View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4789_high_27 (Length: 241)
Name: NF4789_high_27
Description: NF4789
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4789_high_27 |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 17 - 224
Target Start/End: Complemental strand, 41377868 - 41377661
Alignment:
| Q |
17 |
gcaaagggacctagacattggggtgatctcaaaagagaatgggcagcttgtaaaggggagatgcaatctccaattgatttgtcgagtgacagagtgagtg |
116 |
Q |
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| T |
41377868 |
gcaaagggacctagacattggggtgatctcaaaagagaatgggcagcttgtaaaggggagatgcaatctccaattgatttgtcgagtgacagagtgagtg |
41377769 |
T |
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| Q |
117 |
tgatgatcccagagtttggggagctaaagaggaactacaagcctcaacatgctactatatccaacaggggtcatgatgttgcagtaagtacataaacatt |
216 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41377768 |
tgatgatcccagagtttggggatctaaagaggaactacaagcctcaacatgctactatatccaacaggggtcatgatgttgcagtaagtacataaacatt |
41377669 |
T |
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| Q |
217 |
atttattg |
224 |
Q |
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|||||||| |
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| T |
41377668 |
atttattg |
41377661 |
T |
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