View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4791-Insertion-10 (Length: 217)
Name: NF4791-Insertion-10
Description: NF4791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4791-Insertion-10 |
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Alignment Details
Target: chr1 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 14177267 - 14177091
Alignment:
| Q |
9 |
atatatattgaaat-aagtgttcaagaacatagtttcagagtacatatatgcaatctatatggcttatttgtacatgtagattttgttcatatgtgccac |
107 |
Q |
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| T |
14177267 |
atatattttgaaattaagtgttcaagaacatagtttcaaagtacatatatgcaatctgtttggcctatttgtatatgcagattttggtcatatgtgccac |
14177168 |
T |
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| Q |
108 |
acattgttagctgcaaccattatttgcttttcaaaatatgttacaaccatttggtaaat-aaaataataaattagtgaaa |
186 |
Q |
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| T |
14177167 |
acattgttaattgcaacc---atttgcttttcaaaatatgttacaaccatttggtaaataaaaataataaattggtgaaa |
14177091 |
T |
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Target: chr6 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 19487443 - 19487487
Alignment:
| Q |
7 |
atatatatattgaaataagtgttcaagaacatagtttcagagtac |
51 |
Q |
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| T |
19487443 |
atatatattttgaaatcagtgttcaagaacatagtttcagagtac |
19487487 |
T |
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