View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4788_high_8 (Length: 227)
Name: NF4788_high_8
Description: NF4788
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4788_high_8 |
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Alignment Details
Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 7 - 223
Target Start/End: Complemental strand, 8822584 - 8822368
Alignment:
| Q |
7 |
agattgaattctcagcgaggttcagaacagtcagtcgttgtaactttccaatgttcaccggaatttttccggtgagctggtttccgataagatccaaaat |
106 |
Q |
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| T |
8822584 |
agattgaattctcagcgaggttcagaacagtcagtcgttgtaactttccaatgttcaccggaatttttccggtgagctggtttccgataagatccaaaat |
8822485 |
T |
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| Q |
107 |
gcggagattggagagagaagtgagacattgtggaatctcaccggagatagctttccaatcggcgagtatgaaggaagtgaggctgtcaattttgcaaatc |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8822484 |
gcggagattggagagagaagtgagacattgtggaatctcaccggagatagctttccaatcggcgagtatgaaggaagtgaggctgtcaattttgcaaatc |
8822385 |
T |
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| Q |
207 |
tccggtgagatttttcc |
223 |
Q |
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||||||||||||||||| |
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| T |
8822384 |
tccggtgagatttttcc |
8822368 |
T |
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