View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4791-Insertion-1 (Length: 956)
Name: NF4791-Insertion-1
Description: NF4791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4791-Insertion-1 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 402; Significance: 0; HSPs: 18)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 485 - 955
Target Start/End: Complemental strand, 39189014 - 39188541
Alignment:
| Q |
485 |
gtattacgagattgagctagtatcattcgtaaaagtaaatacataacttgatgatactttgcaattgtgcactgattatatttcaatgttggttattaaa |
584 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39189014 |
gtattacgagattgagctagtatcattcgtaaaggtaaatacataacttgatgatactttgcaattgtgcactgattatatttcaatgttggttattaaa |
39188915 |
T |
|
| Q |
585 |
attctattattcaaaagaaaagctagccgctgttgcttatcaaaattcacaagaataagaatagaataaaatttcaaaacatagcagggaactacctttt |
684 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39188914 |
attctattattcaaaagaaaagctagcagctgttgcttatcaaaattcacaagaataagaatagaataaaatttcaaaacatagcagggaactacctttt |
39188815 |
T |
|
| Q |
685 |
gtttctatgctatttccaagttcagtatttttctactgtttttcatattcttggtttagcaaggaagtcttgctatagttaatttggaaagcctttcttg |
784 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39188814 |
gtttatatgctatttccaagttcagtatttttctactgtttttcatgttcttggtttagcaaggaagtcttgctatagttaatttggaaagcctttcttg |
39188715 |
T |
|
| Q |
785 |
gcacgataaagagtcaaatgcttcactgtgctctaagggctctggttgttaaggattcctaagaaaatatgtagcattgggttagca-ggttaaacgtta |
883 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
39188714 |
gcacgataaagagtcaaatgcttaactgtgctctaagggctctggttgttaaggattcctaagaaaatatgtagcatt-ggttagcagggttaaacgtta |
39188616 |
T |
|
| Q |
884 |
cactcttctatgaataattttcaaattccttaacgtg-ttttagaacattgttt---caggatttaaataagaatg |
955 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
39188615 |
cactcttctatgaataattttcaaattcc-tcacgtgtttttagaacattgtttagcaaggatttaaataagaatg |
39188541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 129 - 601
Target Start/End: Original strand, 2794758 - 2795236
Alignment:
| Q |
129 |
tctgatgtgatttttcctcattttgcatttttgtagcgaaactaactggtaagctgcaagatggcactgtattttttaccaaaggccatggtgacgatga |
228 |
Q |
| |
|
||||||||||| | |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| || ||| || |||| | ||| |
|
|
| T |
2794758 |
tctgatgtgatatatcctcattttgcatttttgtagtgaaactaattggtaagctgcaagatggcactgtattttttaagaagggctatagtgatggtga |
2794857 |
T |
|
| Q |
229 |
tcaagcggagccattt-aatttaaaacaaatgagagtaatgagaattttcccaatgctttaccctctcacattaatttctttttatatcaactgaagtca |
327 |
Q |
| |
|
| ||| ||||| ||| ||||||||||| ||||| ||||| |||||| || ||| || |||||||||| |||||| |||||||||||||| |||| | |
|
|
| T |
2794858 |
tgaagtggagctgtttgaatttaaaacagatgagggtaattttaatttttcc-atgtttcaccctctcaccataatttgtttttatatcaactaaagtga |
2794956 |
T |
|
| Q |
328 |
atgtttgtttattattttgggcagagcaagtgattaaggggcttgataaagctgtaatgaccatgaagaagggtgaggtagctttgttgactatttggcc |
427 |
Q |
| |
|
| || || || | ||| ||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
2794957 |
a----tgctttttgtattgagcagagcaagtgattgatgggcttgataaagctgtactgaccatgaagaagggtgaggtagctttgttgactattacacc |
2795052 |
T |
|
| Q |
428 |
taaatatgcttttggt---------tctcaacctaaattggccttggttcctcctaattcaaccatgtattacgagattgagctagtatcattcgtaaaa |
518 |
Q |
| |
|
| |||||||||||||| ||||| | ||||||| |||||||||||||||||||| ||||||| ||| ||||||||||||| |||||||| |
|
|
| T |
2795053 |
tgaatatgcttttggttcatcagagtctcagcaggaattggcagtggttcctcctaattcaaccgtgtattatgaggttgagctagtatcgttcgtaaag |
2795152 |
T |
|
| Q |
519 |
gtaaatacataacttgatgatactttgcaattgtgcactg-attatatttcaatgttggttattaaaattctattattcaaaag |
601 |
Q |
| |
|
||||||| |||||||||||||| || ||||||||||| || ||| |||| ||||| || |||||||||||||||| ||||| |
|
|
| T |
2795153 |
gtaaataaataacttgatgataattagcaattgtgcattgtgacatacttcattgttgttttttaaaattctattattgaaaag |
2795236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 155; E-Value: 9e-82
Query Start/End: Original strand, 129 - 601
Target Start/End: Complemental strand, 2876959 - 2876480
Alignment:
| Q |
129 |
tctgatgtgatttttcctcattttgcatttttgtagcgaaactaactggtaagctgcaagatggcactgtattttttaccaaaggccatggtgacgatga |
228 |
Q |
| |
|
||||||||||| | |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| || || || |||| | ||| |
|
|
| T |
2876959 |
tctgatgtgatatatcctcattttgcatttttgtagtgaaactaattggtaagctgcaagatggcactgtattttttaagaagggatatagtgatggtga |
2876860 |
T |
|
| Q |
229 |
tcaagcggagccattt-aatttaaaacaaatgagagtaatgagaattttcccaatgctttaccctctcacattaatttctttttatatcaactgaagtca |
327 |
Q |
| |
|
| ||| ||||| ||| ||||||||||| | ||| ||||| ||||||||| ||| || |||||||||| |||||| |||||||||||||| |||| | |
|
|
| T |
2876859 |
tgaagtggagctgtttgaatttaaaacagacgagggtaattttaattttccccatgtttcaccctctcaccataatttgtttttatatcaactaaagtga |
2876760 |
T |
|
| Q |
328 |
atgtttgtttattattttgggcagagcaagtgattaaggggcttgataaagctgtaatgaccatgaagaagggtgaggtagctttgttgactatttggcc |
427 |
Q |
| |
|
||| || || | ||| ||||||||||||||| | |||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||| ||| |
|
|
| T |
2876759 |
atgctttttg----tattgagcagagcaagtgattgatgggcttgatagagctgtactgaccatgaagaaggatgaggtagctttgttgactattgcgcc |
2876664 |
T |
|
| Q |
428 |
taaatatgcttttggt---------tctcaacctaaattggccttggttcctcctaattcaaccatgtattacgagattgagctagtatcattcgtaaaa |
518 |
Q |
| |
|
| |||||||||||||| ||||| | ||||||| |||||||||||||||||||| ||||||| ||| |||||||||||||||||||||| |
|
|
| T |
2876663 |
tgaatatgcttttggttcatcagagtctcagcaggaattggcagtggttcctcctaattcaaccgtgtattatgaggttgagctagtatcattcgtaaag |
2876564 |
T |
|
| Q |
519 |
gtaaatacataacttgatgatactttgcaattgtgcactg-attatatttcaatgttggttattaaaattctattattcaaaag |
601 |
Q |
| |
|
||| ||| |||||||||||||| || | ||||||||| || |||||||| ||||| || |||||||||||||||| ||||| |
|
|
| T |
2876563 |
gtatataaataacttgatgataattagtaattgtgcattgtgacatatttcattgttgttttttaaaattctattattgaaaag |
2876480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 129 - 601
Target Start/End: Original strand, 3143850 - 3144335
Alignment:
| Q |
129 |
tctgatgtgatttttcctcattttgcatttttgtagcgaaactaactggtaagctgcaagatggcactgtattttttaccaaaggccat------ggtga |
222 |
Q |
| |
|
||||||||| | | |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| | ||| || || ||||| |
|
|
| T |
3143850 |
tctgatgtgttatctcctcattttgcatttttgtagtaaaactaattggtaagctgcaagatggcactgtatttttgaacaagggatataatgatggtga |
3143949 |
T |
|
| Q |
223 |
cgatgatcaagcggagccattt-aatttaaaacaaatgagagtaatgagaattttcccaatgctttaccctctcacattaatttctttttatatcaactg |
321 |
Q |
| |
|
|||||| ||||||| | ||| ||||||||||| | ||| ||||| ||||||||||||| || |||||||||| | |||| |||||| ||||| | |
|
|
| T |
3143950 |
tgatgatgaagcggatctgtttgaatttaaaacagacgagggtaattttaattttcccaatgtttcaccctctcaccatcatttgtttttaaatcaaata |
3144049 |
T |
|
| Q |
322 |
aagtcaatgtttgtttattattttgggcagagcaagtgattaaggggcttgataaagctgtaatgaccatgaagaagggtgaggtagctttgttgactat |
421 |
Q |
| |
|
|||| |||| || || | ||| ||||||||||||||| | |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
3144050 |
aagtgaatgctttttg----tattgagcagagcaagtgattgatgggcttgataaagctgtactgaccatgaagaaaggtgaggtagctttgttgactat |
3144145 |
T |
|
| Q |
422 |
ttggcctaaatatgcttttggt---------tctcaacctaaattggccttggttcctcctaattcaaccatgtattacgagattgagctagtatcattc |
512 |
Q |
| |
|
| |||| |||||||||||||| ||||| | ||||||| |||||||||||||||||||| ||||||| ||| ||||||||||||| ||| |
|
|
| T |
3144146 |
tacgcctgaatatgcttttggttcatcagagtctcagcaggaattggcagtggttcctcctaattcaaccgtgtattatgaggttgagctagtatcgttc |
3144245 |
T |
|
| Q |
513 |
gtaaaagtaaatacataacttgatgatactttgcaattgtgcactg-attatatttcaatgttggttattaaaattctattattcaaaag |
601 |
Q |
| |
|
||||| ||||||| |||||||||||||| || ||||||||||| || |||||||| || || || |||||||||||||||| ||||| |
|
|
| T |
3144246 |
gtaaaggtaaataaataacttgatgataattagcaattgtgcattgtgacatatttcattgctgttttttaaaattctattattgaaaag |
3144335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 129 - 601
Target Start/End: Complemental strand, 2891413 - 2890930
Alignment:
| Q |
129 |
tctgatgtgatttttcctcattttgcatttttgtagcgaaactaactggtaagctgcaagatggcactgtattttttaccaaaggccat------ggtga |
222 |
Q |
| |
|
||||||||| | | |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| | ||| || || ||||| |
|
|
| T |
2891413 |
tctgatgtgttatctcctcattttgcatttttgtagtaaaactaattggtaagctgcaagatggcactgtatttttgaacaagggatataatgatggtga |
2891314 |
T |
|
| Q |
223 |
cgatgatcaagcggagccattt-aatttaaaacaaatgagagtaatgagaattttcccaatgctttaccctctcacattaatttctttttatatcaactg |
321 |
Q |
| |
|
|||||| ||||||| | ||| ||||||||||| | ||| ||||| ||||||||||||| || |||||||||| | |||| |||||| ||||| | |
|
|
| T |
2891313 |
tgatgatgaagcggatctgtttgaatttaaaacagacgagggtaattttaattttcccaatgtttcaccctctcaccatcatttgtttttaaatcaaata |
2891214 |
T |
|
| Q |
322 |
aagtcaatgtttgtttattattttgggcagagcaagtgattaaggggcttgataaagctgtaatgaccatgaagaagggtgaggtagctttgttgactat |
421 |
Q |
| |
|
|||| |||| || || | ||| ||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2891213 |
aagtgaatgctttttg----tattgagcagagcaagtgattgatgggcttgataaagctgtactgaccatgaagaagggtgaggtagctttgttgactat |
2891118 |
T |
|
| Q |
422 |
ttggcctaaatatgcttttggt---------tctcaacctaaattggccttggttcctcctaattcaaccatgtattacgagattgagctagtatcattc |
512 |
Q |
| |
|
| |||| |||||||||||||| ||||| | ||||||| |||||||||||||||||||| |||||| ||| ||||||||||||| ||| |
|
|
| T |
2891117 |
tacgcctgaatatgcttttggttcatcagagtctcagcaggaattggcagtggttcctcctaattcaacc--gtattatgaggttgagctagtatcgttc |
2891020 |
T |
|
| Q |
513 |
gtaaaagtaaatacataacttgatgatactttgcaattgtgcactg-attatatttcaatgttggttattaaaattctattattcaaaag |
601 |
Q |
| |
|
||||| ||||||| |||||||||||||| || ||||||||||| || |||||||| || || || |||||||||||||||| ||||| |
|
|
| T |
2891019 |
gtaaaggtaaataaataacttgatgataattagcaattgtgcattgtgacatatttcattgctgttttttaaaattctattattgaaaag |
2890930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 348 - 595
Target Start/End: Complemental strand, 14388891 - 14388636
Alignment:
| Q |
348 |
gcagagcaagtgattaaggggcttgataaagctgtaatgaccatgaagaagggtgaggtagctttgttgactatttggcctaaatatgcttttggt---- |
443 |
Q |
| |
|
||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| || | |||||||||||| |
|
|
| T |
14388891 |
gcagagcaagtgattgatgggctcgataaagctgtaatgaccatgaagaagggtgaggtagcattgttgactattgcacccgagtatgcttttggttcat |
14388792 |
T |
|
| Q |
444 |
-----tctcaacctaaattggccttggttcctcctaattcaaccatgtattacgagattgagctagtatcattcgtaaaagtaaatacataacttgatga |
538 |
Q |
| |
|
||||| | ||||||| |||| ||||||||||||||| ||||||| ||| ||||| ||||||| ||| |||| ||||||| ||||||| |||| |
|
|
| T |
14388791 |
ctgagtctcagcaggaattggcagtggtccctcctaattcaaccttgtattatgaggttgagttagtatcgttcataaaggtaaataaataacttaatga |
14388692 |
T |
|
| Q |
539 |
tactttgcaattgtgcactgattatatttcaatgttggttattaaaattctattatt |
595 |
Q |
| |
|
|| | |||||||||||| ||| ||||||||| | ||||||| || |||||| ||||| |
|
|
| T |
14388691 |
tattatgcaattgtgcattga-tatatttcactattggttagtataattcttttatt |
14388636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 349 - 601
Target Start/End: Original strand, 3158623 - 3158885
Alignment:
| Q |
349 |
cagagcaagtgattaaggggcttgataaagctgtaatgaccatgaagaagggtgaggtagctttgttgactatttggcctaaatatgcttttggt----- |
443 |
Q |
| |
|
|||||||||||||| | | |||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
3158623 |
cagagcaagtgattgatgtgcttaatatagctgtaatgaccatgaagaagggtgaggtagctttgttgactattgcgccacaatatgcttttggttcatc |
3158722 |
T |
|
| Q |
444 |
----tctcaacctaaattggccttggttcctcctaattcaaccatgtattacgagattgagctagtatcattcgtaaaagtaaatacataacttgatgat |
539 |
Q |
| |
|
|||| | ||||||| |||||||||||||||||||| ||||||| || ||||||||||||| || ||||| || | || |||||||| |||| |
|
|
| T |
3158723 |
agagtctcggcaggaattggcagtggttcctcctaattcaaccttgtattatcaggttgagctagtatcgtttgtaaaggttactaaataacttggtgat |
3158822 |
T |
|
| Q |
540 |
actttgcaattgtgcactga-ttatatttcaatgttggttattaaaattctattattcaaaag |
601 |
Q |
| |
|
| ||||| ||| |||| ||| |||||| | |||||| |||||||||||| |||||| ||||| |
|
|
| T |
3158823 |
aatttgccattttgcattgagatatattccgatgttgcttattaaaattccattattgaaaag |
3158885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 348 - 595
Target Start/End: Complemental strand, 3495297 - 3495042
Alignment:
| Q |
348 |
gcagagcaagtgattaaggggcttgataaagctgtaatgaccatgaagaagggtgaggtagctttgttgactatttggcctaaatatgcttttggt---- |
443 |
Q |
| |
|
||||||||||||||| | ||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||| || | |||||||||||| |
|
|
| T |
3495297 |
gcagagcaagtgattgatgggctcgatagagctgtaatgaccatgaagaagggtgaggtagcattgttgactattgcacccgagtatgcttttggttcat |
3495198 |
T |
|
| Q |
444 |
-----tctcaacctaaattggccttggttcctcctaattcaaccatgtattacgagattgagctagtatcattcgtaaaagtaaatacataacttgatga |
538 |
Q |
| |
|
|||| | ||||||| |||| ||||||||||||||| ||||||| ||| ||||| ||||||||||| |||| ||||||| || ||| |||| |
|
|
| T |
3495197 |
ccgagtctcggcaggaattggcagtggtccctcctaattcaaccttgtattatgaggttgagttagtatcattcataaaggtaaataaattgcttaatga |
3495098 |
T |
|
| Q |
539 |
tactttgcaattgtgcactgattatatttcaatgttggttattaaaattctattatt |
595 |
Q |
| |
|
|| | |||||||||||| ||| ||||||||| | ||||||| | |||||||||||| |
|
|
| T |
3495097 |
tattctgcaattgtgcattga-tatatttcactattggttaatgtaattctattatt |
3495042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 8627601 - 8627676
Alignment:
| Q |
131 |
tgatgtgatttttcctcattttgcatttttgtagcgaaactaactggtaagctgcaagatggcactgtatttttta |
206 |
Q |
| |
|
|||| |||| ||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
8627601 |
tgatatgatatttcctcattttgcattttcgtagtgaaactaattggtaagctgcaagatggcactgtatttttta |
8627676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 366 - 422
Target Start/End: Complemental strand, 3500430 - 3500374
Alignment:
| Q |
366 |
gggcttgataaagctgtaatgaccatgaagaagggtgaggtagctttgttgactatt |
422 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
3500430 |
gggcttgatagagctgtaatgaccatgaagaagggtgaggtagcgttgttgactatt |
3500374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 736 - 900
Target Start/End: Original strand, 3159093 - 3159261
Alignment:
| Q |
736 |
tggtttagcaaggaagtcttgctatagttaatttggaaagc---ctttcttggcacgataaagagtcaaatgcttcactgtgctctaagggctctggttg |
832 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||| ||||| ||||||||||| ||||||| ||||||||| |||||| | | |||||||| || | |
|
|
| T |
3159093 |
tggtttagcaaggaagtgttgttatagttaatttgcaaagctgtttttcttggcacaataaagaagcaaatgcttaactgtgttttcagggctcttgtgg |
3159192 |
T |
|
| Q |
833 |
tt-aaggattcctaagaaaatatgtagcattgggttagcag-gttaaacgttacactcttctatgaataa |
900 |
Q |
| |
|
|| |||| ||||| ||||| |||||||||| ||||||||| ||||||| ||||||| ||| || ||||| |
|
|
| T |
3159193 |
ttaaagggttccttagaaataatgtagcatt-ggttagcagtgttaaactttacacttttcaataaataa |
3159261 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 348 - 445
Target Start/End: Original strand, 1790878 - 1790975
Alignment:
| Q |
348 |
gcagagcaagtgattaaggggcttgataaagctgtaatgaccatgaagaagggtgaggtagctttgttgactatttggcctaaatatgcttttggttc |
445 |
Q |
| |
|
|||| |||||||| || |||||||||| ||||||||||| |||||||||||||||||||| | |||||||||| ||||| |||| ||||||||| |
|
|
| T |
1790878 |
gcagcgcaagtgactagagggcttgatagagctgtaatgagtatgaagaagggtgaggtagcatcgttgactattgcacctaagtatggttttggttc |
1790975 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 454 - 536
Target Start/End: Complemental strand, 2882678 - 2882596
Alignment:
| Q |
454 |
aattggccttggttcctcctaattcaaccatgtattacgagattgagctagtatcattcgtaaaagtaaatacataacttgat |
536 |
Q |
| |
|
||||||| |||||||||||||||||||| ||| ||| ||| | ||||||| |||||| ||||| ||||||| |||||||||| |
|
|
| T |
2882678 |
aattggcagtggttcctcctaattcaaccttgtgttatgaggtcgagctagcatcatttgtaaaggtaaataaataacttgat |
2882596 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 477 - 684
Target Start/End: Complemental strand, 3506205 - 3505997
Alignment:
| Q |
477 |
tcaaccatgtattacgagattgagctagtatcattcgtaaaagtaaatacataacttgatgatactttgcaattgtgcactgattatatttcaatgttgg |
576 |
Q |
| |
|
|||||||||||||| || |||||| |||||||||| | || ||||||| ||||||| | ||| | |||||||||| | | | | ||||||||| |||| |
|
|
| T |
3506205 |
tcaaccatgtattatcaggttgagcgagtatcattcttgaaggtaaataaataacttaaccataatctgcaattgtgta-ttaatctatttcaatattgg |
3506107 |
T |
|
| Q |
577 |
ttattaaaattctattattcaaaagaaaagctagccgctgttgcttatcaaaattcacaagaataagaatagaa--taaaatttcaaaacatagcaggga |
674 |
Q |
| |
|
||| ||||||||||| ||| ||||| || ||| | || ||| || |||||||||||||| |||||| |||| || | |||||||||| |||| ||| |
|
|
| T |
3506106 |
ttagtaaaattctatcattgaaaaggaacactaacaactattgtttgacaaaattcacaagattaagaagagaatctatactttcaaaacaaagcaagga |
3506007 |
T |
|
| Q |
675 |
actacctttt |
684 |
Q |
| |
|
||| |||||| |
|
|
| T |
3506006 |
actgcctttt |
3505997 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 3495504 - 3495443
Alignment:
| Q |
143 |
tcctcattttgcatttttgtagcgaaactaactggtaagctgcaagatggcactgtattttt |
204 |
Q |
| |
|
|||||||||||||| |||| || |||||||| ||||||| |||||||||||||||| ||||| |
|
|
| T |
3495504 |
tcctcattttgcatctttgcagtgaaactaattggtaagttgcaagatggcactgtcttttt |
3495443 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 14389078 - 14389017
Alignment:
| Q |
143 |
tcctcattttgcatttttgtagcgaaactaactggtaagctgcaagatggcactgtattttt |
204 |
Q |
| |
|
|||||||||||||| |||| || |||||| | ||||||| ||||||||| |||||||||||| |
|
|
| T |
14389078 |
tcctcattttgcatctttgaagtgaaacttattggtaagttgcaagatgacactgtattttt |
14389017 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 3500619 - 3500547
Alignment:
| Q |
132 |
gatgtgatttttcctcattttgcatttttgtagcgaaactaactggtaagctgcaagatggcactgtattttt |
204 |
Q |
| |
|
||||| || ||| |||||||||||||| ||||| |||||||| ||||| |||||||| |||| || ||||||| |
|
|
| T |
3500619 |
gatgtcatgttttctcattttgcatttgtgtagtgaaactaattggtaggctgcaaggtggctctatattttt |
3500547 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 3495629 - 3495580
Alignment:
| Q |
8 |
agaaggatatgagcttccaaataagggagctgttgtcaaaggtaaatcat |
57 |
Q |
| |
|
|||||||||||||| ||||||| | ||||||||||| ||| ||||||||| |
|
|
| T |
3495629 |
agaaggatatgagcgtccaaatgatggagctgttgtaaaatgtaaatcat |
3495580 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 349 - 422
Target Start/End: Complemental strand, 18847829 - 18847756
Alignment:
| Q |
349 |
cagagcaagtgattaaggggcttgataaagctgtaatgaccatgaagaagggtgaggtagctttgttgactatt |
422 |
Q |
| |
|
|||| ||||| ||| | |||||||||||||||||| |||| |||||||||||||||||||| || |||| |||| |
|
|
| T |
18847829 |
cagaacaagtcattgatgggcttgataaagctgtattgactatgaagaagggtgaggtagcattattgattatt |
18847756 |
T |
|
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