View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4789_high_34 (Length: 212)
Name: NF4789_high_34
Description: NF4789
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4789_high_34 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 41660015 - 41659804
Alignment:
| Q |
1 |
tcaagaaaagaataatgtaacattaaccattctacaccaagagagatagaaatagtggtaacgactaatgatgtgaaatatacgatagaaagagaaatag |
100 |
Q |
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| T |
41660015 |
tcaagaaaagaataatgtaacattaaccattctacaccaagagagatagaaatagtggtaacgactaatgatgtgaaatatacgatagaaagagaaatag |
41659916 |
T |
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| Q |
101 |
agagaaaatgagctagtgtttaataaatgtaagaaaattaagggtatacagctataaaggttggaagaataattgggatccttgctcttttaggtgggtt |
200 |
Q |
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| T |
41659915 |
agagaaaatgagctagtgtttaataaatgtaagaaaattaagggtatacagctataaaggttggaagaataattgggatccttgctcttttaggtgggtt |
41659816 |
T |
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| Q |
201 |
tttaattggtcc |
212 |
Q |
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|||||||||||| |
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| T |
41659815 |
tttaattggtcc |
41659804 |
T |
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