View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4791-Insertion-9 (Length: 241)
Name: NF4791-Insertion-9
Description: NF4791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4791-Insertion-9 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 8 - 241
Target Start/End: Complemental strand, 48869166 - 48868932
Alignment:
| Q |
8 |
atatatagcattatgcatttcaatgagatgggtggttcagggacacattgtgaatacattcttgattgttgaggcacttgaaggatctttctcttcttat |
107 |
Q |
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| T |
48869166 |
atatataacattatgcatttcaatgagatgggtggttcagggaggcattgtgaatacattcttgattgttgaggcacttgaaggatctttctcttcttat |
48869067 |
T |
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| Q |
108 |
gtgaatctagtatttagaatcacgttgaaactcttttcaaactcatgatgagagtgacactactatctgtagcttaaatgttaatgaacaatgggagtga |
207 |
Q |
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| T |
48869066 |
gtgaatctagtatttagaatcacgttgaaactcttttcaaactcatgatgagagtgacactactatctgtagcttaaatgttaatgaacaatggaagtga |
48868967 |
T |
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| Q |
208 |
aataaccgtg-tttcatagtttgaagttggtttca |
241 |
Q |
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|||||||||| |||||||||||||||||||||||| |
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| T |
48868966 |
aataaccgtgttttcatagtttgaagttggtttca |
48868932 |
T |
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