ||||||| || ||||| ||||||    
T  1605943 aatacctggttcgatttccagggggaacaacgcttggccagtgcacatgcctctaggcttgagccggattagtcgcccacctttggtggatcggaaaccg 1606042  T
Q  201 gtgc 204  Q
    ||||    
T  1606043 gtgc 1606046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 48244463 - 48244360
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||||||| ||||||| | ||||||| | |||  |||||||  |||||||||||||||  | ||||||||  |||||||| || ||||||||||||    
T  48244463 aataccgggttcaatttctaaggggaacaatgcttgatcagtgcgtttgcctctacgcatgagccggattagtcgctcacctttggtggatcgaaaaccg 48244364  T
Q  201 gtgc 204  Q
    ||||    
T  48244363 gtgc 48244360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 1797462 - 1797520
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||||||| | ||| | ||||||| |||||||||||||||| |||||||||    
T  1797462 aataccgggttcgattcccaggggaaacaacgcttggccagtgcgcatgtctctacgca 1797520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 158
Target Start/End: Complemental strand, 24969440 - 24969377
Alignment:
Q  93 tatctgaaaaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacg 158  Q
    |||||| |||||||||||||||||||| ||  ||||||||  ||||||||||||| ||||||||||    
T  24969440 tatctggaaaataccgggttcgatttccag--ggaacaacacttggccagtgcgcgtgcctctacg 24969377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 47341878 - 47341936
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||| |||||||| | ||| ||||||||  ||||||||||||||||||||||||||    
T  47341878 aataccgagttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgca 47341936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 365142 - 365203
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||||||||||   ||||||||||||| ||   ||||||||||||||||||||||||    
T  365142 aataccgggttcgattcacaggaggaacaacgcttaatcagtgcgcatgcctctacgcatga 365203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 14650319 - 14650380
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||| ||||||||||||| ||||||||||| | ||| |||||||  ||||||||||||||||    
T  14650319 aatatcgggttcgatttccaggaggaacaatgcttgaccagtgcatatgcctctacgcatga 14650380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 22973969 - 22974030
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||||||||||   ||| ||||||||| |||||||||| |||||| |||||||||||    
T  22973969 aataccgggttcgattctcagggggaacaacgcttggccagtgtgcatgcgtctacgcatga 22974030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 36619361 - 36619300
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| | ||| ||||||||  ||| |||||| ||||||||||||||||||    
T  36619361 aataccgggttcgattcccagggggaacaacacttgtccagtgtgcatgcctctacgcatga 36619300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 42210344 - 42210311
Alignment:
Q  127 aacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||||||||||||||||||||||||||||||    
T  42210344 aacaacgtttggccagtgcgcatgcctctacgca 42210311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 22268136 - 22268088
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatg 150  Q
    |||||||||||||||| | ||| |||||||| |||||||||||||||||    
T  22268136 aataccgggttcgattcccagggggaacaacatttggccagtgcgcatg 22268088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 163
Target Start/End: Complemental strand, 4228839 - 4228800
Alignment:
Q  124 aggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||||||||| |||||| ||||||||||    
T  4228839 aggaacaacgtttggccagtgcacatgcccctacgcatga 4228800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 163
Target Start/End: Complemental strand, 19914788 - 19914749
Alignment:
Q  124 aggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  19914788 aggaacaacgcttggccaatgcgcatgcctctacgcatga 19914749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 157
Target Start/End: Original strand, 23658189 - 23658236
Alignment:
Q  110 gttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctac 157  Q
    |||||||||| ||| ||||||||| |||||||||| ||||||||||||    
T  23658189 gttcgatttccagggggaacaacgcttggccagtgtgcatgcctctac 23658236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 184
Target Start/End: Complemental strand, 26423394 - 26423311
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcaccttt 184  Q
    |||||||||||||||| | ||| | ||||||| ||||||||||| | |||||||||||| ||  | |||||||| |||||||||    
T  26423394 aataccgggttcgattcccaggggaaacaacgcttggccagtgcacctgcctctacgcacgagccagattagtcgttcaccttt 26423311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 34659228 - 34659286
Alignment:
Q  102 aataccgggttcgatt-tctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||||||| || ||| ||||||||| ||| ||||||||||||||||||||||    
T  34659228 aataccgggttcgattctcaagg-ggaacaacgcttgaccagtgcgcatgcctctacgca 34659286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 10317852 - 10317750
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatcgattagtcattcacctttagtagatcgaaaaccgg 201  Q
    |||||||||||||||| | ||| |||| |||  |||| ||||||| ||||||||| |||| |   ||||||||  |||||||| || ||||| |||||||    
T  10317852 aataccgggttcgattcccagggggaataacacttggtcagtgcgtatgcctctatgcataagcagattagtcgctcacctttggtggatcggaaaccgg 10317753  T
Q  202 tgc 204  Q
    |||    
T  10317752 tgc 10317750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 163
Target Start/End: Complemental strand, 29805524 - 29805486
Alignment:
Q  125 ggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  29805524 ggaacaacgtttggtcagtgcgcatgtctctacgcatga 29805486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 37514923 - 37514981
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||| |||||||||||  ||  |||||||||||||| ||||||||||| |||||||||    
T  37514923 aatactgggttcgattttcagtgggaacaacgtttggtcagtgcgcatgtctctacgca 37514981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 163
Target Start/End: Original strand, 39420862 - 39420900
Alignment:
Q  125 ggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  39420862 ggaacaacgcttggccagtgcgcgtgcctctacgcatga 39420900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 44336903 - 44336953
Alignment:
Q  110 gttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||| ||||  || ||||||||| |||||||||||||||||||||    
T  44336903 gttcgatttccaggaaaaataacgtttggtcagtgcgcatgcctctacgca 44336953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 3353451 - 3353484
Alignment:
Q  127 aacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||| |||||||||||||||||||||||||||    
T  3353451 aacaacatttggccagtgcgcatgcctctacgca 3353484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 3603355 - 3603417
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggc----cagtgcgcatgcctctacgca 160  Q
    ||||||||||||||||  | || |||||||||||||||    |||||||||||||||||||||    
T  3603355 aataccgggttcgattctttgggggaacaacgtttggccggtcagtgcgcatgcctctacgca 3603417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 14650263 - 14650296
Alignment:
Q  60 aaccaagttgtttggactctagtgacaaggagct 93  Q
    |||||||||||||||||||||||| |||||||||    
T  14650263 aaccaagttgtttggactctagtggcaaggagct 14650296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 22573815 - 22573875
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||| ||||||||||||  ||| |||||||| |||| ||||||||||||||| |||||||||    
T  22573815 aatatcgggttcgattttcagg-ggaacaacatttgaccagtgcgcatgcctttacgcatga 22573875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 42032098 - 42032159
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||| ||||||||| | | | ||||||||||||||||||||| ||| | |||||||||||    
T  42032098 aatacctggttcgattcccacggggaacaacgtttggccagtgcacatacatctacgcatga 42032159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 45447971 - 45448072
Alignment:
Q  101 aaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaacc 199  Q
    ||||||| ||||||||||| |||  |||||||| ||||| ||||||||| ||||||| ||  | || |||||||||  |||||||||| | ||| |||||    
T  45447971 aaataccaggttcgatttccagggagaacaacgcttggctagtgcgcatccctctacacactagtcagattagtcacccacctttagtgggtcggaaacc 45448070  T
Q  200 gg 201  Q
    ||    
T  45448071 gg 45448072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 8e-28; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 53599064 - 53599167
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||  | ||||| || |||||||||||| ||||| ||||||    
T  53599064 aataccgggttcgattcccaggaggaacaacgtttggccagtgcgcatgcctctacgcatgagccggattaatcgttcacctttagtggatcggaaaccg 53599163  T
Q  201 gtgc 204  Q
    ||||    
T  53599164 gtgc 53599167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 101 - 204
Target Start/End: Complemental strand, 42722685 - 42722581
Alignment:
Q  101 aaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaacc 199  Q
    ||||||||||||| ||| | ||||||||||||| |||||||||||||||||||||||||||||  | |||||||| |||||||||||| | |||||||||    
T  42722685 aaataccgggttcaattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcgaaaacc 42722586  T
Q  200 ggtgc 204  Q
    |||||    
T  42722585 ggtgc 42722581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 2559311 - 2559369
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2559311 aataccggattcgatttctaggaggaacaacgcttggccagtgcgcatgcctctacgca 2559369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 20532516 - 20532455
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  20532516 aataccgagttcgatttccaggaggaacaacgcttggccagtgcgcatgcctctacgcatga 20532455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 21429305 - 21429408
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||| |||||||||||| |||| |||||||||||| ||||||||||||||||||||||| || || || ||||| | ||||||| || | ||| ||||||    
T  21429305 aatatcgggttcgatttttagggggaacaacgtttagccagtgcgcatgcctctacgcacgagtcagactagtcgtccacctttggtgggtcggaaaccg 21429404  T
Q  201 gtgc 204  Q
    ||||    
T  21429405 gtgc 21429408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 38168261 - 38168363
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||| ||||||||| ||| ||||||||||| ||||||||||| |||||||||||||||||  | |||||||| |||||||||||| | | | ||||||    
T  38168261 aataccaggttcgattcctaagaggaacaacgcttggccagtgc-catgcctctacgcatgagccggattagtcgttcacctttagtgggttggaaaccg 38168359  T
Q  201 gtgc 204  Q
    ||||    
T  38168360 gtgc 38168363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 3159576 - 3159518
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||||| ||| ||| ||||||||| ||||||||||||||||||||||||||    
T  3159576 aataccgggttcgacttccagggggaacaacgcttggccagtgcgcatgcctctacgca 3159518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 1446830 - 1446891
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| | ||| ||||||||  |||||||||||||||||||||||||||||    
T  1446830 aataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatga 1446891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 7246753 - 7246692
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||| |||||||||| ||||  ||||||||| |||||||||||||||||||||||||||||    
T  7246753 aatactgggttcgattcctagtgggaacaacgcttggccagtgcgcatgcctctacgcatga 7246692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 15840041 - 15839981
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| |||| || || ||||||||||||||||||||||||||||||||||    
T  15840041 aataccgggttcgattcctagaag-aataacgtttggccagtgcgcatgcctctacgcatga 15839981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 16450310 - 16450407
Alignment:
Q  108 gggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccggtgc 204  Q
    |||||||||| | ||| ||||||||| ||||||||||| |||||||||||||||||  | |||||||| | ||||||| |||| ||| ||||||||||    
T  16450310 gggttcgattcccagggggaacaacgcttggccagtgcacatgcctctacgcatgagccagattagtcgtccacctttggtaggtcggaaaccggtgc 16450407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 29895791 - 29895852
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| | ||| ||||||||  |||||||||||||||||||||||||||||    
T  29895791 aataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatga 29895852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 13073542 - 13073645
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    ||||||| |||||||| | | | ||||||| ||||||||||||||||| |||||||||||||| | |||||||| || |||||| || | ||| ||||||    
T  13073542 aataccgagttcgattcccatggggaacaatgtttggccagtgcgcatacctctacgcatgaaccagattagtcgtttacctttggtgggtcggaaaccg 13073641  T
Q  201 gtgc 204  Q
    ||||    
T  13073642 gtgc 13073645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 33647725 - 33647828
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||||||||||||| |||  |||||||| ||| ||||||| ||| |||||||||| ||| | |||||||| |||| |||| || ||||| ||||||    
T  33647725 aataccgggttcgatttccagggagaacaacgcttgaccagtgcacattcctctacgcacgaaccagattagtcgttcatctttggtggatcggaaaccg 33647824  T
Q  201 gtgc 204  Q
    ||||    
T  33647825 gtgc 33647828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 40272438 - 40272379
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcat 161  Q
    |||| ||||||||||||| | | ||||||||| |||||||||||||||||||||||||||    
T  40272438 aatatcgggttcgatttccatggggaacaacgcttggccagtgcgcatgcctctacgcat 40272379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 109 - 163
Target Start/End: Original strand, 4738629 - 4738683
Alignment:
Q  109 ggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||||| ||||||||||||| || ||||||||||||| ||||||||||||    
T  4738629 ggttcgatttccaggaggaacaacgctttgccagtgcgcatgtctctacgcatga 4738683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 203
Target Start/End: Original strand, 8889026 - 8889128
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||||||||||| ||||| ||||||||  |||| ||||||||||| ||||||||||||  | |||||||| | ||||||| || | ||| ||||||    
T  8889026 aataccgggttcgattcctagggggaacaacacttgggcagtgcgcatggctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccg 8889125  T
Q  201 gtg 203  Q
    |||    
T  8889126 gtg 8889128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 109 - 163
Target Start/End: Original strand, 20421784 - 20421838
Alignment:
Q  109 ggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||||| ||| ||||||||  |||||||||||||||||||||||||||||    
T  20421784 ggttcgatttccagggggaacaacacttggccagtgcgcatgcctctacgcatga 20421838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 47078462 - 47078520
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||||||| | ||| ||||||||| ||||||||||| ||||||||||||||    
T  47078462 aataccgggttcgattcccagggggaacaacgcttggccagtgcacatgcctctacgca 47078520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 123 - 160
Target Start/End: Complemental strand, 295619 - 295582
Alignment:
Q  123 gaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||||||||||||||||||||||||||||||||||    
T  295619 gaggaacaacgtttggccagtgcgcatgcctctacgca 295582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 16645122 - 16645183
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||||  |||| |||||||| |||||||||| |||||||||||| |||||    
T  16645122 aataccgggttcgattttcaggaagaacaacgcttggccagtgtgcatgcctctacacatga 16645183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 20354637 - 20354702
Alignment:
Q  98 gaaaaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||||| ||| |||||| |||  |||||||| ||||| |||||||||||||||||||||||    
T  20354637 gaaaaataccgagtttgatttccagggagaacaacgcttggctagtgcgcatgcctctacgcatga 20354702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 38075437 - 38075498
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||||||||||   ||| | ||||||| |||||||||||||||||||||||||||||    
T  38075437 aataccgggttcgattctcaggggaaacaacgcttggccagtgcgcatgcctctacgcatga 38075498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 14597976 - 14597904
Alignment:
Q  133 gtttggccagtgcgcatgcctctacgcatgaa-tcgattagtcattcacctttagtagatcgaaaaccggtgc 204  Q
    |||||||||||||||||||||||||||| ||| | |||||||| | |||||||  | ||||||||||||||||    
T  14597976 gtttggccagtgcgcatgcctctacgcacgaactggattagtcgtccacctttgatggatcgaaaaccggtgc 14597904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 17080070 - 17080150
Alignment:
Q  125 ggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccggtgc 204  Q
    ||||||||| |||||||||||||||||||||||||||||  | ||||||||   |||||||  | ||||||||||||||||    
T  17080070 ggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcacacctttgatggatcgaaaaccggtgc 17080150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 160
Target Start/End: Original strand, 21192645 - 21192702
Alignment:
Q  101 aaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||||||||||| |||   ||||||||||||| ||||||||||||||||||||||||    
T  21192645 aaataccgggttcgagttcc--gaggaacaacgttgggccagtgcgcatgcctctacgca 21192702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 14124020 - 14124075
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctac 157  Q
    |||||| ||||||||| | ||| |||||||| ||||||||||||||||||||||||    
T  14124020 aataccaggttcgattcccagggggaacaacatttggccagtgcgcatgcctctac 14124075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 24166454 - 24166557
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    ||||| |||||||||| | | | | |||||||||||||||||||||||||||||||||| ||  | |||||||||  |||||||  | ||||| ||||||    
T  24166454 aatactgggttcgattcccaagggaaacaacgtttggccagtgcgcatgcctctacgcacgagccagattagtcacccacctttgatggatcggaaaccg 24166553  T
Q  201 gtgc 204  Q
    ||||    
T  24166554 gtgc 24166557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 52950086 - 52950169
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcaccttt 184  Q
    |||| ||||||||||| | ||| ||||||||| |||||||||||||||| |||||| |||||| | |||||||| | |||||||    
T  52950086 aatatcgggttcgattcccagggggaacaacgcttggccagtgcgcatgactctacacatgaaccagattagtcgtccaccttt 52950169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 10541020 - 10541078
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||| ||||||||||||| ||| | ||||||| |||||||||| |||||||||||||||    
T  10541020 aatatcgggttcgatttccaggggaaacaacgcttggccagtgtgcatgcctctacgca 10541078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 40780970 - 40780865
Alignment:
Q  100 aaaataccgggttcgatt-tctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaa 197  Q
    |||||| ||||||||||| || ||| ||||||||| |||| ||||||||||||||||||||||||  | |||||||| | ||||||| || | ||| |||    
T  40780970 aaaatatcgggttcgattctcaagg-ggaacaacgcttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaa 40780872  T
Q  198 ccggtgc 204  Q
    |||||||    
T  40780871 ccggtgc 40780865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 48015180 - 48015122
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||||||| | ||  ||||||||| |||||||||||||| |||||||||||    
T  48015180 aataccgggttcgattcccagtgggaacaacgcttggccagtgcgcaagcctctacgca 48015122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 6779215 - 6779276
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| | ||| ||||||||   ||||||||||||||||||||| ||||||    
T  6779215 aataccgggttcgattcccagggggaacaacacctggccagtgcgcatgcctctatgcatga 6779276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 43468351 - 43468412
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| | ||| ||||||||| ||||||||||| |||  ||||||||||||    
T  43468351 aataccgggttcgattcccagggggaacaacgcttggccagtgcacatttctctacgcatga 43468412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 55921038 - 55921099
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| | ||| ||||||||  |||| ||||||||||||||||||| ||||    
T  55921038 aataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgtatga 55921099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 43458617 - 43458673
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacg 158  Q
    ||||| || ||||||| | |||||||| |||| ||||||||||||||||||||||||    
T  43458617 aatactggattcgattcccaggaggaagaacgcttggccagtgcgcatgcctctacg 43458673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 8064905 - 8064802
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    ||||| |||||||||| | | | |||| |||  ||| |||||||||||||||||||||||||  | |||||||| | |||| ||| ||| ||||||||||    
T  8064905 aatactgggttcgattcccaaggggaataacacttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattaataggtcgaaaaccg 8064806  T
Q  201 gtgc 204  Q
    ||||    
T  8064805 gtgc 8064802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 27248432 - 27248488
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||||| | | ||||||||||||| |||||||  |||||||||||||||||    
T  27248432 aataccgggttcgagtcccaggaggaacaacgcttggcca--gcgcatgcctctacgca 27248488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 160
Target Start/End: Original strand, 29588739 - 29588798
Alignment:
Q  101 aaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||||||||||||| | ||| | ||||| | ||||| ||||||||||||||||||||    
T  29588739 aaataccgggttcgattcccaggggaaacaaagcttggctagtgcgcatgcctctacgca 29588798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 36262872 - 36262816
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||||||| | |||  |||||||| ||||||||||| ||||||||||||||    
T  36262872 aataccgggttcgattcccagg--gaacaacgcttggccagtgcacatgcctctacgca 36262816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 160
Target Start/End: Complemental strand, 49260749 - 49260714
Alignment:
Q  125 ggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||||| ||||||||||||||||||||||||||    
T  49260749 ggaacaacgcttggccagtgcgcatgcctctacgca 49260714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 156
Target Start/End: Original strand, 8424582 - 8424612
Alignment:
Q  126 gaacaacgtttggccagtgcgcatgcctcta 156  Q
    |||||||||||||||||||||||||||||||    
T  8424582 gaacaacgtttggccagtgcgcatgcctcta 8424612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 184
Target Start/End: Original strand, 14859304 - 14859378
Alignment:
Q  111 ttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcaccttt 184  Q
    ||||||||  ||||||||||| ||||| |||||||||||| ||||||||| ||  | |||||||||| |||||||    
T  14859304 ttcgattttcaggaggaacaatgtttgaccagtgcgcatgtctctacgcacgagccagattagtcatccaccttt 14859378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 15732555 - 15732497
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||||||||||||  || | ||||||||  ||||||||||| ||||||||||||||    
T  15732555 aataccgggttcgattcatatggggaacaacacttggccagtgcacatgcctctacgca 15732497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 38166031 - 38166089
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||| ||||| |||| | ||| ||||||||| |||||||||||||||| |||||||||    
T  38166031 aatactgggttggattcccagggggaacaacgcttggccagtgcgcatggctctacgca 38166089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 163
Target Start/End: Original strand, 46108718 - 46108756
Alignment:
Q  125 ggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||| |||||| |||||||||||||||||||||||    
T  46108718 ggaacaacatttggctagtgcgcatgcctctacgcatga 46108756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 98 - 160
Target Start/End: Complemental strand, 48317386 - 48317324
Alignment:
Q  98 gaaaaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||||| || ||||||||  ||||||||||||| |||| ||||| | |||||||||||||    
T  48317386 gaaaaatactggattcgattttcaggaggaacaacgcttggtcagtgtgtatgcctctacgca 48317324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 5472930 - 5472897
Alignment:
Q  127 aacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||| ||||||||||||||||||||||||||    
T  5472930 aacaacgcttggccagtgcgcatgcctctacgca 5472897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 36145322 - 36145261
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| | ||| | ||||||| |||  |||||||||||||||||| |||||    
T  36145322 aataccgggttcgattcccaggggaaacaacgcttgatcagtgcgcatgcctctacacatga 36145261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 35359763 - 35359799
Alignment:
Q  125 ggaacaacgtttggccagtgcgcatgcctctacgcat 161  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  35359763 ggaacaacgtttgaccagtgcgcatgcctcaacgcat 35359799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 49952228 - 49952192
Alignment:
Q  127 aacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  49952228 aacaacgtttggtcagtgcgcacgcctctacgcatga 49952192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 8e-28; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 7747273 - 7747376
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||  | |||||||| |||||||||||| | ||| ||||||    
T  7747273 aataccgggttcgattcctaggaggaacaacgtttggccagtgtgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccg 7747372  T
Q  201 gtgc 204  Q
    ||||    
T  7747373 gtgc 7747376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 41220634 - 41220737
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatcg-attagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||  || ||||||| |||||||||||| | ||| ||||||    
T  41220634 aataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccgaattagtcgttcacctttagtgggtcggaaaccg 41220733  T
Q  201 gtgc 204  Q
    ||||    
T  41220734 gtgc 41220737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 38962762 - 38962845
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcaccttt 184  Q
    |||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||| | |||||||| | |||||||    
T  38962762 aataccgggttcgattttcaggaggaacaacgcttggccagtgcgcatgcctctacgcatgaaccggattagtcgtccaccttt 38962845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 3643994 - 3643933
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  3643994 aataccgggtttgatttctacgaggaacaacgcttggccagtgcgcatgcctctacgcatga 3643933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 10026725 - 10026662
Alignment:
Q  100 aaaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||    
T  10026725 aaaataccgggttcgattctcagggggaacaacgtttggccagtgcgcatgcctctacgcatga 10026662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 25540511 - 25540408
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    ||||| |||||||||| ||||| ||||||||| |||||||||||||||||||||||||| ||  | |||||||| | ||||||| || | ||| ||||||    
T  25540511 aatactgggttcgattcctagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaaccg 25540412  T
Q  201 gtgc 204  Q
    ||||    
T  25540411 gtgc 25540408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 184
Target Start/End: Complemental strand, 39806992 - 39806909
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcaccttt 184  Q
    |||||||||||||||| | | ||| ||||||||||||||||||||||||||||||| || || || |||||||||| |||||||    
T  39806992 aataccgggttcgattcccaagagaaacaacgtttggccagtgcgcatgcctctacacacgagtcggattagtcatccaccttt 39806909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 10823059 - 10823117
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||||||| |||| | ||||||||||||| ||||||||||||||||||||||||||    
T  10823059 aataccgggtttgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgca 10823117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 203
Target Start/End: Complemental strand, 6358258 - 6358156
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||| | ||||||||| ||| ||||||||  |||||||||||||||||||||||||||||  | |||||||| | |||| || || | ||||||||||    
T  6358258 aataccagattcgatttccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcgaaaaccg 6358159  T
Q  201 gtg 203  Q
    |||    
T  6358158 gtg 6358156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 9360855 - 9360797
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||| ||||||||| ||||  | ||||||||||||||||||||||||||||||||||    
T  9360855 aataccaggttcgattactagaggaaacaacgtttggccagtgcgcatgcctctacgca 9360797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 11069877 - 11069935
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||| ||||||||| | ||| ||||||||||||||||||||||||| ||||||||||    
T  11069877 aataccaggttcgattccgagggggaacaacgtttggccagtgcgcatacctctacgca 11069935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 12455309 - 12455367
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||||||||| ||| | ||||||| || |||||||||||||||||||||||    
T  12455309 aataccgggttcgatttccaggggaaacaacgcttagccagtgcgcatgcctctacgca 12455367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 44139483 - 44139541
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||||||| | ||| ||||||||| ||||||||||||| ||||||||||||    
T  44139483 aataccgggttcgattcccagggggaacaacgcttggccagtgcgcgtgcctctacgca 44139541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 45263774 - 45263716
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||||||| | ||  ||||||||| ||||||||||||||||||||||||||    
T  45263774 aataccgggttcgattcccagagggaacaacgcttggccagtgcgcatgcctctacgca 45263716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 331500 - 331561
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| | ||| ||||||||  ||||||||||||||||| |||||||||||    
T  331500 aataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcttctacgcatga 331561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 13026518 - 13026457
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||| |||||||||||   ||||||||||| | |||||||||||||||||||||||||||||    
T  13026518 aatatcgggttcgattatcaggaggaacaatgattggccagtgcgcatgcctctacgcatga 13026457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 34356205 - 34356266
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||||| ||| ||||||||  |||| ||||||||||||||||| ||||||    
T  34356205 aataccgggttcgatttccagggggaacaacacttggtcagtgcgcatgcctctatgcatga 34356266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 184
Target Start/End: Complemental strand, 3849030 - 3848938
Alignment:
Q  93 tatctgaaaaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcaccttt 184  Q
    |||||| | ||||||||||||||||   ||| | |||||||||||||||| ||||||| ||||||||| || || |||||||| |||||||||    
T  3849030 tatctggagaataccgggttcgattatcaggggaaacaacgtttggccagggcgcatgtctctacgcacgagtcggattagtcgttcaccttt 3848938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 7787055 - 7787158
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||||||||||||| ||| |||||||   ||||||||| |||||||||||||||| ||  | ||||||||   || |||| || ||||||||||||    
T  7787055 aataccgggttcgatttccagggggaacaatacttggccagtacgcatgcctctacgcacgagccggattagtcgcccatctttggtggatcgaaaaccg 7787154  T
Q  201 gtgc 204  Q
    ||||    
T  7787155 gtgc 7787158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 19976914 - 19976855
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcat 161  Q
    |||||||||||||||||  ||| |||| ||||||||| ||||||||||| ||||||||||    
T  19976914 aataccgggttcgattttcagggggaataacgtttggtcagtgcgcatgtctctacgcat 19976855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 25604592 - 25604654
Alignment:
Q  100 aaaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||| ||||||||| ||| ||||||||||||| |||||  ||||||||||||||||||    
T  25604592 aaaataccggattcgatttccagg-ggaacaacgtttgaccagtatgcatgcctctacgcatga 25604654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 125 - 203
Target Start/End: Complemental strand, 39201592 - 39201513
Alignment:
Q  125 ggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccggtg 203  Q
    ||||||| |||||||||||| ||||||||||||||||||  | |||||||| ||||||||| || | ||| |||||||||    
T  39201592 ggaacaatgtttggccagtgtgcatgcctctacgcatgagccggattagtcgttcacctttggtgggtcggaaaccggtg 39201513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 40969022 - 40968963
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcat 161  Q
    |||||||||||||||||| |||   |||||||||||| ||||||| ||||||||||||||    
T  40969022 aataccgggttcgatttccagggaaaacaacgtttggtcagtgcgaatgcctctacgcat 40968963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 8410130 - 8410188
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||| ||||||||||| | ||| ||||||||  ||||||||||||||||||||||||||    
T  8410130 aatatcgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgca 8410188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 21286443 - 21286501
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||||||| | ||| | ||||||| ||| ||||||||||||||||||||||    
T  21286443 aataccgggttcgattcccaggcgaaacaacgcttgaccagtgcgcatgcctctacgca 21286501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 163
Target Start/End: Original strand, 24179590 - 24179628
Alignment:
Q  125 ggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  24179590 ggaacaacgtttggccagtgcacatgcctctacgcatga 24179628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 2550867 - 2550928
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||| ||||||||||| | ||||||||||||  || ||||||||||||| ||||||||||||    
T  2550867 aatatcgggttcgattcccaggaggaacaacacttagccagtgcgcatgtctctacgcatga 2550928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 104 - 204
Target Start/End: Original strand, 10669593 - 10669694
Alignment:
Q  104 taccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccggt 202  Q
    ||||||||| |||| | |||  |||||||| |||||||||||||||| ||||||||| || || ||||| || ||||||||| || | ||| ||||||||    
T  10669593 taccgggtttgattcccagggagaacaacgcttggccagtgcgcatgtctctacgcacgagtcggattaatcgttcacctttggtgggtcggaaaccggt 10669692  T
Q  203 gc 204  Q
    ||    
T  10669693 gc 10669694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 12864223 - 12864284
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||| ||||||||| ||| ||||||||  |||| |||||||||||||||| |||||||    
T  12864223 aataccggattcgatttccagggggaacaacacttggtcagtgcgcatgcctctgcgcatga 12864284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 13104908 - 13104871
Alignment:
Q  126 gaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||| |||||||||||||||||||||||||||||    
T  13104908 gaacaacgcttggccagtgcgcatgcctctacgcatga 13104871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 18649133 - 18649072
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||| |||||||   |||||||||||  ||||| ||||||||||||||||||||||||    
T  18649133 aataccggattcgattctcaggaggaacaatatttgggcagtgcgcatgcctctacgcatga 18649072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 22593142 - 22593194
Alignment:
Q  110 gttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||| | ||| ||||||||||| |||||||||||||||||||||||||||    
T  22593142 gttcgattcccagggggaacaacgtt-ggccagtgcgcatgcctctacgcatga 22593194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 38005401 - 38005462
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||| |||||||||| | | | ||||||||| ||||||||||||||||||||||| |||||    
T  38005401 aatactgggttcgattcccaaggggaacaacgcttggccagtgcgcatgcctctacacatga 38005462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 20116702 - 20116658
Alignment:
Q  119 ctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||  |||||| |||||||||||||||||||||    
T  20116702 ctaggaggaacaacgcatggccaatgcgcatgcctctacgcatga 20116658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 26805314 - 26805394
Alignment:
Q  121 aggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    ||||| ||| ||||||||||||||| ||||||||||||||||| || ||||||||   ||||||| || | ||||||||||    
T  26805314 aggagaaacgacgtttggccagtgcacatgcctctacgcatgagtcggattagtcgcccacctttggtggctcgaaaaccg 26805394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 160
Target Start/End: Complemental strand, 2149278 - 2149243
Alignment:
Q  125 ggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||| |||||||||||||||||||||||||||||||    
T  2149278 ggaataacgtttggccagtgcgcatgcctctacgca 2149243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 160
Target Start/End: Original strand, 27725958 - 27725997
Alignment:
Q  121 aggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||||||| | ||||||||||||||||||||||||||    
T  27725958 aggaggaacaatgcttggccagtgcgcatgcctctacgca 27725997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 160
Target Start/End: Original strand, 29653625 - 29653684
Alignment:
Q  101 aaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||||| ||||||||| |||   ||||||| |||| |||||||||||||||||||||    
T  29653625 aaataccggattcgatttccagggaaaacaacgcttgggcagtgcgcatgcctctacgca 29653684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 160
Target Start/End: Original strand, 37560195 - 37560230
Alignment:
Q  125 ggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||||| |||||||||||||||||||||    
T  37560195 ggaacaacgtttggtcagtgcgcatgcctctacgca 37560230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 160
Target Start/End: Complemental strand, 41032010 - 41031955
Alignment:
Q  105 accgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||||||||| | ||| ||||||||  |||||||||| |||||||||||||||    
T  41032010 accgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgca 41031955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 160
Target Start/End: Complemental strand, 42770759 - 42770700
Alignment:
Q  101 aaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||||||||| |||   ||| ||||||||| ||||||||||||||||||||| ||||    
T  42770759 aaataccgggttcaattctcagggggaacaacgcttggccagtgcgcatgcctcttcgca 42770700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 15079482 - 15079540
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||| |||||||||||| ||| ||||||||| ||| |||||| ||||| |||||||||    
T  15079482 aatacagggttcgatttccagggggaacaacgcttgaccagtgtgcatgactctacgca 15079540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 20612643 - 20612581
Alignment:
Q  102 aataccgggttcgatttctaggagg-aacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||||||||||   |||||| ||||||  |||||||||||||||||||||| ||||||    
T  20612643 aataccgggttcgattctcaggagggaacaacacttggccagtgcgcatgcctctatgcatga 20612581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 163
Target Start/End: Original strand, 33005773 - 33005811
Alignment:
Q  125 ggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  33005773 ggaacaacacttggccagtgcgcatgcctctacgcatga 33005811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 35946738 - 35946795
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||| |||||||| ||||| ||||||||| ||||||| || |||||||||||||||    
T  35946738 aataccgagttcgattcctagg-ggaacaacgcttggccattgtgcatgcctctacgca 35946795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 41187699 - 41187769
Alignment:
Q  93 tatctgaaaaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||| ||||||||||||||||   ||| ||||||||  ||| ||||||  |||||||||||||||||    
T  41187699 tatctgaagaataccgggttcgattatgagggggaacaacacttgaccagtgtccatgcctctacgcatga 41187769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 44945613 - 44945695
Alignment:
Q  123 gaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccggtgc 204  Q
    ||||||||||| ||||  |||||||||||||||||||| ||  | ||||||||   |||||||||| ||||| ||||||||||    
T  44945613 gaggaacaacgcttggatagtgcgcatgcctctacgcacgagccggattagtcgcccacctttagtggatcggaaaccggtgc 44945695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 16325602 - 16325655
Alignment:
Q  110 gttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||| | ||| ||||||||  |||||||||| ||||||||||||||||||    
T  16325602 gttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcatga 16325655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 157
Target Start/End: Complemental strand, 2528445 - 2528393
Alignment:
Q  105 accgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctac 157  Q
    ||||||||||||| | ||| ||||||||| |||| ||||| ||||||||||||    
T  2528445 accgggttcgattcccagggggaacaacgcttggtcagtgtgcatgcctctac 2528393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 16034936 - 16034992
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacg 158  Q
    |||||||||||||||||  ||| ||||||||| ||| |||||| |||||||| ||||    
T  16034936 aataccgggttcgattttcaggcggaacaacgcttgaccagtgtgcatgcctatacg 16034992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 28525554 - 28525478
Alignment:
Q  111 ttcgatttctaggaggaa-caacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcaccttta 185  Q
    ||||||||| ||| |||| ||||  |||||||||||||||||||||||||| ||  | |||||||||| ||||||||    
T  28525554 ttcgatttccagggggaaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcatccaccttta 28525478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 29421285 - 29421347
Alignment:
Q  104 taccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatcga 168  Q
    ||||||||| |||||| ||| ||||||||| |||| ||||| |||||||||||||||||| ||||    
T  29421285 taccgggtttgatttc-agg-ggaacaacgcttgggcagtgagcatgcctctacgcatgagtcga 29421347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 34346371 - 34346291
Alignment:
Q  125 ggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccggtgc 204  Q
    ||||||||  |||||||||| |||||||||||||||||| || ||||| ||  |||||||| || | ||| ||||||||||    
T  34346371 ggaacaacacttggccagtgtgcatgcctctacgcatgagtcagattaatcgctcacctttggtgggtcggaaaccggtgc 34346291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 41187873 - 41187909
Alignment:
Q  127 aacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||| ||| |||||||||||||||||||||||||    
T  41187873 aacaacgcttgaccagtgcgcatgcctctacgcatga 41187909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 10927609 - 10927708
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||  | |||||||| |||||||||||| | ||| ||||||    
T  10927609 aataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccg 10927708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 6100475 - 6100574
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||||||||||| | ||||||||||||| |||||||||||||||||| ||||||||||  | |||||||| |||||||||||| | ||||||||||    
T  6100475 aataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgccactacgcatgagccggattagtcgttcacctttagtgggtcgaaaaccg 6100574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 1013084 - 1012985
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatcg-attagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||||||||||| | ||| ||||||||| ||||||||| | |||||||||||||||||  || |||| || |||||||||||| ||||||||||||    
T  1013084 aataccgggttcgattcccagggggaacaacgcttggccagtacacatgcctctacgcatgagccgaattaatcgttcacctttagtggatcgaaaaccg 1012985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 3418620 - 3418517
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||| |||||||||||| |||||||||||||  ||||||||||||||||| ||||||||||| || |||||||| | |||||||||| | ||  ||||||    
T  3418620 aatatcgggttcgatttttaggaggaacaacacttggccagtgcgcatgcgtctacgcatgagtcagattagtcgtccacctttagtgggtcagaaaccg 3418521  T
Q  201 gtgc 204  Q
    ||||    
T  3418520 gtgc 3418517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 8141105 - 8141166
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||||| ||| | ||||||| |||||||||||||||||||||||||||||    
T  8141105 aataccgggttcgatttccaggggaaacaacgcttggccagtgcgcatgcctctacgcatga 8141166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 163
Target Start/End: Original strand, 583816 - 583876
Alignment:
Q  101 aaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||||||||||| |||||  |||||||| ||| |||||||||||||||||||||||||    
T  583816 aaataccgggttcgattcctagg--gaacaacgcttgaccagtgcgcatgcctctacgcatga 583876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 4479402 - 4479300
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga-atcgattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||| ||||||| | ||| ||||||||| |||||||||||||||||||||||||||||  | |||||||| | ||||||| || | ||| ||||||    
T  4479402 aataccggattcgattcccagg-ggaacaacgcttggccagtgcgcatgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaaccg 4479304  T
Q  201 gtgc 204  Q
    ||||    
T  4479303 gtgc 4479300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 44893385 - 44893327
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||| ||||||||| ||||||| | |||||||||| |||||||||||||||    
T  44893385 aataccgggttcaatttctagggggaacaatgcttggccagtgtgcatgcctctacgca 44893327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 2467225 - 2467164
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||||| ||| ||||||||  |||||||||||||||| ||||| ||||||    
T  2467225 aataccgggttcgatttccagggggaacaactcttggccagtgcgcatgtctctatgcatga 2467164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 202
Target Start/End: Complemental strand, 24938669 - 24938568
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||| ||||||||||||||  | ||||||  |||| || |||||||||||||||||||||| | |||||||||| |||||||  | ||||| ||||||    
T  24938669 aataccaggttcgatttctagatgaaacaacacttggtcaatgcgcatgcctctacgcatgaaccggattagtcatccacctttgatggatcggaaaccg 24938570  T
Q  201 gt 202  Q
    ||    
T  24938569 gt 24938568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 43027308 - 43027369
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||| |||||||||| | ||||||||||||| ||| ||| |||||||||||||||||||||    
T  43027308 aatactgggttcgattcccaggaggaacaacgattgtccaatgcgcatgcctctacgcatga 43027369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 8997651 - 8997548
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    ||||||| |||||||| ||| | |||||||||||| |||||| ||||||||| |||||||||  | |||||||| |||| |||| || | ||| ||||||    
T  8997651 aataccgtgttcgattcctaaggggaacaacgtttcgccagttcgcatgcctatacgcatgagccagattagtcgttcatctttggtgggtcggaaaccg 8997552  T
Q  201 gtgc 204  Q
    ||||    
T  8997551 gtgc 8997548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 192
Target Start/End: Complemental strand, 33401906 - 33401815
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatc 192  Q
    |||||||||||||||||  ||| ||||||||  ||| |||||| |||||||||||||||||| || ||||||||   |||||||||| ||||    
T  33401906 aataccgggttcgattttcagggggaacaacacttgaccagtgtgcatgcctctacgcatgagtcggattagtcgcccacctttagtggatc 33401815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 14666178 - 14666120
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||||||| | ||| | ||||||  ||||||||||||||||||||||||||    
T  14666178 aataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctctacgca 14666120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 34613885 - 34613831
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctcta 156  Q
    |||| ||||||||||| | |||||||||||||| |||||||| ||||||||||||    
T  34613885 aatatcgggttcgattcccaggaggaacaacgtctggccagtacgcatgcctcta 34613831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 38922521 - 38922463
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||||||| | ||  ||||||||| ||||||||||||||||||| ||||||    
T  38922521 aataccgggttcgattcccagagggaacaacgcttggccagtgcgcatgcctttacgca 38922463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 202
Target Start/End: Original strand, 3692864 - 3692937
Alignment:
Q  130 aacgtttggccagtgcgcatgcctctacgcatgaatcg-attagtcattcacctttagtagatcgaaaaccggt 202  Q
    ||||||||| |||||||||| |||||||||||||  || |||| || ||||||||| |||| ||||||||||||    
T  3692864 aacgtttggtcagtgcgcatacctctacgcatgagccgaattaatcgttcacctttggtaggtcgaaaaccggt 3692937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 6042824 - 6042885
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| | | | ||||||||| |||||||||||||||||||  ||||||||    
T  6042824 aataccgggttcgattcccaaggggaacaacgcttggccagtgcgcatgcctaaacgcatga 6042885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 9860102 - 9860041
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| | ||| ||||||||  |||||||||| |||||||||||| |||||    
T  9860102 aataccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacacatga 9860041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 33935842 - 33935781
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||| ||||||| |||||  |||||||  ||||||||||||||||||| |||||||||    
T  33935842 aataccggattcgattcctagggagaacaacacttggccagtgcgcatgcctatacgcatga 33935781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 149
Target Start/End: Original strand, 6940544 - 6940608
Alignment:
Q  85 caaggagctatctgaaaaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcat 149  Q
    ||||||| |||| | |||||| ||||||||||||| ||| ||||||||| ||||| |||||||||    
T  6940544 caaggaggtatccggaaaatatcgggttcgatttccaggtggaacaacgcttggctagtgcgcat 6940608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 13359023 - 13359083
Alignment:
Q  100 aaaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||||||||||||||   || |||||||||| |||| |||||||||| ||||||||||    
T  13359023 aaaataccgggttcgattctcagaaggaacaacgcttggacagtgcgcatacctctacgca 13359083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 204
Target Start/End: Original strand, 18374012 - 18374116
Alignment:
Q  101 aaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaacc 199  Q
    ||||||| |||||||||   |||  |||||||| ||| |||||||||||||||||||||||||  | |||||||| | || |||| || | |||||||||    
T  18374012 aaataccaggttcgattctcagggagaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccaactttggtgggtcgaaaacc 18374111  T
Q  200 ggtgc 204  Q
    |||||    
T  18374112 ggtgc 18374116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 43032903 - 43032959
Alignment:
Q  101 aaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctac 157  Q
    ||||| ||| ||||||| | ||| ||||||||| |||||||||||||||||||||||    
T  43032903 aaatatcggattcgattcccagggggaacaacgcttggccagtgcgcatgcctctac 43032959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 160
Target Start/End: Original strand, 17981443 - 17981502
Alignment:
Q  101 aaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||||||||||||| | ||| ||||||||  ||| |||||| |||||||||||||||    
T  17981443 aaataccgggttcgattcccagggggaacaactcttgaccagtgtgcatgcctctacgca 17981502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 2964079 - 2964137
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||| |||||||| | | ||||||||||| ||||||| || |||||||||||||||    
T  2964079 aataccgtgttcgattccgatgaggaacaacgcttggccaatgtgcatgcctctacgca 2964137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 163
Target Start/End: Complemental strand, 8587023 - 8586985
Alignment:
Q  125 ggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||| ||||||||||||||| |||||||||||||    
T  8587023 ggaacaacgcttggccagtgcgcatacctctacgcatga 8586985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 15884662 - 15884605
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||||||| | ||| ||||||||  ||||| ||||||||||||||||||||    
T  15884662 aataccgggttcgattcccagg-ggaacaacacttggcaagtgcgcatgcctctacgca 15884605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 20240581 - 20240631
Alignment:
Q  110 gttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||| ||||  || ||||||||| |||||||||||||||||||||    
T  20240581 gttcgatttccaggaaaaataacgtttggtcagtgcgcatgcctctacgca 20240631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 20252486 - 20252436
Alignment:
Q  110 gttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||| ||||  || ||||||||| |||||||||||||||||||||    
T  20252486 gttcgatttccaggaaaaataacgtttggtcagtgcgcatgcctctacgca 20252436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 163
Target Start/End: Original strand, 26570926 - 26570988
Alignment:
Q  101 aaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||| ||||||| ||| ||||| ||||||||| |||||||||| | |||| |||||||||||    
T  26570926 aaatatcgggttcaattcctagggggaacaacgcttggccagtgtgtatgcatctacgcatga 26570988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 11785919 - 11785979
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||| ||||||| | ||| ||| |||||||||| ||||| ||||||||||||||||||    
T  11785919 aataccggattcgattccaagg-ggagcaacgtttgggcagtgtgcatgcctctacgcatga 11785979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 14846579 - 14846639
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||||||||||   ||| ||||||| | |||| ||||||||||||||||||||||||    
T  14846579 aataccgggttcgattctcagg-ggaacaatgattggtcagtgcgcatgcctctacgcatga 14846639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 18091428 - 18091461
Alignment:
Q  127 aacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||||||| ||||||||||||||||||||||    
T  18091428 aacaacgtttgaccagtgcgcatgcctctacgca 18091461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 45521172 - 45521232
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| | ||| ||||||||  |||  ||||||||||||||||||||||||    
T  45521172 aataccgggttcgattcccagg-ggaacaacacttgatcagtgcgcatgcctctacgcatga 45521232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 160
Target Start/End: Complemental strand, 7673746 - 7673706
Alignment:
Q  120 taggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||| ||||||||||||||| |||| |||||||||||||||    
T  7673746 tagggggaacaacgtttggctagtgtgcatgcctctacgca 7673706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 21898651 - 21898754
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||  | |||||||| |||||||||||| | ||| ||||||    
T  21898651 aataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccg 21898750  T
Q  201 gtgc 204  Q
    ||||    
T  21898751 gtgc 21898754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 29444871 - 29444811
Alignment:
Q  103 ataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  29444871 ataccgggttcgatttctagggggaacaacgcttggccagtgcgcatgcctctacgcatga 29444811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 29333245 - 29333185
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  29333245 aataccgggttcgatttccagg-ggaacaacgtttggccagtgcgcatgcctctacgcatga 29333185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 33859427 - 33859367
Alignment:
Q  101 aaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcat 161  Q
    |||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||    
T  33859427 aaataccgggttcgatttttagggggaacaacgtttgcccagtgcgcatgcctctacgcat 33859367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 12606433 - 12606491
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||| | ||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  12606433 aataccagattcgatttccagggggaacaacgtttggccagtgcgcatgcctctacgca 12606491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 5253330 - 5253269
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| | ||| ||||||||  |||||||||||||||||||||||||||||    
T  5253330 aataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatga 5253269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 14107465 - 14107404
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| | ||||||||||||| ||| ||||||| |||||||||||||||||    
T  14107465 aataccgggttcgattcccaggaggaacaacgcttgaccagtgcacatgcctctacgcatga 14107404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 13584557 - 13584497
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatg 162  Q
    |||||| ||||||||| ||| || ||||||||||||||||||||||||||||||| |||||    
T  13584557 aataccaggttcgattcctaagatgaacaacgtttggccagtgcgcatgcctctatgcatg 13584497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 8612081 - 8612019
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaa 164  Q
    |||||||||||||||| | ||||||||||||| ||| |||||| |||||| ||||||||||||    
T  8612081 aataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttctacgcatgaa 8612019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 8888910 - 8888983
Alignment:
Q  127 aacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaacc 199  Q
    ||||||||||||||||||||||| ||||||||||||| || |||||||| | |||||||  | |||||||||||    
T  8888910 aacaacgtttggccagtgcgcatacctctacgcatgagtcggattagtcgtccacctttgatggatcgaaaacc 8888983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 13036111 - 13036050
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||| ||||||||||||  ||| ||||||||  |||||||||||||||||||||||||||||    
T  13036111 aatatcgggttcgattttcagggggaacaacacttggccagtgcgcatgcctctacgcatga 13036050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 9366523 - 9366472
Alignment:
Q  109 ggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||| |||| |||| |||| ||||||||||||||||||||||||||    
T  9366523 ggttcgatttttagggggaataacgcttggccagtgcgcatgcctctacgca 9366472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 3588052 - 3587990
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaa 164  Q
    |||||||||||||||| | | | ||||||||| ||||||||||| ||| ||||||||||||||    
T  3588052 aataccgggttcgattcccaaggggaacaacgcttggccagtgcacatacctctacgcatgaa 3587990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 375069 - 375020
Alignment:
Q  114 gatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||| || |||||| ||||||||||||||||||||||||||| ||||||    
T  375069 gatttttaagaggaataacgtttggccagtgcgcatgcctctatgcatga 375020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 163
Target Start/End: Original strand, 5029844 - 5029881
Alignment:
Q  126 gaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  5029844 gaacaacgtttggtcagtgcgcatgcctctacgcatga 5029881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 8932664 - 8932725
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||| ||||||||||| | ||| ||||||||  ||||| |||||||||||||||||||||||    
T  8932664 aatatcgggttcgattcccagggggaacaacacttggctagtgcgcatgcctctacgcatga 8932725  T

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Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 8944130 - 8944191
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||| ||||||||||| | ||| ||||||||  ||||| |||||||||||||||||||||||    
T  8944130 aatatcgggttcgattcccagggggaacaacacttggctagtgcgcatgcctctacgcatga 8944191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 34954726 - 34954665
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||| |||||||||   ||| ||||||||||||||||||||| ||| |||||||||||||    
T  34954726 aataccaggttcgattctcagggggaacaacgtttggccagtgcacatacctctacgcatga 34954665  T

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Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 11142631 - 11142667
Alignment:
Q  127 aacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||||| |||||||||||||||||||||||||    
T  11142631 aacaacgtttgaccagtgcgcatgcctctacgcatga 11142667  T

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Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 160
Target Start/End: Original strand, 13391312 - 13391347
Alignment:
Q  125 ggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||| ||||||||||||||||||||||||||||    
T  13391312 ggaacaatgtttggccagtgcgcatgcctctacgca 13391347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 156
Target Start/End: Complemental strand, 30788937 - 30788906
Alignment:
Q  125 ggaacaacgtttggccagtgcgcatgcctcta 156  Q
    ||||||||||||||||||||||||||||||||    
T  30788937 ggaacaacgtttggccagtgcgcatgcctcta 30788906  T

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Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 143
Target Start/End: Complemental strand, 2105198 - 2105156
Alignment:
Q  101 aaataccgggttcgatttctaggaggaacaacgtttggccagt 143  Q
    ||||||||||||||||||||||| | ||||||| |||||||||    
T  2105198 aaataccgggttcgatttctaggggaaacaacgcttggccagt 2105156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 160
Target Start/End: Complemental strand, 9633708 - 9633674
Alignment:
Q  126 gaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||| ||||||||||||||||||||||||||    
T  9633708 gaacaacgcttggccagtgcgcatgcctctacgca 9633674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 13468936 - 13468994
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||| ||||| ||| ||||| ||||||||| |||| |||||| ||||||||||||||    
T  13468936 aataccaggttcaattcctagggggaacaacgattggtcagtgcacatgcctctacgca 13468994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 6606204 - 6606143
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||||||||||   ||| ||||||||  ||||||||||  |||||||||||||||||    
T  6606204 aataccgggttcgattctcagggggaacaacacttggccagtgtacatgcctctacgcatga 6606143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 10396486 - 10396550
Alignment:
Q  111 ttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtca 175  Q
    |||||||| |||| |||||||||||||||||||||||||  ||||| |||||| || |||||||||    
T  10396486 ttcgatttttagg-ggaacaacgtttggccagtgcgcatatctctatgcatgagtcggattagtca 10396550  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 17114995 - 17114943
Alignment:
Q  111 ttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||| |||| |||||||||| ||||||| ||  |||||||||||||||||    
T  17114995 ttcgattcctagaaggaacaacgcttggccaatggacatgcctctacgcatga 17114943  T

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Target: chr5 (Bit Score: 56; Significance: 5e-23; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 5732027 - 5731924
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||||||||||| | ||||||||||||| |||||||||||||||||||||||| ||||  | |||||||| |||||||||||| | ||| ||||||    
T  5732027 aataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgtatgagccagattagtcgttcacctttagtgggtcggaaaccg 5731928  T
Q  201 gtgc 204  Q
    ||||    
T  5731927 gtgc 5731924  T

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Target: chr5; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 111 - 204
Target Start/End: Original strand, 40117424 - 40117518
Alignment:
Q  111 ttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccggtgc 204  Q
    ||||||||| ||| ||||||||| |||||||||||||||||||||||||||||  | ||||| || ||||||||| || ||||||||||||||||    
T  40117424 ttcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattaatcgttcacctttggtggatcgaaaaccggtgc 40117518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 101 - 163
Target Start/End: Complemental strand, 11845909 - 11845847
Alignment:
Q  101 aaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||    
T  11845909 aaatatcgggttcgatttcgagggggaacaacgtttggccagtgcgcatgcctctacgtatga 11845847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 9805004 - 9805065
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| | ||| ||||||||| |||||||||||||||||||||||||||||    
T  9805004 aataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatga 9805065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 64 - 160
Target Start/End: Original strand, 21149696 - 21149792
Alignment:
Q  64 aagttgtttggactctagtgacaaggagctatctgaaaaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||||||||||| |||| ||||||  ||| |||  |||||| ||||||||||  ||| ||||||||||||| |||||||||||| |||||||||    
T  21149696 aagttgtttggactccagtggcaaggacgtatttgaggaataccaggttcgattttcagggggaacaacgtttgaccagtgcgcatgactctacgca 21149792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 42086327 - 42086430
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||||||||||| | ||| ||||||||| ||| |||||||||||||||||||||||||  | |||||||| | ||||||| || | ||| ||||||    
T  42086327 aataccgggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccg 42086426  T
Q  201 gtgc 204  Q
    ||||    
T  42086427 gtgc 42086430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 7866581 - 7866639
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||||||| | ||||||||||||| |||||||||| |||||||||||||||    
T  7866581 aataccgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcctctacgca 7866639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 9812872 - 9812934
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaa 164  Q
    |||||||||||||||| | ||||||||||||| |||||||||| |||||| ||||||||||||    
T  9812872 aataccgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcttctacgcatgaa 9812934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 38897825 - 38897768
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||    
T  38897825 aataccgggttcgatttccagg-ggaacaacgcttggccagtgcgcatgcctctacgca 38897768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 1538431 - 1538492
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| | ||| ||||||||  |||||||||||||||||||||||||||||    
T  1538431 aataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatga 1538492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 23383657 - 23383718
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| | ||| ||||||||| ||||||||||||| |||||||||||||||    
T  23383657 aataccgggttcgattcccagggggaacaacgcttggccagtgcgcttgcctctacgcatga 23383718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 28857128 - 28857189
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| | ||| ||||||||  |||||||||||||||||||||||||||||    
T  28857128 aataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatga 28857189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 30349579 - 30349640
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||||| |||||||||| ||||||| | |||||||||||||||||||||| ||||||    
T  30349579 aataccgggtttgatttctagggggaacaatgattggccagtgcgcatgcctctatgcatga 30349640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 3654019 - 3653918
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||||||||||| ||||   |||||||| ||| |||||||||||||||||||||| ||  | |||||||| | ||||||| || ||||||||||||    
T  3654019 aataccgggttcgattcctaga--gaacaacgcttgaccagtgcgcatgcctctacgcacgaggcggattagtcgtccacctttggtggatcgaaaaccg 3653922  T
Q  201 gtgc 204  Q
    ||||    
T  3653921 gtgc 3653918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 25417290 - 25417234
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacg 158  Q
    |||||||||||||||| | ||| ||||||||| ||||||||||||||||||||||||    
T  25417290 aataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacg 25417234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 31890089 - 31890144
Alignment:
Q  101 aaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctcta 156  Q
    ||||||||  ||||||||||||||||||||||||||| ||||||| ||||||||||    
T  31890089 aaataccgaattcgatttctaggaggaacaacgtttgaccagtgcacatgcctcta 31890144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 9168339 - 9168257
Alignment:
Q  123 gaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccggtgc 204  Q
    ||||||||||| ||||||||||||||| |||||||||||||  | |||||||| | |||||||||| | ||||||| ||||||    
T  9168339 gaggaacaacgcttggccagtgcgcatacctctacgcatgagccggattagtcgtccacctttagtgggtcgaaaatcggtgc 9168257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 12705014 - 12705076
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaa 164  Q
    |||||||||||||||| | ||||||||||||| ||| |||||| |||||| ||||||||||||    
T  12705014 aataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttctacgcatgaa 12705076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 12766131 - 12766193
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaa 164  Q
    ||||||||||||||||   ||||||||||| | |||||||||| |||||||||||||||||||    
T  12766131 aataccgggttcgattctgaggaggaacaatgcttggccagtgtgcatgcctctacgcatgaa 12766193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 14588724 - 14588663
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||| ||||||||||||  |||||||| |||| ||| |||||||||||||||||||||||||    
T  14588724 aatatcgggttcgattttcaggaggaataacgcttgaccagtgcgcatgcctctacgcatga 14588663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 19572724 - 19572785
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||||| |||| | ||| ||||||||  |||||||||||||||||||||||||||||    
T  19572724 aataccgggttagattcccagggggaacaacacttggccagtgcgcatgcctctacgcatga 19572785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 41163566 - 41163506
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| | ||| ||||||||||||||||||||| |||| ||||||||||||    
T  41163566 aataccgggttcgattcccagg-ggaacaacgtttggccagtgcacatgtctctacgcatga 41163506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 20682718 - 20682666
Alignment:
Q  108 gggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||| |||||| ||| ||||||||| ||||||||||||||||||||||||||    
T  20682718 gggttagatttccagggggaacaacgcttggccagtgcgcatgcctctacgca 20682666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 8513519 - 8513622
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||||||||||| ||||| | ||||| | ||||||||||| |||||||||||||| ||  | |||||||| | ||||||| || | ||| ||||||    
T  8513519 aataccgggttcgattcctaggggaaacaatgcttggccagtgcacatgcctctacgcacgagccagattagtcgtccacctttggtgggtcggaaaccg 8513618  T
Q  201 gtgc 204  Q
    ||||    
T  8513619 gtgc 8513622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 20525838 - 20525941
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||| ||||||||||| | ||| ||||||||  || ||||||||||||||||||||||||||  | |||||||| | |||| || || ||||| ||||||    
T  20525838 aatatcgggttcgattcccaggtggaacaacacttcgccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtggatcggaaaccg 20525937  T
Q  201 gtgc 204  Q
    ||||    
T  20525938 gtgc 20525941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 1899001 - 1899050
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgc 151  Q
    |||||||||||||||| | ||| ||||||||| |||||||||||||||||    
T  1899001 aataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgc 1899050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 7308471 - 7308410
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||| ||||||||||| | ||| ||||||||| |||| |||||| |||||||||||||||||    
T  7308471 aatatcgggttcgattcccagggggaacaacgcttgggcagtgcacatgcctctacgcatga 7308410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 13664260 - 13664321
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||| |||||||   ||| ||||||||  |||||||||||||||||||||||||||||    
T  13664260 aataccggattcgattatcagggggaacaacacttggccagtgcgcatgcctctacgcatga 13664321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 110 - 155
Target Start/End: Original strand, 21487625 - 21487670
Alignment:
Q  110 gttcgatttctaggaggaacaacgtttggccagtgcgcatgcctct 155  Q
    |||||||||  ||||||||||||||||||| |||||||||||||||    
T  21487625 gttcgattttcaggaggaacaacgtttggctagtgcgcatgcctct 21487670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 25467419 - 25467468
Alignment:
Q  111 ttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||||  ||||||||||||| ||||||||| ||||||||||||||||    
T  25467419 ttcgattttcaggaggaacaacgattggccagtacgcatgcctctacgca 25467468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 37263263 - 37263343
Alignment:
Q  125 ggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccggtgc 204  Q
    ||||||||| ||||||| |||||||||||||||||| ||  | |||||||| | |||||||| | ||||| ||||||||||    
T  37263263 ggaacaacgcttggccaatgcgcatgcctctacgcacgagccggattagtcgtccacctttattggatcggaaaccggtgc 37263343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 20705587 - 20705622
Alignment:
Q  126 gaacaacgtttggccagtgcgcatgcctctacgcat 161  Q
    ||||||||||||| ||||||||||||||||||||||    
T  20705587 gaacaacgtttggtcagtgcgcatgcctctacgcat 20705622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 160
Target Start/End: Complemental strand, 35403620 - 35403561
Alignment:
Q  101 aaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||||||||   ||| ||||||||| ||||||| |||||||| |||||||||    
T  35403620 aaataccgggttcgattctaagggggaacaacgcttggccaatgcgcatgtctctacgca 35403561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 42291612 - 42291509
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    ||||||||||| |||| | |||  |||||||| ||||||||||| |||||||||||||| ||  | |||||||| | |||||||  | ||||| ||||||    
T  42291612 aataccgggtttgattcccagggtgaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtcgtccacctttgatggatcggaaaccg 42291513  T
Q  201 gtgc 204  Q
    ||||    
T  42291512 gtgc 42291509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 12081908 - 12081966
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||| ||||||||||   ||| ||||||||| ||||||||||||||||| ||||||||    
T  12081908 aatactgggttcgattctcagggggaacaacgcttggccagtgcgcatgcatctacgca 12081966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 163
Target Start/End: Complemental strand, 14974408 - 14974370
Alignment:
Q  125 ggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||| |||||||||||| |||||||||||||||||    
T  14974408 ggaacaacatttggccagtgcacatgcctctacgcatga 14974370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 163
Target Start/End: Original strand, 20590022 - 20590060
Alignment:
Q  125 ggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  20590022 ggaacaacgcttggccagtgcgcatgactctacgcatga 20590060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 30995121 - 30995179
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||| ||||||||| | ||| ||||||||  |||||||| |||||||||||||||||    
T  30995121 aataccaggttcgattcccagggggaacaacacttggccagggcgcatgcctctacgca 30995179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 157
Target Start/End: Complemental strand, 4016368 - 4016307
Alignment:
Q  96 ctgaaaaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctac 157  Q
    |||| ||||| |||||||||||   ||| ||||||||  |||||||||||||||||||||||    
T  4016368 ctgagaaatatcgggttcgattatcagggggaacaacacttggccagtgcgcatgcctctac 4016307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 16757384 - 16757437
Alignment:
Q  108 gggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcat 161  Q
    ||||||||||||  | |||| ||||||||||  |||||||||||||||||||||    
T  16757384 gggttcgatttccggaaggaccaacgtttggttagtgcgcatgcctctacgcat 16757437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 18136387 - 18136326
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| | ||| ||||||||  |||| ||||| |||||||||||| |||||    
T  18136387 aataccgggttcgattcccagggggaacaacacttggtcagtgtgcatgcctctacacatga 18136326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 157
Target Start/End: Original strand, 19839325 - 19839382
Alignment:
Q  100 aaaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctac 157  Q
    |||||||||| ||| ||||  ||||||||||||| |||  ||||||||||||||||||    
T  19839325 aaaataccggattcaattttcaggaggaacaacgcttgatcagtgcgcatgcctctac 19839382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 35638131 - 35638082
Alignment:
Q  111 ttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||||  |||||||||||||||||| ||||| |||| ||||||||||    
T  35638131 ttcgattttcaggaggaacaacgtttggtcagtgtgcatacctctacgca 35638082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 20255388 - 20255452
Alignment:
Q  121 aggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcaccttt 184  Q
    |||| |||||||  ||| ||||||||||||||||||||||||| || |||||||| | |||||||    
T  20255388 aggacgaacaacacttgaccagtgcgcatgcctctacgcatgagtcggattagtcgtccaccttt 20255452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 163
Target Start/End: Original strand, 22295249 - 22295277
Alignment:
Q  135 ttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||||||||||||||||    
T  22295249 ttggccagtgcgcatgcctctacgcatga 22295277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 40060296 - 40060344
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatg 150  Q
    |||||||||||||||||  ||| ||||||||  ||||||||||||||||    
T  40060296 aataccgggttcgattttcagggggaacaacacttggccagtgcgcatg 40060344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 163
Target Start/End: Complemental strand, 42861292 - 42861264
Alignment:
Q  135 ttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||||||||||||||||    
T  42861292 ttggccagtgcgcatgcctctacgcatga 42861264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 5e-23; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 5855522 - 5855621
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||  | |||||||| |||||||||||| | ||| ||||||    
T  5855522 aataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgaggcggattagtcgttcacctttagtgggtcggaaaccg 5855621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 10422788 - 10422891
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||  | |||||||| | ||||||| |||  ||| ||||||    
T  10422788 aataccgggttcgatttctaggaggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtaagtcggaaaccg 10422887  T
Q  201 gtgc 204  Q
    ||||    
T  10422888 gtgc 10422891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 16263545 - 16263604
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcat 161  Q
    |||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  16263545 aataccaggttcgatttccaggaggaacaacgcttggccagtgcgcatgcctctacgcat 16263604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 45361990 - 45361887
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    ||||||||||||||||   ||||||||||||| |||||||||||||||||| |||||||| |  | |||||||| |||||||||||| | ||| ||||||    
T  45361990 aataccgggttcgattctcaggaggaacaacgcttggccagtgcgcatgccactacgcataagccggattagtcgttcacctttagtgggtcggaaaccg 45361891  T
Q  201 gtgc 204  Q
    ||||    
T  45361890 gtgc 45361887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 33498949 - 33498886
Alignment:
Q  100 aaaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||||||||||||   ||||||| ||||| |||||||||||||||||||||||||||||    
T  33498949 aaaataccgggttcgattctcaggaggagcaacgcttggccagtgcgcatgcctctacgcatga 33498886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 49078114 - 49078217
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||||||||||| | ||| | ||||||  |||||||||||||||||||||||||||||  | |||||||| |||||| || |||| ||| ||||||    
T  49078114 aataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgttcaccattggtaggtcggaaaccg 49078213  T
Q  201 gtgc 204  Q
    ||||    
T  49078214 gtgc 49078217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 45536708 - 45536766
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||||||||||| | ||||||||| ||||||||||| ||||||||||||||    
T  45536708 aataccgggttcgatttctaaggggaacaacgcttggccagtgcacatgcctctacgca 45536766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 47313006 - 47312946
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||| ||||||||||||||||    
T  47313006 aataccgggtttgattcctagg-ggaacaacgtttggccagtgcgtatgcctctacgcatga 47312946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 184
Target Start/End: Complemental strand, 11397996 - 11397914
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcaccttt 184  Q
    |||||||||||||||| | ||| ||||||||||||||||| |||| |||||||||||||||| || |||||||| | |||||||    
T  11397996 aataccgggttcgattccgagg-ggaacaacgtttggccaatgcgtatgcctctacgcatgagtcggattagtcgtccaccttt 11397914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 43959929 - 43959826
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||| ||||||| ||| | ||| ||||||||| |||||||||||||||||||||||||| ||  | ||||||||   |||||||||| ||||| ||||||    
T  43959929 aatatcgggttcaattcccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttagtggatcggaaaccg 43959830  T
Q  201 gtgc 204  Q
    ||||    
T  43959829 gtgc 43959826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 125 - 187
Target Start/End: Complemental strand, 2270340 - 2270278
Alignment:
Q  125 ggaacaacgtttggccagtgcgcatgcctctacgcatgaatcgattagtcattcacctttagt 187  Q
    ||||||| |||||| | |||||||| ||||||||||||| ||||||| |||||||||||||||    
T  2270340 ggaacaatgtttggtctgtgcgcatacctctacgcatgagtcgattaatcattcacctttagt 2270278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 9853387 - 9853330
Alignment:
Q  100 aaaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctac 157  Q
    |||||||||||||||||| ||||| | ||||||||||  |||||||||||||||||||    
T  9853387 aaaataccgggttcgattcctaggggaaacaacgttttaccagtgcgcatgcctctac 9853330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 10336516 - 10336577
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||| ||||||||||||  ||| ||||||||| ||| |||||||||||||||||||||||||    
T  10336516 aatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgcatga 10336577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 32142954 - 32142893
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||||  ||| ||||||||  ||||||||||||||||||| |||||||||    
T  32142954 aataccgggttcgattttcagggggaacaacacttggccagtgcgcatgcctttacgcatga 32142893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 41663964 - 41663903
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| | ||| ||||||||  |||| ||||||||||||||||||||||||    
T  41663964 aataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgcatga 41663903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 48798178 - 48798117
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||| ||||||||||||| ||| ||||||||| ||| | |||||||||||||||||||||||    
T  48798178 aatatcgggttcgatttccagggggaacaacgcttgactagtgcgcatgcctctacgcatga 48798117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 19195391 - 19195427
Alignment:
Q  127 aacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||||||||||||||||||||||||    
T  19195391 aacaacgtttggccagtgcgcatgcctctacgcatga 19195427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 105 - 160
Target Start/End: Original strand, 6563444 - 6563499
Alignment:
Q  105 accgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||||||||| ||||| ||||||||| ||||||||||| |||| |||||||||    
T  6563444 accgggttcgattcctagggggaacaacgcttggccagtgcacatgtctctacgca 6563499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 101 - 160
Target Start/End: Complemental strand, 17642113 - 17642054
Alignment:
Q  101 aaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||| |||||||||| | ||| ||||||||  ||||||||||||||||||||||||||    
T  17642113 aaatactgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgca 17642054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 34877990 - 34878045
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctac 157  Q
    |||||| ||||||||| ||||| ||||||||  |||||||||||||||||||||||    
T  34877990 aataccaggttcgattcctaggcggaacaacacttggccagtgcgcatgcctctac 34878045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 40288585 - 40288530
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctac 157  Q
    |||||||||||||||||| ||| ||||||||| |||||||||  ||||||||||||    
T  40288585 aataccgggttcgatttccagggggaacaacggttggccagtatgcatgcctctac 40288530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 93 - 160
Target Start/End: Complemental strand, 50371951 - 50371884
Alignment:
Q  93 tatctgaaaaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||||||||| || |||||||||  |||| |||||||| ||||||||| ||||||| ||||||||    
T  50371951 tatctgaaaaatagcgtgttcgattttcaggaagaacaacgcttggccagtacgcatgcttctacgca 50371884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 10507717 - 10507759
Alignment:
Q  121 aggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  10507717 aggaggaacaacgtttggccagtgtgcatacctctacgcatga 10507759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 12036852 - 12036794
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||| ||||| |||| ||||| ||||||| | ||||||||||||||||||||||||||    
T  12036852 aatactgggtttgattcctagggggaacaatgcttggccagtgcgcatgcctctacgca 12036794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 15465965 - 15466023
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||| ||||||||||| ||| ||||||||| |||| |||||| ||||||||||||||    
T  15465965 aataccaggttcgatttccagggggaacaacgcttggtcagtgcacatgcctctacgca 15466023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 18915867 - 18915925
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||||||| | ||| ||||||||  |||||||||| |||||||||||||||    
T  18915867 aataccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgca 18915925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 163
Target Start/End: Complemental strand, 30927836 - 30927774
Alignment:
Q  101 aaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||| ||||||||||||| ||  ||||||||| ||||||| || ||||||||||||||||||    
T  30927836 aaatatcgggttcgatttccagagggaacaacgcttggccaatgtgcatgcctctacgcatga 30927774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 163
Target Start/End: Complemental strand, 32151023 - 32150969
Alignment:
Q  109 ggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||||| ||| |||||||| ||||| |||||||||||||| |||||||||    
T  32151023 ggttcgatttccagggggaacaacatttggtcagtgcgcatgcctttacgcatga 32150969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 33418223 - 33418169
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctcta 156  Q
    |||||||| ||||||| ||||| || |||||| ||||||||||||||||||||||    
T  33418223 aataccggattcgattcctaggggggacaacgcttggccagtgcgcatgcctcta 33418169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 35908757 - 35908819
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacg-tttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||| |||||||| |||| ||||||||  ||||| ||||||||||||||||||||||||    
T  35908757 aataccggattcgatttttagggggaacaacactttggtcagtgcgcatgcctctacgcatga 35908819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 32871 - 32932
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||| ||||| ||||| | ||||||||||||| |||| |||||| |||||||||||||||||    
T  32871 aatatcgggtccgattcccaggaggaacaacgcttggtcagtgcacatgcctctacgcatga 32932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 9659286 - 9659226
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| | ||| ||||||||||||| | ||||||||||||| |||||||||    
T  9659286 aataccgggttcgattcccagg-ggaacaacgtttgactagtgcgcatgcctttacgcatga 9659226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 13265938 - 13265999
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||| ||||||||| |||||   |||||||| | ||||||||||||||||||||||||||    
T  13265938 aatacctggttcgattcctagggaaaacaacgtctagccagtgcgcatgcctctacgcatga 13265999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 93 - 158
Target Start/End: Complemental strand, 18649469 - 18649404
Alignment:
Q  93 tatctgaaaaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacg 158  Q
    |||||| | |||| ||||||||||||  ||| ||||||||| ||| ||||||||||||||||||||    
T  18649469 tatctggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacg 18649404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 26660138 - 26660199
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||||| | | |||||||| ||||  |||| |||||||||||||||||||    
T  26660138 aataccgggttcgatttccacggggaacaacatttgatcagtacgcatgcctctacgcatga 26660199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 42710248 - 42710147
Alignment:
Q  100 aaaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatcg-attagtcattcacctttagtagatcgaaaac 198  Q
    |||||| ||||||||||||  ||| | |||||   ||||||||||||||||||||||||||| || || ||||||| | |||| || |||||||| ||||    
T  42710248 aaaatatcgggttcgattttcaggggaaacaatacttggccagtgcgcatgcctctacgcataaaccgaattagtcgtccaccattggtagatcggaaac 42710149  T
Q  199 cg 200  Q
    ||    
T  42710148 cg 42710147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 193
Target Start/End: Complemental strand, 45726541 - 45726449
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcg 193  Q
    |||||| |||||||||   |||||||| ||| ||||||||||||| ||| ||||||||||||  | |||||||| ||||||||| || |||||    
T  45726541 aatacctggttcgattctcaggaggaataacatttggccagtgcgtatgtctctacgcatgagccggattagtcgttcacctttggtggatcg 45726449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 50094927 - 50095007
Alignment:
Q  125 ggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccggtgc 204  Q
    ||||||||||||| ||||| ||||||| ||||||||||| || |||||||| | |||| ||||| | ||| ||||||||||    
T  50094927 ggaacaacgtttgaccagtacgcatgcttctacgcatgagtcggattagtcgtccaccattagtgggtcggaaaccggtgc 50095007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 160
Target Start/End: Original strand, 14357746 - 14357813
Alignment:
Q  93 tatctgaaaaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||| |||||| | ||||||||||| |   | ||||||||||| ||||||||||||||||||||||    
T  14357746 tatctggaaaatatcaggttcgatttccaattgaaacaacgtttgaccagtgcgcatgcctctacgca 14357813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 8763991 - 8764049
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||| |||||||| || | ||| ||||||||  ||||||||||||||||||||||||||    
T  8763991 aatatcgggttcgtttcccagggggaacaacacttggccagtgcgcatgcctctacgca 8764049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 13262083 - 13262141
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||||||||||||| |||  ||||||||||||| || | |||||| |||||||||    
T  13262083 aataccgggttcgatttccagggagaacaacgtttggtcaatacgcatgtctctacgca 13262141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 16956491 - 16956549
Alignment:
Q  127 aacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcaccttt 184  Q
    ||||||||||| |||||||||||||||||||||| ||  | ||||||||| ||||||||    
T  16956491 aacaacgtttgaccagtgcgcatgcctctacgcacgagccggattagtcactcaccttt 16956549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 33004123 - 33004065
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||| ||| ||||||||| ||| | ||||| | ||||||||||||||||||||||||||    
T  33004123 aatatcggattcgatttccaggggaaacaatgcttggccagtgcgcatgcctctacgca 33004065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 34334403 - 34334353
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcc 152  Q
    |||||||||||||||| | ||| ||||||||  ||||||||||||||||||    
T  34334403 aataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcc 34334353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 38791703 - 38791657
Alignment:
Q  117 ttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||| | ||||||| ||||| |||||||||||||||||||||||    
T  38791703 ttctaggggaaacaacgattggcaagtgcgcatgcctctacgcatga 38791657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 50503469 - 50503411
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||| ||||||||||| | ||| ||||||||  ||| ||||||||||||||||||||||    
T  50503469 aatatcgggttcgattcccagggggaacaacacttgaccagtgcgcatgcctctacgca 50503411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 8905314 - 8905281
Alignment:
Q  60 aaccaagttgtttggactctagtgacaaggagct 93  Q
    |||||||||||||||||||||||| |||||||||    
T  8905314 aaccaagttgtttggactctagtggcaaggagct 8905281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 10173055 - 10173018
Alignment:
Q  126 gaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  10173055 gaacaacgcttggccagtgcccatgcctctacgcatga 10173018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 160
Target Start/End: Complemental strand, 21849307 - 21849255
Alignment:
Q  107 cgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||||||| | ||| ||||||||| ||||| ||||||||||||||||||||    
T  21849307 cgggttcgattcccagg-ggaacaacgcttggctagtgcgcatgcctctacgca 21849255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 26325812 - 26325873
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||| ||||||||||| | ||  ||||||||  |||| ||||||||||||||||||||||||    
T  26325812 aatatcgggttcgattcccagcgggaacaacacttggtcagtgcgcatgcctctacgcatga 26325873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 31734303 - 31734344
Alignment:
Q  117 ttctaggaggaacaacgtttggccagtgcgcatgcctctacg 158  Q
    ||||||| | ||||||| ||||||||||||||||||||||||    
T  31734303 ttctaggggaaacaacgattggccagtgcgcatgcctctacg 31734344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 34697335 - 34697396
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||| |||||||||  |||| ||||||||  ||||| |||| ||||||||||||||||||    
T  34697335 aataccaggttcgattcttagggggaacaacacttggctagtgtgcatgcctctacgcatga 34697396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 160
Target Start/End: Original strand, 42744799 - 42744836
Alignment:
Q  123 gaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  42744799 gaggaacaacgcttggccagtgagcatgcctctacgca 42744836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 15238214 - 15238150
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc 166  Q
    |||| ||||||||||| | ||| ||| ||||| ||||||| || ||||||||||||||| |||||    
T  15238214 aatatcgggttcgattcccagggggagcaacgcttggccaatgagcatgcctctacgcacgaatc 15238150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 204
Target Start/End: Complemental strand, 17092586 - 17092482
Alignment:
Q  101 aaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaacc 199  Q
    ||||| || |||||||||  ||| | ||||||| |||||||||| | ||||||||||||| ||  | |||||||| | ||||||| |||||||  |||||    
T  17092586 aaatatcgagttcgattttcaggggaaacaacgattggccagtgtgtatgcctctacgcacgagccggattagtcgtccacctttggtagatcagaaacc 17092487  T
Q  200 ggtgc 204  Q
    |||||    
T  17092486 ggtgc 17092482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 31576714 - 31576678
Alignment:
Q  57 ctgaaccaagttgtttggactctagtgacaaggagct 93  Q
    |||||||||||||||||| |||||||| |||||||||    
T  31576714 ctgaaccaagttgtttgggctctagtggcaaggagct 31576678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 35211275 - 35211219
Alignment:
Q  107 cgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||||||| || |||||||| | || |||| | |||||||||||||||||||    
T  35211275 cgggttcgatttccagaaggaacaatgcttagccaatacgcatgcctctacgcatga 35211219  T

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Target: scaffold0291 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 6857 - 6960
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccg 200  Q
    |||||||||||||||| | ||| ||||||||  |||||||||||||||||||||||||||||  | ||||||||  |||||||| || | ||| ||||||    
T  6857 aataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccg 6956  T
Q  201 gtgc 204  Q
    ||||    
T  6957 gtgc 6960  T

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Target: scaffold0170 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 93 - 160
Target Start/End: Original strand, 9838 - 9905
Alignment:
Q  93 tatctgaaaaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||||||  |||||||| ||||||||| ||| ||||||||| ||||||||||||||||||||||||||    
T  9838 tatctgaggaataccggattcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgca 9905  T

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Target: scaffold0316 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 1721 - 1660
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||| ||||||||||| ||| ||||||||| || ||||||||||||||||||||||||||    
T  1721 aataccaggttcgatttccagggggaacaacgattagccagtgcgcatgcctctacgcatga 1660  T

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Target: scaffold0016 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 8808 - 8747
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||||||||||||| | ||| ||||||||| ||||||||||||| |||||||||||||||    
T  8808 aataccgggttcgattcccagggggaacaacgcttggccagtgcgcttgcctctacgcatga 8747  T

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Target: scaffold0002 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 319424 - 319485
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||||| |||||||||| ||||||||| ||||||||||||||| |||||| ||||||    
T  319424 aataccgggtttgatttctagggggaacaacgcttggccagtgcgcatccctctatgcatga 319485  T

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Target: scaffold0209 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 163
Target Start/End: Original strand, 12576 - 12636
Alignment:
Q  101 aaataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||||||||||||||| |||||  |||||||| ||| |||||||||||||||||||||||||    
T  12576 aaataccgggttcgattcctagg--gaacaacgcttgaccagtgcgcatgcctctacgcatga 12636  T

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Target: scaffold0376 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 12672 - 12730
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||||||||||||   ||||||||||||| |||||||||| |||||||||||||||    
T  12672 aataccgggttcgattcagaggaggaacaacgcttggccagtgtgcatgcctctacgca 12730  T

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Target: scaffold0086 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 26185 - 26243
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||| |||||||||||| ||| ||||||||| |||||||||| |||||||||||||||    
T  26185 aatactgggttcgatttccagggggaacaacgcttggccagtgtgcatgcctctacgca 26243  T

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Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 95086 - 95027
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||||| ||||||||||||||||  ||||||||||| ||||||||||||||| |||||||||    
T  95086 aataccaggttcgatttctagga--aacaacgtttgaccagtgcgcatgcctttacgcatga 95027  T

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Target: scaffold0005 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 219402 - 219474
Alignment:
Q  133 gtttggccagtgcgcatgcctctacgcatgaa-tcgattagtcattcacctttagtagatcgaaaaccggtgc 204  Q
    |||||||||||||||||||||||||||| ||| | |||||||| | |||||||  | ||||||||||||||||    
T  219402 gtttggccagtgcgcatgcctctacgcacgaactggattagtcgtccacctttgatggatcgaaaaccggtgc 219474  T

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Target: scaffold0005; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 271181 - 271123
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    |||| ||||||||||| | ||| ||||||||| |||| ||||||||||| |||||||||    
T  271181 aatatcgggttcgattcccagggggaacaacgcttggtcagtgcgcatgtctctacgca 271123  T

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Target: scaffold0341 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 105 - 160
Target Start/End: Original strand, 18637 - 18692
Alignment:
Q  105 accgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||||||||| ||||| ||||||||| ||||||||||| |||| |||||||||    
T  18637 accgggttcgattcctagggggaacaacgcttggccagtgcacatgtctctacgca 18692  T

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Target: scaffold0384 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 5975 - 6035
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    ||||| |||||||||||| ||| ||| ||||| ||||||||||| |||||||||||||||||    
T  5975 aatactgggttcgatttccaggggga-caacgcttggccagtgcacatgcctctacgcatga 6035  T

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Target: scaffold0010 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 109 - 185
Target Start/End: Complemental strand, 25884 - 25807
Alignment:
Q  109 ggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcaccttta 185  Q
    ||||||||| |||||  |||||||| |||||||||||||||| |||||||| |||| | |||||||||  ||||||||    
T  25884 ggttcgattcctagggagaacaacgcttggccagtgcgcatgactctacgcgtgaaccagattagtcacccaccttta 25807  T

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Target: scaffold0010; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 155809 - 155760
Alignment:
Q  111 ttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgca 160  Q
    ||||||| | ||| ||||||||| ||||| ||||||||||||||||||||    
T  155809 ttcgattcccagggggaacaacgcttggctagtgcgcatgcctctacgca 155760  T

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Target: scaffold0050 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 72634 - 72686
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctc 154  Q
    |||||||||||||||||| | | ||||||||| ||| ||||||||||||||||    
T  72634 aataccgggttcgatttccaaggggaacaacgcttgaccagtgcgcatgcctc 72686  T

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Target: scaffold0041 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 25110 - 25190
Alignment:
Q  125 ggaacaacgtttggccagtgcgcatgcctctacgcatgaatc-gattagtcattcacctttagtagatcgaaaaccggtgc 204  Q
    |||||||| ||||| |||||||||||  |||||||||||||| ||||| || | ||||||| || ||||| ||||||||||    
T  25110 ggaacaacatttggacagtgcgcatgtttctacgcatgaatcagattaatcgtccacctttggtggatcggaaaccggtgc 25190  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 65236 - 65156
Alignment:
Q  125 ggaacaacgtttggccagtgcgcatgcctctacgcatga-atcgattagtcattcacctttagtagatcgaaaaccggtgc 204  Q
    ||||||||| |||||||||||||||| ||||||||||||  | ||||||||  |||| |||  ||||||| ||||||||||    
T  65236 ggaacaacgcttggccagtgcgcatgtctctacgcatgagctggattagtcgctcacttttgatagatcggaaaccggtgc 65156  T

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Target: scaffold0079 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 8177 - 8231
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctac 157  Q
    |||||||||||||||| | | | ||||||||| |||||||||||||||||||||||    
T  8177 aataccgggttcgattcccaag-ggaacaacgcttggccagtgcgcatgcctctac 8231  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 42939 - 42878
Alignment:
Q  102 aataccgggttcgatttctaggaggaacaacgtttggccagtgcgcatgcctctacgcatga 163  Q
    |||| ||||||||||| |||||  |||||| | |||| |||||||||||||||||| |||||    
T  42939 aatatcgggttcgattcctagggagaacaatgcttggtcagtgcgcatgcctctacacatga 42878  T

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