View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4790_low_7 (Length: 208)

Name: NF4790_low_7
Description: NF4790
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4790_low_7
NF4790_low_7
[»] chr2 (41 HSPs)
chr2 (1-187)||(44219790-44219981)
chr2 (1-188)||(20127882-20128075)
chr2 (1-187)||(13399628-13399820)
chr2 (1-187)||(11539784-11539976)
chr2 (1-187)||(43160218-43160410)
chr2 (1-187)||(6949598-6949790)
chr2 (1-188)||(4809087-4809280)
chr2 (1-180)||(15550882-15551067)
chr2 (1-187)||(33920820-33921011)
chr2 (1-187)||(43215855-43216047)
chr2 (1-187)||(38008159-38008351)
chr2 (1-187)||(63103-63296)
chr2 (1-187)||(4355963-4356156)
chr2 (4-181)||(32418368-32418551)
chr2 (1-187)||(16953083-16953272)
chr2 (28-187)||(13315643-13315807)
chr2 (1-187)||(42192386-42192580)
chr2 (4-119)||(22445847-22445964)
chr2 (19-119)||(25335826-25335926)
chr2 (3-70)||(5560818-5560886)
chr2 (1-70)||(649734-649803)
chr2 (119-188)||(20128070-20128138)
chr2 (119-187)||(4809025-4809092)
chr2 (119-187)||(6949785-6949852)
chr2 (119-187)||(16175682-16175749)
chr2 (119-187)||(38008097-38008164)
chr2 (119-187)||(43160156-43160223)
chr2 (119-187)||(63291-63358)
chr2 (119-187)||(4355901-4355968)
chr2 (63-119)||(5560175-5560230)
chr2 (119-187)||(5560883-5560950)
chr2 (119-187)||(9330127-9330194)
chr2 (119-187)||(11539971-11540038)
chr2 (119-187)||(16953267-16953334)
chr2 (119-187)||(42192575-42192642)
chr2 (124-187)||(22445786-22445848)
chr2 (119-187)||(239498-239565)
chr2 (76-112)||(16175593-16175629)
chr2 (126-166)||(24140004-24140043)
chr2 (119-187)||(33920758-33920825)
chr2 (119-187)||(43216042-43216109)
[»] chr4 (38 HSPs)
chr4 (1-187)||(14440036-14440228)
chr4 (1-187)||(34789528-34789720)
chr4 (1-186)||(54440777-54440968)
chr4 (1-187)||(35643713-35643905)
chr4 (1-187)||(46736863-46737055)
chr4 (1-181)||(28465289-28465475)
chr4 (3-187)||(45838757-45838947)
chr4 (1-187)||(26974430-26974622)
chr4 (1-187)||(33777768-33777960)
chr4 (1-187)||(6616819-6617010)
chr4 (1-187)||(34807347-34807539)
chr4 (3-188)||(24851610-24851801)
chr4 (1-187)||(21034382-21034574)
chr4 (1-112)||(12593249-12593361)
chr4 (1-187)||(36168540-36168731)
chr4 (4-163)||(18965306-18965471)
chr4 (49-166)||(229416-229538)
chr4 (119-187)||(28465227-28465294)
chr4 (119-187)||(55677290-55677357)
chr4 (119-187)||(34789715-34789782)
chr4 (119-187)||(41608521-41608588)
chr4 (119-187)||(54440715-54440782)
chr4 (65-166)||(56077534-56077640)
chr4 (1-62)||(55677233-55677295)
chr4 (119-188)||(21034569-21034637)
chr4 (119-188)||(56077657-56077725)
chr4 (119-187)||(14439974-14440041)
chr4 (119-187)||(33777955-33778022)
chr4 (119-187)||(34807263-34807330)
chr4 (96-184)||(229310-229403)
chr4 (119-164)||(2118628-2118672)
chr4 (119-164)||(17504142-17504186)
chr4 (138-187)||(33689974-33690023)
chr4 (119-164)||(35193476-35193520)
chr4 (119-187)||(4219703-4219770)
chr4 (119-187)||(6617005-6617072)
chr4 (123-187)||(16214832-16214895)
chr4 (119-187)||(28166150-28166217)
[»] chr3 (46 HSPs)
chr3 (1-187)||(14654337-14654529)
chr3 (1-187)||(44676680-44676872)
chr3 (1-187)||(329982-330174)
chr3 (1-187)||(46013630-46013822)
chr3 (1-187)||(51473063-51473255)
chr3 (1-187)||(51828748-51828940)
chr3 (1-187)||(32730597-32730789)
chr3 (1-187)||(41998376-41998568)
chr3 (1-187)||(49720579-49720771)
chr3 (1-181)||(39010282-39010467)
chr3 (1-187)||(51828165-51828357)
chr3 (1-112)||(16689517-16689629)
chr3 (1-151)||(55389787-55389935)
chr3 (1-187)||(40838860-40839052)
chr3 (1-187)||(52375473-52375669)
chr3 (5-187)||(40275241-40275428)
chr3 (1-187)||(49951692-49951884)
chr3 (1-187)||(50662620-50662812)
chr3 (1-157)||(38535471-38535633)
chr3 (1-188)||(43222535-43222727)
chr3 (47-187)||(47431843-47431988)
chr3 (1-187)||(52237024-52237217)
chr3 (1-187)||(43678441-43678622)
chr3 (47-187)||(30513868-30514009)
chr3 (1-84)||(34104902-34104986)
chr3 (1-187)||(34104845-34105048)
chr3 (119-187)||(52236962-52237029)
chr3 (119-187)||(32730535-32730602)
chr3 (119-187)||(49720517-49720584)
chr3 (119-187)||(51828103-51828170)
chr3 (122-188)||(25535036-25535101)
chr3 (122-188)||(40275430-40275495)
chr3 (119-188)||(34104782-34104850)
chr3 (119-188)||(51828685-51828753)
chr3 (119-187)||(330169-330236)
chr3 (119-187)||(43678617-43678684)
chr3 (119-187)||(55389930-55389997)
chr3 (137-187)||(49951896-49951946)
chr3 (119-164)||(22425145-22425189)
chr3 (82-115)||(30514021-30514054)
chr3 (119-187)||(14654524-14654591)
chr3 (1-68)||(26274837-26274904)
chr3 (119-187)||(26837688-26837755)
chr3 (119-187)||(40838798-40838865)
chr3 (119-187)||(51473001-51473068)
chr3 (119-187)||(52375664-52375731)
[»] chr8 (29 HSPs)
chr8 (1-187)||(35426959-35427150)
chr8 (1-187)||(9796934-9797126)
chr8 (1-187)||(28254572-28254764)
chr8 (1-187)||(18049737-18049929)
chr8 (1-187)||(34799226-34799421)
chr8 (1-187)||(35694078-35694270)
chr8 (1-187)||(41260407-41260599)
chr8 (1-187)||(5730963-5731150)
chr8 (4-188)||(42035917-42036106)
chr8 (1-158)||(15256041-15256204)
chr8 (47-188)||(18428016-18428162)
chr8 (1-187)||(7910763-7910954)
chr8 (47-180)||(2208868-2209006)
chr8 (11-98)||(6115351-6115438)
chr8 (1-102)||(26254634-26254736)
chr8 (119-187)||(7910949-7911016)
chr8 (53-105)||(16578341-16578393)
chr8 (1-57)||(599740-599797)
chr8 (119-187)||(35427145-35427212)
chr8 (137-188)||(42036121-42036172)
chr8 (119-187)||(5731145-5731212)
chr8 (119-187)||(16578429-16578496)
chr8 (119-187)||(18049924-18049991)
chr8 (119-187)||(35694016-35694083)
chr8 (119-187)||(41260594-41260661)
chr8 (120-187)||(9796872-9796938)
chr8 (119-187)||(28254759-28254826)
chr8 (139-187)||(35163844-35163892)
chr8 (119-187)||(41681279-41681346)
[»] chr7 (33 HSPs)
chr7 (1-187)||(26026526-26026718)
chr7 (1-187)||(48247799-48247991)
chr7 (1-187)||(26048094-26048285)
chr7 (4-187)||(25637409-25637598)
chr7 (1-187)||(16081445-16081637)
chr7 (1-187)||(35160947-35161139)
chr7 (1-166)||(7732696-7732866)
chr7 (1-187)||(5745785-5745977)
chr7 (1-180)||(27245412-27245597)
chr7 (2-184)||(786932-787119)
chr7 (3-181)||(5334080-5334264)
chr7 (4-187)||(14311498-14311687)
chr7 (1-112)||(34594790-34594902)
chr7 (47-187)||(34595024-34595172)
chr7 (11-82)||(28687756-28687828)
chr7 (76-187)||(11971484-11971600)
chr7 (1-80)||(11973660-11973740)
chr7 (1-86)||(39387287-39387373)
chr7 (119-187)||(5745972-5746039)
chr7 (119-187)||(28687832-28687899)
chr7 (55-187)||(2757961-2758098)
chr7 (123-188)||(9181746-9181810)
chr7 (119-187)||(7732634-7732701)
chr7 (119-187)||(11973735-11973802)
chr7 (119-187)||(15712511-15712578)
chr7 (119-187)||(27245350-27245417)
chr7 (119-187)||(33880918-33880985)
chr7 (119-187)||(48247737-48247804)
chr7 (137-187)||(25637344-25637394)
chr7 (119-188)||(16081632-16081700)
chr7 (119-187)||(5334016-5334083)
chr7 (119-187)||(26026464-26026531)
chr7 (119-187)||(26048280-26048347)
[»] chr6 (15 HSPs)
chr6 (1-187)||(29891288-29891480)
chr6 (1-187)||(5114614-5114806)
chr6 (1-187)||(30250899-30251091)
chr6 (1-183)||(31073290-31073480)
chr6 (8-187)||(25472227-25472412)
chr6 (26-187)||(28636431-28636596)
chr6 (1-187)||(31573871-31574063)
chr6 (88-187)||(24640481-24640585)
chr6 (119-187)||(29891226-29891293)
chr6 (119-187)||(25468997-25469064)
chr6 (119-187)||(31073475-31073542)
chr6 (119-187)||(31574058-31574125)
chr6 (119-187)||(18505251-18505318)
chr6 (119-164)||(28472805-28472849)
chr6 (119-187)||(30250837-30250904)
[»] chr5 (24 HSPs)
chr5 (1-187)||(18149869-18150061)
chr5 (27-187)||(8418856-8419021)
chr5 (26-187)||(19291503-19291668)
chr5 (1-187)||(38900850-38901042)
chr5 (4-187)||(15029525-15029709)
chr5 (1-119)||(21370915-21371034)
chr5 (1-187)||(5161729-5161916)
chr5 (4-188)||(22651490-22651680)
chr5 (3-72)||(14340674-14340744)
chr5 (1-104)||(15115329-15115433)
chr5 (64-187)||(4967041-4967169)
chr5 (1-54)||(28289892-28289946)
chr5 (69-187)||(14340526-14340648)
chr5 (119-187)||(5161911-5161978)
chr5 (119-187)||(21371029-21371096)
chr5 (119-187)||(28289830-28289897)
chr5 (119-187)||(28289977-28290044)
chr5 (95-187)||(22651648-22651745)
chr5 (2-65)||(20265884-20265946)
chr5 (119-187)||(15115428-15115495)
chr5 (119-187)||(24325543-24325610)
chr5 (119-187)||(24331892-24331959)
chr5 (119-187)||(24362168-24362235)
chr5 (119-187)||(39083506-39083573)
[»] chr1 (40 HSPs)
chr1 (1-187)||(9992301-9992493)
chr1 (1-187)||(30786980-30787172)
chr1 (1-187)||(44954372-44954564)
chr1 (5-187)||(34555593-34555780)
chr1 (1-187)||(10278757-10278950)
chr1 (1-187)||(44582265-44582457)
chr1 (4-187)||(50304993-50305182)
chr1 (1-187)||(16298890-16299082)
chr1 (1-119)||(1744535-1744654)
chr1 (1-119)||(4080229-4080349)
chr1 (1-187)||(17641511-17641702)
chr1 (1-163)||(37505238-37505406)
chr1 (36-187)||(21938709-21938865)
chr1 (1-187)||(29439139-29439331)
chr1 (1-187)||(8229786-8229979)
chr1 (1-105)||(1837714-1837818)
chr1 (1-102)||(443787-443889)
chr1 (47-187)||(29021111-29021264)
chr1 (1-84)||(50926496-50926579)
chr1 (119-187)||(37421308-37421375)
chr1 (60-103)||(34011559-34011602)
chr1 (119-188)||(37505401-37505469)
chr1 (119-187)||(1744473-1744540)
chr1 (119-187)||(9992488-9992555)
chr1 (5-62)||(23340395-23340453)
chr1 (119-187)||(16298828-16298895)
chr1 (139-187)||(44954578-44954626)
chr1 (119-188)||(4080166-4080234)
chr1 (119-164)||(9019142-9019186)
chr1 (119-164)||(17088472-17088516)
chr1 (119-164)||(21856375-21856419)
chr1 (119-188)||(29439076-29439144)
chr1 (123-188)||(50304927-50304991)
chr1 (1-65)||(50926440-50926504)
chr1 (119-187)||(1837651-1837719)
chr1 (119-187)||(17433362-17433429)
chr1 (119-187)||(30786918-30786985)
chr1 (119-187)||(39154165-39154232)
chr1 (119-187)||(44582203-44582270)
chr1 (119-187)||(52335843-52335910)
[»] scaffold0097 (2 HSPs)
scaffold0097 (1-187)||(46475-46667)
scaffold0097 (119-188)||(46412-46480)
[»] scaffold0712 (1 HSPs)
scaffold0712 (1-187)||(6538-6729)
[»] scaffold0709 (1 HSPs)
scaffold0709 (1-187)||(6556-6747)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-85)||(84408-84493)
[»] scaffold0295 (1 HSPs)
scaffold0295 (119-164)||(4962-5006)


Alignment Details
Target: chr2 (Bit Score: 130; Significance: 1e-67; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 44219981 - 44219790
Alignment:
Q  1 tgggtacaaggaatctacttgttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagt 100  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  44219981 tgggtaaaaggaatctacttgttcagcacacaaaccaagaaaaactctaatttctaagacatgtttcaggtatgtaatatgtctcgaaaattagcttagt 44219882  T
Q  101 gtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||||| |||||      ||||||||||||||||| |||||||||||||||||||||| |||||||||| || ||||||||||||||    
T  44219881 gtgctgaataaagtagattccttgtacccacatgttttatt-ccttgtttacttcatggttgagcataggtgattggactaaaactgtcattt 44219790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 20128075 - 20127882
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20128075 tgggtacaaggaatctactttgttcagcacacaaaccaagaaaaactataatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggttag 20127976  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcatttt 188  Q
    ||||||||||||| |||||      ||||||||||||||||| | ||||||| |||||||||||||||||||| || || ||||| |||||||||    
T  20127975 tgtgctgaataaagtagattccttctacccacatgttttatt-ctttgtttatttcatggttgagtataggtggttggactaaaattgtcatttt 20127882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 13399628 - 13399820
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    ||||||| |||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13399628 tgggtacgaggaatctactttgttcagcacacaaaccaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggttag 13399727  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      || |||||||||||||| | ||||||| |||||||||||| ||||||| || |||||||||||||||||    
T  13399728 tgtgctgaataaagtagattccttgtatccacatgttttatt-ctttgtttatttcatggttgagcataggtggttggattaaaactgtcattt 13399820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 11539976 - 11539784
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  11539976 tgggtacaaggaatctactttgttcagcacacaaaccaagaaaaaccctaatttctaagtcatgtttcaggtatgtaacatgtctcggaaattaggttag 11539877  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||| ||||||||| |||||      ||||||||||||||||| | ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  11539876 tgtactgaataaagtagattccttgtacccacatgttttatt-cattgtttatttcatggttgagcataggtggttggactaaaactgtcattt 11539784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 43160218 - 43160410
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  43160218 tgggtacaaggaatctactttgttcagcacacaaaccaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatgtctcagaaattaggttag 43160317  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      |||||||||| |||||| ||||||||| |||||||||||  |||| || || |||||||||||||||||    
T  43160318 tgtgctgaataaagtagattcattgtacccacatgatttatt-ccttgtttatttcatggttgatcatagatggttggattaaaactgtcattt 43160410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 6949790 - 6949598
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||||||||| | |||||| ||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  6949790 tgggtacaaggaatctactttgttcagcacacacaccaagaacaaccctaatttctaagacatgtttcaggtatgtaacatgtctcagaaattaggttag 6949691  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||||||||||||||||| | ||||||| ||||||||||| |||||||| || || ||||||||||||||    
T  6949690 tgtgctgaataaagtagattctttgtacccacatgttttatt-ctttgtttatttcatggttgaatataggtggttggactaaaactgtcattt 6949598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 4809087 - 4809280
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||| ||| ||||| |||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||  |||||||||||    
T  4809087 tgggtacaaggaatctgctttgttcaacacacaaaccaagaaaaaccctaatttttaagacatgtttcaggtatgtaacatgtctcgggaattaggttag 4809186  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcatttt 188  Q
    ||||||||||||| |||||      ||||||||||||||||| | ||||||| |||||||||||| ||||||| || || |||||||||||||||    
T  4809187 tgtgctgaataaagtagattccttgtacccacatgttttatt-ctttgtttatttcatggttgagcataggtggttggactaaaactgtcatttt 4809280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 15550882 - 15551067
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||| ||||||| ||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15550882 tgggtacaaggagtctactttgttcagcacacgaaccaagaaaaacactaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 15550981  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaact 180  Q
    ||||||||||||| |||||      ||||||||||||||||| | ||||||| |||||||||||| ||| ||| || || |||||||    
T  15550982 tgtgctgaataaagtagattccttgtacccacatgttttatt-ctttgtttatttcatggttgagcatatgtggttggactaaaact 15551067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 33920820 - 33921011
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||| ||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  33920820 tgggtacaaggaatctactttgttcagtacacaaaccaagaaaaaccctaatttctaagacatgtttcaggtatataacatgtctcggaaattaggttag 33920919  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||||||||||||||||| | ||||||| |||| ||||||| ||||||| || || ||||||||||||||    
T  33920920 tgtgctgaataaagtagattccttgtacccacatgttttatt-ctttgtttatttca-ggttgagcataggtggttggactaaaactgtcattt 33921011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 43216047 - 43215855
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||| |||||    
T  43216047 tgggtacaaggaatctactttgttcagcacacaaaccaagaaaaaccctaatttctaagacatgtttcaggtatttaacatgtctcggaaattaagttag 43215948  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||||| ||||||||||| | ||||||| |||||||||||  ||||||| || || ||||||||||||||    
T  43215947 tgtgctgaataaagtagattctttgtacccgcatgttttatt-ctttgtttatttcatggttgaacataggtggttggactaaaactgtcattt 43215855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 38008159 - 38008351
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    ||||||||| |||| ||||| ||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  38008159 tgggtacaaagaatgtactttgttcagcacactaaccaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatgtctcagaaattaggttag 38008258  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||||||||||||||||| | ||||||| |||||||||||| ||||||| || || ||||||| ||||||    
T  38008259 tgtgctgaataaagtagattccttgtacccacatgttttatt-ctttgtttatttcatggttgagcataggtggttggactaaaactatcattt 38008351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 63296 - 63103
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttc-aggtatgtaacatgtctcga-aaattaggtt 97  Q
    |||||||||||||||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||| |||||||||| ||||||| | ||||||||||    
T  63296 tgggtacaaggaatctactttgttcatcacacaaa-caagaaaaaccctaatttctaagacatgtttcaaggtatgtaatatgtctcaagaaattaggtt 63198  T
Q  98 agtgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||||| |||||      ||||||||||||||||| ||||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  63197 agtgtgctgaataaagtagatttcttgtacccacatgttttatt-ccttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 63103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 4355963 - 4356156
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactc-taatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggtta 98  Q
    ||||||||||||||||| || ||| |||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4355963 tgggtacaaggaatctaatttgtttagcacacaaaccaagaaaaacccctaatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggtta 4356062  T
Q  99 gtgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||| ||||||||| |||||      ||||||||||||||||| | ||||||| |||||| ||||| ||||||| || || ||||||||||||||    
T  4356063 gtgttctgaataaagtagattccttgtacccacatgttttatt-ctttgtttatttcatgcttgagcataggtggttggactaaaactgtcattt 4356156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 181
Target Start/End: Original strand, 32418368 - 32418551
Alignment:
Q  4 gtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtgt 102  Q
    ||||||||||||||||| ||||||||||||||  ||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  32418368 gtacaaggaatctactttgttcagcacacaaactaagaaaaaccctaatttctaagatatgtttcaggtatgtaacatgtctcggaaattaggttagtgt 32418467  T
Q  103 gctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactg 181  Q
    | |||||||| |||||      |||||| |||||||||| | ||||||| |||||||||||  ||||||| || || ||||||||    
T  32418468 gttgaataaagtagattccttatacccatatgttttatt-ctttgtttatttcatggttgaacataggtggttggactaaaactg 32418551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 16953272 - 16953083
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||| ||||||||||||| |||||||||||    |||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  16953272 tgggtataaggaatctactttgttcagcacac----caagaaaaaccctaatttctaagacatgtttcagatatgtaacatgtctcggaaattaggttag 16953177  T
Q  100 tgtgctgaataaaatagatta-------cccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||||       |||| ||||||||||   ||||||| |||||||||||| ||||||  || || ||||||||||||||    
T  16953176 tgtgctgaataaagtagattacttgtaccccaaatgttttatt-ttttgtttatttcatggttgagcataggtagttggactaaaactgtcattt 16953083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 28 - 187
Target Start/End: Complemental strand, 13315807 - 13315643
Alignment:
Q  28 acacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtgtgctgaataaaatagat------tac 121  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||| |||||      |||    
T  13315807 acacaaaccaagaaaaaccataatttctaagacatgtttcaggtatgtaacatgcatcggaaattaggttagtgtgctgaataaagtagattccttgtac 13315708  T
Q  122 ccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||| ||||||||| | ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  13315707 ccacgtgttttatt-ctttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 13315643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 42192580 - 42192386
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaa--ctctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggtt 97  Q
    |||||||||||||||||||| |||||||||||||  ||| |||||  | ||||||||||||||||||||||||||||||| |||||||  ||||||||||    
T  42192580 tgggtacaaggaatctactttgttcagcacacaacacaaaaaaaaaaccctaatttctaagacatgtttcaggtatgtaatatgtctcagaaattaggtt 42192481  T
Q  98 agtgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||| |||||||| |||||      |||||||||| |||||| ||||||||| |||||| ||||| ||| ||| || || ||||||||||||||    
T  42192480 agtgtgttgaataaagtagattccttgtacccacatgctttatt-ccttgtttatttcatgattgagcatatgtggttggactaaaactgtcattt 42192386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 22445847 - 22445964
Alignment:
Q  4 gtacaaggaatctacttgtt--cagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtg 101  Q
    ||||||| ||||||||| ||  ||||||| ||| ||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  22445847 gtacaagaaatctactttttttcagcacataaaccaagaaaaaccataatttctaagacatgtttcaggtatgtaacatgtctcggaaattagattagtg 22445946  T
Q  102 tgctgaataaaatagatt 119  Q
    ||||||||||| ||||||    
T  22445947 tgctgaataaagtagatt 22445964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 25335926 - 25335826
Alignment:
Q  19 ttgttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtgtgctgaataaaatagat 118  Q
    |||||||||||||||| ||| |||||| ||||||||||| |||||||||| ||||||||||| ||||  ||||||| ||||||||| ||||||| |||||    
T  25335926 ttgttcagcacacaaaccaataaaaaccctaatttctaaaacatgtttcacgtatgtaacatatctcagaaattagattagtgtgccgaataaagtagat 25335827  T
Q  119 t 119  Q
    |    
T  25335826 t 25335826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 5560886 - 5560818
Alignment:
Q  3 ggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcagg 70  Q
    |||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  5560886 ggtacaaggaatctactttgttcagcacacaaaccaagaaaaaccctaatttctaagacatgtttcagg 5560818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 649734 - 649803
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcagg 70  Q
    |||||||||||||||||||| ||||| |||||||| |||||||| | |||||||||||||||| |||||||    
T  649734 tgggtacaaggaatctactttgttcaacacacaaaccaagaaaacc-ctaatttctaagacatatttcagg 649803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 188
Target Start/End: Original strand, 20128070 - 20128138
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcatttt 188  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||||| || || |||||||||||||||    
T  20128070 tacccacatgatttattcc-ttgtttatttcatggttgagcataggtggttggactaaaactgtcatttt 20128138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 4809092 - 4809025
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  4809092 tacccacatgatttattcc-ttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 4809025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 6949785 - 6949852
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  6949785 tacccacatgatttattcc-ttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 6949852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 16175682 - 16175749
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  16175682 tacccacatgatttattcc-ttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 16175749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 38008164 - 38008097
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||| | || |||||||||||||||||    
T  38008164 tacccacatgatttattcc-ttgtttatttcatggttgagcataggcggttggattaaaactgtcattt 38008097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 43160223 - 43160156
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||  ||||||| ||||| ||||||||||||||    
T  43160223 tacccacatgatttattcc-ttgtttatttcatggttgaacataggtggttagactaaaactgtcattt 43160156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 63291 - 63358
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||| | ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  63291 tacccacatgatttatttc-ttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 63358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 4355968 - 4355901
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||  ||||||| || || ||||||||||||||    
T  4355968 tacccacatgatttattcc-ttgtttatttcatggttgaacataggtggttggactaaaactgtcattt 4355901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 5560230 - 5560175
Alignment:
Q  63 gtttcaggtatgtaacatgtctcgaaaattaggttagtgtgctgaataaaatagatt 119  Q
    |||||| ||||||||||||||| | || |||||||||||||||||||||| ||||||    
T  5560230 gtttcatgtatgtaacatgtcttggaa-ttaggttagtgtgctgaataaagtagatt 5560175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 5560883 - 5560950
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||| ||||| |||||||| ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  5560883 tacctacatgatttattcc-ttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 5560950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 9330127 - 9330194
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||| | ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  9330127 tacccacatgatttatttc-ttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 9330194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 11539971 - 11540038
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| ||||| |||||| ||||||| || || ||||||||||||||    
T  11539971 tacccacatgatttattcc-ttgtttatttcattgttgagcataggtggttggactaaaactgtcattt 11540038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 16953267 - 16953334
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| |||| || || || ||||||||||||||    
T  16953267 tacccacatgatttattcc-ttgtttatttcatggttgagcatagttggttggactaaaactgtcattt 16953334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 42192575 - 42192642
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| | |||||| ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  42192575 tacccacatgctctattcc-ttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 42192642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 22445848 - 22445786
Alignment:
Q  124 acatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||| |||||||| ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  22445848 acatgatttattcc-ttgtttatttcatggttgagcataggtggtttgactaaaactgtcattt 22445786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 239565 - 239498
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||| |||  |  ||||||||||||||    
T  239565 tacccacatgctttattcc-ttgtttatttcatggttgagcataggggataggtctaaaactgtcattt 239498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 16175629 - 16175593
Alignment:
Q  76 aacatgtctcgaaaattaggttagtgtgctgaataaa 112  Q
    |||||||||| |||||||| |||||||||||||||||    
T  16175629 aacatgtctcaaaaattagattagtgtgctgaataaa 16175593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 24140004 - 24140043
Alignment:
Q  126 atgttttattcccttgtttacttcatggttgagtataggtg 166  Q
    |||||||||||| |||||||||||||||||||| |||||||    
T  24140004 atgttttattcc-ttgtttacttcatggttgagcataggtg 24140043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 33920825 - 33920758
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||| || |||||||| ||||||| |||||||||||| |||||||  | || ||||||||||||||    
T  33920825 tacccacgtgatttattcc-ttgtttatttcatggttgagcataggtggctggactaaaactgtcattt 33920758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 43216042 - 43216109
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||| | ||||||| |||||||||||| ||||||| || || ||||| ||||||||    
T  43216042 tacccacatgatttatttc-ttgtttatttcatggttgagcataggtggttggactaaaattgtcattt 43216109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 5e-61; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 14440036 - 14440228
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14440036 tgggtacaaggaatctactttgttcagcacacaaatcaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggttag 14440135  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||||||||||||||||| | ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  14440136 tgtgctgaataaagtagattccttgtacccacatgttttatt-ctttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 14440228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 34789720 - 34789528
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34789720 tgggtacaaggaatctactttgttcagcacacaaaccaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggttag 34789621  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||||||||||||||||| | ||||||| |||||||||||| ||||||| || || ||||| ||||||||    
T  34789620 tgtgctgaataaagtagatttcttgtacccacatgttttatt-ctttgtttatttcatggttgagcataggtggttggactaaaattgtcattt 34789528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 54440777 - 54440968
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  54440777 tgggtacaaggaatctactttgttcagcacacaaatcaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggttag 54440876  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcatt 186  Q
    |||| |||||||| |||||      ||||||||||||||||| | ||||||| ||||| |||||| ||||||| || || |||||||||||||    
T  54440877 tgtgttgaataaagtagattccttgtacccacatgttttatt-ctttgtttatttcatagttgagcataggtggttggactaaaactgtcatt 54440968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 35643905 - 35643713
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||||||||||| |||||||||    |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  35643905 tgggtacaaggaatctactttgttcagcacacaaaccaagaaaaaaaaaaatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggttag 35643806  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||||||||||||||||| | ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  35643805 tgtgctgaataaagtagattccttgtacccacatgttttatt-ctttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 35643713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 46736863 - 46737055
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  46736863 tgggtacaaggaatctactttgttcagcacacaaaccaagaaaaaccctaatttctaagacatgtttcacgtatgtaacatgtctcggaaattaggttag 46736962  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||| |||||| |||||      ||||||||||||||||| | ||||||| ||||||||| || ||||||| || || ||||||||||||||    
T  46736963 tgtgctaaataaagtagattccttgtacccacatgttttatt-ctttgtttatttcatggtttagcataggtggttggactaaaactgtcattt 46737055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 28465289 - 28465475
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  28465289 tgggtacaaggaatctactttgttcagcacataaaccaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggttag 28465388  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactg 181  Q
    ||||||||||||| |||||      || |||||||||||||| | ||||||| |||||||||||| ||||||| || || ||||||||    
T  28465389 tgtgctgaataaagtagattccttgtatccacatgttttatt-ctttgtttatttcatggttgagcataggtggttggactaaaactg 28465475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 3 - 187
Target Start/End: Original strand, 45838757 - 45838947
Alignment:
Q  3 ggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtg 101  Q
    ||||||| |||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  45838757 ggtacaaagaatctactttgttcagcacacaaaccaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggttagta 45838856  T
Q  102 tgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||| |||||      ||||||||||||||||| | ||||||| ||||||| |||| ||| ||| || || ||||||||||||||    
T  45838857 tgctgaataaagtagattctttgtacccacatgttttatt-ctttgtttatttcatggctgagcatatgtggttggactaaaactgtcattt 45838947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 26974622 - 26974430
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||| ||||||||| |||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26974622 tgggtacaagaaatctactttgttcagcacacaaaccaagaaaaatcctaatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggttag 26974523  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||||||||||||||||| | ||||||| || ||||||||| |||| || ||  | ||||||||||||||    
T  26974522 tgtgctgaataaagtagatttcttgtacccacatgttttatt-ctttgtttattttatggttgagcatagttggttgaactaaaactgtcattt 26974430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 33777960 - 33777768
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| ||| |||||||||| ||||||||||  ||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  33777960 tgggtacaaggaatctactttgtttagcacacaaaccaagaaaaaccttaatttctaagacatgtttcaggtatgtaacctgtctcggaaattaggttag 33777861  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| || ||      ||||||||||||||||| ||||||||| |||||||||||  ||||||| || || ||||||| ||||||    
T  33777860 tgtgctgaataaagtaaattccttgtacccacatgttttatt-ccttgtttatttcatggttgaacataggtggttggactaaaactctcattt 33777768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 6617010 - 6616819
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||| ||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6617010 tgggtacaagaaatctactttgttcagcacacaaaccaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggttag 6616911  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| || |||||      |||||| |||||||||| | || |||| |||||||| ||| ||||||| || || ||||||||||||||    
T  6616910 tgtgctgaat-aagtagattctttgtacccaaatgttttatt-ctttctttatttcatggtagagcataggtggttggactaaaactgtcattt 6616819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 34807347 - 34807539
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||   |||| | ||||    
T  34807347 tgggtataaggaatctactttgttcagcacacaaaccaagaaaaaccctaatttttaagacatgtttcaggtatgtaacatgtctctttaatttgtttag 34807446  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||||||||||||||||| | ||||||| |||||||||||| ||| ||| || || ||||||||||||||    
T  34807447 tgtgctgaataaagtagattccttgtacccacatgttttatt-ctttgtttatttcatggttgagcatatgtggttggactaaaactgtcattt 34807539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 3 - 188
Target Start/End: Complemental strand, 24851801 - 24851610
Alignment:
Q  3 ggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtg 101  Q
    |||||||||||||||||| |||||||||||||| |||||||| | ||||||| |||||||||||||||||||||||||||||||| |||||||||| |||    
T  24851801 ggtacaaggaatctactttgttcagcacacaaaccaagaaaacccctaatttataagacatgtttcaggtatgtaacatgtctcggaaattaggtttgtg 24851702  T
Q  102 tgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcatttt 188  Q
    |||||||| || |||||      |||||| |||||||||| | ||||||| ||||||| |||  ||||||| || || |||||||||||||||    
T  24851701 tgctgaattaagtagattccttgtacccatatgttttatt-ctttgtttatttcatggctgaacataggtggttggactaaaactgtcatttt 24851610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 21034574 - 21034382
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||| ||||||||| |||||||||| |||||||||||||||| |||||| |||||||||||||||| ||||||||||||    
T  21034574 tgggtacaaggaatctactttgttcggcacacaaaccaagaaaaaccctaatttctaagacatatttcagatatgtaacatgtctcggaaattaggttag 21034475  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||| |||||| |||||      ||||||||| ||||||| | ||||||| || ||||||||   |||||| || || ||||||||||||||    
T  21034474 tgtgctaaataaagtagatttcttgtacccacatattttatt-ctttgtttatttgatggttgaacgtaggtggttggactaaaactgtcattt 21034382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 12593361 - 12593249
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  12593361 tgggtacaaggaatctactttgttcaacacacaaaccaagaaaaaccctaatttctaagacatgtttgaggtatgtaacatgtctcggaaattaggttag 12593262  T
Q  100 tgtgctgaataaa 112  Q
    |||| ||||||||    
T  12593261 tgtgttgaataaa 12593249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 36168540 - 36168731
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||| ||||||||||||| |||||||||||||  |||||||||| ||||||||||| |||||||||| ||||||||||| ||||||||||||| ||||    
T  36168540 tgggtataaggaatctactttgttcagcacacaac-caagaaaaaccctaatttctaatacatgtttcaagtatgtaacatatctcgaaaattagattag 36168638  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||||||||| ||||||| | ||||||| || ||||||||| ||||||| || || ||||||||| ||||    
T  36168639 tgtgctgaataaagtagatttcttgtacccacatattttatt-ctttgtttattttatggttgagcataggtggttggactaaaactgtgattt 36168731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 163
Target Start/End: Complemental strand, 18965471 - 18965306
Alignment:
Q  4 gtacaaggaatctacttg-ttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtgt 102  Q
    |||||||||||||||||  |||||||||  ||  || |||||||| | ||||||||||||||||||||||||||||||||||    |||||||||| | |    
T  18965471 gtacaaggaatctactttattcagcacattaacaaaaaaaaactcaattttctaagacatgtttcaggtatgtaacatgtcttagtaattaggttaatct 18965372  T
Q  103 gctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtatag 163  Q
    ||||||||||||||||      |||||||||| |||||| |||| |||| |||||||||||| ||||    
T  18965371 gctgaataaaatagattccttgtacccacatgctttatt-ccttatttatttcatggttgagcatag 18965306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 166
Target Start/End: Original strand, 229416 - 229538
Alignment:
Q  49 aatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtgtgctgaataaaatagat------tacccacatgttttattcccttgt 142  Q
    |||||||||||||||||||| |||||||||||| ||    |||||||||||| ||||||||||| |||||      || ||||||| |||||| |||| |    
T  229416 aatttctaagacatgtttcatgtatgtaacatgacttagtaattaggttagtctgctgaataaagtagattccttgtatccacatgctttatt-ccttat 229514  T
Q  143 ttacttcatggttgagtataggtg 166  Q
    ||| |||||||||||| |||||||    
T  229515 ttatttcatggttgagcataggtg 229538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 28465294 - 28465227
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||||||||| ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  28465294 tacccacatgttttattcc-ttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 28465227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 55677290 - 55677357
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| |||||||||| || ||||||||||||||    
T  55677290 tacccacatgatttattcc-ttgtttatttcatggttgagcataggtgattggactaaaactgtcattt 55677357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 34789715 - 34789782
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||||||||  ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  34789715 tacccacatgttttattct-ttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 34789782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 41608588 - 41608521
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  41608588 tacccacatgatttattcc-ttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 41608521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 54440782 - 54440715
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  54440782 tacccacatgatttattcc-ttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 54440715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 166
Target Start/End: Complemental strand, 56077640 - 56077534
Alignment:
Q  65 ttcaggtatgtaacatgtctcgaaaattaggttagtgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgag 158  Q
    ||||||||||||| |||||| | |||||||||||| |||||||| ||| |||||      ||||| |||| |||||| ||||||||| ||||||||||||    
T  56077640 ttcaggtatgtaaaatgtcttggaaattaggttagcgtgctgaacaaagtagattccttgtacccccatgatttatt-ccttgtttatttcatggttgag 56077542  T
Q  159 tataggtg 166  Q
     |||||||    
T  56077541 cataggtg 56077534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 55677295 - 55677233
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacat 62  Q
    |||||||||  ||||||||| |||||||||||||| |||||||| | ||||||||||||||||    
T  55677295 tgggtacaaaaaatctactttgttcagcacacaaaccaagaaaagccctaatttctaagacat 55677233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 188
Target Start/End: Original strand, 21034569 - 21034637
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcatttt 188  Q
    |||||||||| |||||||| ||||| | |||||||||||| ||||||| || || |||||||||||||||    
T  21034569 tacccacatgatttattcc-ttgttcatttcatggttgagcataggtggttggactaaaactgtcatttt 21034637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 188
Target Start/End: Original strand, 56077657 - 56077725
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcatttt 188  Q
    ||||||||||||||||| | ||||||| |||||||||| | ||||||| || || |||||||||||||||    
T  56077657 tacccacatgttttatttc-ttgtttatttcatggttgggcataggtggttggactaaaactgtcatttt 56077725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 14440041 - 14439974
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||| ||| |||||||| ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  14440041 tacccatatgatttattcc-ttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 14439974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 33777955 - 33778022
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||| ||| || || ||||||||||||||    
T  33777955 tacccacatgatttattcc-ttgtttatttcatggttgagcatatgtggttggactaaaactgtcattt 33778022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 34807330 - 34807263
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| |||| || |||||||||||| ||||||| || || ||||||||||||||    
T  34807330 tacccacatgatttattcc-ttgtctatttcatggttgagcataggtggttggactaaaactgtcattt 34807263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 184
Target Start/End: Complemental strand, 229403 - 229310
Alignment:
Q  96 ttagtgtgctgaataaaatagatt------acccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtca 184  Q
    ||||||||||||||||| ||||||      || ||||||||||||||| || |||| |||||||||||| ||||||| || || |||||||||||    
T  229403 ttagtgtgctgaataaagtagattctttgtactcacatgttttattcc-ttatttatttcatggttgagcataggtggttggactaaaactgtca 229310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 2118628 - 2118672
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtatagg 164  Q
    ||||||||||||||||||| ||||||| |||||||||||| |||||    
T  2118628 tacccacatgttttattcc-ttgtttatttcatggttgagcatagg 2118672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 17504186 - 17504142
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtatagg 164  Q
    ||||||||||||||||||| ||||||| |||||||||||| |||||    
T  17504186 tacccacatgttttattcc-ttgtttatttcatggttgagcatagg 17504142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 33690023 - 33689974
Alignment:
Q  138 cttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||| |||||||||||||||||||| || || ||| ||||||||||    
T  33690023 cttgtttatttcatggttgagtataggtggttggactaacactgtcattt 33689974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 35193520 - 35193476
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtatagg 164  Q
    ||||||||||||||||||| ||||||| |||||||||||| |||||    
T  35193520 tacccacatgttttattcc-ttgtttatttcatggttgagcatagg 35193476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 4219770 - 4219703
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||  ||||||| |||||||||||| ||||| |||  | |||||||||||||||    
T  4219770 tacccacatgctttattca-ttgtttatttcatggttgagcataggggataggtttaaaactgtcattt 4219703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 6617005 - 6617072
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||  ||||| | || || ||||||||||||||    
T  6617005 tacccacatgatttattcc-ttgtttatttcatggttgaacataggcggttggactaaaactgtcattt 6617072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 16214832 - 16214895
Alignment:
Q  123 cacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||||  ||||||| |||||||||||| ||||||| || || ||||||| ||||||    
T  16214832 cacatgttttattct-ttgtttatttcatggttgagcataggtggttggactaaaactatcattt 16214895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 28166217 - 28166150
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||| |||||||||||  ||||||| |||||||||||| ||||||| ||  ||||||||| ||||||    
T  28166217 tacccatatgttttattct-ttgtttatttcatggttgagcataggtggttgaattaaaactatcattt 28166150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 3e-56; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 14654529 - 14654337
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  14654529 tgggtacaaggaatctactttgttcagcacacaaaccaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatgtcttggaaattaggttag 14654430  T
Q  100 tgtgctgaataaaatagatt------acccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| ||||||      |||||||||||||||| | ||||||| ||||||||||||||| |||| || || ||||||||||||||    
T  14654429 tgtgctgaataaagtagattccttgcacccacatgttttatt-ctttgtttatttcatggttgagtattggtggttggactaaaactgtcattt 14654337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 44676680 - 44676872
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    ||||||||| |||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  44676680 tgggtacaatgaatctactttgttcagcacacaaaccaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggttag 44676779  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||||||||||||||||| | ||||||| ||||| |||||| ||||||| ||||| ||||||||||||||    
T  44676780 tgtgctgaataaagtagattcctagtacccacatgttttatt-ctttgtttatttcatagttgagcataggtggttagactaaaactgtcattt 44676872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 330174 - 329982
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  330174 tgggtacaaggaatctactttgttcaacacacaaaccaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatatctcggaaattaggttag 330075  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||| ||||||||||||| |||||||||||||||||||||| ||| ||| || || ||||||||||||||    
T  330074 tgtgctgaataaagtagattccttgtacgcacatgttttatt-ccttgtttacttcatggttgagcataagtggttggactaaaactgtcattt 329982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 46013630 - 46013822
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    ||||||||| ||||||| || ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  46013630 tgggtacaatgaatctattttgttcagcacacaaatcaagaaaaaccctaatttttaagacatgtttcaggtatgtaacatgtctcggaaattaggttag 46013729  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||||||||||||||||| | ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  46013730 tgtgctgaataaagtagattctttgtacccacatgttttatt-ctttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 46013822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 51473063 - 51473255
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||||| ||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  51473063 tgggtacaaggaatctactttgttcagcatacaaaccaagaaaaaccctaatttttaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 51473162  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||| |||||||| |||||      ||||||||||||||||| | ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  51473163 tgtgttgaataaagtagattcattgtacccacatgttttatt-ctttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 51473255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 51828748 - 51828940
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||| ||||| |||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  51828748 tgggtacaaggaatatactttgttcagcacacaaaccaagaaaaaccctaatttctaagacatgttttaggtatgtaacatgtctcggaaattaggttag 51828847  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||||||||||||||||| | ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  51828848 tgtgctgaataaagtagattccttgtacccacatgttttatt-ctttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 51828940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 32730597 - 32730789
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  32730597 tgggtacaaggaatctactttgttcagcacacaaaccaagaaaaaccctaatttctaagacatgtttcaggtatataacatgtctcggaaattaggttag 32730696  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      |||||||||||||| ||   ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  32730697 tgtgctgaataaagtagattccttgtacccacatgtttt-ttgttttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 32730789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 41998568 - 41998376
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  41998568 tgggtacaaggaatctactttgttcagcacacaaaccaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatgtctcggaaattatgttag 41998469  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||| |||||||| |||||      |||||||||||||||||   ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  41998468 tgtgatgaataaagtagattctttgtacccacatgttttatt-atttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 41998376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 49720579 - 49720771
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||| ||||||| |||||||||| ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||    
T  49720579 tgggtacaaggaatctactttgttcagaacacaaaccaagaaaaaccctaatttttaagacatgtttcaggtacgtaacatgtctcggaaattaggttag 49720678  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||||||||||||||||| | ||||||| |||||||||||| ||||||| || ||  |||||||||||||    
T  49720679 tgtgctgaataaagtagattccttgtacccacatgttttatt-ctttgtttatttcatggttgagcataggtggttggaccaaaactgtcattt 49720771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 39010282 - 39010467
Alignment:
Q  1 tgggtacaaggaatctacttgttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagt 100  Q
    ||||||||||||||||| ||  | |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39010282 tgggtacaaggaatctaatttgttagcacacaaaccaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggttagt 39010381  T
Q  101 gtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactg 181  Q
    ||||||||||||||| ||      ||||||||||||||||| | ||||||| || ||||||||| ||||||| || || ||||||||    
T  39010382 gtgctgaataaaataaattccttgtacccacatgttttatt-ctttgtttattttatggttgagcataggtggttggactaaaactg 39010467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 51828165 - 51828357
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||  ||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  51828165 tgggtacaaggaatctactttgttacgcacacaaaccaagaaaaaccctaatttctaaaacatgtttcaggtatgtaacatgtctcggaaattaggttag 51828264  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||||||||| ||||||| |||||| || |||||||||||| ||||||  || || ||||||||||||||    
T  51828265 tgtgctgaataaagtagattccttgtacccacatcttttatt-ccttgtgtatttcatggttgagcataggtagttggactaaaactgtcattt 51828357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 16689517 - 16689629
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16689517 tgggtacaaggaatctactttgttcagcacacaaaccaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggttag 16689616  T
Q  100 tgtgctgaataaa 112  Q
    |||||||||||||    
T  16689617 tgtgctgaataaa 16689629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 55389935 - 55389787
Alignment:
Q  1 tgggtacaaggaatctacttgtt-cagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| || ||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||| ||||| ||||||||||||    
T  55389935 tgggtacaaggaatctacttttttcagcacacaaaccaagaaaaaccctaatttctaagacatatttcaggtatgtaacatatctcggaaattaggttag 55389836  T
Q  100 tgtgctgaataaaatagattacccacatgttttattcccttgtttacttcat 151  Q
    ||||||||||  | |||||||||||||||||||||| ||| |||||||||||    
T  55389835 tgtgctgaat--agtagattacccacatgttttatt-cctcgtttacttcat 55389787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 40838860 - 40839052
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||||| ||||  ||| ||||||  ||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  40838860 tgggtacaaggaatctactttgttcagcaaacaacccaaaaaaaaccttaatttctaagacatgtttcaggtatgtaacatgtctcagaaattaggttag 40838959  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||||||||||||||||| ||||||||| |||||||||||| ||| ||  || || ||||||||||||||    
T  40838960 tgtgctgaataaagtagattccttgtacccacatgttttatt-ccttgtttatttcatggttgagcatatgtagttggactaaaactgtcattt 40839052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 52375669 - 52375473
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatc----aagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattagg 95  Q
    |||||||||||||||||||| |||||||||||||  |    || |||||| |||||||||||||||||||||||||||||||||||||||  ||||||||    
T  52375669 tgggtacaaggaatctactttgttcagcacacaacccgaaaaaaaaaaaccctaatttctaagacatgtttcaggtatgtaacatgtctcagaaattagg 52375570  T
Q  96 ttagtgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||||||| |||||      |||||||||| |||||| ||||||||| |||||||||||| ||| ||| ||||| ||||||||||||||    
T  52375569 ttagtgtgctgaataaagtagattccttgtacccacatgctttatt-ccttgtttatttcatggttgagcatatgtggttagactaaaactgtcattt 52375473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 5 - 187
Target Start/End: Complemental strand, 40275428 - 40275241
Alignment:
Q  5 tacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtgtg 103  Q
    |||||||||||||||| ||||||||||||| | || ||||| ||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  40275428 tacaaggaatctactttgttcagcacacaactaaa-aaaaattctaatttctaagacatgtttcaggtatgtaacatgtctcagaaattagattagtgtg 40275330  T
Q  104 ctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||| |||||      |||||||||| |||||| ||||||||| |||||||||||| ||| ||| || || ||||||||||||||    
T  40275329 ctgaataaagtagatttcttatacccacatgctttatt-ccttgtttatttcatggttgagcatatgtggttggactaaaactgtcattt 40275241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 49951884 - 49951692
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    ||||||||| |||| ||||| ||||| |||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  49951884 tgggtacaatgaatttactttgttcaacacacaaaccaagaaaaaccctaatttctaagacatgtttcaagtatgtaacatgtctcggaaattaggttag 49951785  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||| |||||| |||||      ||||||||||||||||| | ||||||| |||||||||||| ||| ||| || || ||||||||| ||||    
T  49951784 tgtgctaaataaagtagattccttgtacccacatgttttatt-ctttgtttatttcatggttgagcatatgtggttggactaaaactgttattt 49951692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 50662620 - 50662812
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    ||||||||||||| |||||| ||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||| ||||    
T  50662620 tgggtacaaggaacctactttgtttagcacagaaatcaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatgtttcggaaattagattag 50662719  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
     || ||||||||| |||||      |||||||| |||||||| | ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  50662720 ggtactgaataaagtagattccttgtacccacacgttttatt-ctttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 50662812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 38535633 - 38535471
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||| ||| ||||| |||||||||||||  |||||||||  |||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  38535633 tgggtacaagaaatttactttgttcagcacacaagccaagaaaaatcctaatttctaagacatgtttcatgtatgtaacatgtctcggaaattaggttag 38535534  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttga 157  Q
    ||||||||||||| |||||      ||||||||||||||||| | ||||||| |||||||||||    
T  38535533 tgtgctgaataaagtagatttcttgtacccacatgttttatt-ctttgtttatttcatggttga 38535471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 43222727 - 43222535
Alignment:
Q  1 tgggtacaaggaatctacttg-ttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    ||||||||| ||||||||||  |||||||||| || ||| |||||  |||||||||||||||||||||| |||||||||||||||   ||||||||||||    
T  43222727 tgggtacaaagaatctactttattcagcacactaa-caaaaaaaaaactaatttctaagacatgtttcaagtatgtaacatgtcttagaaattaggttag 43222629  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcatttt 188  Q
    | ||||||||||| |||||      ||||||||||||||||| ||||||||| |||||||||||| ||||||| || || |||||||||||||||    
T  43222628 tatgctgaataaagtagatttcttgtacccacatgttttatt-ccttgtttatttcatggttgagcataggtggttggactaaaactgtcatttt 43222535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 47 - 187
Target Start/End: Complemental strand, 47431988 - 47431843
Alignment:
Q  47 ctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtgtgctgaataaaatagatt------acccacatgttttattccctt 140  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||      |||||||||||||||| | ||    
T  47431988 ctaatttctaaaacatgtttcaggtatgtaaaatgtctcggaaattaggttagtgtgctgaataaagtagattcattgcacccacatgttttatt-cttt 47431890  T
Q  141 gtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||| |||||||||||| ||||||| || || ||||||||||||||    
T  47431889 gtttatttcatggttgagcataggtggttggactaaaactgtcattt 47431843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 52237024 - 52237217
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactc-taatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggtta 98  Q
    |||||||||| |||||| || ||||||||||||| | || |||||  | | ||||||||||||||||||||||||||||||| ||||  |||||||||||    
T  52237024 tgggtacaagaaatctattttgttcagcacacaactaaaaaaaaaaaccttatttctaagacatgtttcaggtatgtaacatatctcagaaattaggtta 52237123  T
Q  99 gtgtgctgaataaaatagatt------acccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||| |||||||||| ||||||      ||||||||| |||||| ||||||||| |||||||||||  ||| ||| || || ||||||||||||||    
T  52237124 gtgcgctgaataaagtagattctttgcacccacatgctttatt-ccttgtttatttcatggttgaacatatgtggtttgactaaaactgtcattt 52237217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 43678622 - 43678441
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||| |||||||||||||           |||||||||| ||||| ||||||||||||    
T  43678622 tgggtataaggaatctactttgttcagcacacaaaccaagaaaaaccctaatttctaaga-----------tatgtaacatttctcggaaattaggttag 43678534  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||  |||||||| |||||      ||||||||||||||||| | ||||||| ||||| |||||| ||||||| || || ||||||||||||||    
T  43678533 tgtattgaataaagtagattccttgtacccacatgttttatt-ctttgtttatttcatagttgagcataggtggttggactaaaactgtcattt 43678441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 47 - 187
Target Start/End: Complemental strand, 30514009 - 30513868
Alignment:
Q  47 ctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtgtgctgaataaaatagat---tacccacatgttttattcccttgtt 143  Q
    |||||||||||||||||||| || ||| |||||||||| | |||||||| |||||||||||||||| |||||   ||| |||||||||||||   |||||    
T  30514009 ctaatttctaagacatgttttagatatataacatgtcttggaaattagggtagtgtgctgaataaagtagattcgtacgcacatgttttatt-atttgtt 30513911  T
Q  144 tacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    || ||| |||||||| |||||||  | || ||||||||||||||    
T  30513910 tatttc-tggttgagcataggtggctggactaaaactgtcattt 30513868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 34104986 - 34104902
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtct 84  Q
    |||||||||||||||||||| |||| |||||| || |||||||||| ||||||||| |||||||||||| |  ||||||||||||    
T  34104986 tgggtacaaggaatctactttgttcggcacactaaccaagaaaaaccctaatttcttagacatgtttcatgcttgtaacatgtct 34104902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 34104845 - 34105048
Alignment:
Q  1 tgggtacaaggaatctac-ttgttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaatta------ 93  Q
    |||||||||||||||||| |||||| |||||| || |||||||||| |||||||| |||||||||| || | ||| |||||||||   ||||||          
T  34104845 tgggtacaaggaatctactttgttcggcacactaaccaagaaaaaccctaatttcaaagacatgttacaagcatgaaacatgtctaagaaattagggttt 34104944  T
Q  94 -----ggttagtgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgt 182  Q
         ||||||||||| ||| ||| |||||      ||||||||||||||||| | ||||||| |||||||||||| ||||||| || || |||||||||    
T  34104945 ttcttggttagtgtgccgaacaaagtagattccttgtacccacatgttttatt-ctttgtttatttcatggttgagcataggtggttggactaaaactgt 34105043  T
Q  183 cattt 187  Q
    |||||    
T  34105044 cattt 34105048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 52237029 - 52236962
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| |||||||||| || ||||||||||||||    
T  52237029 tacccacatgctttattcc-ttgtttatttcatggttgagcataggtgattggactaaaactgtcattt 52236962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 32730602 - 32730535
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||||||||  | ||||||||||||||    
T  32730602 tacccacatgatttattcc-ttgtttatttcatggttgagcataggtgattgaactaaaactgtcattt 32730535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 49720584 - 49720517
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  49720584 tacccacatgatttattcc-ttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 49720517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 51828170 - 51828103
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  51828170 tacccacatgatttattcc-ttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 51828103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 25535101 - 25535036
Alignment:
Q  122 ccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcatttt 188  Q
    ||||||| |||||||| ||||||| |||||||||||| ||||||| || || |||||||||||||||    
T  25535101 ccacatgatttattcc-ttgtttatttcatggttgagcataggtggttggactaaaactgtcatttt 25535036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 122 - 188
Target Start/End: Original strand, 40275430 - 40275495
Alignment:
Q  122 ccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcatttt 188  Q
    ||||||| |||||||| ||||||| |||||||||||| ||||||| || || |||||||||||||||    
T  40275430 ccacatgctttattcc-ttgtttatttcatggttgagcataggtggttggactaaaactgtcatttt 40275495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 34104850 - 34104782
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcatttt 188  Q
    ||||||||||||||||||  ||||||| |||||||||||| ||||||| || || ||||| |||||||||    
T  34104850 tacccacatgttttattct-ttgtttatttcatggttgagcataggtggttggactaaaaatgtcatttt 34104782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 51828753 - 51828685
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcatttt 188  Q
    |||||||||| |||||||| ||||||| |||||||||||| |||| || || || |||||||||||||||    
T  51828753 tacccacatgatttattcc-ttgtttatttcatggttgagcatagatggttggactaaaactgtcatttt 51828685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 330169 - 330236
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||  ||||||| || ||||||||| ||||||| || |||||||||||||||||    
T  330169 tacccacatgatttattca-ttgtttattttatggttgagcataggtggttggattaaaactgtcattt 330236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 43678617 - 43678684
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| | |||||||||||||||||| ||  | ||||||||||||||    
T  43678617 tacccacatgatttattcc-ttgtttattccatggttgagtataggtggttgaactaaaactgtcattt 43678684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 55389930 - 55389997
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| || ||||||||| ||||||| || || ||||||||||||||    
T  55389930 tacccacatgatttattcc-ttgtttattttatggttgagcataggtggttggactaaaactgtcattt 55389997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 49951896 - 49951946
Alignment:
Q  137 ccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  49951896 ccttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 49951946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 22425145 - 22425189
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtatagg 164  Q
    ||||||||||||||||||| ||||||| |||||||||||| |||||    
T  22425145 tacccacatgttttattcc-ttgtttatttcatggttgagcatagg 22425189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 82 - 115
Target Start/End: Original strand, 30514021 - 30514054
Alignment:
Q  82 tctcgaaaattaggttagtgtgctgaataaaata 115  Q
    |||||||||||||||||||| |||||||||||||    
T  30514021 tctcgaaaattaggttagtgcgctgaataaaata 30514054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 14654524 - 14654591
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| |||| || ||  | ||||||||||||||    
T  14654524 tacccacatgatttattcc-ttgtttatttcatggttgagcatagatggttgaactaaaactgtcattt 14654591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 26274904 - 26274837
Alignment:
Q  1 tgggtacaaggaatctacttg-ttcagcacacaaatcaagaaaaactctaatttctaagacatgtttca 68  Q
    ||||||||| ||||| ||||  |||| |||||||| ||| |||||||||||||||||||| ||||||||    
T  26274904 tgggtacaaagaatccactttattcaacacacaaa-caaaaaaaactctaatttctaagatatgtttca 26274837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 26837688 - 26837755
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||| | | ||  ||||||||||||||    
T  26837688 tacccacatgctttattcc-ttgtttatttcatggttgagcatagggggtaagtctaaaactgtcattt 26837755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 40838865 - 40838798
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||  ||||||| |||||| |||| |||||||| || || ||||||||||||||    
T  40838865 tacccacatgctttattct-ttgtttatttcatgtttgattataggtggttggactaaaactgtcattt 40838798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 51473068 - 51473001
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||  |||||||| ||||||| |||||||||||  ||||||| || || ||||||||||||||    
T  51473068 tacccacattatttattcc-ttgtttatttcatggttgaacataggtggttggactaaaactgtcattt 51473001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 52375664 - 52375731
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| || |||| |||||||||||| ||| ||| || || ||||||||||||||    
T  52375664 tacccacatgctttattcc-ttatttatttcatggttgagcataagtggttggactaaaactgtcattt 52375731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 5e-55; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 35427150 - 35426959
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||| ||||| |||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  35427150 tgggtacaaggaatatactttgttcagcagacaaaccaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggttag 35427051  T
Q  100 tgtgctgaataaaatagat-----tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||     |||||||||||||||||  |||||||| |||||||||||| ||| ||| ||||| ||||||||||||||    
T  35427050 tgtgctgaataaagtagatccttatacccacatgttttatt-tcttgtttatttcatggttgagcatatgtggttagactaaaactgtcattt 35426959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 9796934 - 9797126
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    ||||| |||||||||||||| |||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||| ||||| ||||||||||||    
T  9796934 tgggtgcaaggaatctactttgttcagcacacaaaccaagaaaaaccctaatttctaaaacatgtttcaggtatgtaacatatctcggaaattaggttag 9797033  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||||||||||||||||| | ||||||| |||||||||||| ||||||| ||||| ||||||||||||||    
T  9797034 tgtgctgaataaagtagattccttgtacccacatgttttatt-ctttgtttatttcatggttgagcataggtggttagactaaaactgtcattt 9797126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 28254764 - 28254572
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  28254764 tgggtacaaggaatctacttcgttcagcacacaaaccaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggttag 28254665  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||| |||||| |||||      ||||||||||||||||| | ||||||| |||||||||||| ||||||| || || ||||| ||||||||    
T  28254664 tgtgcttaataaagtagattccttgtacccacatgttttatt-ctttgtttatttcatggttgagcataggtggttggactaaaaatgtcattt 28254572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 18049929 - 18049737
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||  ||||||||| ||||||||||  |||||||||| |||||||||||||||||||||||||||  ||||||||||||    
T  18049929 tgggtacaaggaatctactttgttacgcacacaaaccaagaaaaaccttaatttctaaaacatgtttcaggtatgtaacatgtctcagaaattaggttag 18049830  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||||||||||||||| | | ||||||| |||||||||||| ||||||| || |||||||||||||||||    
T  18049829 tgtgctgaataaagtagattccttgtacccacatgttttaat-ctttgtttatttcatggttgagcataggtggttggattaaaactgtcattt 18049737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 34799421 - 34799226
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacat---gtttcaggtatgtaacatgtctcgaaaattaggt 96  Q
    |||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||   |||||||||||||||||||||||| |||||||||    
T  34799421 tgggtacaaggaatctactttgttcagcacacaaaccaagaaaaattctaatttctaagacatattgtttcaggtatgtaacatgtctcggaaattaggt 34799322  T
Q  97 tagtgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||| |||||||| |||||      |||||||||| |||||| | ||||||| |||||||||||| ||||||| || || ||||| ||||||||    
T  34799321 tagtgtgttgaataaagtagattccttatacccacatgctttatt-ctttgtttatttcatggttgagcataggtggttggactaaaattgtcattt 34799226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 35694078 - 35694270
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||| |||||||||| |||||||||||||||||  ||||||||||||    
T  35694078 tgggtacaaggaatctactttgttcatcacacaaaccaagaaaaaccctaatttctatgacatgtttcgggtatgtaacatgtctcagaaattaggttag 35694177  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||| |||||||| |||||      ||||||||| ||||||| ||||||||| |||||||||||  ||||||| || || ||||||||||||||    
T  35694178 tgtgatgaataaagtagattccttgtacccacatattttatt-ccttgtttatttcatggttgaacataggtggttggactaaaactgtcattt 35694270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 41260599 - 41260407
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||| ||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||| ||    
T  41260599 tgggtacaagaaatctactttgttcagcacacaaaccaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatatctcggaaattaggtcag 41260500  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||| |||||||| |||||      ||||| ||||||||||| | ||||||| |||||||||||| ||||||| || || ||||| ||||||||    
T  41260499 tgtgttgaataaagtagatttcttgtacccgcatgttttatt-ctttgtttatttcatggttgagcataggtggttggactaaaagtgtcattt 41260407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 5731150 - 5730963
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||||||||||| |||||||||| |||| |||||||||||||||    |||||||||||||||| ||||||||||||    
T  5731150 tgggtacaaggaatctactttgttcagcacacaaaccaagaaaaaccctaaattctaagacatgttt----tatgtaacatgtctcggaaattaggttag 5731055  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||||||||||||||||| | ||||||| |||||||||||  |||||||||| || ||||||||||||||    
T  5731054 tgtgctgaataaagtagattccttgtacccacatgttttatt-ctttgtttatttcatggttgaacataggtgatt-gactaaaactgtcattt 5730963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 188
Target Start/End: Complemental strand, 42036106 - 42035917
Alignment:
Q  4 gtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtgt 102  Q
    ||||||| ||||||||| ||||||||||||| | || |||||| ||||||||||||||||||||||||||||||| |||||||  |||||||||||||||    
T  42036106 gtacaagaaatctactttgttcagcacacaactaaaaaaaaac-ctaatttctaagacatgtttcaggtatgtaatatgtctcagaaattaggttagtgt 42036008  T
Q  103 gctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcatttt 188  Q
    |||||||||| |||||      |||||||||| |||||| ||||||||| |||||||||||| ||| ||| || || |||||||||||||||    
T  42036007 gctgaataaagtagattccttgtacccacatgctttatt-ccttgtttatttcatggttgagcatatgtggttggactaaaactgtcatttt 42035917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 15256041 - 15256204
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    ||||||||| |||||||||| ||||| |||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  15256041 tgggtacaaagaatctactttgttcaacacacaaaccaagaaaaatcctaatttctaagacatgtttcaggtatgtaacatgtctaaaaaattaggttag 15256140  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgag 158  Q
    | ||||||||||| |||||      ||||||||||||||||| | ||||||| ||||||||||||    
T  15256141 tatgctgaataaagtagattccttgtacccacatgttttatt-ctttgtttatttcatggttgag 15256204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 47 - 188
Target Start/End: Original strand, 18428016 - 18428162
Alignment:
Q  47 ctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtgtgctgaataaaatagat------tacccacatgttttattccctt 140  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||      ||||||||||||||||| | ||    
T  18428016 ctaatttctaagacatgtttcaggtatgtaacatgtctcaagaattaggttagtgtgctgaataaaatagattccttatacccacatgttttatt-cttt 18428114  T
Q  141 gtttacttcatggttgagtataggtgattagattaaaactgtcatttt 188  Q
    ||||| |||||||||||| |||| || || || |||||||||||||||    
T  18428115 gtttatttcatggttgagcatagatggttggactaaaactgtcatttt 18428162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 7910954 - 7910763
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| ||| |||||||||  ||| |||||  |||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  7910954 tgggtacaaggaatctactttgtttagcacacaatccaaaaaaaaa-ctaatttctaagacatgtttcaggtatgtaacatgtctcagaaattaggttag 7910856  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||| ||||| |||||      |||||||||| |||||| ||||||||| |||||||||||  ||| ||| || || ||||||||||||||    
T  7910855 tgtgctggataaagtagattctttatacccacatgctttatt-ccttgtttatttcatggttgaacatatgtggtttgactaaaactgtcattt 7910763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 47 - 180
Target Start/End: Complemental strand, 2209006 - 2208868
Alignment:
Q  47 ctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtgtgctgaataaaatagat------tacccacatgttttattccctt 140  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||| || ||      ||||||||||||||||| | ||    
T  2209006 ctaatttctaagatatgtttcaggtatgtaacatgtttcggaaattaggttagtgtgctgaataaagtaaatttcttgtacccacatgttttatt-cttt 2208908  T
Q  141 gtttacttcatggttgagtataggtgattagattaaaact 180  Q
    ||||| |||||||||||| ||||||| || || |||||||    
T  2208907 gtttatttcatggttgagcataggtggttggactaaaact 2208868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 6115438 - 6115351
Alignment:
Q  11 gaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggtta 98  Q
    |||||||||| |||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6115438 gaatctactttgttcagcacacaaaccaaaaaaaac-ctaatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggtta 6115351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 26254634 - 26254736
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    ||||||||| |||| ||||| ||||||||||||||  || ||||| | ||||||  | |||| |||||| ||||||||||| ||||||||||||||||||    
T  26254634 tgggtacaatgaatttactttgttcagcacacaaacaaaaaaaaattataattttcacgacaggtttcatgtatgtaacatatctcgaaaattaggttag 26254733  T
Q  100 tgt 102  Q
    |||    
T  26254734 tgt 26254736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 7910949 - 7911016
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||||||||| ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  7910949 tacccacatgttttattcc-ttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 7911016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 16578393 - 16578341
Alignment:
Q  53 tctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtgtgct 105  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||| ||||    
T  16578393 tctaagacatgtttcagttatgtaacatgtctcggaaattaggttagtttgct 16578341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 599740 - 599797
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaa 57  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||| |||||||||||    
T  599740 tgggtacaaggaatcttctttgttcagcacacaaaccaagaaaaaccctaatttctaa 599797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 35427145 - 35427212
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  35427145 tacccacatgatttattcc-ttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 35427212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 42036121 - 42036172
Alignment:
Q  137 ccttgtttacttcatggttgagtataggtgattagattaaaactgtcatttt 188  Q
    ||||||||| |||||||||||||||||||| || || |||||||||||||||    
T  42036121 ccttgtttatttcatggttgagtataggtggttggactaaaactgtcatttt 42036172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 5731145 - 5731212
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||| ||| |||||||| ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  5731145 tacccatatgatttattcc-ttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 5731212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 16578429 - 16578496
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||||||||  ||||||| |||| ||||||| ||||||| || || ||||||||||||||    
T  16578429 tacccacatgttttattct-ttgtttatttcacggttgagcataggtggttggactaaaactgtcattt 16578496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 18049924 - 18049991
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||||| || || ||||||||| ||||    
T  18049924 tacccacatgatttattcc-ttgtttatttcatggttgagcataggtggttggagtaaaactgttattt 18049991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 35694083 - 35694016
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| | ||||| || || ||||||||||||||    
T  35694083 tacccacatgatttattcc-ttgtttatttcatggttgagcaaaggtggttggactaaaactgtcattt 35694016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 41260594 - 41260661
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||| ||| || || ||||||||||||||    
T  41260594 tacccacatgatttattcc-ttgtttatttcatggttgagcataagtggttggactaaaactgtcattt 41260661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 187
Target Start/End: Complemental strand, 9796938 - 9796872
Alignment:
Q  120 acccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||| |||||||| ||||||| || ||||||||| ||||||| || || ||||||||||||||    
T  9796938 acccacatgatttattcc-ttgtttattttatggttgagcataggtggttggactaaaactgtcattt 9796872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 28254759 - 28254826
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||  ||||||  |||||||||||| ||||||| || || ||||||||||||||    
T  28254759 tacccacatgatttattct-ttgtttctttcatggttgagcataggtggttggactaaaactgtcattt 28254826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 187
Target Start/End: Complemental strand, 35163892 - 35163844
Alignment:
Q  139 ttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  35163892 ttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 35163844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 41681346 - 41681279
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||| | ||||||| |||||||||||||||||| | |  | |||||||||||||||    
T  41681346 tacccacatgctttatttc-ttgtttatttcatggttgagtatagggggtatgtttaaaactgtcattt 41681279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 8e-54; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 26026526 - 26026718
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26026526 tgggtataaggaatctactttgttcagcacacaaaccaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggttag 26026625  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||| ||||||||||| ||      ||||||||||||||||| | ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  26026626 tgtgttgaataaaatatattccttgtacccacatgttttatt-ctttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 26026718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 48247799 - 48247991
Alignment:
Q  1 tgggtacaaggaatctacttgtt-cagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    ||||||||| |||||||||| || |||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  48247799 tgggtacaaagaatctacttttttcagcacactaaccaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggttag 48247898  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||||||||||||||||| | ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  48247899 tgtgctgaataaagtagatttcttgtacccacatgttttatt-ctttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 48247991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 26048285 - 26048094
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    ||||||||| |||||||||| ||| |||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  26048285 tgggtacaaagaatctactttgtttagcacacaaaccaagaaaaaccctaatttctaagacatgtttcaggtttgtaacatgtctcgaaaattagcttag 26048186  T
Q  100 tgtgctgaataaaatagattac-----ccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||| |     |||||||||||||| | ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  26048185 tgtgctgaataaagtagatttcttgtaccacatgttttatt-ctttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 26048094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 25637409 - 25637598
Alignment:
Q  4 gtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtgt 102  Q
    ||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||| ||||||| |||||||||||| ||    
T  25637409 gtacaaggaatctactttgttcagcacacaaaccaagaaaaaccctaatttctaagacatgtttcagatatgtaacgtgtctcggaaattaggttagcgt 25637508  T
Q  103 gctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||      ||||||||||||||||| | ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  25637509 gctgaataaagtagattccttgtacccacatgttttatt-ctttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 25637598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 16081637 - 16081445
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    ||||||||| |||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  16081637 tgggtacaaagaatctactttgttcagcacacaaaccaagaaaaactcttatttctaagacatgtttcaggtatgtaacatgtcttggaaattaggttag 16081538  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||| ||||||||| |||||      ||||||||||||||||| | ||||||| |||||||||||| ||| ||| || || ||||||||||||||    
T  16081537 tgtactgaataaagtagattccttgtacccacatgttttatt-ctttgtttatttcatggttgagcatatgtggttggactaaaactgtcattt 16081445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 35161139 - 35160947
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| ||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  35161139 tgggtacaaggaatctactttgttcagcacacaaactaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggttgg 35161040  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||||||||||||||||| | ||||||| |||||||||| | ||||||| || || ||||||| ||||||    
T  35161039 tgtgctgaataaagtagattcattgtacccacatgttttatt-ctttgtttatttcatggttgggcataggtggttggactaaaactatcattt 35160947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 7732696 - 7732866
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| ||| | |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7732696 tgggtacaaggaatctactttgtttaacacacaaaccaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggttag 7732795  T
Q  100 tgtgctgaataaaatagattac-----ccacatgttttattcccttgtttacttcatggttgagtataggtg 166  Q
    ||||||||||||| |||||| |     |||||||||||||| | ||||||| |||||||||||| |||||||    
T  7732796 tgtgctgaataaagtagattccttgtaccacatgttttatt-ctttgtttatttcatggttgagcataggtg 7732866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 5745977 - 5745785
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||||||||||| |||||||||  | |||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  5745977 tgggtacaaggaatctactttgttcagcacacaaaccaagaaaaatccaaatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggtttg 5745878  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||||||||  ||||||| | ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  5745877 tgtgctgaataaagtagattccttgtacccacacattttatt-ctttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 5745785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 27245412 - 27245597
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  27245412 tgggtataaggaatctactttgttcagcacacaaaccaagaaaaaccctaatttctaagacatgtttcaagtatgtaacatgtctcggaaattaggttag 27245511  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaact 180  Q
    |||||| |||||| |||||      |||||||||||||||||   ||||||| |||||||||||| ||||||| || || |||||||    
T  27245512 tgtgctcaataaagtagattccttgtacccacatgttttatt-atttgtttatttcatggttgagcataggtggttggactaaaact 27245597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 184
Target Start/End: Complemental strand, 787119 - 786932
Alignment:
Q  2 gggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagt 100  Q
    |||||||| |||||||||| ||||| |||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||   ||||||||||||     
T  787119 gggtacaaagaatctactttgttcaacacacaaaccaagaaaacc-ctaatttctaagacatgtttcaggtatgtaacatgtcttagaaattaggttagc 787021  T
Q  101 gtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtca 184  Q
    |||||||||||| |||||      ||||||||||||||||| ||||||||| |||||||||||  ||||||| ||  | |||||||||||    
T  787020 gtgctgaataaagtagattttttgtacccacatgttttatt-ccttgtttatttcatggttgaccataggtggttgaactaaaactgtca 786932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 3 - 181
Target Start/End: Original strand, 5334080 - 5334264
Alignment:
Q  3 ggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtg 101  Q
    |||||||||||||||||| |||||||||||||   || ||||||  |||||||||||| |||||||||||||||||||||||||  ||||||||||||||    
T  5334080 ggtacaaggaatctactttgttcagcacacaacaaaaaaaaaaccataatttctaagatatgtttcaggtatgtaacatgtctcagaaattaggttagtg 5334179  T
Q  102 tgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactg 181  Q
    ||||||||||| |||||      ||||| |||| |||||| ||||||||| |||||||||||| ||||||| || || ||||||||    
T  5334180 tgctgaataaagtagattccttgtacccgcatgctttatt-ccttgtttatttcatggttgagcataggtggttggactaaaactg 5334264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 14311498 - 14311687
Alignment:
Q  4 gtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtgt 102  Q
    |||||| |||||||||| |||||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||    
T  14311498 gtacaaagaatctactttgttcagcacataaactaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatgtctcggaaatttggttcgtgt 14311597  T
Q  103 gctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| || ||      ||||||||||||||||| | ||||||| ||||||||| |  ||||||| || || ||||| ||||||||    
T  14311598 gctgaataaagtatattccttgtacccacatgttttatt-ctttgtttatttcatggttaaacataggtggttggactaaaattgtcattt 14311687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 34594790 - 34594902
Alignment:
Q  1 tgggtacaaggaatctacttg-ttcagcacacaaatcaagaaaaactctaat-ttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggtta 98  Q
    ||||||||||||||||||||  |||||||||| ||  || |||||| ||||| |||||||||||||||||||||||||||||| ||   |||||||||||    
T  34594790 tgggtacaaggaatctactttattcagcacactaacaaaaaaaaac-ctaatgttctaagacatgtttcaggtatgtaacatggcttacaaattaggtta 34594888  T
Q  99 gtgtgctgaataaa 112  Q
    ||||||||||||||    
T  34594889 gtgtgctgaataaa 34594902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 47 - 187
Target Start/End: Original strand, 34595024 - 34595172
Alignment:
Q  47 ctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtgtgctgaataaaatagatt---------acccacatgttttattcc 137  Q
    ||||||| ||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||          ||||| || |||||| |    
T  34595024 ctaatttgtaagacatgtttcaggtatgtaacatgtcttacaaattaggttagtgtgctgaataaagtagattccgtgtgtagcccacgtgctttatt-c 34595122  T
Q  138 cttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||| |||||||||||| || |||| || || ||||||||||||||    
T  34595123 cttgtttatttcatggttgagcatgggtggttggactaaaactgtcattt 34595172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 82
Target Start/End: Complemental strand, 28687828 - 28687756
Alignment:
Q  11 gaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgt 82  Q
    |||||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  28687828 gaatctactttgttcaacacacaaaccaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatgt 28687756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 76 - 187
Target Start/End: Complemental strand, 11971600 - 11971484
Alignment:
Q  76 aacatgtctcgaaaattaggttagtgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgatt 169  Q
    ||||||||||||||||||||||||| ||||||||||| |||||      ||||||||||||||||| | ||||||| ||||| |||||| ||||||| ||    
T  11971600 aacatgtctcgaaaattaggttagtatgctgaataaagtagattcattgtacccacatgttttatt-ctttgtttatttcattgttgagcataggtggtt 11971502  T
Q  170 agattaaaactgtcattt 187  Q
     || ||||||||||||||    
T  11971501 ggactaaaactgtcattt 11971484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 11973740 - 11973660
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacat 80  Q
    |||||||||||||| ||||| |||||||||||||| |||||||| |  |||||||||| ||||||||||||||||||||||    
T  11973740 tgggtacaaggaatatactttgttcagcacacaaaccaagaaaacccataatttctaaaacatgtttcaggtatgtaacat 11973660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 39387373 - 39387287
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcg 86  Q
    ||||||||||||||||| || |||| ||||||||| |||||||||   ||||||  |||||||||||||||||||||||||||||||    
T  39387373 tgggtacaaggaatctagtttgttcggcacacaaaccaagaaaaatcataattttcaagacatgtttcaggtatgtaacatgtctcg 39387287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 5745972 - 5746039
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| ||||||||| || |||||||||| || ||||||||||||||    
T  5745972 tacccacatgatttattcc-ttgtttatttcatggttaagcataggtgattggactaaaactgtcattt 5746039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 28687832 - 28687899
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  28687832 tacccacatgatttattcc-ttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 28687899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 187
Target Start/End: Original strand, 2757961 - 2758098
Alignment:
Q  55 taagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtgtgctgaataaaatagat------tacccacatgttttattcccttgtttactt 148  Q
    ||||||||||||||||||||||||||||  |  |||||||||||||||  |||| ||| |||||      |||||||||  ||||||  |||||||| ||    
T  2757961 taagacatgtttcaggtatgtaacatgttccagaaattaggttagtgtcttgaacaaagtagatttcttgtacccacatactttatt-tcttgtttattt 2758059  T
Q  149 catggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||| || ||| ||| || || ||||||||||||||    
T  2758060 catggtttagcataagtggttggactaaaactgtcattt 2758098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 9181746 - 9181810
Alignment:
Q  123 cacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcatttt 188  Q
    ||||||||||||||  ||||||| |||||||||||| ||||||| || || |||||||||||||||    
T  9181746 cacatgttttattct-ttgtttatttcatggttgagcataggtggttggactaaaactgtcatttt 9181810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 7732701 - 7732634
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||| | |||||||| ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  7732701 tacccacaagatttattcc-ttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 7732634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 11973735 - 11973802
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||| || |||||||| ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  11973735 tacccacgtgatttattcc-ttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 11973802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 15712578 - 15712511
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||||||||  ||||||| |||||||||||| ||| ||| || || ||||||||||||||    
T  15712578 tacccacatgttttattcg-ttgtttatttcatggttgagcatatgtggttggactaaaactgtcattt 15712511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 27245417 - 27245350
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||||| || || ||||||| ||||||    
T  27245417 tacccacatgatttattcc-ttgtttatttcatggttgagcataggtggttggactaaaactatcattt 27245350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 33880918 - 33880985
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||||| ||| |||||||||| |||||||||||| ||||| |||  || ||||||||||||||    
T  33880918 tacccacatgttgtat-cccttgtttatttcatggttgagcataggggatatgactaaaactgtcattt 33880985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 48247804 - 48247737
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| ||||||| |||| ||||||| || || ||||||||||||||    
T  48247804 tacccacatgatttattcc-ttgtttatttcatggatgagcataggtggttggactaaaactgtcattt 48247737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 25637394 - 25637344
Alignment:
Q  137 ccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||| |||||||||||| ||||||| || | |||||||||||||||    
T  25637394 ccttgtttatttcatggttgagcataggtggttggcttaaaactgtcattt 25637344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 188
Target Start/End: Original strand, 16081632 - 16081700
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcatttt 188  Q
    |||||||||| |||||||| ||||||| |||||||||||  ||| ||| || || |||||||||||||||    
T  16081632 tacccacatgatttattcc-ttgtttatttcatggttgaacataagtggttggactaaaactgtcatttt 16081700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 5334083 - 5334016
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||| ||||| |||||||| ||||||| |||||||||||| ||||||  || || ||||||||||||||    
T  5334083 tacctacatgatttattcc-ttgtttatttcatggttgagcataggtagttggactaaaactgtcattt 5334016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 26026531 - 26026464
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||| ||| ||  | ||||||||||||||    
T  26026531 tacccacatgatttattcc-ttgtttatttcatggttgagcatatgtggttgaactaaaactgtcattt 26026464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 26048280 - 26048347
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||| ||| |||||||| ||||||| |||||||||||  ||||||| || || ||||||||||||||    
T  26048280 tacccatatgatttattcc-ttgtttatttcatggttgaacataggtggttggactaaaactgtcattt 26048347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 8e-54; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 29891288 - 29891480
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||||||||||| |||||||||  |||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  29891288 tgggtacaaggaatctactttgttcagcacacaaaccaagaaaaatcctaatttctaagacatgtttcaggcatgtaacatgtctcggaaattaggttag 29891387  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||||||||||||||||| | ||||||| |||||||||||||||||||| || || ||||||| ||||||    
T  29891388 tgtgctgaataaagtagattccttgtacccacatgttttatt-ctttgtttatttcatggttgagtataggtggttggactaaaactatcattt 29891480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 5114806 - 5114614
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  5114806 tgggtacaaggaatctactttgttcagcatacaaaccaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatatctcggaaattaggttag 5114707  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||||||| ||||||||| | ||||||| |||||||||||| ||||||| ||  | ||||||||||||||    
T  5114706 tgtgctgaataaagtagattccttgtacccacctgttttatt-ctttgtttatttcatggttgagcataggtggttgaactaaaactgtcattt 5114614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 30250899 - 30251091
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  30250899 tgggtacaaggaatctactttgttcagcacatagaccaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttaa 30250998  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||  |||||||| |||||      ||||||||||||||||| | ||||||| |||||||||||| ||||||| || || |||| |||||||||    
T  30250999 tgtattgaataaagtagattttttgtacccacatgttttatt-ctttgtttatttcatggttgaggataggtggttggactaaatctgtcattt 30251091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 31073480 - 31073290
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||| ||||||||| |||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  31073480 tgggtacaagaaatctactttgttcagcacataaaccaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggttag 31073381  T
Q  100 tgtgctgaataaa--atagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtc 183  Q
    |||||||||||||  ||||||      || |||||||||||||| | ||||||| |||||||||||||||||||| || || ||||||||||    
T  31073380 tgtgctgaataaagtatagattccttgtagccacatgttttatt-ctttgtttatttcatggttgagtataggtggttggactaaaactgtc 31073290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 8 - 187
Target Start/End: Original strand, 25472227 - 25472412
Alignment:
Q  8 aaggaatctacttgtt-cagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtgtgctg 106  Q
    ||||||||||||| || ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||    
T  25472227 aaggaatctacttttttcagcacacaaaccaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatgtcttggaaattaggttagtgtgatg 25472326  T
Q  107 aataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||| |||||      ||||||||||||||||| | ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  25472327 aataaagtagattcattgtacccacatgttttatt-ctttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 25472412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 26 - 187
Target Start/End: Original strand, 28636431 - 28636596
Alignment:
Q  26 gcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtgtgctgaataaaatagat------t 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||| |||||      |    
T  28636431 gcacacaaaccaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcggaaatgaggttagtgtactgaataaagtagattccttat 28636530  T
Q  120 acccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||||||  ||| |||| |||||||||||| ||||||| || || ||||||||||||||    
T  28636531 acccacatgttttatt--cttttttatttcatggttgagcataggtggttggactaaaactgtcattt 28636596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 31574063 - 31573871
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||  ||||||||| |||||||||  |||||||| || |||||||||||||||||||||||||||  ||||||||||||    
T  31574063 tgggtacaaggaatctactttgttacgcacacaaaccaagaaaaaacctaatttccaaaacatgtttcaggtatgtaacatgtctcagaaattaggttag 31573964  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||| |||||||| || ||      ||||||||||||||||| | ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  31573963 tgtgttgaataaagtatattccttgtacccacatgttttatt-ctttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 31573871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 187
Target Start/End: Original strand, 24640481 - 24640585
Alignment:
Q  88 aaattaggttagtgtgctgaataaaatagatt------acccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactg 181  Q
    ||||||||||||||||||||||||| ||||||      |||||||| ||||||||  ||||||| |||||||||||| ||||||| || || || |||||    
T  24640481 aaattaggttagtgtgctgaataaagtagattccttgtacccacatattttattct-ttgtttatttcatggttgagcataggtggttggactagaactg 24640579  T
Q  182 tcattt 187  Q
    ||||||    
T  24640580 tcattt 24640585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 29891293 - 29891226
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  29891293 tacccacatgatttattcc-ttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 29891226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 25469064 - 25468997
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||| | ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  25469064 tacccacatgatttatttc-ttgtttatttcatggttgagcataggtggttggaataaaactgtcattt 25468997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 31073475 - 31073542
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||  ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  31073475 tacccacatgatttattca-ttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 31073542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 31574058 - 31574125
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||||| || || ||||| ||||||||    
T  31574058 tacccacatgatttattcc-ttgtttatttcatggttgagcataggtggttggactaaaattgtcattt 31574125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 18505251 - 18505318
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattaga-ttaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||| | ||||| |||||||||||||||    
T  18505251 tacccacatgctttattcc-ttgtttatttcatggttgagcatagg-ggttagatttaaaactgtcattt 18505318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 28472849 - 28472805
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtatagg 164  Q
    ||||||||||||||||||| ||||||| |||||||||||| |||||    
T  28472849 tacccacatgttttattcc-ttgtttatttcatggttgagcatagg 28472805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 30250904 - 30250837
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||  ||||||| |||||| ||||| ||| |||||| || ||||||||||||||    
T  30250904 tacccacatgatttattca-ttgtttatttcatgattgagcataagtgattggactaaaactgtcattt 30250837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 2e-51; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 18150061 - 18149869
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||| |||||||| ||||||||| ||||||||||||    
T  18150061 tgggtataaggaatctactttgttcagcacacaaaccaagaaaaaccctaatttctaagacatgtttcgggtatgtagcatgtctcggaaattaggttag 18149962  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||||||||||||||||| | ||||||| |||||||||||| ||| ||| ||||| ||||||||||||||    
T  18149961 tgtgctgaataaagtagattcattgtacccacatgttttatt-ctttgtttatttcatggttgagcataagtggttagactaaaactgtcattt 18149869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 27 - 187
Target Start/End: Original strand, 8418856 - 8419021
Alignment:
Q  27 cacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtgtgctgaataaaatagat------ta 120  Q
    |||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||      ||    
T  8418856 cacacaaaccaagaaaaaccctaatttctaagacatatttcaggtatgtaacatgtctcgcaaattaggttagtgtgctgaataaagtagattccttgta 8418955  T
Q  121 cccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||||| ||||||||| |||||||||||| ||||||| || |||||||| ||||||||    
T  8418956 cccacatgttttatt-ccttgtttatttcatggttgagcataggtgtttggattaaaattgtcattt 8419021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 26 - 187
Target Start/End: Complemental strand, 19291668 - 19291503
Alignment:
Q  26 gcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtgtgctgaataaaatagat------t 119  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||      |    
T  19291668 gcacacaaataaaaaaaaactctaatttctaagacatgtttcaggtatgtaacatatctcggaaattaggttagtgtgctgaataaagtagatttcttgt 19291569  T
Q  120 acccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||| |||||||  |||||||| |||||| ||||| ||||||| || || ||||||||||||||    
T  19291568 acccacatattttatt--cttgtttatttcatgattgagcataggtggttggactaaaactgtcattt 19291503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 38900850 - 38901042
Alignment:
Q  1 tgggtacaaggaatctact-tgttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||| |||||||||||| |||||| |||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||  ||||||||||||    
T  38900850 tgggtataaggaatctactctgttcatcacacaaaccaagaaaaaccctaatttctaagacatgcttcaggtatgtaacatgtctcagaaattaggttag 38900949  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||| |||||||| |||||      ||||||||||||||||| | ||||||| |||||||||||   ||| || || || ||||||||||||||    
T  38900950 tgtgttgaataaagtagattctttgtacccacatgttttatt-ctttgtttatttcatggttgaaattagatggttggactaaaactgtcattt 38901042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 15029525 - 15029709
Alignment:
Q  4 gtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtgt 102  Q
    ||||||||||||||||| |||||| |||||||  || ||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||        
T  15029525 gtacaaggaatctactttgttcagtacacaaactaaaaaaaaccataatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggtta---- 15029620  T
Q  103 gctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
     ||||||||| |||||      ||||||||||||||||| | |||||||||||||||||||| ||||||| || || ||||||||||||||    
T  15029621 -ctgaataaagtagattctttgtacccacatgttttatt-ctttgtttacttcatggttgagcataggtggttggactaaaactgtcattt 15029709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 21371034 - 21370915
Alignment:
Q  1 tgggtacaaggaatctacttg-ttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    ||||||||| ||||||||||  ||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||| |||||    
T  21371034 tgggtacaaagaatctactttattcagcacacaaaccaagaaaaattctaatttctaagacatgtttcaggtatataacatgtctcggaaattatgttag 21370935  T
Q  100 tgtgctgaataaaatagatt 119  Q
    ||||||||||||| ||||||    
T  21370934 tgtgctgaataaagtagatt 21370915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 5161916 - 5161729
Alignment:
Q  1 tgggtacaaggaatctacttg-ttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    ||||||||||||||||||||  ||||||||||||  |||||||||   |||||||||||||||||||    |||||||||||||||| ||||||||||||    
T  5161916 tgggtacaaggaatctactttcttcagcacacaac-caagaaaaatcataatttctaagacatgttt----tatgtaacatgtctcggaaattaggttag 5161822  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||| |||||| |||||      ||||||||||||||||| | ||||||| |||||||||||| ||||||| ||  | ||||||||||||||    
T  5161821 tgtgcttaataaagtagattctttgtacccacatgttttatt-ctttgtttatttcatggttgagcataggtggttgaactaaaactgtcattt 5161729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 4 - 188
Target Start/End: Complemental strand, 22651680 - 22651490
Alignment:
Q  4 gtacaaggaatctacttg-ttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtgt 102  Q
    ||||||| |||||||||  |||||||||| ||  || |||||| | |||||||||||||||||||| |||||||||||||||    |||||||||||| |    
T  22651680 gtacaagaaatctactttattcagcacactaacaaaaaaaaacccaaatttctaagacatgtttcatgtatgtaacatgtcttagtaattaggttagtct 22651581  T
Q  103 gctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcatttt 188  Q
    |||||||||| |||||      |||||||||  |||||| |||| |||| |||||||||||| ||||||| || || |||||||| ||||||    
T  22651580 gctgaataaagtagattccttatacccacatactttatt-ccttatttatttcatggttgagcataggtggttggactaaaactgccatttt 22651490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 14340744 - 14340674
Alignment:
Q  3 ggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggta 72  Q
    |||| ||||||||||||| |||||||||||||| ||||||||||  |||||||||||||||||||||||||    
T  14340744 ggtagaaggaatctactttgttcagcacacaaaccaagaaaaaccataatttctaagacatgtttcaggta 14340674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 15115433 - 15115329
Alignment:
Q  1 tgggtacaaggaatctacttg-ttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    ||||||||||||||||||||  || |||||||||  ||| ||||||   |||||||||||||||||||| |||||||||||||| |  |||||| |||||    
T  15115433 tgggtacaaggaatctactttatttagcacacaatccaaaaaaaacctcaatttctaagacatgtttcaagtatgtaacatgtcccagaaattatgttag 15115334  T
Q  100 tgtgc 104  Q
    |||||    
T  15115333 tgtgc 15115329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 187
Target Start/End: Original strand, 4967041 - 4967169
Alignment:
Q  64 tttcaggtatgtaacatgtctcgaaaattaggttagtgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttga 157  Q
    ||||| ||||||||||||||||  |||||||||||||| |||||||||| |||||      |||||||||| |||||| ||||||||| |||||| ||||    
T  4967041 tttcatgtatgtaacatgtctcataaattaggttagtgcgctgaataaagtagatttcttgtacccacatgctttatt-ccttgtttatttcatgattga 4967139  T
Q  158 gtataggtgattagattaaaactgtcattt 187  Q
    | ||| ||| || || ||||||| ||||||    
T  4967140 gcatatgtggttggactaaaactatcattt 4967169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28289892 - 28289946
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttc 54  Q
    ||||||||| |||||||||| |||||||||||||| |||||||||| ||||||||    
T  28289892 tgggtacaaagaatctactttgttcagcacacaaaccaagaaaaaccctaatttc 28289946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 14340648 - 14340526
Alignment:
Q  69 ggtatgtaacatgtctcgaaaattaggttagtgtgctgaataaaatagatt------acccacatgttttattcccttgtttacttcatggttgagtata 162  Q
    ||||| |||||||||||| ||||||| |||||||| || ||||| ||||||      |||||||||||||||||  ||||||| |||||||||||  |||    
T  14340648 ggtatctaacatgtctcggaaattag-ttagtgtgttgtataaagtagattctttgtacccacatgttttattct-ttgtttatttcatggttgaacata 14340551  T
Q  163 ggtgattagattaaaactgtcattt 187  Q
     ||| || || ||||||||||||||    
T  14340550 agtggttggactaaaactgtcattt 14340526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 5161911 - 5161978
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| || |||| |||||||||||| ||||||| || ||||||||| |||||||    
T  5161911 tacccacatgatttattcc-ttatttatttcatggttgagcataggtggttggattaaaaccgtcattt 5161978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 21371029 - 21371096
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||||| ||  | ||||||||||||||    
T  21371029 tacccacatgatttattcc-ttgtttatttcatggttgagcataggtggttgaactaaaactgtcattt 21371096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 28289897 - 28289830
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||  ||||||| || || ||||||||||||||    
T  28289897 tacccacatgatttattcc-ttgtttatttcatggttgaacataggtggttggactaaaactgtcattt 28289830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 28289977 - 28290044
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||||||||  ||||||| |||||||||||| |||| || || || ||||||||||||||    
T  28289977 tacccacatgttttattct-ttgtttatttcatggttgagcatagatggttggactaaaactgtcattt 28290044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 95 - 187
Target Start/End: Original strand, 22651648 - 22651745
Alignment:
Q  95 gttagtgtgctgaataaaatagatt------acccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||||||||||| ||||||      || |||||| |||||||| || |||| |||||||||||| ||||||| || || ||||||||||||||    
T  22651648 gttagtgtgctgaataaagtagatttcttgtactcacatgctttattcc-ttatttatttcatggttgagcataggtggttggactaaaactgtcattt 22651745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 20265884 - 20265946
Alignment:
Q  2 gggtacaaggaatctacttg-ttcagcacacaaatcaagaaaaactctaatttctaagacatgtt 65  Q
    |||||||||||||||||||  |||  ||||||||||||  ||||| |||||||||||||||||||    
T  20265884 gggtacaaggaatctacttcattcttcacacaaatcaa--aaaaccctaatttctaagacatgtt 20265946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 15115428 - 15115495
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||| ||| ||  | ||||||||||||||    
T  15115428 tacccacatgctttattcc-ttgtttatttcatggttgagcatatgtggttgaactaaaactgtcattt 15115495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 24325543 - 24325610
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||| ||| |||||||| ||||||| |||||||||||| ||||| ||| ||  ||||||||||||||    
T  24325543 tacccagatgctttattcc-ttgtttatttcatggttgagcataggggataagtctaaaactgtcattt 24325610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 24331892 - 24331959
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||| |||  |  ||||||||||||||    
T  24331892 tacccacatgctttattcc-ttgtttatttcatggttgagcataggggataggtctaaaactgtcattt 24331959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 24362168 - 24362235
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||| ||| |||||||| ||||||| |||||||||||| ||||| ||| ||  ||||||||||||||    
T  24362168 tacccagatgctttattcc-ttgtttatttcatggttgagcataggggataagtctaaaactgtcattt 24362235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 39083573 - 39083506
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||||||||||   ||||||| |||||| ||||| ||| |||||| || ||||||||||||||    
T  39083573 tacccacatgttttatttt-ttgtttatttcatgattgagcatatgtgattggactaaaactgtcattt 39083506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 2e-51; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 9992493 - 9992301
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| ||||| || ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  9992493 tgggtacaaggaatctactttgttcaacaaacaaaccaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatgtctcaaaaattaggttag 9992394  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||||||||||||||||| | ||||||| |||||||||||| ||||||| |  || ||||||||||||||    
T  9992393 tgtgctgaataaagtagattctttgtacccacatgttttatt-ctttgtttatttcatggttgagcataggtggtcggactaaaactgtcattt 9992301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 30786980 - 30787172
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  30786980 tgggtacaaggaatctactttgttcagcacacaaaccaagaaaaaccctaatttctaagacatgtttcagatatgtaacatgtctcggaaattaggttag 30787079  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      || |||||||||||||| | ||||||| |||||||||||| ||||||  || || ||||||||||||||    
T  30787080 tgtgctgaataaagtagattccttgtatccacatgttttatt-ctttgtttatttcatggttgagcataggtagttggactaaaactgtcattt 30787172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 44954564 - 44954372
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    ||||||||||||||||| || |||||||||| ||| |||||||||| |||||||||||||||||||||||||  ||||||||||||| ||||||||||||    
T  44954564 tgggtacaaggaatctattttgttcagcacataaaccaagaaaaaccctaatttctaagacatgtttcaggtgcgtaacatgtctcggaaattaggttag 44954465  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||||||||||||||||| |||||||||||||||||||||| ||| ||| || || ||||||||||||||    
T  44954464 tgtgctgaataaagtagattccttgtacccacatgttttatt-ccttgtttacttcatggttgagcatatgtggttggactaaaactgtcattt 44954372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 5 - 187
Target Start/End: Original strand, 34555593 - 34555780
Alignment:
Q  5 tacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtgtg 103  Q
    |||||||||||||||| ||||||||||||||  ||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  34555593 tacaaggaatctactttgttcagcacacaaactaagaaaaatcctaatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggttagtgtg 34555692  T
Q  104 ctgaataaaatagattac-----ccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||| |||||| |     |||||||||||||| | ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  34555693 ctgaataaagtagatttcttgtaccacatgttttatt-ctttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 34555780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 10278757 - 10278950
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10278757 tgggtacaaggaatctactttgttcagcacacaaaccaagaaaaaccctaatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggttag 10278856  T
Q  100 tgtgctgaataaaa-tagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||||||| |||||      ||||||||| ||||||| | ||||||| |||||||||||  ||| ||| || || ||||||||||||||    
T  10278857 tgtgctgaataaaagtagattccttgtacccacatattttatt-ctttgtttatttcatggttgaacatatgtggttggactaaaactgtcattt 10278950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 44582265 - 44582457
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  44582265 tgggtacaaggaatctactttgttcagcacacagaccaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcggaaattatgttag 44582364  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    | |||| |||||| |||||      || |||||||||||||| | ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  44582365 tctgctaaataaagtagattctttgtagccacatgttttatt-ctttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 44582457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 50304993 - 50305182
Alignment:
Q  4 gtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtgt 102  Q
    |||||| |||||||||| |||||| ||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  50304993 gtacaaagaatctactttgttcagtacacaaaccaagaataaccctaatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggttagtgt 50305092  T
Q  103 gctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||      || |||||| ||||||| ||||||||| |||||||||||| ||| ||  || |||||||||||||||||    
T  50305093 gctgaataaagtagattccttgtatccacatattttatt-ccttgtttatttcatggttgagcataagtagttggattaaaactgtcattt 50305182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 16298890 - 16299082
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||||||||||||||| |||||| |||||||| ||||||||||||    
T  16298890 tgggtacaaggaatctactttgttcagcacacaaaccaagaaaaaccataatttctaagacatgtttcaggcatgtaaaatgtctcggaaattaggttag 16298989  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||| |||||||| |||||      |||||| |||||||||| | ||||||| |||||||||||||||||||| ||  | ||||| ||||||||    
T  16298990 tgtgttgaataaagtagattccttgtacccatatgttttatt-ctttgtttatttcatggttgagtataggtggttgaactaaaattgtcattt 16299082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 1744535 - 1744654
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||     
T  1744535 tgggtacaaggaatctactttgttcagcacacaaaccaagaaaaaccctaatttctaagacatgtttcaggtatgtagcatgtctcggaaattaggttat 1744634  T
Q  100 tgtgctgaataaaatagatt 119  Q
    ||||||||||||| ||||||    
T  1744635 tgtgctgaataaagtagatt 1744654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 4080229 - 4080349
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaa-actctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggtta 98  Q
    |||||||||||||| ||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  4080229 tgggtacaaggaatttactttgttcagcacacaaaccaagaaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcagaaattaggtta 4080328  T
Q  99 gtgtgctgaataaaatagatt 119  Q
    |||||||||||||| ||||||    
T  4080329 gtgtgctgaataaagtagatt 4080349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 17641702 - 17641511
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||| ||||||||| ||||| |||||||| |||||||||| |||||| |||||||||||||||| |||||||||||||||  ||||||||||||    
T  17641702 tgggtacaagaaatctactttgttcatcacacaaaccaagaaaaac-ctaattgctaagacatgtttcagatatgtaacatgtctcagaaattaggttag 17641604  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| |||||      ||||| ||||||||||| ||||||||| |||||||||||  ||||||| ||  | ||||||||||||||    
T  17641603 tgtgctgaataaagtagattccttgtacccgcatgttttatt-ccttgtttatttcatggttgaacataggtggttgaactaaaactgtcattt 17641511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 37505406 - 37505238
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| |||||||||||||| |||||||| | |||||||||||||| ||||||||||| ||||||||||||| ||||||||||||    
T  37505406 tgggtacaaggaatctactttgttcagcacacaaaccaagaaaatccctaatttctaagacgtgtttcaggtacgtaacatgtctcggaaattaggttag 37505307  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtatag 163  Q
    |||| |||||||| |||||      ||| ||||||||||||| | ||||||| |||||||||||| ||||    
T  37505306 tgtgttgaataaagtagattttttgtactcacatgttttatt-ctttgtttatttcatggttgagcatag 37505238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 36 - 187
Target Start/End: Complemental strand, 21938865 - 21938709
Alignment:
Q  36 caagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttagtgtgctgaataaaatagat------tacccacatgt 129  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |      |||||| ||||    
T  21938865 caagaaaaaccctaatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggttagtgtgctgaataaagtagtttccttgtacccatatgt 21938766  T
Q  130 tttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||   ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  21938765 tttatt-ttttgtttatttcatggttgagcataggtggttggactaaaactgtcattt 21938709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 29439139 - 29439331
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    ||||||||| |||||||||| ||||| |||||||| ||||||| ||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29439139 tgggtacaaagaatctactttgttcatcacacaaaccaagaaataccataatttctaagacatgtttcaggtatgtaacatgtctcggaaattaggttag 29439238  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||||||||| ||| |      |||||||||| ||||||   || |||| |||||||||||  ||||||| || || ||||||||||||||    
T  29439239 tgtgctgaataaagtagtttctttatacccacatgctttatt-atttatttatttcatggttgaacataggtggttggactaaaactgtcattt 29439331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 8229979 - 8229786
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactct-aatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggtta 98  Q
    |||||||||||||||||||| |||||||  |||| | || |||||  || |||||||||||||||||| ||||||||||||||||||  |||||||||||    
T  8229979 tgggtacaaggaatctactttgttcagcgtacaactaaaaaaaaaaccttaatttctaagacatgtttgaggtatgtaacatgtctcagaaattaggtta 8229880  T
Q  99 gtgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||| |||||||| |||||      |||||||||| ||||||  |||||||| |||||||||||| ||| ||  || || ||||||||||||||    
T  8229879 gtgtgttgaataaagtagattcattgtacccacatgctttatt-tcttgtttatttcatggttgagcatatgtagttggactaaaactgtcattt 8229786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 1837714 - 1837818
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| ||||| |||||||| |||||||| | ||||||||||||||||||||||||||| |||||| | ||| ||||||||||||    
T  1837714 tgggtacaaggaatctactttgttcatcacacaaaccaagaaaacc-ctaatttctaagacatgtttcaggtatctaacatatttcggaaattaggttag 1837812  T
Q  100 tgtgct 105  Q
    ||||||    
T  1837813 tgtgct 1837818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 443889 - 443787
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||||||||| ||||| ||||||||  ||||||||| ||||||| ||||||||||||||||||||||| |||| |||||||||| | |||    
T  443889 tgggtacaaggaatctactttgttcaacacacaaactaagaaaaaccctaatttttaagacatgtttcaggtatgtaatatgtttcgaaaattaaggtag 443790  T
Q  100 tgt 102  Q
    |||    
T  443789 tgt 443787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 47 - 187
Target Start/End: Original strand, 29021111 - 29021264
Alignment:
Q  47 ctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattag--------gttagtgtgctgaataaaatagat------tacccacatgtttt 132  Q
    ||||||||||||||||||||||| ||||||||||||||   |||||||        |||||||||||||||||| |||||      ||||||||||||||    
T  29021111 ctaatttctaagacatgtttcagatatgtaacatgtcttagaaattagttttttttgttagtgtgctgaataaagtagattccttgtacccacatgtttt 29021210  T
Q  133 attcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||| | ||||||| |||||||||||| ||||||| || ||  |||||||||||||    
T  29021211 att-ctttgtttatttcatggttgagcataggtggttggacaaaaactgtcattt 29021264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 50926579 - 50926496
Alignment:
Q  1 tgggtacaaggaatctact-tgttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtct 84  Q
    ||||||||||||||||| | | |||||||||| || ||| |||||| |||||||||||||||||| |||||||||||||||||||    
T  50926579 tgggtacaaggaatctattatattcagcacactaa-caaaaaaaaccctaatttctaagacatgtatcaggtatgtaacatgtct 50926496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 37421375 - 37421308
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||||| ||||| ||||||||||||||    
T  37421375 tacccacatgatttattcc-ttgtttatttcatggttgagcataggtggttagactaaaactgtcattt 37421308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 34011602 - 34011559
Alignment:
Q  60 catgtttcaggtatgtaacatgtctcgaaaattaggttagtgtg 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  34011602 catgtttcaggtatgtaacatgtctcggaaattaggttagtgtg 34011559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 188
Target Start/End: Original strand, 37505401 - 37505469
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcatttt 188  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||||| || || |||||||||||||||    
T  37505401 tacccacatgatttattcc-ttgtttatttcatggttgagcataggtggttggactaaaactgtcatttt 37505469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 1744540 - 1744473
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||||| || || ||||||||||||||    
T  1744540 tacccacatgatttattcc-ttgtttattttatggttgagtataggtggttggactaaaactgtcattt 1744473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 9992488 - 9992555
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| |||| || || |||||||||||||||||    
T  9992488 tacccacatgatttattcc-ttgtttatttcatggttgagcatagatggttggattaaaactgtcattt 9992555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 23340395 - 23340453
Alignment:
Q  5 tacaaggaatctac-ttgttcagcacacaaatcaagaaaaactctaatttctaagacat 62  Q
    |||||||||||||| |||||||| ||||||| |||||||| ||||||||| ||||||||    
T  23340395 tacaaggaatctactttgttcagaacacaaaccaagaaaatctctaatttttaagacat 23340453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 16298895 - 16298828
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||||| || || ||||||| ||||||    
T  16298895 tacccacatgatttattcc-ttgtttatttcatggttgagcataggtggttggactaaaactatcattt 16298828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 187
Target Start/End: Original strand, 44954578 - 44954626
Alignment:
Q  139 ttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||||||||||||| ||||||| || || ||||||||||||||    
T  44954578 ttgtttacttcatggttgagcataggtggtttgactaaaactgtcattt 44954626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 4080234 - 4080166
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcatttt 188  Q
    |||||||||| |||||||| ||||||| |||||||||||  |||| || || || |||||||||||||||    
T  4080234 tacccacatgatttattcc-ttgtttatttcatggttgaacatagatggttggactaaaactgtcatttt 4080166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 9019186 - 9019142
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtatagg 164  Q
    ||||||||||||||||||| ||||||| |||||||||||| |||||    
T  9019186 tacccacatgttttattcc-ttgtttatttcatggttgagcatagg 9019142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 17088472 - 17088516
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtatagg 164  Q
    ||||||||||||||||||| ||||||| |||||||||||| |||||    
T  17088472 tacccacatgttttattcc-ttgtttatttcatggttgagcatagg 17088516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 21856375 - 21856419
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtatagg 164  Q
    ||||||||||||||||||| ||||||| |||||||||||| |||||    
T  21856375 tacccacatgttttattcc-ttgtttatttcatggttgagcatagg 21856419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 29439144 - 29439076
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcatttt 188  Q
    |||||| ||| |||||||| ||||||| |||||||||||| ||||||| || || ||||||||| |||||    
T  29439144 tacccatatgatttattcc-ttgtttatttcatggttgagcataggtggttggactaaaactgttatttt 29439076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 50304991 - 50304927
Alignment:
Q  123 cacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcatttt 188  Q
    |||||| |||||||| ||||||| |||||||||||| ||||||| || |||||||| || ||||||    
T  50304991 cacatgatttattcc-ttgtttatttcatggttgagcataggtggttggattaaaattgccatttt 50304927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 50926440 - 50926504
Alignment:
Q  1 tgggtacaaggaatctact-tgttcagcacacaaatcaagaaaaactctaatttctaagacatgtt 65  Q
    ||||||||||||||||| | | |||||||||| || ||| |||||| |||||||||||||||||||    
T  50926440 tgggtacaaggaatctattatattcagcacactaa-caaaaaaaaccctaatttctaagacatgtt 50926504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 1837719 - 1837651
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    ||||||| || |||||||| |  |||| |||||||||||| ||||||| || || ||||||||||||||    
T  1837719 tacccacttgatttattccttgttttatttcatggttgagcataggtggttggactaaaactgtcattt 1837651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 17433429 - 17433362
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||| |||  |  ||||||||||||||    
T  17433429 tacccacatgctttattcc-ttgtttatttcatggttgagcataggggataggtctaaaactgtcattt 17433362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 30786985 - 30786918
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||| ||| || || |||||| |||||||    
T  30786985 tacccacatgatttattcc-ttgtttatttcatggttgagcataagtggttggactaaaaccgtcattt 30786918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 39154232 - 39154165
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||| |||  |  ||||||||||||||    
T  39154232 tacccacatgctttattcc-ttgtttatttcatggttgagcataggggatgggtctaaaactgtcattt 39154165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 44582270 - 44582203
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||||||| |||||||| ||||| | |||||||||||| ||||||| || || ||||| ||||||||    
T  44582270 tacccacatgatttattcc-ttgttcatttcatggttgagcataggtggttggactaaaattgtcattt 44582203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 52335843 - 52335910
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||| ||||| |||||||| ||||||| |||||||||||| ||| ||| || || ||||||||||||||    
T  52335843 tacctacatgatttattcc-ttgtttatttcatggttgagcatatgtggttggactaaaactgtcattt 52335910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 91; Significance: 3e-44; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 46475 - 46667
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||||||| ||||| ||| |||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  46475 tgggtacaaggaatttactttgtttagcacacaaaccaagaaaaaccctaatttctaatacatgtttcaggtatgtaacatgtctcggaaattaggttag 46574  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||||| |||||| |||||      ||||||||||||||||| ||||||||| |||||| ||||| ||||||| || ||  |||| ||||||||    
T  46575 tgtgctaaataaagtagattccttgtacccacatgttttatt-ccttgtttatttcatgattgagcataggtggttggaccaaaattgtcattt 46667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 46480 - 46412
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcatttt 188  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||||| || || |||||||||||||||    
T  46480 tacccacatgatttattcc-ttgtttatttcatggttgagcataggtggttggactaaaactgtcatttt 46412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 6729 - 6538
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||| ||||||||| ||||| |||| ||| |||||||| | ||||||||| ||||||||| |||||||||||||||||||  ||||||||||||    
T  6729 tgggtacaagcaatctactttgttcaacacagaaaccaagaaaacc-ctaatttctcagacatgttgcaggtatgtaacatgtctcagaaattaggttag 6631  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||| |||||||| |||||      ||||||||||||||||| | ||||||| || ||||||||| ||| ||| || || ||||||||||||||    
T  6630 tgtgttgaataaagtagattccttgtacccacatgttttatt-ctttgtttattttatggttgagcatatgtggttggaataaaactgtcattt 6538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 6747 - 6556
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctcgaaaattaggttag 99  Q
    |||||||||| ||||||||| ||||| |||| ||| |||||||| | ||||||||| ||||||||| |||||||||||||||||||  ||||||||||||    
T  6747 tgggtacaagcaatctactttgttcaacacagaaaccaagaaaacc-ctaatttctcagacatgttgcaggtatgtaacatgtctcagaaattaggttag 6649  T
Q  100 tgtgctgaataaaatagat------tacccacatgttttattcccttgtttacttcatggttgagtataggtgattagattaaaactgtcattt 187  Q
    |||| |||||||| |||||      ||||||||||||||||| | ||||||| || ||||||||| ||| ||| || || ||||||||||||||    
T  6648 tgtgttgaataaagtagattccttgtacccacatgttttatt-ctttgtttattttatggttgagcatatgtggttggaataaaactgtcattt 6556  T

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Target: scaffold0025 (Bit Score: 70; Significance: 9e-32; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 84408 - 84493
Alignment:
Q  1 tgggtacaaggaatctactt-gttcagcacacaaatcaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctc 85  Q
    |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  84408 tgggtacacggaatctactttgttcagcacacaaaccaagaaaaactctaatttctaagacatgtttcaggtatgtaacatgtctc 84493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 5006 - 4962
Alignment:
Q  119 tacccacatgttttattcccttgtttacttcatggttgagtatagg 164  Q
    ||||||||||||||||||| ||||||| |||||||||||| |||||    
T  5006 tacccacatgttttattcc-ttgtttatttcatggttgagcatagg 4962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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