View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4789-Insertion-5 (Length: 652)

Name: NF4789-Insertion-5
Description: NF4789
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4789-Insertion-5
NF4789-Insertion-5
[»] chr6 (26 HSPs)
chr6 (324-597)||(4922100-4922372)
chr6 (9-300)||(4922398-4922689)
chr6 (12-64)||(10335664-10335716)
chr6 (222-299)||(13583542-13583619)
chr6 (222-283)||(15291697-15291758)
chr6 (222-272)||(12412270-12412320)
chr6 (248-299)||(5604608-5604659)
chr6 (228-271)||(6555534-6555577)
chr6 (220-299)||(9977048-9977127)
chr6 (222-269)||(28898849-28898896)
chr6 (229-287)||(2617208-2617266)
chr6 (222-272)||(3358384-3358434)
chr6 (234-272)||(6160686-6160724)
chr6 (223-272)||(331904-331953)
chr6 (227-272)||(404161-404206)
chr6 (223-272)||(2726435-2726484)
chr6 (223-272)||(2945768-2945817)
chr6 (224-297)||(20744133-20744206)
chr6 (230-299)||(21598958-21599027)
chr6 (223-300)||(23629827-23629904)
chr6 (224-269)||(24438303-24438348)
chr6 (222-283)||(34701140-34701201)
chr6 (227-271)||(429475-429519)
chr6 (224-272)||(17382079-17382127)
chr6 (217-253)||(24397569-24397605)
chr6 (223-299)||(27834333-27834409)
[»] chr1 (40 HSPs)
chr1 (12-64)||(33070716-33070768)
chr1 (222-300)||(3431323-3431401)
chr1 (222-298)||(12212288-12212364)
chr1 (222-269)||(6094415-6094462)
chr1 (218-272)||(13054862-13054916)
chr1 (229-299)||(28832162-28832232)
chr1 (227-292)||(14880826-14880891)
chr1 (235-292)||(19396189-19396246)
chr1 (223-272)||(31979453-31979502)
chr1 (222-299)||(32944729-32944806)
chr1 (221-268)||(16137218-16137265)
chr1 (222-269)||(30678834-30678881)
chr1 (222-265)||(37037340-37037383)
chr1 (232-271)||(41972749-41972788)
chr1 (222-297)||(52267757-52267832)
chr1 (222-272)||(41763173-41763223)
chr1 (222-272)||(41973248-41973298)
chr1 (222-272)||(47719125-47719175)
chr1 (227-272)||(2889944-2889989)
chr1 (226-299)||(3777715-3777788)
chr1 (222-283)||(7803398-7803459)
chr1 (222-283)||(8266193-8266254)
chr1 (222-299)||(16580790-16580867)
chr1 (223-272)||(21400041-21400090)
chr1 (223-272)||(26803469-26803518)
chr1 (222-299)||(36467016-36467093)
chr1 (223-272)||(37098499-37098548)
chr1 (222-283)||(37705118-37705179)
chr1 (242-299)||(41974774-41974831)
chr1 (222-299)||(52043266-52043343)
chr1 (228-296)||(4806789-4806857)
chr1 (223-299)||(8269359-8269435)
chr1 (223-299)||(17139508-17139584)
chr1 (227-299)||(24978242-24978314)
chr1 (223-299)||(27533237-27533313)
chr1 (227-299)||(29042535-29042607)
chr1 (229-297)||(32560973-32561041)
chr1 (223-299)||(33153871-33153947)
chr1 (223-299)||(34632163-34632239)
chr1 (36-64)||(50239058-50239086)
[»] chr7 (31 HSPs)
chr7 (222-300)||(21136824-21136901)
chr7 (222-299)||(3584197-3584274)
chr7 (221-272)||(21554952-21555003)
chr7 (221-299)||(10025986-10026064)
chr7 (242-287)||(34773244-34773289)
chr7 (234-295)||(44941408-44941469)
chr7 (223-299)||(6579612-6579688)
chr7 (12-64)||(19880019-19880070)
chr7 (222-272)||(5041332-5041382)
chr7 (222-272)||(5833035-5833085)
chr7 (226-272)||(15135081-15135127)
chr7 (222-272)||(26816682-26816732)
chr7 (222-272)||(27263334-27263384)
chr7 (222-272)||(27270228-27270278)
chr7 (222-272)||(32062016-32062066)
chr7 (223-272)||(3830062-3830111)
chr7 (222-299)||(5579686-5579763)
chr7 (226-287)||(21164761-21164822)
chr7 (227-272)||(21751644-21751689)
chr7 (215-272)||(27544943-27545000)
chr7 (222-299)||(35142140-35142217)
chr7 (223-280)||(35763699-35763756)
chr7 (222-299)||(37495909-37495986)
chr7 (235-272)||(39458562-39458599)
chr7 (223-272)||(44454506-44454555)
chr7 (223-299)||(30006083-30006159)
chr7 (36-64)||(35600821-35600849)
chr7 (223-299)||(40187627-40187703)
chr7 (228-300)||(41029271-41029343)
chr7 (224-272)||(41527555-41527603)
chr7 (227-271)||(45421319-45421363)
[»] chr2 (33 HSPs)
chr2 (13-64)||(32975170-32975221)
chr2 (227-300)||(11790324-11790397)
chr2 (223-299)||(24592837-24592913)
chr2 (13-52)||(3104599-3104638)
chr2 (222-297)||(28874545-28874620)
chr2 (222-269)||(31837957-31838004)
chr2 (224-299)||(36615024-36615099)
chr2 (224-299)||(41939099-41939174)
chr2 (222-299)||(10723932-10724009)
chr2 (222-299)||(21482510-21482587)
chr2 (223-272)||(27152347-27152396)
chr2 (226-299)||(31815878-31815951)
chr2 (226-299)||(44198265-44198338)
chr2 (224-283)||(36547242-36547301)
chr2 (222-272)||(2783000-2783050)
chr2 (222-292)||(4122011-4122081)
chr2 (222-292)||(7206118-7206188)
chr2 (245-287)||(20897843-20897885)
chr2 (222-272)||(45032686-45032736)
chr2 (223-272)||(2256965-2257014)
chr2 (222-271)||(4858726-4858775)
chr2 (223-272)||(13196694-13196743)
chr2 (226-299)||(17142827-17142900)
chr2 (222-299)||(22523003-22523080)
chr2 (234-299)||(25395433-25395498)
chr2 (222-275)||(28277691-28277744)
chr2 (223-268)||(30089043-30089088)
chr2 (223-268)||(30125647-30125692)
chr2 (223-264)||(33600749-33600790)
chr2 (223-272)||(34977198-34977247)
chr2 (242-299)||(35372930-35372987)
chr2 (255-299)||(12303605-12303649)
chr2 (227-283)||(22608525-22608581)
[»] chr4 (46 HSPs)
chr4 (245-299)||(33758795-33758849)
chr4 (237-299)||(48067141-48067203)
chr4 (222-272)||(54151643-54151693)
chr4 (224-297)||(6610258-6610331)
chr4 (223-299)||(43034333-43034409)
chr4 (222-272)||(8494980-8495030)
chr4 (222-272)||(20096288-20096338)
chr4 (222-300)||(22630350-22630428)
chr4 (224-289)||(10069089-10069154)
chr4 (223-272)||(13121538-13121587)
chr4 (222-299)||(21318244-21318321)
chr4 (222-287)||(21623422-21623487)
chr4 (222-299)||(36489379-36489456)
chr4 (223-272)||(36720672-36720721)
chr4 (223-299)||(10082396-10082472)
chr4 (228-272)||(38374956-38375000)
chr4 (222-269)||(49491181-49491228)
chr4 (222-272)||(9972122-9972172)
chr4 (222-272)||(13276122-13276172)
chr4 (222-272)||(15170117-15170167)
chr4 (222-292)||(21052555-21052625)
chr4 (221-299)||(22164260-22164338)
chr4 (226-296)||(31352109-31352179)
chr4 (230-272)||(35806363-35806404)
chr4 (229-283)||(38416057-38416111)
chr4 (222-272)||(42344636-42344686)
chr4 (222-272)||(50362157-50362207)
chr4 (223-268)||(7490359-7490404)
chr4 (223-272)||(7967643-7967692)
chr4 (234-287)||(11940811-11940864)
chr4 (223-272)||(16733537-16733586)
chr4 (223-272)||(20799412-20799461)
chr4 (223-272)||(23225859-23225908)
chr4 (228-269)||(26610182-26610223)
chr4 (226-299)||(30380527-30380600)
chr4 (222-287)||(31041368-31041433)
chr4 (222-299)||(36490561-36490638)
chr4 (234-299)||(37930838-37930903)
chr4 (234-299)||(48171886-48171951)
chr4 (255-300)||(48251898-48251943)
chr4 (222-299)||(55061030-55061107)
chr4 (226-271)||(56479251-56479296)
chr4 (224-272)||(16054555-16054603)
chr4 (220-272)||(24665009-24665061)
chr4 (235-271)||(41897572-41897608)
chr4 (234-290)||(49579960-49580016)
[»] chr5 (33 HSPs)
chr5 (227-300)||(19647498-19647571)
chr5 (222-275)||(31198702-31198755)
chr5 (227-290)||(5974225-5974288)
chr5 (222-272)||(33645707-33645757)
chr5 (218-272)||(34436840-34436894)
chr5 (226-272)||(41417760-41417806)
chr5 (235-272)||(2642781-2642818)
chr5 (222-299)||(6489000-6489077)
chr5 (223-299)||(15889405-15889481)
chr5 (221-277)||(20211272-20211328)
chr5 (222-269)||(689540-689587)
chr5 (225-300)||(5107235-5107310)
chr5 (228-299)||(11647196-11647267)
chr5 (228-271)||(33952799-33952842)
chr5 (222-297)||(40837896-40837971)
chr5 (222-272)||(1808611-1808661)
chr5 (223-289)||(7112588-7112654)
chr5 (242-292)||(11017189-11017239)
chr5 (229-299)||(20114705-20114775)
chr5 (222-268)||(20370152-20370198)
chr5 (222-272)||(33654741-33654791)
chr5 (224-270)||(36564448-36564494)
chr5 (222-272)||(38495135-38495185)
chr5 (223-272)||(5485180-5485229)
chr5 (223-272)||(11720888-11720937)
chr5 (227-268)||(14124299-14124340)
chr5 (223-272)||(24485693-24485742)
chr5 (222-283)||(30893926-30893987)
chr5 (222-299)||(40445976-40446053)
chr5 (228-272)||(3671217-3671261)
chr5 (240-272)||(5998956-5998988)
chr5 (228-272)||(6898020-6898064)
chr5 (224-272)||(16701599-16701647)
[»] chr3 (34 HSPs)
chr3 (226-269)||(17035934-17035977)
chr3 (223-297)||(48315017-48315091)
chr3 (218-268)||(48924341-48924391)
chr3 (222-272)||(51250251-51250301)
chr3 (222-275)||(1757684-1757737)
chr3 (223-272)||(2105716-2105765)
chr3 (222-283)||(27432227-27432288)
chr3 (223-272)||(33771684-33771733)
chr3 (242-291)||(36431822-36431871)
chr3 (223-299)||(7464482-7464558)
chr3 (228-292)||(14771330-14771394)
chr3 (224-271)||(11436502-11436549)
chr3 (222-269)||(53633638-53633685)
chr3 (226-272)||(2078237-2078283)
chr3 (222-272)||(7738662-7738712)
chr3 (226-272)||(21967553-21967599)
chr3 (226-272)||(21989989-21990035)
chr3 (223-272)||(18870743-18870792)
chr3 (224-269)||(25279086-25279131)
chr3 (222-299)||(34899090-34899167)
chr3 (235-272)||(35126287-35126324)
chr3 (226-275)||(41474516-41474565)
chr3 (227-272)||(52337364-52337409)
chr3 (220-272)||(1149087-1149139)
chr3 (228-272)||(10922326-10922370)
chr3 (255-299)||(12131664-12131708)
chr3 (220-272)||(17588353-17588405)
chr3 (220-272)||(19883078-19883130)
chr3 (36-64)||(23770639-23770667)
chr3 (224-284)||(30912822-30912882)
chr3 (224-292)||(37920996-37921064)
chr3 (36-64)||(41670475-41670503)
chr3 (223-299)||(52543683-52543759)
chr3 (20-64)||(55322622-55322666)
[»] scaffold0182 (1 HSPs)
scaffold0182 (230-272)||(17789-17831)
[»] scaffold0045 (3 HSPs)
scaffold0045 (222-272)||(42211-42261)
scaffold0045 (223-283)||(63856-63916)
scaffold0045 (223-283)||(71188-71248)
[»] chr8 (29 HSPs)
chr8 (222-296)||(37938488-37938562)
chr8 (223-277)||(37999433-37999487)
chr8 (12-62)||(45407190-45407240)
chr8 (223-300)||(11708980-11709057)
chr8 (222-299)||(29186495-29186572)
chr8 (223-283)||(13357448-13357508)
chr8 (12-64)||(34873950-34874002)
chr8 (217-272)||(29924935-29924990)
chr8 (221-272)||(39821876-39821927)
chr8 (222-272)||(7553672-7553722)
chr8 (222-268)||(8687859-8687905)
chr8 (234-272)||(8984512-8984550)
chr8 (222-272)||(23816783-23816833)
chr8 (222-272)||(31086066-31086116)
chr8 (222-272)||(32192887-32192937)
chr8 (222-272)||(33451367-33451417)
chr8 (221-271)||(42200681-42200731)
chr8 (223-300)||(21557427-21557504)
chr8 (224-269)||(23692418-23692463)
chr8 (222-299)||(29376894-29376971)
chr8 (227-272)||(31664028-31664072)
chr8 (223-272)||(34968549-34968598)
chr8 (226-283)||(42700502-42700559)
chr8 (228-272)||(15079170-15079214)
chr8 (223-271)||(18942912-18942960)
chr8 (223-271)||(26252360-26252408)
chr8 (227-299)||(30071507-30071579)
chr8 (223-271)||(39756963-39757011)
chr8 (255-299)||(41472504-41472548)
[»] scaffold0050 (1 HSPs)
scaffold0050 (224-299)||(53371-53446)
[»] scaffold0083 (1 HSPs)
scaffold0083 (222-272)||(45936-45986)
[»] scaffold0040 (1 HSPs)
scaffold0040 (222-272)||(56777-56827)
[»] scaffold0008 (1 HSPs)
scaffold0008 (222-272)||(119562-119612)
[»] scaffold0262 (1 HSPs)
scaffold0262 (223-272)||(15948-15997)
[»] scaffold0122 (1 HSPs)
scaffold0122 (226-299)||(14177-14250)


Alignment Details
Target: chr6 (Bit Score: 222; Significance: 1e-122; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 324 - 597
Target Start/End: Complemental strand, 4922372 - 4922100
Alignment:
Q  324 ttcatgttttgcaaatttgagagttcattctaattctaacaaggcgagtaccaattctattggtttggttatgtggtgagaagttttggtgctaatttga 423  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||| |||||||| |||| |||||||     
T  4922372 ttcatgttttgcaaatttgagagttcattctaattctaacaaggtgagtaccaattatattggtttagttatgtggt-agaagtttcggtgttaatttgg 4922274  T
Q  424 gagttcaaatgaagttggaagttgtgaactcaagtagctaataagacgaattgtttagattaatcaattttttgtcaaacaaatacaataaaaattaatc 523  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  4922273 gagttcaaatgaagttggaagttgtgaactcaagtagctaataagacgaattgtttagattaatcaattttttgtcaaacaaatacaataaaaattaatt 4922174  T
Q  524 atgtataaaacatatttatttagtggtgtaattgcagaaacgaatacgttaacatataatgggcgttttcagat 597  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||    
T  4922173 atgtataaaagatatttatttagtggtgtaattgcagaaacgaatatgttaacatgtaatgggcattttcagat 4922100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 9 - 300
Target Start/End: Complemental strand, 4922689 - 4922398
Alignment:
Q  9 tacctactttcctttgtaaattagtgtttgtcactcaaatggttgttcaaataacatctaataataataatagaatataaattatgtggcattttaaact 108  Q
    |||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||    
T  4922689 tacctactttcctttgtaaattagttgttgtcactcaaatgattgttcaaataacatctcataataataatagaatataa-ttaagtggcattttaaact 4922591  T
Q  109 tctttaattttcacacaactcttagctagacattagagtatgaaataatc-nnnnnnnnnnnnnnaaatttcctttgatatatttttaagtggaactaaa 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||| || |||||||||||| |||||||    
T  4922590 tctttaattttcacacaactcttagctagacattagagtatgaaataatcatatttttttttttaaaatttcctttcatgtatttttaagtgtaactaaa 4922491  T
Q  208 gtgttcatgttctctgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccaccat 300  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4922490 gtgttcatgttctttgtcctcatgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccaccat 4922398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 10335664 - 10335716
Alignment:
Q  12 ctactttcctttgtaaattagtgtttgtcactcaaatggttgttcaaataaca 64  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10335664 ctactttcctttgtaaattagtggttgtcactcaaatggttgttcaaataaca 10335716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 13583542 - 13583619
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||||||||| |||||||  ||||||| ||||||||||||||||||||||  |  |||||| ||| |||||||||||    
T  13583542 tgtcctcgtgagcttaactcggttggtaaggataatgtataatatatgcaagctcagaggttcaaaccccgaccacca 13583619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 15291758 - 15291697
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtt 283  Q
    ||||||||||| |||||||||||||||| ||| |||| ||||||||||||| || |||||||    
T  15291758 tgtcctcgtgagcttaacttagttggtaaggacaatgaataatatatgcaaggtttgaggtt 15291697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 12412270 - 12412320
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||||| ||||||||||||||||| || |||| |||||||||||||    
T  12412270 tgtcctcgtgagcttaacttagttggtagagacaatgcataatatatgcaa 12412320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 299
Target Start/End: Complemental strand, 5604659 - 5604608
Alignment:
Q  248 tagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||| |||||||||||||||||  || ||||||| |||||||||||||||    
T  5604659 tagggacaatgtataatatatgcatagtctgaggttcaaatcccgaccacca 5604608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 6555577 - 6555534
Alignment:
Q  228 cgtgaacttaacttagttggtagggataatgtataatatatgca 271  Q
    |||||||||| || |||||||||||| |||||||||||||||||    
T  6555577 cgtgaacttagctcagttggtagggacaatgtataatatatgca 6555534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 299
Target Start/End: Original strand, 9977048 - 9977127
Alignment:
Q  220 tctgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||||||| ||| ||||||| | |||||| |||||||| ||||||||||||| || || |||| ||| || ||||||||    
T  9977048 tctgtcctcctgagcttaactcaattggtatggataatgcataatatatgcaaggtctggggttcaaaccctgaccacca 9977127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 28898849 - 28898896
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatg 269  Q
    ||||||||||| |||||||||||||||| ||| |||| ||||||||||    
T  28898849 tgtcctcgtgatcttaacttagttggtaaggacaatgcataatatatg 28898896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 229 - 287
Target Start/End: Complemental strand, 2617266 - 2617208
Alignment:
Q  229 gtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaa 287  Q
    |||| ||||||||||||||||| || |||| |||||||||| || || |||||||||||    
T  2617266 gtgagcttaacttagttggtagagacaatgcataatatatgtaaggtttgaggtttaaa 2617208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 3358384 - 3358434
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||||||||||||| |||||||  ||| |||| |||||||||||||    
T  3358384 tgtcctcgtgaacttaactcagttggtttggacaatgcataatatatgcaa 3358434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 234 - 272
Target Start/End: Complemental strand, 6160724 - 6160686
Alignment:
Q  234 cttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||||||||| ||| ||||||||||||||||||    
T  6160724 cttaacttagttggtatggacaatgtataatatatgcaa 6160686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 331953 - 331904
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||| ||||||| ||||||||| || |||| |||||||||||||    
T  331953 gtcctcgtgagcttaactcagttggtagagacaatgcataatatatgcaa 331904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 404161 - 404206
Alignment:
Q  227 tcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||| |||||||||||||||| ||| |||| |||||||||||||    
T  404161 tcgtgagcttaacttagttggtaaggacaatgcataatatatgcaa 404206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 2726484 - 2726435
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||| ||||||||| |||||||| ||| |||| |||||||||||||    
T  2726484 gtcctcgtaaacttaactcagttggtatggacaatgcataatatatgcaa 2726435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 2945768 - 2945817
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||||||||| |||| |||||| |||||||  |||||||||||||    
T  2945768 gtcctcgtgaacttatcttaattggtatggataatacataatatatgcaa 2945817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 20744133 - 20744206
Alignment:
Q  224 tcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccac 297  Q
    ||||||||| |||| || |||||||| ||| |||| ||||||||||||| || || |||| ||| |||||||||    
T  20744133 tcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtctggggttcaaaccccgaccac 20744206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 299
Target Start/End: Original strand, 21598958 - 21599027
Alignment:
Q  230 tgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||||||||||||||||| | | |||  ||||||||||||| ||| | |||||||| |||| ||||||    
T  21598958 tgaacttaacttagttggtatgaacaatacataatatatgcaaggtacggggtttaaaccccggccacca 21599027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 300
Target Start/End: Complemental strand, 23629904 - 23629827
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccaccat 300  Q
    ||||||||||||||| || | ||||||  || |||| ||||||||||||| |||||| ||| ||| ||||| ||||||    
T  23629904 gtcctcgtgaacttagctcaattggtaatgacaatgcataatatatgcaaggtatgaagttcaaaccccgaacaccat 23629827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 269
Target Start/End: Complemental strand, 24438348 - 24438303
Alignment:
Q  224 tcctcgtgaacttaacttagttggtagggataatgtataatatatg 269  Q
    ||||||||||||||||| |||||||| | |||||| ||||||||||    
T  24438348 tcctcgtgaacttaactcagttggtaagaataatgcataatatatg 24438303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 34701140 - 34701201
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtt 283  Q
    ||||||||||||||||  | |||||||||| | |||| ||||||||||||| || |||||||    
T  34701140 tgtcctcgtgaacttagttcagttggtaggaacaatgcataatatatgcaaggtctgaggtt 34701201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 429519 - 429475
Alignment:
Q  227 tcgtgaacttaacttagttggtagggataatgtataatatatgca 271  Q
    |||| |||||||||||| ||||||||| |||| ||||||||||||    
T  429519 tcgtaaacttaacttagctggtagggagaatgcataatatatgca 429475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 224 - 272
Target Start/End: Original strand, 17382079 - 17382127
Alignment:
Q  224 tcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||| |||| || |||||||| ||| ||||||||||||||||||    
T  17382079 tcctcgtgagcttagctcagttggtatggacaatgtataatatatgcaa 17382127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 24397569 - 24397605
Alignment:
Q  217 ttctctgtcctcgtgaacttaacttagttggtaggga 253  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  24397569 ttctctatcctcgtgatcttaacttagttggtaggga 24397605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 299
Target Start/End: Original strand, 27834333 - 27834409
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||||||| ||||||| ||| |||||||| || | ||||||||||||| || || |||| ||| || ||||||||    
T  27834333 gtcctcgtgagcttaactcagtgggtagggacaaggcataatatatgcaaggtctggggttcaaacccggaccacca 27834409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 3e-16; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 33070716 - 33070768
Alignment:
Q  12 ctactttcctttgtaaattagtgtttgtcactcaaatggttgttcaaataaca 64  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  33070716 ctactttcctttgtaaattagtggttgtcactcaaatgattgttcaaataaca 33070768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 3431323 - 3431401
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccaccat 300  Q
    |||||||||||  |||||| |||||||||| | |||| ||||||||||||| ||| |||||| ||| ||||||||||||    
T  3431323 tgtcctcgtgagtttaactcagttggtaggaagaatgcataatatatgcaatgtacgaggttcaaaccccgaccaccat 3431401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 222 - 298
Target Start/End: Original strand, 12212288 - 12212364
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacc 298  Q
    |||| |||||| ||||||| | ||||||||||||||| ||||||||||||||||  | |||| ||| ||||||||||    
T  12212288 tgtcgtcgtgagcttaactcatttggtagggataatgcataatatatgcaacgtccggggttcaaaccccgaccacc 12212364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 6094415 - 6094462
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatg 269  Q
    ||||||||||| ||||||| |||||||| |||||||||||||||||||    
T  6094415 tgtcctcgtgagcttaactcagttggtatggataatgtataatatatg 6094462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 13054862 - 13054916
Alignment:
Q  218 tctctgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||| |||| |||| ||||||||||||||| |||| |||||||||||||    
T  13054862 tctctgtccttgtgagcttagcttagttggtagggacaatgcataatatatgcaa 13054916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 299
Target Start/End: Complemental strand, 28832232 - 28832162
Alignment:
Q  229 gtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||| ||||||| |||||||| | | |||| ||||||||||||| || ||||||| |||||||||||||||    
T  28832232 gtgagcttaactcagttggtatgaacaatgcataatatatgcaaggtctgaggttcaaatcccgaccacca 28832162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 227 - 292
Target Start/End: Original strand, 14880826 - 14880891
Alignment:
Q  227 tcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccg 292  Q
    |||||| |||| ||||||| ||||||| |||| ||||||||||||| || ||||||| ||||||||    
T  14880826 tcgtgagcttagcttagttagtagggacaatgcataatatatgcaaggtctgaggttcaaatcccg 14880891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 235 - 292
Target Start/End: Complemental strand, 19396246 - 19396189
Alignment:
Q  235 ttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccg 292  Q
    |||||| ||||||||||||||||| ||||||||||||| || ||| |||| |||||||    
T  19396246 ttaactcagttggtagggataatgcataatatatgcaaggtttgatgtttgaatcccg 19396189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 31979502 - 31979453
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||||||||||||||||||||| || ||| |||| |||||||||    
T  31979502 gtcctcgtgaacttaacttagttggtagagacaatatatattatatgcaa 31979453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 32944729 - 32944806
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||| |||| |||| ||||||||||| ||| |||| |||||||||||||||| || ||||  || |||||||||||    
T  32944729 tgtccttgtgagcttagcttagttggtatggacaatgcataatatatgcaacgtctggggttcgaaccccgaccacca 32944806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 268
Target Start/End: Complemental strand, 16137265 - 16137218
Alignment:
Q  221 ctgtcctcgtgaacttaacttagttggtagggataatgtataatatat 268  Q
    |||||||||||| |||| |||||||||| |||||||||||||| ||||    
T  16137265 ctgtcctcgtgagcttagcttagttggttgggataatgtataaaatat 16137218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 30678881 - 30678834
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatg 269  Q
    ||||||||||| ||||||| |||||||||||| |||| ||||||||||    
T  30678881 tgtcctcgtgagcttaactcagttggtagggacaatgcataatatatg 30678834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 265
Target Start/End: Original strand, 37037340 - 37037383
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataata 265  Q
    ||||||||||| ||||||| |||||||| |||||||||||||||    
T  37037340 tgtcctcgtgagcttaactgagttggtatggataatgtataata 37037383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 41972788 - 41972749
Alignment:
Q  232 aacttaacttagttggtagggataatgtataatatatgca 271  Q
    ||||||||| ||||||||||||||||| ||||||||||||    
T  41972788 aacttaactcagttggtagggataatgcataatatatgca 41972749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 52267757 - 52267832
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccac 297  Q
    ||||||||||| ||||||| |||||||| ||| |||| |||| |||||||| || || | || |||||||||||||    
T  52267757 tgtcctcgtgagcttaactcagttggtaaggacaatgcataaaatatgcaaggtctgggattcaaatcccgaccac 52267832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Complemental strand, 41763223 - 41763173
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||||| |||| || ||||||||||||||||| |||| ||||||||    
T  41763223 tgtcctcgtgagcttagctcagttggtagggataatgcataaaatatgcaa 41763173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 41973248 - 41973298
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||| || ||||||||| |||||||||| |||| |||||||||||||    
T  41973248 tgtcctcgcgagcttaacttaattggtagggacaatgcataatatatgcaa 41973298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Complemental strand, 47719175 - 47719125
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||| ||||| ||||||| |||||||| |||||||| |||||||||||||    
T  47719175 tgtccacgtgagcttaactcagttggtaaggataatgcataatatatgcaa 47719125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 2889989 - 2889944
Alignment:
Q  227 tcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||| ||||||| |||||||||||| |||| |||||||||||||    
T  2889989 tcgtgagcttaactcagttggtagggacaatgcataatatatgcaa 2889944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 299
Target Start/End: Original strand, 3777715 - 3777788
Alignment:
Q  226 ctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||||| ||||||| ||||| || |||||||||||||||||| ||| ||  |||||| ||| | |||||||||    
T  3777715 ctcgtgagcttaactcagttgatatggataatgtataatatatacaaggttcgaggttcaaacctcgaccacca 3777788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 7803398 - 7803459
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtt 283  Q
    |||||||||||  |||||| |||| ||| ||| |||||||||||||||||| || |||||||    
T  7803398 tgtcctcgtgagattaactcagtttgtatggacaatgtataatatatgcaaggtctgaggtt 7803459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 8266254 - 8266193
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtt 283  Q
    ||||||||||| ||||||| |||||||| ||| |||| ||||| ||||||| || |||||||    
T  8266254 tgtcctcgtgatcttaactcagttggtatggacaatgcataatgtatgcaaggtttgaggtt 8266193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 299
Target Start/End: Complemental strand, 16580867 - 16580790
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||| ||||| ||||| | |||||||| ||| |||||||||||||||||| || || ||||  |||||| |||||||    
T  16580867 tgtccccgtgagcttaattcagttggtatggacaatgtataatatatgcaaggtctggggttcgaatcccaaccacca 16580790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 21400090 - 21400041
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||| |||| || |||||||||||| |||| |||||||||||||    
T  21400090 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaa 21400041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 26803518 - 26803469
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||||||||| || |||||||| ||| |||| |||||||||||||    
T  26803518 gtcctcgtgaacttagctcagttggtatggacaatgcataatatatgcaa 26803469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 299
Target Start/End: Complemental strand, 36467093 - 36467016
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||| |||| ||||| | | ||| || ||| |||| ||||||||||||| |||| ||||| |||||||||||||||    
T  36467093 tgtccttgtgagcttaattcaattgatatggacaatgcataatatatgcaaggtataaggttcaaatcccgaccacca 36467016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 37098548 - 37098499
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||| |||| || |||||||||||| |||| |||||||||||||    
T  37098548 gtcctcgtgagcttagctcagttggtagggacaatgaataatatatgcaa 37098499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 37705118 - 37705179
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtt 283  Q
    ||||||||||||||||||| |  ||||| ||| |||| ||||||||||||| || |||||||    
T  37705118 tgtcctcgtgaacttaactcaactggtatggacaatgcataatatatgcaatgtttgaggtt 37705179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 299
Target Start/End: Original strand, 41974774 - 41974831
Alignment:
Q  242 agttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||| ||||||||||| ||||||||||||| || ||||||| ||| |||| ||||||    
T  41974774 agttgatagggataatgcataatatatgcaaggtttgaggttcaaaccccggccacca 41974831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 52043266 - 52043343
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||||||||  ||| || |||||||| |||||||| |||| |||||||| ||  | |||| |||||||||||||||    
T  52043266 tgtcctcgtgagtttagctcagttggtatggataatgcataaaatatgcaatgttcggggttcaaatcccgaccacca 52043343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 4806857 - 4806789
Alignment:
Q  228 cgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgacca 296  Q
    ||||||||||| | ||||||||| || ||||||||||||||| || || ||||||| ||| | ||||||    
T  4806857 cgtgaacttaattcagttggtagagacaatgtataatatatgtaaggtttgaggttcaaacctcgacca 4806789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 299
Target Start/End: Complemental strand, 8269435 - 8269359
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||||||||||||| || |||||||| ||| |||  ||||||||||||| ||  | |||| ||| |||||||||||    
T  8269435 gtcctcgtgaacttagctcagttggtaaggacaatacataatatatgcaaggtccggggttcaaaccccgaccacca 8269359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 299
Target Start/End: Complemental strand, 17139584 - 17139508
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||||||| |||| || |||||||||||| |||| ||||||||| ||| ||  | |||| ||| |||||||||||    
T  17139584 gtcctcgtgagcttagctcagttggtagggacaatgcataatatattcaaggtccggggttcaaaccccgaccacca 17139508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 24978242 - 24978314
Alignment:
Q  227 tcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||| ||||||| ||||||||  ||||||  ||||||||||||| || |  |||| |||||||||||||||    
T  24978242 tcgtgagcttaactcagttggtatagataatacataatatatgcaaggtttagggttcaaatcccgaccacca 24978314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 299
Target Start/End: Original strand, 27533237 - 27533313
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||||||| ||||  | |||||||||||| |||| ||||||||||||| ||  | |||| ||| |||||||||||    
T  27533237 gtcctcgtgagcttagatcagttggtagggacaatgcataatatatgcaaggttcggggttcaaaccccgaccacca 27533313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 29042535 - 29042607
Alignment:
Q  227 tcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||| ||||||||| | ||||||||||||||| |||||||||| ||  |  | |||| |||||||||||||||    
T  29042535 tcgtaaacttaactcaattggtagggataatgcataatatatgtaagatccggggttcaaatcccgaccacca 29042607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 229 - 297
Target Start/End: Original strand, 32560973 - 32561041
Alignment:
Q  229 gtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccac 297  Q
    |||| |||| || |||||||| ||| |||||||||||||||||| ||  | |||| |||||||||||||    
T  32560973 gtgagcttatctcagttggtatggacaatgtataatatatgcaaggtccggggttcaaatcccgaccac 32561041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 299
Target Start/End: Complemental strand, 33153947 - 33153871
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||| |||| ||||||| |||||||||||| |||| |||||||||| || ||  |||||| ||| ||||| |||||    
T  33153947 gtccttgtgagcttaactcagttggtagggacaatgcataatatatgtaaggtccgaggttcaaaccccgaacacca 33153871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 299
Target Start/End: Original strand, 34632163 - 34632239
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||||||| |||| || ||||||||  || ||||||||||||||||||  |  |||||| |||||||| ||||||    
T  34632163 gtcctcgtgagcttagctcagttggtatagacaatgtataatatatgcaagatccgaggttcaaatcccggccacca 34632239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 36 - 64
Target Start/End: Complemental strand, 50239086 - 50239058
Alignment:
Q  36 ttgtcactcaaatggttgttcaaataaca 64  Q
    |||||||||||||||||||||||||||||    
T  50239086 ttgtcactcaaatggttgttcaaataaca 50239058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 21136824 - 21136901
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccaccat 300  Q
    |||| |||||| ||||||| |||||||| ||| |||||||||||||||||| || ||||||| ||||||||||||||||    
T  21136824 tgtcttcgtgagcttaactcagttggtatggacaatgtataatatatgcaaggt-tgaggttcaaatcccgaccaccat 21136901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 3584197 - 3584274
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||||| || |||||||||||||||| ||| |||| ||||||||||||| ||| ||| || ||| |||||||||||    
T  3584197 tgtcctcgcgagcttaacttagttggtaaggacaatgcataatatatgcaaggtacgagattcaaaccccgaccacca 3584274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 21555003 - 21554952
Alignment:
Q  221 ctgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||| |||||| |||||||||||||||||||||||||  ||||||||||||    
T  21555003 ctgtcgtcgtgagcttaacttagttggtagggataatgcttaatatatgcaa 21554952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 299
Target Start/End: Original strand, 10025986 - 10026064
Alignment:
Q  221 ctgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||||||||| ||||||| |||||||  ||| |||| |||| |||||||| ||||| |||| ||| |||||||||||    
T  10025986 ctgtcctcgtgagcttaactcagttggtttggacaatgcataaaatatgcaaggtatggggttcaaaccccgaccacca 10026064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 287
Target Start/End: Original strand, 34773244 - 34773289
Alignment:
Q  242 agttggtagggataatgtataatatatgcaacgtatgaggtttaaa 287  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||    
T  34773244 agttggtagggacaatgcataatatatgcaaggtatgaggtttaaa 34773289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 234 - 295
Target Start/End: Complemental strand, 44941469 - 44941408
Alignment:
Q  234 cttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgacc 295  Q
    ||||||| ||||||||||||||||| ||||||||||||| || | ||||| ||||| |||||    
T  44941469 cttaactcagttggtagggataatgcataatatatgcaaggtttaaggttcaaatcacgacc 44941408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 223 - 299
Target Start/End: Original strand, 6579612 - 6579688
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||||||| ||||||| | |||||| ||| ||||||||| |||||||| || | ||||| ||| |||||||||||    
T  6579612 gtcctcgtgagcttaactcaattggtatggacaatgtataaaatatgcaaggtgtaaggttcaaaccccgaccacca 6579688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 19880070 - 19880019
Alignment:
Q  12 ctactttcctttgtaaattagtgtttgtcactcaaatggttgttcaaataaca 64  Q
    ||||||| |||||||||| |||| | |||||||||||||||||||||||||||    
T  19880070 ctacttttctttgtaaat-agtggtggtcactcaaatggttgttcaaataaca 19880019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 5041332 - 5041382
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||||| ||||||| |||||||| ||| |||| |||||||||||||    
T  5041332 tgtcctcgtgagcttaactgagttggtatggacaatgcataatatatgcaa 5041382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 5833035 - 5833085
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||| ||||| |||| || ||||||||||||||||| |||||||||||||    
T  5833035 tgtccccgtgagcttagctcagttggtagggataatgcataatatatgcaa 5833085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 15135081 - 15135127
Alignment:
Q  226 ctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||| || | ||||||||||||||| ||||||||||||||||||    
T  15135081 ctcgtgagctaatcttagttggtagggacaatgtataatatatgcaa 15135127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Complemental strand, 26816732 - 26816682
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||| ||||| |||| || ||||||||||||||||| |||||||||||||    
T  26816732 tgtccccgtgagcttagctcagttggtagggataatgcataatatatgcaa 26816682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 27263334 - 27263384
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||| ||||||||||||| |||||||| ||| |||| |||||||||||||    
T  27263334 tgtccccgtgaacttaactcagttggtatggacaatgcataatatatgcaa 27263384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 27270228 - 27270278
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||| ||||||||||||| |||||||| ||| |||| |||||||||||||    
T  27270228 tgtccccgtgaacttaactcagttggtatggacaatgcataatatatgcaa 27270278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 32062016 - 32062066
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||||  |||||| ||||||||| || ||||||||||||||||||    
T  32062016 tgtcctcgtgagattaactcagttggtagagacaatgtataatatatgcaa 32062066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 3830062 - 3830111
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||||||||| || |||| ||||||| |||| |||||||||||||    
T  3830062 gtcctcgtgaacttagctcagtttgtagggacaatgcataatatatgcaa 3830111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 5579686 - 5579763
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||| |||| |||| || |||||||||||| | || ||||||||||||| || || |||| ||| |||||||||||    
T  5579686 tgtccttgtgagcttagctcagttggtagggacagtgcataatatatgcaaggtctggggttcaaaccccgaccacca 5579763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 287
Target Start/End: Complemental strand, 21164822 - 21164761
Alignment:
Q  226 ctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaa 287  Q
    ||||||| ||||||| |||||||| |||||||| |||||||||  || || |||||||||||    
T  21164822 ctcgtgagcttaactcagttggtatggataatgcataatatatataaggtttgaggtttaaa 21164761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 21751689 - 21751644
Alignment:
Q  227 tcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||| |||||||||||||||||| | |||| |||||||||||||    
T  21751689 tcgtgagcttaacttagttggtaggaaaaatgcataatatatgcaa 21751644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 27544943 - 27545000
Alignment:
Q  215 tgttctctgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||| ||||| ||||| |||| || |||||||| ||| ||||||||||||||||||    
T  27544943 tgttctttgtccccgtgagcttatctcagttggtaaggacaatgtataatatatgcaa 27545000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 299
Target Start/End: Complemental strand, 35142217 - 35142140
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||||||||| |||| || ||||| || ||| |||| ||||||||||||| || |||||||  || |||||||||||    
T  35142217 tgtcctcgtgagcttagctcagttgatatggacaatgcataatatatgcaaagtttgaggttcgaaccccgaccacca 35142140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 280
Target Start/End: Original strand, 35763699 - 35763756
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgag 280  Q
    |||||||||| ||||||| |||| ||| ||| |||| ||||||||||||| |||||||    
T  35763699 gtcctcgtgagcttaactcagttcgtaaggacaatgcataatatatgcaaagtatgag 35763756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 299
Target Start/End: Complemental strand, 37495986 - 37495909
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||| |||||| ||||||||| ||| ||  ||||||| ||||||||||||| ||   ||||| |||||||||||||||    
T  37495986 tgtcttcgtgagcttaacttaattgatattgataatgcataatatatgcaaggtccaaggttcaaatcccgaccacca 37495909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 272
Target Start/End: Complemental strand, 39458599 - 39458562
Alignment:
Q  235 ttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  39458599 ttaactcagttggtagggataatgcataatatatgcaa 39458562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 44454506 - 44454555
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||| ||||||| |||||||||||| |||| |||| ||||||||    
T  44454506 gtcctcgtgagcttaactcagttggtagggacaatgcataaaatatgcaa 44454555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 299
Target Start/End: Complemental strand, 30006159 - 30006083
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||||||||||||| || |||||||| | |||||| ||||| ||||||| || || |||| ||| ||| |||||||    
T  30006159 gtcctcgtgaacttagctcagttggtatgaataatgcataatgtatgcaaggtttggggttcaaaccccaaccacca 30006083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 36 - 64
Target Start/End: Original strand, 35600821 - 35600849
Alignment:
Q  36 ttgtcactcaaatggttgttcaaataaca 64  Q
    |||||||||||||||||||||||||||||    
T  35600821 ttgtcactcaaatggttgttcaaataaca 35600849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 299
Target Start/End: Complemental strand, 40187703 - 40187627
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||| ||| ||||||| |||||||||||| |||| |||||||||| || || || |||| ||| ||||| |||||    
T  40187703 gtcctcatgagcttaactcagttggtagggacaatgcataatatatgtaaggtctgcggttcaaaccccgaacacca 40187627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 41029271 - 41029343
Alignment:
Q  228 cgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccaccat 300  Q
    ||||| |||| || |||||||| ||| |||||||||||||||||| ||  | ||||  |||||||||||||||    
T  41029271 cgtgagcttagctcagttggtaaggacaatgtataatatatgcaaggtccggggttcgaatcccgaccaccat 41029343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 224 - 272
Target Start/End: Original strand, 41527555 - 41527603
Alignment:
Q  224 tcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||| |||| ||||||||||| ||| |||| |||||||||||||    
T  41527555 tcctcgtgagcttagcttagttggtatggacaatgcataatatatgcaa 41527603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 45421319 - 45421363
Alignment:
Q  227 tcgtgaacttaacttagttggtagggataatgtataatatatgca 271  Q
    ||||||| ||| ||||||||||||||||| || ||||||||||||    
T  45421319 tcgtgaatttatcttagttggtagggatattgcataatatatgca 45421363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 32975170 - 32975221
Alignment:
Q  13 tactttcctttgtaaattagtgtttgtcactcaaatggttgttcaaataaca 64  Q
    ||||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  32975170 tactttcttttgtaaattaatggttgtcactcaaatggttgttcaaataaca 32975221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 11790397 - 11790324
Alignment:
Q  227 tcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccaccat 300  Q
    ||||| |||||||| ||||| |||| | |||| ||||||||| ||| |||||||||| ||||||||||||||||    
T  11790397 tcgtggacttaactcagttgctaggaacaatggataatatatacaaggtatgaggttcaaatcccgaccaccat 11790324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 299
Target Start/End: Complemental strand, 24592913 - 24592837
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||||||||||||| || |||||||||||| |||| ||||||||||||| || || |||| ||| |||| ||||||    
T  24592913 gtcctcgtgaacttagctcagttggtagggacaatgcataatatatgcaaggtctggggttcaaaccccggccacca 24592837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 3104599 - 3104638
Alignment:
Q  13 tactttcctttgtaaattagtgtttgtcactcaaatggtt 52  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  3104599 tactttcctttgtaaattagtggttgtcactcaaatggtt 3104638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 28874620 - 28874545
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccac 297  Q
    ||||||||||  ||||||| ||||||| |||||||||||||| |||||||| ||  | |||| |||||||||||||    
T  28874620 tgtcctcgtgggcttaactcagttggttgggataatgtataaaatatgcaaggttcggggttcaaatcccgaccac 28874545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 31838004 - 31837957
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatg 269  Q
    ||||||||||||||||||| | |||||| |||||||||||||||||||    
T  31838004 tgtcctcgtgaacttaactcaattggtatggataatgtataatatatg 31837957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 224 - 299
Target Start/End: Complemental strand, 36615099 - 36615024
Alignment:
Q  224 tcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||||||| ||||||| |||||||| ||| |||| ||| ||||||||| || | ||||||||| |||||||||||    
T  36615099 tcctcgtgagcttaactcagttggtatggacaatggatagtatatgcaaggtctaaggtttaaaccccgaccacca 36615024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 224 - 299
Target Start/End: Complemental strand, 41939174 - 41939099
Alignment:
Q  224 tcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||||||| |||| |||||||||||||||||||| |||||||||| || || |||| || |||  ||||||||||    
T  41939174 tcctcgtgagcttagcttagttggtagggataatgcataatatatgtaaggtttgagattcaaactccgaccacca 41939099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 10723932 - 10724009
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||||||||| ||||||| |||||||  || ||||| ||||||||||||| || ||||||| ||| |||| ||||||    
T  10723932 tgtcctcgtgagcttaactcagttggtttgggtaatgcataatatatgcaaggtctgaggttcaaaccccggccacca 10724009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 299
Target Start/End: Complemental strand, 21482587 - 21482510
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||||||||  ||| || |||||||| |||||||||||||||||||||| ||  | ||||| || |||||||||||    
T  21482587 tgtcctcgtgagtttagctcagttggtaaggataatgtataatatatgcaaggtccggggtttgaaccccgaccacca 21482510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 27152347 - 27152396
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||| |||| ||||||| ||||||||||||||||| |||||||||||||    
T  27152347 gtccttgtgagcttaactcagttggtagggataatgcataatatatgcaa 27152396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 299
Target Start/End: Complemental strand, 31815951 - 31815878
Alignment:
Q  226 ctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||||| ||||||| |||||||||||| |||| ||||||||||||| ||  | |||| ||| |||||||||||    
T  31815951 ctcgtgagcttaactcagttggtagggacaatgcataatatatgcaaggtccggggttcaaaccccgaccacca 31815878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 299
Target Start/End: Original strand, 44198265 - 44198338
Alignment:
Q  226 ctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||||| ||||||| ||| ||| || |||||| |||||||||| || || || ||||||||||||||||||||    
T  44198265 ctcgtgagcttaactcagtcggtcggtataatgcataatatatgtaaagtttggggtttaaatcccgaccacca 44198338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 36547301 - 36547242
Alignment:
Q  224 tcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtt 283  Q
    |||| |||| |||| || |||||||| |||||||||||||||||||||| || |||||||    
T  36547301 tccttgtgagcttagctcagttggtaaggataatgtataatatatgcaaagtttgaggtt 36547242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 2783000 - 2783050
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||||| ||||  | ||||||||| |||||||||||||||||||||    
T  2783000 tgtcctcgtgagcttagttcagttggtagagataatgtataatatatgcaa 2783050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 4122081 - 4122011
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccg 292  Q
    ||||||||||| |||| || || ||||| ||| |||| ||||||||||||| || || |||||||||||||    
T  4122081 tgtcctcgtgagcttagctcagctggtatggacaatgcataatatatgcaaggtctggggtttaaatcccg 4122011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 7206118 - 7206188
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccg 292  Q
    ||||||||||| |||| || ||||||||| || |||| ||||||||||||| ||  |||||||||| ||||    
T  7206118 tgtcctcgtgagcttagctcagttggtagagacaatgcataatatatgcaaggtccgaggtttaaaccccg 7206188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 20897843 - 20897885
Alignment:
Q  245 tggtagggataatgtataatatatgcaacgtatgaggtttaaa 287  Q
    ||||||||| |||||||||||||||||| || |||||||||||    
T  20897843 tggtagggacaatgtataatatatgcaaggtctgaggtttaaa 20897885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 45032686 - 45032736
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||||| |||| || |||||||||||| |||| |||||||||||||    
T  45032686 tgtcctcgtgagcttacctcagttggtagggacaatgcataatatatgcaa 45032736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 2256965 - 2257014
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||| ||||||| |||||||| ||| |||| |||||||||||||    
T  2256965 gtcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaa 2257014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 4858775 - 4858726
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgca 271  Q
    ||||| |||||||||||||||||||||||||| | || ||||| ||||||    
T  4858775 tgtccccgtgaacttaacttagttggtagggacattgcataatttatgca 4858726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 13196694 - 13196743
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||||||||||| |||||||| | | |||| |||||||||||||    
T  13196694 gtcctcgtgaacttaactcagttggtatgaacaatgcataatatatgcaa 13196743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 299
Target Start/End: Original strand, 17142827 - 17142900
Alignment:
Q  226 ctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||||| |||| || ||||||||| || |||||||||||||||||| || ||  ||| ||| |||||||||||    
T  17142827 ctcgtgagcttagctcagttggtagtgacaatgtataatatatgcaaagtctggagttcaaaccccgaccacca 17142900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 299
Target Start/End: Complemental strand, 22523080 - 22523003
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||||||||| |||| || |||||||| ||| |||  ||||||||||||| ||  |||||| |||||||| ||||||    
T  22523080 tgtcctcgtgagcttagctcagttggtatggacaatacataatatatgcaaggttcgaggttcaaatcccggccacca 22523003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 25395498 - 25395433
Alignment:
Q  234 cttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||||| |||||||||| | |||| ||||||||||||| ||   ||||| |||||||||||||||    
T  25395498 cttaactcagttggtaggaacaatgcataatatatgcaaggttcaaggttcaaatcccgaccacca 25395433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 275
Target Start/End: Complemental strand, 28277744 - 28277691
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgt 275  Q
    |||||||||||  ||| ||||||||||| ||| |||| ||||||||||||||||    
T  28277744 tgtcctcgtgagtttagcttagttggtaaggacaatgcataatatatgcaacgt 28277691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 268
Target Start/End: Original strand, 30089043 - 30089088
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatat 268  Q
    ||||||||||||||| || |||||||||||| |||| |||||||||    
T  30089043 gtcctcgtgaacttagctcagttggtagggacaatgcataatatat 30089088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 268
Target Start/End: Original strand, 30125647 - 30125692
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatat 268  Q
    ||||||||||||||| || |||||||||||| |||| |||||||||    
T  30125647 gtcctcgtgaacttagctcagttggtagggacaatgcataatatat 30125692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 33600790 - 33600749
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataat 264  Q
    |||||||||||||||||| ||||||||| ||||||| |||||    
T  33600790 gtcctcgtgaacttaactcagttggtagagataatgcataat 33600749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 34977198 - 34977247
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||| ||||||| |||||||| ||| |||| |||||||||||||    
T  34977198 gtcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaa 34977247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 299
Target Start/End: Complemental strand, 35372987 - 35372930
Alignment:
Q  242 agttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||||| ||| ||| |||||||||||||| || || ||||||||||||| ||||||    
T  35372987 agttggtaaggacaatatataatatatgcaaggtctggggtttaaatcccgtccacca 35372930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 12303605 - 12303649
Alignment:
Q  255 aatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||||||||||||||| || ||| ||| |||||||||||||||    
T  12303605 aatgtataatatatgcaaggtttgaagttcaaatcccgaccacca 12303649  T

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Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 22608525 - 22608581
Alignment:
Q  227 tcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtt 283  Q
    |||||| |||| || ||||||||| || |||| ||||||||||||| ||||||||||    
T  22608525 tcgtgagcttagctcagttggtagagacaatgcataatatatgcaaggtatgaggtt 22608581  T

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Target: chr4 (Bit Score: 39; Significance: 0.000000000001; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 245 - 299
Target Start/End: Complemental strand, 33758849 - 33758795
Alignment:
Q  245 tggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||||||||||| ||||||||||||| || ||||||||||||||| |||||||    
T  33758849 tggtagggataatgcataatatatgcaaggtctgaggtttaaatcccaaccacca 33758795  T

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Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 237 - 299
Target Start/End: Original strand, 48067141 - 48067203
Alignment:
Q  237 aacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||| |||||||||||| |||||||||||||||||| | |||||||| ||||||||| |||||    
T  48067141 aactcagttggtagggacaatgtataatatatgcaaggcatgaggttcaaatcccgatcacca 48067203  T

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Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 222 - 272
Target Start/End: Complemental strand, 54151693 - 54151643
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||||| ||||||| |||||||| ||||||||||||||||||||||    
T  54151693 tgtcctcgtgagcttaactcagttggtaaggataatgtataatatatgcaa 54151643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 6610258 - 6610331
Alignment:
Q  224 tcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccac 297  Q
    ||||||||||||||||| | || ||| |||||||||||||||||||||| || || |||| ||| |||||||||    
T  6610258 tcctcgtgaacttaactcacttagtatggataatgtataatatatgcaaggtctggggttcaaaccccgaccac 6610331  T

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Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 299
Target Start/End: Complemental strand, 43034409 - 43034333
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||||||| ||||||| |||||||| ||| |||| ||||||||||||| || ||||||| ||| |||| ||||||    
T  43034409 gtcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtctgaggttcaaaccccggccacca 43034333  T

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Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 8494980 - 8495030
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||||||||| || |||||||||||| |||| |||||||||||||    
T  8494980 tgtcctcgtgaacttagctcagttggtagggacaatgcataatatatgcaa 8495030  T

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Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 272
Target Start/End: Complemental strand, 20096338 - 20096288
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||||  |||||| ||||||||||||||||| |||||||||||||    
T  20096338 tgtcctcgtgagtttaactcagttggtagggataatgcataatatatgcaa 20096288  T

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Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 22630428 - 22630350
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccaccat 300  Q
    |||||||||||  ||| || ||||||||| || |||| ||||||||||||| || ||||||| ||| ||||||||||||    
T  22630428 tgtcctcgtgagattatctcagttggtagtgacaatgcataatatatgcaaggtctgaggttcaaaccccgaccaccat 22630350  T

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Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 10069154 - 10069089
Alignment:
Q  224 tcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatc 289  Q
    |||||||||||||| || |||||||| | | |||||||||||||||||| || || ||||||||||    
T  10069154 tcctcgtgaacttagctcagttggtatgaacaatgtataatatatgcaaagtttggggtttaaatc 10069089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 13121538 - 13121587
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||| |||| ||||||||||||||| |||| |||||||||||||    
T  13121538 gtcctcgtgagcttagcttagttggtagggacaatgcataatatatgcaa 13121587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 299
Target Start/End: Complemental strand, 21318321 - 21318244
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||||| || ||||||| |||||||||||| |||| ||||||||||||| || |  |||| ||| |||||||||||    
T  21318321 tgtcctcgcgagcttaactcagttggtagggacaatgcataatatatgcaaggtctagggttcaaaccccgaccacca 21318244  T

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Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 21623487 - 21623422
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaa 287  Q
    |||| |||||||||||  | |||||||||||| |||| ||||||||||||| || |||||||||||    
T  21623487 tgtcttcgtgaacttagttcagttggtagggacaatgcataatatatgcaaggtctgaggtttaaa 21623422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 299
Target Start/End: Complemental strand, 36489456 - 36489379
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||| ||| ||||||| |||||||| |||||| |||| ||||||||||||| ||  | ||||||||||||||| ||||    
T  36489456 tgtcatcgcgaacttagcttagttgttagggacaatgcataatatatgcaaagtcaggggtttaaatcccgactacca 36489379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 36720672 - 36720721
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||||||||||| | |||||||| | ||||||||||||||||||    
T  36720672 gtcctcgtgaacttaactcaattggtaggaacaatgtataatatatgcaa 36720721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 223 - 299
Target Start/End: Original strand, 10082396 - 10082472
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||||||||||||| || |||||||||||| |||  ||||||||| |||  ||||||||| ||| | |||||||||    
T  10082396 gtcctcgtgaacttagctcagttggtagggacaatacataatatatacaagatatgaggttcaaacctcgaccacca 10082472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 228 - 272
Target Start/End: Original strand, 38374956 - 38375000
Alignment:
Q  228 cgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||| |||||||||||||||||||| |||| |||||||||||||    
T  38374956 cgtgagcttaacttagttggtagggacaatgcataatatatgcaa 38375000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 49491181 - 49491228
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatg 269  Q
    ||||||| ||| ||||||||||||| || |||||||||||||||||||    
T  49491181 tgtcctcttgagcttaacttagttgataaggataatgtataatatatg 49491228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 9972122 - 9972172
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||| || |||||||||| ||||| ||| |||||||||||||||||||||    
T  9972122 tgtccccgcgaacttaactcagttgatagagataatgtataatatatgcaa 9972172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 13276122 - 13276172
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||||| ||||||| | |||||||||| |||| |||||||||||||    
T  13276122 tgtcctcgtgagcttaactcaattggtagggacaatgcataatatatgcaa 13276172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Complemental strand, 15170167 - 15170117
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||||||||||||| |||||||| | | |||| |||||||||||||    
T  15170167 tgtcctcgtgaacttaactcagttggtatgaacaatgcataatatatgcaa 15170117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 21052625 - 21052555
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccg 292  Q
    |||||||||||  ||| || |||||||| |||||||  ||||||||||||| ||||||||||  |||||||    
T  21052625 tgtcctcgtgagtttagctcagttggtatggataatacataatatatgcaaggtatgaggttcgaatcccg 21052555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 299
Target Start/End: Complemental strand, 22164338 - 22164260
Alignment:
Q  221 ctgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||||||||||  ||| ||||||||||||| | |||| |||||||||| || || || |||| ||| |||||||||||    
T  22164338 ctgtcctcgtgagtttagcttagttggtaggaacaatgcataatatatgtaaggtctggggttcaaaccccgaccacca 22164260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 226 - 296
Target Start/End: Original strand, 31352109 - 31352179
Alignment:
Q  226 ctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgacca 296  Q
    |||||||||||| || |||||||| ||| |||| |||| |||||||| ||| ||||||  |||||||||||    
T  31352109 ctcgtgaacttagctaagttggtatggacaatgcataaaatatgcaaggtacgaggttcgaatcccgacca 31352179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 230 - 272
Target Start/End: Original strand, 35806363 - 35806404
Alignment:
Q  230 tgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||| ||||| |||||||||||||||||||||||||||    
T  35806363 tgaacttaatttagt-ggtagggataatgtataatatatgcaa 35806404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 229 - 283
Target Start/End: Original strand, 38416057 - 38416111
Alignment:
Q  229 gtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtt 283  Q
    |||| |||| || |||||||| |||||||| ||||||||||||| ||||||||||    
T  38416057 gtgagcttagctcagttggtaaggataatgcataatatatgcaaggtatgaggtt 38416111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Complemental strand, 42344686 - 42344636
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||||| ||||||| | |||||||| | ||||||||||||||||||    
T  42344686 tgtcctcgtgaccttaactcaattggtaggaacaatgtataatatatgcaa 42344636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Complemental strand, 50362207 - 50362157
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||||| |||| || |||||||||||| |||| |||||||||||||    
T  50362207 tgtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaa 50362157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 7490404 - 7490359
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatat 268  Q
    |||||||||| ||||||| ||||||||| || ||||||||||||||    
T  7490404 gtcctcgtgagcttaactcagttggtagagaaaatgtataatatat 7490359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 7967692 - 7967643
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||| |||||||||||| |||  ||||||| |||||||||||||    
T  7967692 gtcctcgtgagcttaacttagttcgtaaagataatgcataatatatgcaa 7967643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 11940864 - 11940811
Alignment:
Q  234 cttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaa 287  Q
    ||||||||||||||||||||||||| ||| |||||| || || ||| |||||||    
T  11940864 cttaacttagttggtagggataatgcatagtatatgtaaagtttgaagtttaaa 11940811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 16733586 - 16733537
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||| ||||||| ||||| ||  |||||||||||||||||||||    
T  16733586 gtcctcgtgagcttaactcagttgataaagataatgtataatatatgcaa 16733537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 20799461 - 20799412
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||| |||| || |||||||||||| |||| |||||||||||||    
T  20799461 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaa 20799412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 23225859 - 23225908
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||||||||||| |||||||||| | |||  |||||||||||||    
T  23225859 gtcctcgtgaacttaactcagttggtaggaacaattcataatatatgcaa 23225908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 269
Target Start/End: Original strand, 26610182 - 26610223
Alignment:
Q  228 cgtgaacttaacttagttggtagggataatgtataatatatg 269  Q
    ||||||||||||| |||||||||||| |||||||||| ||||    
T  26610182 cgtgaacttaactcagttggtagggacaatgtataatttatg 26610223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 299
Target Start/End: Original strand, 30380527 - 30380600
Alignment:
Q  226 ctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||||  |||||| |||||||| ||| |||||||||||||||||| || || ||||  ||| ||||||||||    
T  30380527 ctcgtgagtttaactcagttggtaaggacaatgtataatatatgcaaggtttggggttcgaattccgaccacca 30380600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 31041433 - 31041368
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaa 287  Q
    ||||||||||| ||||||| | |||||||  | |||||||||||||||||| || || ||||||||    
T  31041433 tgtcctcgtgagcttaactcatttggtagaaacaatgtataatatatgcaaggtctggggtttaaa 31041368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 36490561 - 36490638
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||| |||||| |||||||||||||||| ||| |||| ||||| |||||||  |  | |||| |||||||||||||||    
T  36490561 tgtcatcgtgagcttaacttagttggtatggacaatgcataatgtatgcaagatccggggttcaaatcccgaccacca 36490638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 37930903 - 37930838
Alignment:
Q  234 cttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||||| | |||||||| | |||| ||||||||||||| || ||||||| ||| |||||||||||    
T  37930903 cttaactcaattggtaggtacaatgcataatatatgcaaggtctgaggttcaaaccccgaccacca 37930838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 48171886 - 48171951
Alignment:
Q  234 cttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||||| ||||||||| || |||||||||||||||||| ||   ||||| ||| |||||||||||    
T  48171886 cttaactcagttggtagagacaatgtataatatatgcaaggttctaggttcaaaccccgaccacca 48171951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 48251943 - 48251898
Alignment:
Q  255 aatgtataatatatgcaacgtatgaggtttaaatcccgaccaccat 300  Q
    |||||||||||||||||| || ||| |||||||| |||||||||||    
T  48251943 aatgtataatatatgcaaggtttgaagtttaaattccgaccaccat 48251898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 55061030 - 55061107
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||||||||  |||| ||||||||||| ||| |||| ||||||||||||| ||  | |||| |||| ||||||||||    
T  55061030 tgtcctcgtgtgcttagcttagttggtacggacaatgcataatatatgcaaggtcgggggttcaaattccgaccacca 55061107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 56479296 - 56479251
Alignment:
Q  226 ctcgtgaacttaacttagttggtagggataatgtataatatatgca 271  Q
    ||||||||||||||| |||||||||||||| || ||| ||||||||    
T  56479296 ctcgtgaacttaactcagttggtagggatattgcatattatatgca 56479251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 224 - 272
Target Start/End: Complemental strand, 16054603 - 16054555
Alignment:
Q  224 tcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||| |||| |||||||| ||| ||||||| |||||||||||||    
T  16054603 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaa 16054555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 24665061 - 24665009
Alignment:
Q  220 tctgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||||||| |||| || |||||||| ||| |||| |||||||||||||    
T  24665061 tctgtcctcgtgagcttagctcagttggtatggagaatgcataatatatgcaa 24665009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 235 - 271
Target Start/End: Complemental strand, 41897608 - 41897572
Alignment:
Q  235 ttaacttagttggtagggataatgtataatatatgca 271  Q
    ||||||||||||||||||||| || ||||||||||||    
T  41897608 ttaacttagttggtagggatattgcataatatatgca 41897572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 234 - 290
Target Start/End: Original strand, 49579960 - 49580016
Alignment:
Q  234 cttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcc 290  Q
    ||||||| | |||||||||| |||||||||||||||||| || |||  |||||||||    
T  49579960 cttaactcaattggtagggacaatgtataatatatgcaaggtttgaattttaaatcc 49580016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000004; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 19647571 - 19647498
Alignment:
Q  227 tcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccaccat 300  Q
    ||||||||||||||  | ||||||||| ||||||||||||||| || || || |||| ||||||||||||||||    
T  19647571 tcgtgaacttaactcggatggtagggacaatgtataatatatgtaaggtctggggttcaaatcccgaccaccat 19647498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 222 - 275
Target Start/End: Original strand, 31198702 - 31198755
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgt 275  Q
    ||||||||||| ||||||| |||||||| |||||||| ||||||||||||||||    
T  31198702 tgtcctcgtgatcttaactcagttggtaaggataatgcataatatatgcaacgt 31198755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 227 - 290
Target Start/End: Complemental strand, 5974288 - 5974225
Alignment:
Q  227 tcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcc 290  Q
    |||||||||||||| ||| | ||||||||||| ||||||||||||| || ||||||| ||||||    
T  5974288 tcgtgaacttaactcagtcgatagggataatgcataatatatgcaaggtctgaggttcaaatcc 5974225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 272
Target Start/End: Complemental strand, 33645757 - 33645707
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||||| ||||||| |||||||| ||| ||||||||||||||||||    
T  33645757 tgtcctcgtgagcttaactcagttggtatggacaatgtataatatatgcaa 33645707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 34436840 - 34436894
Alignment:
Q  218 tctctgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||||||||| |||| || |||||||||||| |||| |||||||||||||    
T  34436840 tctctgtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaa 34436894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 41417760 - 41417806
Alignment:
Q  226 ctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||||||  | |||||||||||||||||||||||||||||||    
T  41417760 ctcgtgaacttagttcagttggtagggataatgtataatatatgcaa 41417806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 235 - 272
Target Start/End: Complemental strand, 2642818 - 2642781
Alignment:
Q  235 ttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||||||||||||||||| |||||||||||||    
T  2642818 ttaacttagttggtagggataatgcataatatatgcaa 2642781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 6489000 - 6489077
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||||||||| |||| || |||||||||||| |||| ||||||||||||| || || |||| ||| |||| ||||||    
T  6489000 tgtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtctggggttcaaaccccggccacca 6489077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 223 - 299
Target Start/End: Original strand, 15889405 - 15889481
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||||||| |||| || |||||||||||| |||| ||||||||||||| || |  |||| ||| |||||||||||    
T  15889405 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtctagggttcaaaccccgaccacca 15889481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 221 - 277
Target Start/End: Original strand, 20211272 - 20211328
Alignment:
Q  221 ctgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtat 277  Q
    |||||||||||| |||| || ||||||||||||||||  ||||||||||||| ||||    
T  20211272 ctgtcctcgtgagcttatctcagttggtagggataatacataatatatgcaaggtat 20211328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 689540 - 689587
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatg 269  Q
    ||||||||||||||||||| ||||| || ||| |||||||||||||||    
T  689540 tgtcctcgtgaacttaactcagttgatatggacaatgtataatatatg 689587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 5107310 - 5107235
Alignment:
Q  225 cctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccaccat 300  Q
    |||||||| ||||||| |||||||| | |||||| ||||||||||||| ||  ||||||  || ||||||||||||    
T  5107310 cctcgtgagcttaactcagttggtatgaataatgcataatatatgcaaggtccgaggttcgaaccccgaccaccat 5107235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 299
Target Start/End: Original strand, 11647196 - 11647267
Alignment:
Q  228 cgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||||||||||| |||||||| ||| |||| ||||||||||||| || || ||||  ||||| ||||||||    
T  11647196 cgtgaacttaactcagttggtaaggacaatgcataatatatgcaaggtttggggttcgaatcctgaccacca 11647267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 33952842 - 33952799
Alignment:
Q  228 cgtgaacttaacttagttggtagggataatgtataatatatgca 271  Q
    |||||||||| || ||||||||||||||||| ||||||||||||    
T  33952842 cgtgaacttagctcagttggtagggataatgaataatatatgca 33952799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 40837971 - 40837896
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccac 297  Q
    ||||||||||||||||||| |||||||| ||| ||| ||||| |||||||| ||  | |||| ||| |||||||||    
T  40837971 tgtcctcgtgaacttaactcagttggtatggacaatatataaaatatgcaaggtccggggttcaaaccccgaccac 40837896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Complemental strand, 1808661 - 1808611
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||||||||| || |||||||| |||||||| |||| ||||||||    
T  1808661 tgtcctcgtgaacttagctcagttggtatggataatgcataaaatatgcaa 1808611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 7112588 - 7112654
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatc 289  Q
    |||||||||| ||||||| | |||||||||||||  ||||||||||| || || ||||||| |||||    
T  7112588 gtcctcgtgagcttaactcaattggtagggataaaatataatatatgtaaggtctgaggttcaaatc 7112654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 242 - 292
Target Start/End: Original strand, 11017189 - 11017239
Alignment:
Q  242 agttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccg 292  Q
    ||||||||||||||||| ||||||||||||| || |||||||  |||||||    
T  11017189 agttggtagggataatgcataatatatgcaaggtctgaggttcgaatcccg 11017239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 229 - 299
Target Start/End: Original strand, 20114705 - 20114775
Alignment:
Q  229 gtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||||||| || |||||||| ||| |||| |||| |||| ||| || ||||||| |||||||||||||||    
T  20114705 gtgaacttagctcagttggtaaggacaatgcataaaatatacaaagtttgaggttcaaatcccgaccacca 20114775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 268
Target Start/End: Complemental strand, 20370198 - 20370152
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatat 268  Q
    ||||||||||| |||| || ||||||||||||||||| |||||||||    
T  20370198 tgtcctcgtgagcttagctcagttggtagggataatgcataatatat 20370152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 33654741 - 33654791
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||| |||||| ||||||| |||||||||||| |||| |||||||||||||    
T  33654741 tgtcatcgtgagcttaactcagttggtagggacaatgcataatatatgcaa 33654791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 36564494 - 36564448
Alignment:
Q  224 tcctcgtgaacttaacttagttggtagggataatgtataatatatgc 270  Q
    ||||||||| ||||||||| |||||||| ||| ||||||||||||||    
T  36564494 tcctcgtgagcttaacttaattggtaggaatattgtataatatatgc 36564448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 38495135 - 38495185
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||| |||||||||||| |||||||| |||||||| |||| ||||||||    
T  38495135 tgtccttgtgaacttaactcagttggtatggataatgcataaaatatgcaa 38495185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 5485180 - 5485229
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||| |||| || |||||||||||| |||| |||||||||||||    
T  5485180 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaa 5485229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 11720888 - 11720937
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||| |||| ||||||| |||||||||||| |||| |||||||||||||    
T  11720888 gtccttgtgagcttaactcagttggtagggacaatgcataatatatgcaa 11720937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 268
Target Start/End: Original strand, 14124299 - 14124340
Alignment:
Q  227 tcgtgaacttaacttagttggtagggataatgtataatatat 268  Q
    ||||||||||||||||||||||| ||| |||| |||||||||    
T  14124299 tcgtgaacttaacttagttggtaaggacaatgcataatatat 14124340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 24485693 - 24485742
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||| |||| ||||||||||| ||| |||| |||||||||||||    
T  24485693 gtcctcgtgagcttagcttagttggtatggacaatgcataatatatgcaa 24485742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 30893926 - 30893987
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtt 283  Q
    ||||||||||| ||||||| |||| |||  || |||| ||||||||||||| ||||||||||    
T  30893926 tgtcctcgtgagcttaactcagtttgtaaagacaatgcataatatatgcaaggtatgaggtt 30893987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 40445976 - 40446053
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||||||||  |||||| ||||| || ||| |||| ||||||||||||| || ||||||| ||||| ||| |||||    
T  40445976 tgtcctcgtgagtttaactcagttgataaggacaatgcataatatatgcaaggtctgaggttcaaatctcgatcacca 40446053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 228 - 272
Target Start/End: Original strand, 3671217 - 3671261
Alignment:
Q  228 cgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||| ||||||| ||||| || ||||||||||||||||||||||    
T  3671217 cgtgagcttaactcagttgataaggataatgtataatatatgcaa 3671261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 5998956 - 5998988
Alignment:
Q  240 ttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||||||| ||||||||||||||||||    
T  5998956 ttagttggtagggacaatgtataatatatgcaa 5998988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 228 - 272
Target Start/End: Original strand, 6898020 - 6898064
Alignment:
Q  228 cgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||| ||||||||||||||||  ||||||| |||||||||||||    
T  6898020 cgtgagcttaacttagttggtaaagataatgcataatatatgcaa 6898064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 224 - 272
Target Start/End: Complemental strand, 16701647 - 16701599
Alignment:
Q  224 tcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||| |||| || |||||||||||| |||| |||||||||||||    
T  16701647 tcctcgtgagcttagctcagttggtagggacaatgaataatatatgcaa 16701599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000006; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 226 - 269
Target Start/End: Complemental strand, 17035977 - 17035934
Alignment:
Q  226 ctcgtgaacttaacttagttggtagggataatgtataatatatg 269  Q
    |||||||| ||||||||||||||| |||||||||||||||||||    
T  17035977 ctcgtgaatttaacttagttggtaaggataatgtataatatatg 17035934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 48315091 - 48315017
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccac 297  Q
    |||||||||| |||| || |||||||| |||||||| ||||||||||||| ||  | |||| |||||||||||||    
T  48315091 gtcctcgtgagcttagctcagttggtaaggataatgcataatatatgcaaggtccggggttcaaatcccgaccac 48315017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 48924391 - 48924341
Alignment:
Q  218 tctctgtcctcgtgaacttaacttagttggtagggataatgtataatatat 268  Q
    |||||||||||||||  ||| ||||||||||||||| ||||||||||||||    
T  48924391 tctctgtcctcgtgagtttagcttagttggtagggacaatgtataatatat 48924341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 272
Target Start/End: Complemental strand, 51250301 - 51250251
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||||| ||||||| |||||||| ||| ||||||||||||||||||    
T  51250301 tgtcctcgtgagcttaactcagttggtaaggacaatgtataatatatgcaa 51250251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 275
Target Start/End: Complemental strand, 1757737 - 1757684
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgt 275  Q
    ||||||||||| ||||||| |||||||||| | |||| ||||||||||||||||    
T  1757737 tgtcctcgtgagcttaactcagttggtaggaacaatgcataatatatgcaacgt 1757684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 2105765 - 2105716
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||||||||||| ||||||||   ||||||||||||||||||||    
T  2105765 gtcctcgtgaacttaactcagttggtaaaaataatgtataatatatgcaa 2105716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 27432227 - 27432288
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtt 283  Q
    |||||||||||||||||||||||||||| | | |||| |||||||||| || ||||| ||||    
T  27432227 tgtcctcgtgaacttaacttagttggtatgtacaatgcataatatatgtaaggtatggggtt 27432288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 33771684 - 33771733
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||| ||||||| |||||||| ||| ||||||||||||||||||    
T  33771684 gtcctcgtgagcttaactcagttggtaaggacaatgtataatatatgcaa 33771733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 291
Target Start/End: Original strand, 36431822 - 36431871
Alignment:
Q  242 agttggtagggataatgtataatatatgcaacgtatgaggtttaaatccc 291  Q
    ||||||||||||||||||||||||||||||| || || |||| |||||||    
T  36431822 agttggtagggataatgtataatatatgcaatgtctggggttcaaatccc 36431871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 223 - 299
Target Start/End: Complemental strand, 7464558 - 7464482
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||||||| ||||||| |||||||||||| |||| |||||||||| || ||  | |||| ||| |||||||||||    
T  7464558 gtcctcgtgagcttaactcagttggtagggacaatgcataatatatgtaaggtccggggttcaaaccccgaccacca 7464482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 14771330 - 14771394
Alignment:
Q  228 cgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccg 292  Q
    ||||||||||||| |||| ||||| |||||| ||||||||||||| || |||||||  |||||||    
T  14771330 cgtgaacttaactcagttagtaggcataatgcataatatatgcaaggtctgaggttcgaatcccg 14771394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 271
Target Start/End: Original strand, 11436502 - 11436549
Alignment:
Q  224 tcctcgtgaacttaacttagttggtagggataatgtataatatatgca 271  Q
    ||||||||||||||||| |||||||||||||| || ||| ||||||||    
T  11436502 tcctcgtgaacttaactcagttggtagggatattgcatattatatgca 11436549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 53633685 - 53633638
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatg 269  Q
    ||||||||||| ||||||| |||||||| |||||||| ||||||||||    
T  53633685 tgtcctcgtgagcttaactcagttggtaaggataatgcataatatatg 53633638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 2078237 - 2078283
Alignment:
Q  226 ctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||||||||| ||||||||| || |||| |||||||||||||    
T  2078237 ctcgtgaacttaactcagttggtagagacaatgcataatatatgcaa 2078283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 7738662 - 7738712
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||||| ||||||| |||||||||||| |||| |||| ||||||||    
T  7738662 tgtcctcgtgagcttaactcagttggtagggacaatgcataaaatatgcaa 7738712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 21967553 - 21967599
Alignment:
Q  226 ctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||| ||||||| |||||||| ||| ||||||||||||||||||    
T  21967553 ctcgtgagcttaactcagttggtaaggacaatgtataatatatgcaa 21967599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 21989989 - 21990035
Alignment:
Q  226 ctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||| ||||||| |||||||| ||| ||||||||||||||||||    
T  21989989 ctcgtgagcttaactcagttggtaaggacaatgtataatatatgcaa 21990035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 18870792 - 18870743
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||| |||| || |||||||||||| |||| |||||||||||||    
T  18870792 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaa 18870743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 269
Target Start/End: Complemental strand, 25279131 - 25279086
Alignment:
Q  224 tcctcgtgaacttaacttagttggtagggataatgtataatatatg 269  Q
    ||||||||| |||| ||||||||||||||||| |||||| ||||||    
T  25279131 tcctcgtgagcttagcttagttggtagggatattgtatattatatg 25279086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 34899090 - 34899167
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||||||||| |||| || |||| ||||||| |||| ||||||||||||| ||  | |||| ||| |||||||||||    
T  34899090 tgtcctcgtgatcttagctcagttcgtagggacaatgcataatatatgcaaggtccggggttcaaaccccgaccacca 34899167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 272
Target Start/End: Complemental strand, 35126324 - 35126287
Alignment:
Q  235 ttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  35126324 ttaactcagttggtagggataatgcataatatatgcaa 35126287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 275
Target Start/End: Original strand, 41474516 - 41474565
Alignment:
Q  226 ctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgt 275  Q
    ||||||| |||| || |||| ||||| |||||||||||||||||||||||    
T  41474516 ctcgtgaccttagctcagtttgtaggaataatgtataatatatgcaacgt 41474565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 52337409 - 52337364
Alignment:
Q  227 tcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||||||| ||||||| || ||||||||||| ||||||||    
T  52337409 tcgtgaacttaactcagttggtcggaataatgtataaaatatgcaa 52337364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 1149139 - 1149087
Alignment:
Q  220 tctgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||||||| |||| || |||||||| ||| |||| |||||||||||||    
T  1149139 tctgtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaa 1149087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 228 - 272
Target Start/End: Complemental strand, 10922370 - 10922326
Alignment:
Q  228 cgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||| ||||||| |||||||||||| |||| |||||||||||||    
T  10922370 cgtgagcttaactcagttggtagggacaatgcataatatatgcaa 10922326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 12131708 - 12131664
Alignment:
Q  255 aatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||| ||||||||| ||| |||||||||||||| |||||||||||    
T  12131708 aatgcataatatatacaaggtatgaggtttaaaccccgaccacca 12131664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 17588353 - 17588405
Alignment:
Q  220 tctgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||| ||||| ||||||| |||||||| ||| |||| |||||||||||||    
T  17588353 tctgtccccgtgagcttaactcagttggtaaggacaatgcataatatatgcaa 17588405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 19883078 - 19883130
Alignment:
Q  220 tctgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||| ||||||  ||||||||||||||| |||||||| |||| ||||||||    
T  19883078 tctgtcatcgtgagtttaacttagttggtatggataatgcataaaatatgcaa 19883130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 36 - 64
Target Start/End: Complemental strand, 23770667 - 23770639
Alignment:
Q  36 ttgtcactcaaatggttgttcaaataaca 64  Q
    |||||||||||||||||||||||||||||    
T  23770667 ttgtcactcaaatggttgttcaaataaca 23770639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 30912882 - 30912822
Alignment:
Q  224 tcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggttt 284  Q
    ||||||||| |||||||||||||||| ||| |||  |||| |||||||| || ||||||||    
T  30912882 tcctcgtgagcttaacttagttggtatggacaattcataaaatatgcaaggtctgaggttt 30912822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 224 - 292
Target Start/End: Complemental strand, 37921064 - 37920996
Alignment:
Q  224 tcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccg 292  Q
    |||||||||  ||| || ||||| ||||||||||| ||||||||||||| || || |||| ||||||||    
T  37921064 tcctcgtgagtttagctcagttgatagggataatgcataatatatgcaatgtctgcggttcaaatcccg 37920996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 36 - 64
Target Start/End: Complemental strand, 41670503 - 41670475
Alignment:
Q  36 ttgtcactcaaatggttgttcaaataaca 64  Q
    |||||||||||||||||||||||||||||    
T  41670503 ttgtcactcaaatggttgttcaaataaca 41670475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 299
Target Start/End: Complemental strand, 52543759 - 52543683
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||| ||| |||||||||||||||||| | |||| |||||||||| || || || |||| |||||| ||| ||||    
T  52543759 gtcctcttgagcttaacttagttggtaggaacaatgcataatatatgtaaagtgtggggttcaaatccagactacca 52543683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 55322666 - 55322622
Alignment:
Q  20 ctttgtaaattagtgtttgtcactcaaatggttgttcaaataaca 64  Q
    |||||||||||  || ||||||| |||||||||||||||||||||    
T  55322666 ctttgtaaatttatggttgtcacacaaatggttgttcaaataaca 55322622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 272
Target Start/End: Complemental strand, 17831 - 17789
Alignment:
Q  230 tgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  17831 tgaacttaacttagttggtagggaaaatgcataatatatgcaa 17789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 35; Significance: 0.0000000002; HSPs: 3)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 42211 - 42261
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||| |||||||||||| ||||||| ||| |||||||||||||||||||||    
T  42211 tgtcatcgtgaacttaatttagttgatagagataatgtataatatatgcaa 42261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 283
Target Start/End: Original strand, 63856 - 63916
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtt 283  Q
    ||||||||||  ||| || |||||||||||| |||||||||||||| ||| || |||||||    
T  63856 gtcctcgtgagtttagctcagttggtagggacaatgtataatatatacaaagtttgaggtt 63916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 283
Target Start/End: Original strand, 71188 - 71248
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtt 283  Q
    ||||||||||  ||| || |||||||||||| |||||||||||||| ||| || |||||||    
T  71188 gtcctcgtgagtttagctcagttggtagggacaatgtataatatatacaaagtttgaggtt 71248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000002; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 296
Target Start/End: Original strand, 37938488 - 37938562
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgacca 296  Q
    |||||||||||  ||| || |||||||| |||||||| ||||||||||||| ||  |||||| ||||||||||||    
T  37938488 tgtcctcgtgagtttagctcagttggtatggataatgcataatatatgcaaagtccgaggttcaaatcccgacca 37938562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 37999487 - 37999433
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtat 277  Q
    |||||||||| ||||||| |||||||| |||||||| ||||||||||||| ||||    
T  37999487 gtcctcgtgagcttaactcagttggtatggataatgcataatatatgcaaggtat 37999433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 45407190 - 45407240
Alignment:
Q  12 ctactttcctttgtaaattagtgtttgtcactcaaatggttgttcaaataa 62  Q
    ||||||||||||||||||||||  ||||||||||| || ||||||||||||    
T  45407190 ctactttcctttgtaaattagtagttgtcactcaattgattgttcaaataa 45407240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 223 - 300
Target Start/End: Original strand, 11708980 - 11709057
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccaccat 300  Q
    |||||||||| |||| || |||||||||||| |||| ||||||||||||| ||  || ||| ||| ||||||||||||    
T  11708980 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccgaagttcaaaccccgaccaccat 11709057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 29186495 - 29186572
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||| |||||| || |||| |||||||| ||| ||||  |||||||||||| |||||||||| |||||| ||||||||    
T  29186495 tgtcatcgtgagctcaactcagttggtaaggacaatgcgtaatatatgcaaggtatgaggttcaaatcctgaccacca 29186572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 223 - 283
Target Start/End: Complemental strand, 13357508 - 13357448
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtt 283  Q
    |||||||||| ||||||| |||||||| ||| |||| ||||||||||||| ||| ||||||    
T  13357508 gtcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtacgaggtt 13357448  T

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Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 34873950 - 34874002
Alignment:
Q  12 ctactttcctttgtaaattagtgtttgtcactcaaatggttgttcaaataaca 64  Q
    ||||||||||||||||||||||  |||||| |||| || ||||||||||||||    
T  34873950 ctactttcctttgtaaattagtagttgtcattcaattgattgttcaaataaca 34874002  T

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Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 29924990 - 29924935
Alignment:
Q  217 ttctctgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||| ||||||||||||||||||||||||| || | | |||| |||||||||||||    
T  29924990 ttctttgtcctcgtgaacttaacttagttgttaagaacaatgcataatatatgcaa 29924935  T

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Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 39821876 - 39821927
Alignment:
Q  221 ctgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||||| |||| || |||||||||||| |||| |||||||||||||    
T  39821876 ctgtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaa 39821927  T

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Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 7553672 - 7553722
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||||  |||||| |||||||||||| |||| |||||||||||||    
T  7553672 tgtcctcgtgagtttaactcagttggtagggacaatgcataatatatgcaa 7553722  T

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Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 268
Target Start/End: Original strand, 8687859 - 8687905
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatat 268  Q
    |||||||||||| |||||| | |||||||||| ||||||||||||||    
T  8687859 tgtcctcgtgaatttaactcaattggtagggacaatgtataatatat 8687905  T

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Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 234 - 272
Target Start/End: Complemental strand, 8984550 - 8984512
Alignment:
Q  234 cttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  8984550 cttaactcagttggtatggataatgtataatatatgcaa 8984512  T

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Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 23816783 - 23816833
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||||| |||| || |||||||| |||||||| |||||||||||||    
T  23816783 tgtcctcgtgagcttagctcagttggtaaggataatgcataatatatgcaa 23816833  T

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Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 31086066 - 31086116
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||||||||||||||||||  |  ||||||||||||| |||||||    
T  31086066 tgtcctcgtgaacttaacttagttgacaaagataatgtataatgtatgcaa 31086116  T

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Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 32192887 - 32192937
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||| ||||| ||||||||||| ||| |||| |||||||||||||    
T  32192887 tgtcctcgtggacttagcttagttggtatggacaatgcataatatatgcaa 32192937  T

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Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Complemental strand, 33451417 - 33451367
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||||| |||| || |||||||| |||||||| |||||||||||||    
T  33451417 tgtcctcgtgagcttagctcagttggtatggataatgcataatatatgcaa 33451367  T

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Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 271
Target Start/End: Complemental strand, 42200731 - 42200681
Alignment:
Q  221 ctgtcctcgtgaacttaacttagttggtagggataatgtataatatatgca 271  Q
    |||||||||||| |||| || ||||| |||||| |||||||||||||||||    
T  42200731 ctgtcctcgtgagcttagctcagttgatagggacaatgtataatatatgca 42200681  T

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Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 300
Target Start/End: Original strand, 21557427 - 21557504
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccaccat 300  Q
    |||||||||| ||||||| |||| ||| ||| |||| |||||||||| || ||  ||||||  |||||||||||||||    
T  21557427 gtcctcgtgagcttaactcagttagtatggacaatgcataatatatgtaaggtccgaggttcgaatcccgaccaccat 21557504  T

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Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 269
Target Start/End: Original strand, 23692418 - 23692463
Alignment:
Q  224 tcctcgtgaacttaacttagttggtagggataatgtataatatatg 269  Q
    ||||||||| ||||||| |||||| |||||||||||||| ||||||    
T  23692418 tcctcgtgagcttaactcagttgggagggataatgtatattatatg 23692463  T

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Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 29376894 - 29376971
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||||||||| ||||||| |||||||| ||| ||||  |||||||||||| || ||  ||| ||| |||||||||||    
T  29376894 tgtcctcgtgagcttaactcagttggtatggacaatgcgtaatatatgcaaggtctggagttcaaaccccgaccacca 29376971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 31664072 - 31664028
Alignment:
Q  227 tcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||| ||||||||||| ||| |||||||||||||||||||||||||    
T  31664072 tcgtaaacttaacttaattg-tagggataatgtataatatatgcaa 31664028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 34968549 - 34968598
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||||| || || |||||||| |||||||| |||||||||||||    
T  34968549 gtcctcgtgaacctagctcagttggtatggataatgcataatatatgcaa 34968598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 283
Target Start/End: Original strand, 42700502 - 42700559
Alignment:
Q  226 ctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtt 283  Q
    ||||||| |||||||  |||||||| || |||| ||||||||||||| ||||||||||    
T  42700502 ctcgtgagcttaactcggttggtagagacaatgcataatatatgcaaggtatgaggtt 42700559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 228 - 272
Target Start/End: Complemental strand, 15079214 - 15079170
Alignment:
Q  228 cgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||| ||||||| |||||||||||| |||| |||||||||||||    
T  15079214 cgtgagcttaactcagttggtagggacaatgcataatatatgcaa 15079170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 18942912 - 18942960
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgca 271  Q
    ||||| |||| |||| || ||||||||||||||||| ||||||||||||    
T  18942912 gtccttgtgagcttagctcagttggtagggataatgcataatatatgca 18942960  T

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Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 26252360 - 26252408
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgca 271  Q
    |||||||||| |||| ||||||||||  ||||||||||||| |||||||    
T  26252360 gtcctcgtgagcttagcttagttggtttggataatgtataaaatatgca 26252408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 30071579 - 30071507
Alignment:
Q  227 tcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||||||||||||||||| || | | |||| ||||||||| ||| || |||||||  || |||||||||||    
T  30071579 tcgtgaacttaacttagttgataagaacaatgcataatatatacaaggtttgaggttctaaccccgaccacca 30071507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 39756963 - 39757011
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgca 271  Q
    |||| ||||| ||||||||||||||||   |||||||||||||||||||    
T  39756963 gtccacgtgagcttaacttagttggtaaaaataatgtataatatatgca 39757011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 41472504 - 41472548
Alignment:
Q  255 aatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||||||||||||||| ||  ||||||||||| ||||||||||    
T  41472504 aatgtataatatatgcaaggttcgaggtttaaattccgaccacca 41472548  T

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Target: scaffold0050 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 299
Target Start/End: Complemental strand, 53446 - 53371
Alignment:
Q  224 tcctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    ||||||||| ||||||| |||||| ||||| |||| |||| |||||||| || || |||| ||| |||||||||||    
T  53446 tcctcgtgagcttaactcagttggaagggacaatgcataaaatatgcaaggtctggggttcaaaccccgaccacca 53371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 45936 - 45986
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||| |||||||||| || |||||||| | ||||||||||||||||||||    
T  45936 tgtccccgtgaacttagctcagttggtaagaataatgtataatatatgcaa 45986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 56777 - 56827
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||||| |||| || |||||||| ||| ||||||||||||||||||    
T  56777 tgtcctcgtgagcttagctcagttggtatggacaatgtataatatatgcaa 56827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 119562 - 119612
Alignment:
Q  222 tgtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    ||||||||||| ||||||| ||||| |||||| |||||||||||| |||||    
T  119562 tgtcctcgtgagcttaactcagttgatagggacaatgtataatatttgcaa 119612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 15997 - 15948
Alignment:
Q  223 gtcctcgtgaacttaacttagttggtagggataatgtataatatatgcaa 272  Q
    |||||||||| ||||||| | |||||| ||| ||||||||||||||||||    
T  15997 gtcctcgtgagcttaactcaattggtaaggacaatgtataatatatgcaa 15948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 299
Target Start/End: Complemental strand, 14250 - 14177
Alignment:
Q  226 ctcgtgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgaccacca 299  Q
    |||||||  |||||| |||||||| | | |||| ||||||||||||| ||||| |||| ||| |||||||||||    
T  14250 ctcgtgagtttaactcagttggtatgaacaatgcataatatatgcaaggtatgtggttcaaaccccgaccacca 14177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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