View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4789-Insertion-14 (Length: 264)
Name: NF4789-Insertion-14
Description: NF4789
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4789-Insertion-14 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 10 - 264
Target Start/End: Complemental strand, 42086605 - 42086351
Alignment:
| Q |
10 |
ttgaaggttttgtatcaagccattctttacaaactttagggtttattccacctactttacctcgtgaaccggttgacagaacaacgggtccaatcgacca |
109 |
Q |
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| T |
42086605 |
ttgaaggttttgtatcaagccattctttacaaactttagggtttattccacctactttacctcgtgaaccggttgacagaacaacgggtccaatcgacca |
42086506 |
T |
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| Q |
110 |
aaccggaatattgaatttcctggtgaagtagttgagcccaacagagtcaaaatctgagactgagttgaaaataataccatctgagttgacccaatcacag |
209 |
Q |
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| T |
42086505 |
aaccggaatattgaatttcctggtgaagtagttgagcccaacagagtcaaaatctgaaactgagttgaaaataataccatctgagttgacccaatcacag |
42086406 |
T |
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| Q |
210 |
agattattcttcctttgaaaaatcgaccaatcatcaaatccatcagcttgtgaga |
264 |
Q |
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| T |
42086405 |
agattattcttcctttgaaaaatcgaccaatcatcaaatccatcagcttgtgaga |
42086351 |
T |
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