View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4792-Insertion-5 (Length: 332)

Name: NF4792-Insertion-5
Description: NF4792
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4792-Insertion-5
NF4792-Insertion-5
[»] chr1 (80 HSPs)
chr1 (7-332)||(44707737-44708048)
chr1 (122-331)||(39864047-39864251)
chr1 (122-332)||(24991630-24991836)
chr1 (122-332)||(12039018-12039223)
chr1 (160-332)||(9307595-9307768)
chr1 (122-332)||(23168970-23169173)
chr1 (152-331)||(2572429-2572608)
chr1 (152-314)||(28748952-28749114)
chr1 (152-298)||(8896343-8896490)
chr1 (161-314)||(7759185-7759338)
chr1 (180-331)||(30754919-30755070)
chr1 (161-332)||(31042767-31042938)
chr1 (166-332)||(6023626-6023792)
chr1 (161-331)||(16395025-16395193)
chr1 (150-331)||(20209818-20209999)
chr1 (152-328)||(37506085-37506264)
chr1 (161-329)||(26093364-26093532)
chr1 (161-331)||(33733241-33733410)
chr1 (180-314)||(37276450-37276584)
chr1 (153-298)||(49223997-49224142)
chr1 (180-331)||(38787330-38787481)
chr1 (166-331)||(916999-917164)
chr1 (152-314)||(9379193-9379355)
chr1 (180-298)||(6160470-6160588)
chr1 (152-298)||(40144858-40145004)
chr1 (122-239)||(6785192-6785304)
chr1 (179-300)||(26257949-26258070)
chr1 (161-293)||(14757610-14757742)
chr1 (180-331)||(31978630-31978781)
chr1 (180-299)||(36701910-36702029)
chr1 (180-299)||(36718014-36718133)
chr1 (180-326)||(10495828-10495973)
chr1 (184-298)||(15699115-15699229)
chr1 (150-331)||(32825970-32826152)
chr1 (152-326)||(34031510-34031684)
chr1 (180-331)||(11449875-11450023)
chr1 (180-328)||(44761512-44761660)
chr1 (154-325)||(13579605-13579775)
chr1 (164-283)||(27896928-27897047)
chr1 (122-257)||(35367738-35367868)
chr1 (152-331)||(42409956-42410134)
chr1 (180-298)||(4441614-4441732)
chr1 (152-216)||(35682887-35682950)
chr1 (157-300)||(3260558-3260695)
chr1 (152-239)||(22856307-22856394)
chr1 (180-290)||(7351625-7351735)
chr1 (193-311)||(32970565-32970683)
chr1 (192-308)||(24880874-24880993)
chr1 (178-331)||(41080587-41080738)
chr1 (183-258)||(25089136-25089212)
chr1 (194-329)||(12151179-12151314)
chr1 (161-240)||(27721503-27721581)
chr1 (122-231)||(4659713-4659816)
chr1 (211-283)||(44426761-44426836)
chr1 (154-242)||(2137436-2137523)
chr1 (198-330)||(5179378-5179510)
chr1 (155-242)||(39887798-39887886)
chr1 (180-328)||(52429333-52429481)
chr1 (223-298)||(6365663-6365738)
chr1 (248-330)||(27687298-27687380)
chr1 (192-298)||(29074885-29074991)
chr1 (190-280)||(29778425-29778515)
chr1 (152-298)||(31154091-31154235)
chr1 (150-331)||(45331298-45331481)
chr1 (161-238)||(37539097-37539174)
chr1 (226-299)||(51028503-51028576)
chr1 (180-328)||(21909987-21910133)
chr1 (285-331)||(26252509-26252555)
chr1 (221-299)||(41121835-41121913)
chr1 (245-331)||(43500762-43500848)
chr1 (190-271)||(9412841-9412922)
chr1 (247-331)||(6267834-6267918)
chr1 (221-300)||(3312141-3312220)
chr1 (261-331)||(7439893-7439963)
chr1 (226-283)||(15057464-15057521)
chr1 (180-241)||(52837269-52837330)
chr1 (226-295)||(17988572-17988643)
chr1 (263-299)||(20564076-20564112)
chr1 (260-331)||(35367622-35367694)
chr1 (226-298)||(35538678-35538750)
[»] chr3 (65 HSPs)
chr3 (152-332)||(36460390-36460570)
chr3 (152-332)||(11632044-11632221)
chr3 (122-328)||(43253841-43254043)
chr3 (161-331)||(8679029-8679198)
chr3 (180-331)||(29023941-29024091)
chr3 (150-331)||(37695640-37695823)
chr3 (150-331)||(19822971-19823151)
chr3 (181-326)||(28690762-28690907)
chr3 (127-332)||(37311890-37312091)
chr3 (150-330)||(10366618-10366805)
chr3 (180-330)||(14194545-14194694)
chr3 (161-331)||(30190635-30190805)
chr3 (150-298)||(3901157-3901305)
chr3 (180-332)||(1778632-1778783)
chr3 (152-328)||(11905784-11905959)
chr3 (148-308)||(23004380-23004539)
chr3 (122-327)||(37772943-37773145)
chr3 (153-331)||(17652715-17652888)
chr3 (144-332)||(38137417-38137608)
chr3 (180-328)||(37497481-37497629)
chr3 (162-298)||(12904835-12904972)
chr3 (187-331)||(24569075-24569219)
chr3 (161-328)||(27471305-27471472)
chr3 (152-307)||(30711035-30711189)
chr3 (178-325)||(34750483-34750630)
chr3 (150-288)||(39043772-39043911)
chr3 (190-332)||(3313253-3313391)
chr3 (160-331)||(12736547-12736717)
chr3 (180-331)||(49830125-49830270)
chr3 (178-326)||(19611896-19612043)
chr3 (190-331)||(45710849-45710990)
chr3 (150-298)||(36476543-36476691)
chr3 (160-283)||(24245117-24245238)
chr3 (152-332)||(49447768-49447946)
chr3 (153-331)||(51837934-51838113)
chr3 (152-329)||(44301522-44301700)
chr3 (190-299)||(30682073-30682182)
chr3 (150-331)||(38795303-38795484)
chr3 (153-298)||(54726447-54726592)
chr3 (153-332)||(31158496-31158663)
chr3 (264-332)||(33491057-33491125)
chr3 (160-307)||(36462945-36463090)
chr3 (155-331)||(5322914-5323088)
chr3 (151-216)||(24703622-24703687)
chr3 (260-332)||(51064792-51064864)
chr3 (190-298)||(52290892-52291000)
chr3 (196-331)||(43719272-43719406)
chr3 (201-300)||(54477465-54477564)
chr3 (180-298)||(19609288-19609406)
chr3 (180-241)||(23068187-23068248)
chr3 (190-331)||(34957502-34957643)
chr3 (178-331)||(38512012-38512165)
chr3 (224-325)||(50035198-50035299)
chr3 (190-331)||(53560216-53560357)
chr3 (190-281)||(38705174-38705267)
chr3 (182-242)||(41351628-41351688)
chr3 (122-263)||(33491402-33491540)
chr3 (161-216)||(50036522-50036576)
chr3 (232-299)||(52206854-52206921)
chr3 (224-298)||(29595735-29595809)
chr3 (152-268)||(27549323-27549440)
chr3 (190-282)||(33459046-33459141)
chr3 (173-241)||(40194485-40194553)
chr3 (220-299)||(42278694-42278773)
chr3 (161-241)||(41038458-41038538)
[»] chr2 (52 HSPs)
chr2 (122-328)||(8947028-8947231)
chr2 (122-332)||(5789620-5789824)
chr2 (153-314)||(35313849-35314010)
chr2 (150-327)||(34120416-34120591)
chr2 (161-331)||(43115775-43115945)
chr2 (163-328)||(17695303-17695467)
chr2 (150-326)||(34225549-34225725)
chr2 (150-292)||(35242309-35242451)
chr2 (152-331)||(14523345-14523524)
chr2 (190-331)||(16805880-16806021)
chr2 (190-331)||(16845161-16845302)
chr2 (150-331)||(36354416-36354596)
chr2 (190-331)||(45235580-45235721)
chr2 (161-331)||(37322399-37322569)
chr2 (153-331)||(43410388-43410566)
chr2 (178-328)||(16377632-16377786)
chr2 (163-331)||(16463662-16463829)
chr2 (150-332)||(3323258-3323426)
chr2 (185-331)||(31448666-31448812)
chr2 (161-328)||(39691460-39691627)
chr2 (188-311)||(17346356-17346478)
chr2 (150-331)||(25637439-25637620)
chr2 (161-319)||(28170568-28170726)
chr2 (150-331)||(39785544-39785728)
chr2 (150-331)||(36794243-36794424)
chr2 (184-331)||(15359060-15359207)
chr2 (161-332)||(39329633-39329805)
chr2 (247-331)||(19937733-19937817)
chr2 (153-239)||(5272204-5272289)
chr2 (180-298)||(34451341-34451459)
chr2 (178-298)||(43699605-43699722)
chr2 (173-258)||(26863404-26863489)
chr2 (150-241)||(9458329-9458419)
chr2 (184-332)||(11742501-11742648)
chr2 (180-241)||(19937374-19937435)
chr2 (183-276)||(32831203-32831296)
chr2 (192-296)||(41220954-41221058)
chr2 (226-298)||(1206709-1206781)
chr2 (190-331)||(18853173-18853315)
chr2 (152-270)||(19444107-19444225)
chr2 (264-326)||(26607946-26608008)
chr2 (180-233)||(7494909-7494962)
chr2 (161-312)||(19426428-19426577)
chr2 (152-217)||(36173424-36173488)
chr2 (267-332)||(39443789-39443854)
chr2 (161-216)||(7438940-7438995)
chr2 (231-298)||(10005130-10005197)
chr2 (231-298)||(32783404-32783471)
chr2 (161-218)||(25904757-25904815)
chr2 (78-108)||(35313782-35313812)
chr2 (153-206)||(16028278-16028330)
chr2 (260-329)||(27501513-27501582)
[»] scaffold0159 (1 HSPs)
scaffold0159 (122-332)||(33993-34197)
[»] chr4 (82 HSPs)
chr4 (127-328)||(34360596-34360792)
chr4 (173-332)||(6643640-6643799)
chr4 (152-332)||(7061644-7061824)
chr4 (150-332)||(47464345-47464528)
chr4 (152-331)||(49428323-49428502)
chr4 (150-332)||(22130001-22130188)
chr4 (122-327)||(35311208-35311410)
chr4 (163-332)||(43237216-43237384)
chr4 (152-331)||(38405083-38405263)
chr4 (160-331)||(17237277-17237448)
chr4 (173-332)||(32884783-32884942)
chr4 (122-314)||(49746896-49747083)
chr4 (153-328)||(6609722-6609898)
chr4 (150-332)||(16821311-16821494)
chr4 (150-312)||(35380333-35380496)
chr4 (150-332)||(40122834-40123017)
chr4 (153-331)||(42616884-42617062)
chr4 (150-331)||(11907580-11907761)
chr4 (178-294)||(53412095-53412211)
chr4 (180-331)||(2066778-2066929)
chr4 (180-331)||(33790712-33790863)
chr4 (181-299)||(36985776-36985894)
chr4 (163-332)||(2942625-2942793)
chr4 (173-326)||(44536182-44536334)
chr4 (150-331)||(47773000-47773181)
chr4 (154-331)||(3689525-3689702)
chr4 (162-331)||(17114411-17114580)
chr4 (150-331)||(52859780-52859956)
chr4 (152-331)||(5841408-5841588)
chr4 (152-298)||(2653381-2653527)
chr4 (150-331)||(49175915-49176097)
chr4 (181-331)||(52247409-52247559)
chr4 (180-308)||(21240708-21240836)
chr4 (189-328)||(11288614-11288752)
chr4 (166-292)||(26147635-26147762)
chr4 (178-332)||(53346746-53346900)
chr4 (180-298)||(461947-462065)
chr4 (245-331)||(51625137-51625223)
chr4 (161-326)||(35998782-35998946)
chr4 (122-251)||(51624722-51624846)
chr4 (177-292)||(18741494-18741609)
chr4 (152-307)||(25233143-25233297)
chr4 (150-327)||(28500876-28501047)
chr4 (180-331)||(30682177-30682328)
chr4 (173-332)||(38663428-38663586)
chr4 (190-328)||(49579162-49579300)
chr4 (226-327)||(46396868-46396969)
chr4 (180-328)||(19265797-19265945)
chr4 (150-241)||(10754333-10754423)
chr4 (150-241)||(10968102-10968192)
chr4 (226-332)||(4972595-4972701)
chr4 (180-290)||(50264102-50264212)
chr4 (173-298)||(47358963-47359088)
chr4 (190-298)||(54506787-54506895)
chr4 (152-331)||(18532140-18532319)
chr4 (226-332)||(52869107-52869213)
chr4 (189-257)||(44526377-44526445)
chr4 (168-298)||(32469962-32470091)
chr4 (180-329)||(5618536-5618680)
chr4 (153-241)||(10672614-10672703)
chr4 (153-241)||(10886254-10886343)
chr4 (190-331)||(38502463-38502604)
chr4 (180-312)||(42517638-42517773)
chr4 (183-271)||(1038873-1038961)
chr4 (152-216)||(28911252-28911316)
chr4 (178-258)||(43902238-43902318)
chr4 (180-239)||(31370373-31370432)
chr4 (182-299)||(48914156-48914278)
chr4 (230-298)||(3098757-3098825)
chr4 (161-331)||(41711437-41711608)
chr4 (150-208)||(4972532-4972589)
chr4 (261-299)||(26885504-26885542)
chr4 (224-298)||(30192238-30192312)
chr4 (78-108)||(47464563-47464593)
chr4 (180-213)||(27880330-27880363)
chr4 (161-242)||(54202167-54202247)
chr4 (179-283)||(7986962-7987066)
chr4 (221-257)||(16506288-16506324)
chr4 (153-304)||(17512347-17512499)
chr4 (152-208)||(19627114-19627169)
chr4 (260-300)||(31257518-31257558)
chr4 (180-228)||(35251888-35251936)
[»] chr6 (45 HSPs)
chr6 (152-332)||(181517-181696)
chr6 (178-332)||(3720214-3720368)
chr6 (160-331)||(3291742-3291913)
chr6 (152-298)||(31894217-31894361)
chr6 (154-332)||(15058081-15058258)
chr6 (152-325)||(13909384-13909558)
chr6 (163-331)||(29363279-29363446)
chr6 (152-330)||(11655921-11656100)
chr6 (152-331)||(32440619-32440798)
chr6 (178-328)||(1781791-1781939)
chr6 (190-311)||(13087529-13087650)
chr6 (194-323)||(21804511-21804639)
chr6 (180-314)||(1225037-1225170)
chr6 (178-327)||(7920226-7920374)
chr6 (178-299)||(24983455-24983576)
chr6 (122-325)||(23142604-23142801)
chr6 (173-258)||(34657609-34657694)
chr6 (163-325)||(6834349-6834510)
chr6 (161-298)||(5302321-5302458)
chr6 (190-299)||(17828939-17829048)
chr6 (152-298)||(6801891-6802038)
chr6 (181-331)||(1063577-1063727)
chr6 (150-331)||(30716858-30717040)
chr6 (152-294)||(1955990-1956132)
chr6 (180-331)||(21010162-21010317)
chr6 (230-328)||(27448133-27448231)
chr6 (152-297)||(15582246-15582389)
chr6 (152-288)||(34299955-34300092)
chr6 (150-270)||(11143622-11143741)
chr6 (150-298)||(17835345-17835491)
chr6 (176-270)||(10923413-10923507)
chr6 (180-270)||(33510129-33510218)
chr6 (178-239)||(15046111-15046171)
chr6 (245-314)||(27367427-27367496)
chr6 (245-314)||(27457774-27457843)
chr6 (190-258)||(16205206-16205273)
chr6 (157-311)||(21018723-21018879)
chr6 (223-270)||(8695077-8695124)
chr6 (152-216)||(21425646-21425712)
chr6 (221-283)||(23397643-23397705)
chr6 (127-206)||(27367524-27367600)
chr6 (127-206)||(27457871-27457947)
chr6 (80-108)||(181454-181482)
chr6 (189-241)||(22398411-22398463)
chr6 (180-216)||(31283490-31283526)
[»] chr5 (46 HSPs)
chr5 (150-332)||(31655012-31655194)
chr5 (122-332)||(41496016-41496221)
chr5 (161-329)||(4818520-4818689)
chr5 (122-326)||(8698244-8698444)
chr5 (150-332)||(15818452-15818636)
chr5 (122-329)||(40530199-40530402)
chr5 (178-332)||(29570379-29570533)
chr5 (150-331)||(6753632-6753812)
chr5 (180-326)||(8724987-8725133)
chr5 (122-314)||(6615870-6616057)
chr5 (180-326)||(42803598-42803744)
chr5 (161-298)||(4440991-4441128)
chr5 (163-331)||(2232046-2232210)
chr5 (180-331)||(21060619-21060770)
chr5 (161-331)||(40899888-40900058)
chr5 (180-329)||(27542784-27542933)
chr5 (152-328)||(7827902-7828078)
chr5 (150-314)||(19929905-19930069)
chr5 (178-332)||(22848356-22848510)
chr5 (150-331)||(6315750-6315931)
chr5 (150-298)||(6753988-6754135)
chr5 (181-331)||(30512658-30512809)
chr5 (181-331)||(30552998-30553149)
chr5 (180-325)||(27580589-27580735)
chr5 (178-298)||(29374329-29374449)
chr5 (152-331)||(1248577-1248756)
chr5 (152-298)||(37184085-37184229)
chr5 (163-332)||(9515708-9515887)
chr5 (150-270)||(41062194-41062313)
chr5 (153-299)||(15439324-15439469)
chr5 (189-298)||(18841477-18841586)
chr5 (166-298)||(11796173-11796305)
chr5 (152-216)||(41478744-41478810)
chr5 (163-216)||(41480124-41480176)
chr5 (179-331)||(41478815-41478967)
chr5 (179-331)||(41492290-41492442)
chr5 (150-258)||(3348176-3348284)
chr5 (178-331)||(11904192-11904346)
chr5 (224-331)||(32440174-32440281)
chr5 (179-216)||(41492248-41492285)
chr5 (77-108)||(2232260-2232291)
chr5 (150-216)||(10598228-10598294)
chr5 (184-298)||(26285484-26285598)
chr5 (79-108)||(41495978-41496007)
chr5 (160-235)||(37101274-37101347)
chr5 (201-257)||(38161459-38161515)
[»] chr7 (65 HSPs)
chr7 (150-332)||(22738668-22738849)
chr7 (150-331)||(34947466-34947647)
chr7 (122-332)||(21350609-21350812)
chr7 (152-332)||(11373409-11373589)
chr7 (152-324)||(41506054-41506226)
chr7 (152-332)||(24516270-24516450)
chr7 (127-311)||(34100549-34100728)
chr7 (150-332)||(2459437-2459617)
chr7 (150-331)||(759073-759254)
chr7 (152-332)||(8592421-8592601)
chr7 (150-332)||(19271714-19271895)
chr7 (180-328)||(38391744-38391892)
chr7 (163-329)||(28103712-28103878)
chr7 (173-329)||(5524366-5524525)
chr7 (122-332)||(7463155-7463361)
chr7 (154-332)||(46478274-46478453)
chr7 (150-331)||(83350-83532)
chr7 (152-325)||(7457409-7457581)
chr7 (150-330)||(21390260-21390441)
chr7 (224-332)||(12631345-12631453)
chr7 (150-331)||(40076284-40076462)
chr7 (159-331)||(3178186-3178358)
chr7 (122-294)||(37245633-37245799)
chr7 (180-331)||(9785984-9786135)
chr7 (180-327)||(30865963-30866110)
chr7 (178-331)||(26974020-26974176)
chr7 (161-331)||(28202291-28202461)
chr7 (163-331)||(16904359-16904526)
chr7 (122-311)||(33819155-33819341)
chr7 (152-331)||(21759966-21760145)
chr7 (161-328)||(29835399-29835565)
chr7 (152-331)||(43873891-43874070)
chr7 (153-331)||(48608836-48609009)
chr7 (150-257)||(25571386-25571492)
chr7 (161-331)||(32018694-32018865)
chr7 (153-331)||(42935627-42935808)
chr7 (179-328)||(23670481-23670629)
chr7 (180-271)||(6494976-6495067)
chr7 (161-299)||(32018929-32019068)
chr7 (161-331)||(32346034-32346204)
chr7 (190-331)||(13961965-13962106)
chr7 (190-331)||(31930479-31930622)
chr7 (204-331)||(16560552-16560679)
chr7 (204-331)||(16604983-16605110)
chr7 (180-331)||(17828334-17828483)
chr7 (190-298)||(27920994-27921102)
chr7 (247-331)||(44180268-44180352)
chr7 (192-301)||(35333051-35333160)
chr7 (152-241)||(44424113-44424201)
chr7 (178-258)||(17610896-17610976)
chr7 (228-331)||(46211472-46211578)
chr7 (180-240)||(49101659-49101719)
chr7 (247-331)||(2850863-2850947)
chr7 (180-331)||(19060383-19060529)
chr7 (163-241)||(36790720-36790797)
chr7 (221-306)||(17783098-17783183)
chr7 (183-255)||(30546413-30546485)
chr7 (150-201)||(29835567-29835618)
chr7 (78-108)||(33819113-33819143)
chr7 (184-242)||(45724978-45725036)
chr7 (127-271)||(24166938-24167078)
chr7 (190-298)||(31665731-31665840)
chr7 (150-231)||(37490341-37490422)
chr7 (173-238)||(47045546-47045611)
chr7 (263-331)||(44424214-44424282)
[»] chr8 (59 HSPs)
chr8 (127-330)||(21216078-21216275)
chr8 (161-308)||(7172884-7173031)
chr8 (150-331)||(17719234-17719415)
chr8 (161-332)||(11976911-11977082)
chr8 (150-308)||(34948686-34948842)
chr8 (150-331)||(10179923-10180104)
chr8 (122-332)||(39482548-39482756)
chr8 (164-299)||(44761502-44761637)
chr8 (122-332)||(45425641-45425847)
chr8 (152-332)||(39405723-39405903)
chr8 (150-328)||(13335176-13335353)
chr8 (180-332)||(31082608-31082760)
chr8 (122-326)||(9300094-9300295)
chr8 (223-332)||(1875567-1875676)
chr8 (183-324)||(27294042-27294183)
chr8 (161-331)||(43719211-43719382)
chr8 (152-331)||(26626088-26626267)
chr8 (153-331)||(31270985-31271161)
chr8 (150-328)||(22771814-22771992)
chr8 (181-295)||(42886990-42887104)
chr8 (202-299)||(31331419-31331516)
chr8 (188-331)||(10097967-10098110)
chr8 (190-328)||(40996344-40996482)
chr8 (210-331)||(51132-51252)
chr8 (173-298)||(4428360-4428485)
chr8 (153-298)||(14854943-14855090)
chr8 (150-314)||(31231689-31231853)
chr8 (190-331)||(34393930-34394075)
chr8 (194-298)||(34057627-34057731)
chr8 (180-299)||(5053161-5053280)
chr8 (150-299)||(396619-396768)
chr8 (152-292)||(17823883-17824022)
chr8 (182-330)||(32476278-32476426)
chr8 (161-298)||(40028482-40028623)
chr8 (246-314)||(40109789-40109857)
chr8 (193-325)||(42972490-42972625)
chr8 (150-280)||(4924094-4924225)
chr8 (190-257)||(32678402-32678469)
chr8 (193-299)||(5356602-5356707)
chr8 (245-331)||(36967415-36967501)
chr8 (158-331)||(35504848-35505019)
chr8 (178-311)||(41091982-41092114)
chr8 (247-331)||(7703132-7703216)
chr8 (190-293)||(36006901-36007004)
chr8 (180-258)||(29226577-29226655)
chr8 (221-283)||(44648556-44648618)
chr8 (221-314)||(2767284-2767377)
chr8 (233-310)||(39890663-39890740)
chr8 (260-332)||(1739709-1739781)
chr8 (247-331)||(39300917-39301001)
chr8 (233-300)||(12559635-12559702)
chr8 (260-331)||(32678787-32678858)
chr8 (194-325)||(33765663-33765794)
chr8 (162-241)||(39301022-39301101)
chr8 (158-299)||(5878997-5879139)
chr8 (152-241)||(32631376-32631464)
chr8 (127-207)||(1875839-1875914)
chr8 (256-312)||(6611762-6611818)
chr8 (224-299)||(9839834-9839909)
[»] scaffold0095 (1 HSPs)
scaffold0095 (152-332)||(50165-50345)
[»] scaffold1809 (1 HSPs)
scaffold1809 (122-293)||(697-862)
[»] scaffold0018 (1 HSPs)
scaffold0018 (173-332)||(136011-136170)
[»] scaffold0583 (1 HSPs)
scaffold0583 (180-330)||(2014-2164)
[»] scaffold0294 (1 HSPs)
scaffold0294 (173-332)||(17017-17176)
[»] scaffold0328 (1 HSPs)
scaffold0328 (150-331)||(7956-8138)
[»] scaffold0302 (1 HSPs)
scaffold0302 (190-312)||(16097-16219)
[»] scaffold0330 (1 HSPs)
scaffold0330 (183-328)||(5382-5527)
[»] scaffold0012 (2 HSPs)
scaffold0012 (180-327)||(105673-105820)
scaffold0012 (75-108)||(105586-105619)
[»] scaffold0110 (1 HSPs)
scaffold0110 (180-331)||(1693-1844)
[»] scaffold0182 (1 HSPs)
scaffold0182 (180-298)||(20361-20479)
[»] scaffold0003 (3 HSPs)
scaffold0003 (230-328)||(39127-39225)
scaffold0003 (150-257)||(252854-252959)
scaffold0003 (260-331)||(252504-252575)
[»] scaffold0016 (1 HSPs)
scaffold0016 (152-216)||(76253-76317)
[»] scaffold1391 (1 HSPs)
scaffold1391 (226-325)||(1798-1897)
[»] scaffold0188 (1 HSPs)
scaffold0188 (194-299)||(6741-6845)
[»] scaffold0068 (1 HSPs)
scaffold0068 (189-238)||(56659-56708)
[»] scaffold0011 (1 HSPs)
scaffold0011 (178-298)||(14178-14296)
[»] scaffold0015 (1 HSPs)
scaffold0015 (183-299)||(42869-42985)
[»] scaffold0464 (1 HSPs)
scaffold0464 (260-331)||(6260-6331)
[»] scaffold0470 (1 HSPs)
scaffold0470 (256-312)||(1050-1106)
[»] scaffold0238 (1 HSPs)
scaffold0238 (268-331)||(3687-3750)


Alignment Details
Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 7 - 332
Target Start/End: Complemental strand, 44708048 - 44707737
Alignment:
Q  7 aatgacgcatgaccaccgtcatggtagtagacctatttggagggaaggtgcttgcagaagacacaattattcgtctcacaattattgtctctttaacatt 106  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||  |||||||||||||||||||||||||||||||||||    
T  44708048 aatgacgcatgaccaccgtcatggtggtagacctatttggaggaaaggtacttgcagaagaca--attattcgtctcacaattattgtctctttaacatt 44707951  T
Q  107 ttgnnnnnnnnnnnncaaagtaattgtcactttacaatgcaacaccaatgcaatatttattatttgtttcaactattatacctttatttattgaatttca 206  Q
    |||            |||||||||||||||||||||||||||           ||||||||||||||||| |||||||||||||||||||||||||||||    
T  44707950 ttgttttttctctt-caaagtaattgtcactttacaatgcaa-----------tatttattatttgtttccactattatacctttatttattgaatttca 44707863  T
Q  207 tccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataata 306  Q
    |||||||||| || | ||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  44707862 tccaacttaactgcttcactaactacaattaataaatgtgttttagtaaatactactaattttatcattgaaatcaatataattaatcatttctataata 44707763  T
Q  307 atcgtgcaaaaactttaaacgactaa 332  Q
    ||||||||||||||||||||||||||    
T  44707762 atcgtgcaaaaactttaaacgactaa 44707737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 122 - 331
Target Start/End: Original strand, 39864047 - 39864251
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgtt 221  Q
    |||| ||||||||||||||||||     | |||||||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |  |    
T  39864047 caaaataattgtcactttacaat-----atcaatgcaacatttattatttttttccactattatacccttatttattgaatttcatccaacttaactact 39864141  T
Q  222 ccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactt 321  Q
    ||||||||||||||||||||   | ||||||||||| ||||||||||||| ||||||||||| |||||||||||||||  ||||||||||||| ||||||    
T  39864142 ccactaactacaattaataagagtattttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcacaaactt 39864241  T
Q  322 taaacgacta 331  Q
    ||||||||||    
T  39864242 taaacgacta 39864251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 122 - 332
Target Start/End: Complemental strand, 24991836 - 24991630
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatatttattatttgtttca-actattatacctttatttattgaatttcatccaacttaattgt 220  Q
    |||| ||||||||||||||||||     || ||||||| ||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||| | |    
T  24991836 caaaataattgtcactttacaat-----actaatgcaacatttattatttttttcccactattatacctttatttattgaatttcatccaacttaactat 24991742  T
Q  221 tccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaact 320  Q
    ||||||||||||||||||||||  |||| |||||||||||| |||||||||  |||||||||| |||||||||||||||  ||||||||||| | ||||     
T  24991741 tccactaactacaattaataaaggtgttgtagtaaatactattaattttaccgttgaaatcaacacaattaatcatttccttaataatcgtgtacaaacc 24991642  T
Q  321 ttaaacgactaa 332  Q
    ||||||||||||    
T  24991641 ttaaacgactaa 24991630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 122 - 332
Target Start/End: Original strand, 12039018 - 12039223
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgtt 221  Q
    |||| ||||||||||||||||||     || ||||||| ||||||||||  |||| ||||||||||| |||||||||||||| |||||||||||| |  |    
T  12039018 caaaataattgtcactttacaat-----actaatgcaacatttattattattttccactattatacccttatttattgaattacatccaacttaaatact 12039112  T
Q  222 ccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactt 321  Q
    ||| ||||||||||||||||   ||| |||||||||  |||||||||||| ||||||||||| |||||||||||||||  ||||||||||||| |||| |    
T  12039113 ccattaactacaattaataagagtgtattagtaaatgttactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcacaaacct 12039212  T
Q  322 taaacgactaa 332  Q
    |||||||||||    
T  12039213 taaacgactaa 12039223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 160 - 332
Target Start/End: Original strand, 9307595 - 9307768
Alignment:
Q  160 tatttattatttgtttca-actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaata 258  Q
    |||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||| ||   |||||||||||||     
T  9307595 tatttattatttttttcccactattatacctttatttattgaatttcatccaacttaactactccactaactacaattaacaagggtgttttagtaaatg 9307694  T
Q  259 ctactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    ||| ||||||||  ||||||||||| ||| |||||||||||  ||||||||||| | |||| ||||||||||||    
T  9307695 ctattaattttatcattgaaatcaacacagttaatcatttccttaataatcgtgtacaaaccttaaacgactaa 9307768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 122 - 332
Target Start/End: Complemental strand, 23169173 - 23168970
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgtt 221  Q
    |||| ||||||||||||||||||     |||||||||| |||||||| ||  ||| ||||||||||  ||||||||||||||||| |  |||||| | ||    
T  23169173 caaaataattgtcactttacaat-----accaatgcaacatttattactt--ttccactattatactcttatttattgaatttcacctcacttaactatt 23169081  T
Q  222 ccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactt 321  Q
      |||||||| |||||||||  |||||||||||||| ||||||||||||| ||||||||||| ||||||||| ||||   ||||||||||||| ||||||    
T  23169080 taactaactataattaataaggatgttttagtaaatgctactaattttaccattgaaatcaacacaattaattattttcttaataatcgtgcacaaactt 23168981  T
Q  322 taaacgactaa 332  Q
    |||||||||||    
T  23168980 taaacgactaa 23168970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 152 - 331
Target Start/End: Original strand, 2572429 - 2572608
Alignment:
Q  152 caatgcaatatttatt-atttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttt 250  Q
    |||||||||||||||| |||| |||| | |||||||  ||||||||||||||||||| |||||||| |  ||||||||||||||||||||| | | |||     
T  2572429 caatgcaatatttatttatttttttccattattatatttttatttattgaatttcattcaacttaactactccactaactacaattaataattgtattt- 2572527  T
Q  251 agtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||||  || ||||||||| |||||||||||||||||||||||||  | |||||||||| || ||||||||||||||||    
T  2572528 agtaaatgatattaattttaccattgaaatcaatacaattaatcattattttaataatcgtacacaaactttaaacgacta 2572608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 152 - 314
Target Start/End: Original strand, 28748952 - 28749114
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||||||  ||||||||||| || | ||||||||||| ||||||||  |||||||||||||||||   ||| ||||| ||||||||||||   |||||||    
T  28748952 caatgcagcatttattattttttcccactattatacccttatttataaaatttcatccaacttaacaattctactaattacaattaataagggtgtttta 28749051  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgca 314  Q
    |||||| ||||||||||||| ||||||||||| |||||||||||||||  |||||||||||||    
T  28749052 gtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgca 28749114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 152 - 298
Target Start/End: Complemental strand, 8896490 - 8896343
Alignment:
Q  152 caatgcaatatttattatttgtttcaact-attatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttt 250  Q
    |||||||| ||||||||||| ||||   | ||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||| ||||    
T  8896490 caatgcaacatttattatttttttcccatgattatacctttatttattgaatttcatccaacttaaccactccactaactacaattaataaatatatttt 8896391  T
Q  251 agtaaatactactaattttactattgaaatcaatacaattaatcattt 298  Q
    |||||||  || ||||||||| ||||||||||| ||||| ||||||||    
T  8896390 agtaaatgatattaattttaccattgaaatcaacacaatcaatcattt 8896343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 161 - 314
Target Start/End: Original strand, 7759185 - 7759338
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatact 260  Q
    ||||||||||| |||| | ||||||||| |||||||||||||||||| |||||||| | ||||||||||||||||||||||   | |||||||||||  |    
T  7759185 atttattatttttttccattattatacccttatttattgaatttcattcaacttaactattccactaactacaattaataagagtattttagtaaatgat 7759284  T
Q  261 actaattttactattgaaatcaatacaattaatcatttctataataatcgtgca 314  Q
    | |||||| || ||||||||||| ||||||||| |||| | |||||||||||||    
T  7759285 attaatttcaccattgaaatcaacacaattaattatttttttaataatcgtgca 7759338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 180 - 331
Target Start/End: Complemental strand, 30755070 - 30754919
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||||||||||||||||||||||| ||||||| | || ||||||||| |||||||||  || |||||||||||| ||  ||||||||  || |||    
T  30755070 tattatacctttatttattgaatttcatctaacttaactatttcactaactataattaataatgatattttagtaaataatataaattttacccttaaaa 30754971  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||| |||||||||||||||  ||||||||||||| |||  |||||||||||    
T  30754970 tcaacacaattaatcatttccttaataatcgtgcataaatcttaaacgacta 30754919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 161 - 332
Target Start/End: Original strand, 31042767 - 31042938
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatact 260  Q
    ||||||||||| |||| ||||| ||| |||||||||||||||||||| ||||||||||  | ||||| |||||||||||||   | ||  |||||||  |    
T  31042767 atttattatttttttccactatgatatctttatttattgaatttcattcaacttaattacttcactacctacaattaataagggtattacagtaaatgat 31042866  T
Q  261 actaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    ||||||||||| ||||||||||| |||||||||||||||  |||||||| |||| |||| ||||| ||||||    
T  31042867 actaattttaccattgaaatcaacacaattaatcatttccttaataatcatgcacaaaccttaaatgactaa 31042938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 166 - 332
Target Start/End: Complemental strand, 6023792 - 6023626
Alignment:
Q  166 ttatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaa 265  Q
    |||||| |||| ||||||||||  | || |||||||||||||||||||||| |  |||| |||||||||||||||||  | ||||||||||  |||||||    
T  6023792 ttatttttttccactattatactctcatgtattgaatttcatccaacttaactactccaataactacaattaataaaggtattttagtaaaagctactaa 6023693  T
Q  266 ttttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
     ||||| ||||||||||| |||||||| ||||||  ||||||||| ||| |||| ||||||||||||    
T  6023692 atttaccattgaaatcaacacaattaaacatttccgtaataatcgcgcacaaacattaaacgactaa 6023626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 161 - 331
Target Start/End: Complemental strand, 16395193 - 16395025
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatact 260  Q
    ||||||||||| |||||  ||||||| | ||||||||||||||||||| ||||||| |  |||||||||||||||||| |||  | |||||||||||  |    
T  16395193 atttattatttttttcat-tattatatcattatttattgaatttcatctaacttaactactccactaactacaattaa-aaaggtattttagtaaatgat 16395096  T
Q  261 actaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||||||||  ||||||| ||||||||||||||   ||||||||||||| |||| |||||||||||    
T  16395095 actaattttactatcaaaatcaacacaattaatcattttcttaataatcgtgcataaaccttaaacgacta 16395025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 150 - 331
Target Start/End: Complemental strand, 20209999 - 20209818
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||  ||||||||||| || | | ||| ||||| |||||||||||| |||||||||||||| |  |||||||||||||||||||||  ||||||    
T  20209999 accaatgcagcatttattattttttcccattataatacccttatttattgaacttcatccaacttaactactccactaactacaattaataaggatgttt 20209900  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||  |||||||||||||||  ||||||| | ||||||||||||   ||||||  |||||  | |||||||||||||    
T  20209899 tagtaaatgatactaattttactatcaaaatcaacataattaatcattttcttaataacggtgcatcacctttaaacgacta 20209818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 152 - 328
Target Start/End: Original strand, 37506085 - 37506264
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||||||| ||||||||||| |||| | ||| ||||| |||||||||||||||||| |||||||| |  ||||||||||||||||||||||  |||||||    
T  37506085 caatgcaacatttattatttttttccattataatacccttatttattgaatttcattcaacttaactactccactaactacaattaataaaagtgtttta 37506184  T
Q  252 gtaa---atactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacga 328  Q
    ||||   ||| |||||||||||  ||  ||||||| |||||||||||||||  |||||| ||||||  ||| ||||||||    
T  37506185 gtaaatgatagtactaattttatcatcaaaatcaacacaattaatcatttccttaataaccgtgcatcaaccttaaacga 37506264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 161 - 329
Target Start/End: Original strand, 26093364 - 26093532
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatact 260  Q
    ||||||||| | |||| | ||||||||| |||||||||||| |||||| |||||||||  | |||||||||||||||||||  || ||||| |||||  |    
T  26093364 atttattatatttttccattattatacccttatttattgaacttcatctaacttaattacttcactaactacaattaataaggatattttaataaatgat 26093463  T
Q  261 actaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgac 329  Q
    | ||||||||| ||||||||||| ||||||||||||||   ||||||||||||| |||  |||||||||    
T  26093464 attaattttaccattgaaatcaacacaattaatcattttcttaataatcgtgcacaaatcttaaacgac 26093532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 161 - 331
Target Start/End: Complemental strand, 33733410 - 33733241
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatact 260  Q
    ||||||||||  |||| | ||||||||| |||||||||||||||||| | || |||    || |||||||||||||||||||  | |||||||||||  |    
T  33733410 atttattattcttttccattattatacccttatttattgaatttcattctacctaaccactctactaactacaattaataaaagtattttagtaaatgtt 33733311  T
Q  261 actaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    | ||||||||| ||||||||||| |||| ||||||||||  ||||||||||||| ||||||||||||||||    
T  33733310 aataattttaccattgaaatcaacacaa-taatcatttccttaataatcgtgcacaaactttaaacgacta 33733241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 180 - 314
Target Start/End: Original strand, 37276450 - 37276584
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||| |||||||||||||||||||||| |||| | ||||||||||||||||||||||   ||||||||||||   |||||||||||| ||  |||    
T  37276450 tattatacccttatttattgaatttcatccaatttaactattccactaactacaattaataagggtgttttagtaaacgatactaattttaccatcaaaa 37276549  T
Q  280 tcaatacaattaatcatttctataataatcgtgca 314  Q
    |||| ||| |||||||||||  |||||||||||||    
T  37276550 tcaacacagttaatcatttccttaataatcgtgca 37276584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 153 - 298
Target Start/End: Complemental strand, 49224142 - 49223997
Alignment:
Q  153 aatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttag 252  Q
    ||||||| ||||||||||| |||  | ||| ||||| |||||||||||| |||||||||||||| |  |||||||||||||||||||||   ||||||||    
T  49224142 aatgcaacatttattattttttttcattataatacccttatttattgaacttcatccaacttaactactccactaactacaattaataagggtgttttag 49224043  T
Q  253 taaatactactaattttactattgaaatcaatacaattaatcattt 298  Q
    |||||  |||||||||||| ||  ||||||| ||||||||||||||    
T  49224042 taaatgatactaattttaccatcaaaatcaacacaattaatcattt 49223997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 180 - 331
Target Start/End: Original strand, 38787330 - 38787481
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||| |||||||||||||||||||||| |||| |  ||||||||||| |||||||||  ||||||| | ||||  ||||| |||||| ||  |||    
T  38787330 tattatacccttatttattgaatttcatccaatttaactactccactaactataattaataaggatgttttggcaaatgatactagttttaccatcaaaa 38787429  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||| ||||| |||||||||  ||||||||||||| |||| |||||||||||    
T  38787430 tcaacacaatcaatcatttccttaataatcgtgcataaaccttaaacgacta 38787481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 166 - 331
Target Start/End: Original strand, 916999 - 917164
Alignment:
Q  166 ttatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaa 265  Q
    |||||| |||| | |||| |||| ||||||||| |||||||| |||||||| |  || ||||||||||||||||||   | |||||||||||  || |||    
T  916999 ttatttttttccattattttacccttatttattaaatttcatgcaacttaactaatctactaactacaattaataagggtattttagtaaatgatattaa 917098  T
Q  266 ttttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||| ||| ||||||| | |||||||||||| | ||||||||||||| |||| |||||||||||    
T  917099 ttttaccatttaaatcaacataattaatcatttatttaataatcgtgcacaaaccttaaacgacta 917164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 152 - 314
Target Start/End: Original strand, 9379193 - 9379355
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttcc-actaactacaattaataaatatgtttt 250  Q
    ||||||||||||||||  || |||| | |||||||||| |||||||| ||||||||| ||||||| |  ||| |||||||||||||||||||||| ||||    
T  9379193 caatgcaatatttatttatt-tttccattattatacctatatttattaaatttcatcaaacttaactactcccactaactacaattaataaatatatttt 9379291  T
Q  251 agtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgca 314  Q
    | |||||  || ||||||||  ||| |||||| ||||||||||||||||| ||| ||| |||||    
T  9379292 aataaatgatattaattttatcattaaaatcattacaattaatcatttctttaaaaattgtgca 9379355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 180 - 298
Target Start/End: Complemental strand, 6160588 - 6160470
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||| || ||||||||||| ||| |||||||| | ||||| ||||||||||||||||   | |||||||||||| |||||||||||  |||||||    
T  6160588 tattatacccttgtttattgaattacattcaacttaactattccattaactacaattaataagagtattttagtaaataatactaattttatcattgaaa 6160489  T
Q  280 tcaatacaattaatcattt 298  Q
    |||| ||||||||||||||    
T  6160488 tcaacacaattaatcattt 6160470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 152 - 298
Target Start/End: Complemental strand, 40145004 - 40144858
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||||||| ||||||||||| || | | ||| ||||| |||||||||||| |||||||||||||| |  |||| ||||||||||||||||   |||||||    
T  40145004 caatgcaacatttattattttttcccattataatacccttatttattgaacttcatccaacttaactactccattaactacaattaataagggtgtttta 40144905  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcattt 298  Q
    ||||||  || ||||||||| ||  ||||||| ||||||||||||||    
T  40144904 gtaaatgatattaattttaccatcaaaatcaacacaattaatcattt 40144858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 6785192 - 6785304
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgtt 221  Q
    |||| ||||||||||||||||||     ||| |||||| ||||||||||| |||| ||||||||||| ||||||||||||||||||| ||||||| |  |    
T  6785192 caaaataattgtcactttacaat-----acctatgcaacatttattatttttttccactattatacccttatttattgaatttcatcaaacttaactact 6785286  T
Q  222 ccactaactacaattaat 239  Q
    ||||||||||||||||||    
T  6785287 ccactaactacaattaat 6785304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 179 - 300
Target Start/End: Complemental strand, 26258070 - 26257949
Alignment:
Q  179 ctattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaa 278  Q
    |||||||||| ||||||| ||  ||||||||||||||||| ||| |||||| || |||||||||  | |||||||||||  || | ||||| ||||||||    
T  26258070 ctattatacccttatttactggttttcatccaacttaattattctactaaccacgattaataaaggtattttagtaaatgataatcattttgctattgaa 26257971  T
Q  279 atcaatacaattaatcatttct 300  Q
    ||||||||||||||||||||||    
T  26257970 atcaatacaattaatcatttct 26257949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 161 - 293
Target Start/End: Complemental strand, 14757742 - 14757610
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatact 260  Q
    |||||| |||| |||| ||||||||||| ||||||||| ||||||||| ||||||| |  | |||||||||||||||||||   |||||||||||||  |    
T  14757742 atttataatttttttccactattatacccttatttattaaatttcatcgaacttaactacttcactaactacaattaataagagtgttttagtaaatgtt 14757643  T
Q  261 actaattttactattgaaatcaatacaattaat 293  Q
    ||||||||||   |||||||||| |||||||||    
T  14757642 actaattttatcgttgaaatcaacacaattaat 14757610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 331
Target Start/End: Complemental strand, 31978781 - 31978630
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||| ||||||| ||||||| || |||||||| |  |||| |||||| |||||||||  ||  |||||||| |  || ||||||||| |||||||    
T  31978781 tattatacccttatttaatgaatttaattcaacttaactactccattaactataattaataagaatagtttagtaagtgatattaattttaccattgaaa 31978682  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||| |||||||||| |||   ||||||||||||| ||||||||||||||||    
T  31978681 tcaacacaattaatctttttcttaataatcgtgcacaaactttaaacgacta 31978630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 299
Target Start/End: Original strand, 36701910 - 36702029
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||  ||||||||||||||||||| |||||||   ||||||||||||||||||||||     |||||||||||  |||||||||||| |||||||    
T  36701910 tattatactcttatttattgaatttcatcaaacttaacgattccactaactacaattaataagggcattttagtaaatgatactaattttaccattgaaa 36702009  T
Q  280 tcaatacaattaatcatttc 299  Q
    |||| | |||||||||||||    
T  36702010 tcaacataattaatcatttc 36702029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 299
Target Start/End: Original strand, 36718014 - 36718133
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||  ||||||||||||||||||| |||||||   ||||||||||||||||||||||     |||||||||||  |||||||||||| |||||||    
T  36718014 tattatactcttatttattgaatttcatcaaacttaacgattccactaactacaattaataagggcattttagtaaatgatactaattttaccattgaaa 36718113  T
Q  280 tcaatacaattaatcatttc 299  Q
    |||| | |||||||||||||    
T  36718114 tcaacataattaatcatttc 36718133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 180 - 326
Target Start/End: Original strand, 10495828 - 10495973
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    |||||||  |||||||||||||||||||||||||||| |  |||||||| |||||||||||||  |||||||||||||  |||||||||||| ||  |||    
T  10495828 tattatatatttatttattgaatttcatccaacttaactactccactaattacaattaataaa-gtgttttagtaaatgatactaattttaccatcaaaa 10495926  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaac 326  Q
    |||| | ||||||| |||| | |||||||| | || |||| ||||||    
T  10495927 tcaacaaaattaataatttttttaataatcttacataaaccttaaac 10495973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 184 - 298
Target Start/End: Original strand, 15699115 - 15699229
Alignment:
Q  184 atacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaa 283  Q
    ||||| |||||||||||| |||||||||||||| |  |||||||||||||||||||||   |||||||||||||  || ||||||||| ||  |||||||    
T  15699115 atacccttatttattgaacttcatccaacttaactactccactaactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaa 15699214  T
Q  284 tacaattaatcattt 298  Q
     ||||||||||||||    
T  15699215 cacaattaatcattt 15699229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 331
Target Start/End: Complemental strand, 32826152 - 32825970
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttcc---actaactacaattaataaatatg 246  Q
    |||||| ||| ||||||||||| |||| | ||| ||||| |||||||||||| |||||||||||||| |  |||   ||||| |||||||||||||  ||    
T  32826152 accaatacaacatttattattt-tttccattataatacccttatttattgaacttcatccaacttaactactcctccactaattacaattaataaaggtg 32826054  T
Q  247 ttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||||||||  |||||||||||| ||  ||||||| || ||||||||||||  |||||| ||||||  ||| |||||||||||    
T  32826053 ttttagtaaatgatactaattttaccatcaaaatcaacac-attaatcatttccttaataaccgtgcatcaaccttaaacgacta 32825970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 326
Target Start/End: Complemental strand, 34031684 - 34031510
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||||||  ||||||||| | |||| | ||||||||  |||||||||||||||||| |||| | | | || |||||||||||||||||||   | |||||    
T  34031684 caatgcagcatttattatgtttttccattattatactcttatttattgaatttcattcaaccttactattacactaactacaattaataacggtatttta 34031585  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaac 326  Q
    ||||||  || ||||||||| |||| |||||| |||| ||||||||||  |||||||| |||| |||| ||||||    
T  34031584 gtaaatgatattaattttaccattggaatcaacacaagtaatcatttccttaataatcatgcacaaaccttaaac 34031510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 180 - 331
Target Start/End: Original strand, 11449875 - 11450023
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||||| |||||||||||||||||||| || | |  || | |||||||||||||||||| |||| ||| ||||  || ||||||||| |||||||    
T  11449875 tattatacctt-atttattgaatttcatccaattttactactctattaactacaattaataaatgtgttatagaaaat--tattaattttaccattgaaa 11449971  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||| | |||||| ||||||  ||||||||||||| |||| |||||| ||||    
T  11449972 tcaacataattaaccatttccttaataatcgtgcacaaaccttaaacaacta 11450023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 180 - 328
Target Start/End: Complemental strand, 44761660 - 44761512
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||| |||||||||||||||||| ||||||||   |||||||||||| |||||||||| || |||||||||||  || ||||||||  ||| |||    
T  44761660 tattatacccttatttattgaatttcattcaacttaaccattccactaactataattaataaagatattttagtaaatgatattaattttatcattaaaa 44761561  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacga 328  Q
    | || | |||||||||||| | || ||||| | || ||||| |||||||    
T  44761560 ttaacataattaatcatttttttattaatcatacacaaactctaaacga 44761512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 154 - 325
Target Start/End: Complemental strand, 13579775 - 13579605
Alignment:
Q  154 atgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagt 253  Q
    |||||||||||||||||  ||| |  ||||||||| ||||||||||||||||||| ||||||| |  ||||||||||||||||||||    |||||| ||    
T  13579775 atgcaatatttattattatttttat-tattatacccttatttattgaatttcatcaaacttaaatactccactaactacaattaatatgggtgtttttgt 13579677  T
Q  254 aaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaa 325  Q
    ||||  || |||| ||   ||  ||||||| |||||||||||||||| |||||||| |||| |||| |||||    
T  13579676 aaatgatattaatattgtcatcaaaatcaacacaattaatcatttctttaataatcatgcataaaccttaaa 13579605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 164 - 283
Target Start/End: Original strand, 27896928 - 27897047
Alignment:
Q  164 tattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactact 263  Q
    |||||||| |||| ||||||||||||||||||||| |||||||||||||| ||||  ||||||||||| |||||||||  || ||||  |||||  ||||    
T  27896928 tattatttttttcgactattatacctttatttattaaatttcatccaactaaattactccactaactataattaataagaatattttgataaattatact 27897027  T
Q  264 aattttactattgaaatcaa 283  Q
    |||||||  ||| |||||||    
T  27897028 aattttatcattaaaatcaa 27897047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 122 - 257
Target Start/End: Original strand, 35367738 - 35367868
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgtt 221  Q
    |||| ||||||||||||||||||     ||||||| || |||||||| |  |||  ||||||||||| ||||||||||||||||||| ||||||| |  |    
T  35367738 caaaataattgtcactttacaat-----accaatgaaacatttattagtctttttcactattatacccttatttattgaatttcatctaacttaactact 35367832  T
Q  222 ccactaactacaattaataaatatgttttagtaaat 257  Q
    ||||||||||||||||||||   |||||||||||||    
T  35367833 ccactaactacaattaataagggtgttttagtaaat 35367868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 152 - 331
Target Start/End: Original strand, 42409956 - 42410134
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||||||  ||||||||||| |||||  ||| ||| |||||||||||||| ||||||| |||||| | | | ||||||||||||||||||   || ||||    
T  42409956 caatgcagcatttattatttttttcat-tataatatctttatttattgaacttcatcctacttaactatccaactaactacaattaataagggtgcttta 42410054  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||  || ||||||||| ||  ||||||| |||||||||||||| | |||||| ||||||  ||| |||||| ||||    
T  42410055 gtaaatgatattaattttaccatcaaaatcaacacaattaatcatttttttaataaccgtgcatcaaccttaaacaacta 42410134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 298
Target Start/End: Complemental strand, 4441732 - 4441614
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||||||||||||| ||||||||| || ||||||  |||||||||||||||||| ||   |||||||||||| || | ||||||||| ||| |||    
T  4441732 tattatacctttatttattaaatttcatctaatttaattactccactaactacaattaacaagggtgttttagtaaagacgattaattttaccattaaaa 4441633  T
Q  280 tcaatacaattaatcattt 298  Q
    |||  ||||||||| ||||    
T  4441632 tcaccacaattaattattt 4441614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 35682950 - 35682887
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaa 216  Q
    |||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||    
T  35682950 caatgcaatatttattattt-tttccactattatacccttatttattgaatttcatccaacttaa 35682887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 300
Target Start/End: Original strand, 3260558 - 3260695
Alignment:
Q  157 caatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaa 256  Q
    |||||||||||||||||| | |||||||||   ||||||||| ||||||||| ||||||| |  |||||||||||||||||||||       |||||||     
T  3260558 caatatttattatttgtt-ctactattataaacttatttattcaatttcatcaaacttaacttctccactaactacaattaataa-----ggttagtaat 3260651  T
Q  257 tactactaattttactattgaaatcaatacaattaatcatttct 300  Q
    || ||||| ||||| |||||||||||| |||| |||||||||||    
T  3260652 taatactacttttattattgaaatcaacacaactaatcatttct 3260695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 239
Target Start/End: Complemental strand, 22856394 - 22856307
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaat 239  Q
    |||| ||| ||||||||||| |||  |||||||||| |||||||||||||||||||||| ||||| |  |||||||||||||||||||    
T  22856394 caattcaacatttattatttttttgcactattatacttttatttattgaatttcatccagcttaactactccactaactacaattaat 22856307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 180 - 290
Target Start/End: Original strand, 7351625 - 7351735
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||  |||||||||||||||  |||||||||||| |||||||||||| |||||||||   | |||||||||||| || ||||||||  ||| |||    
T  7351625 tattatactcttatttattgaattttgtccaacttaattattccactaactagaattaataaggttattttagtaaataatattaattttatcattaaaa 7351724  T
Q  280 tcaatacaatt 290  Q
    |||| ||||||    
T  7351725 tcaacacaatt 7351735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 193 - 311
Target Start/End: Complemental strand, 32970683 - 32970565
Alignment:
Q  193 tttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaa 292  Q
    |||||||||||| ||||||||||||| ||  |||||| ||||||||||    | |||||||||||| || ||||||||  ||||||||||| ||||||||    
T  32970683 tttattgaattttatccaacttaattattttactaacaacaattaatacgagtattttagtaaataatattaattttatcattgaaatcaacacaattaa 32970584  T
Q  293 tcatttctataataatcgt 311  Q
    ||||||   ||||||||||    
T  32970583 tcattttcttaataatcgt 32970565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 308
Target Start/End: Original strand, 24880874 - 24880993
Alignment:
Q  192 atttattgaatttcatccaacttaat---tgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaa 288  Q
    |||||||||||||||||||||||| |   |  ||||||||||||||||||||||  | |||||||||||  || ||||||||| ||||||||||| | ||    
T  24880874 atttattgaatttcatccaacttactaactactccactaactacaattaataaaagtattttagtaaatgatattaattttaccattgaaatcaacataa 24880973  T
Q  289 ttaatcatttctataataat 308  Q
    | |||||||||  |||||||    
T  24880974 tcaatcatttccgtaataat 24880993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 331
Target Start/End: Original strand, 41080587 - 41080738
Alignment:
Q  178 actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattga 277  Q
    ||||| |||||||||||||||||||| |||||||||||  | | ||||||| ||||||||||||| || ||| | |||||  ||  |||||||||||| |    
T  41080587 actatcatacctttatttattgaatt-catccaacttacctct-ccactaattacaattaataaagatatttcaataaatgatataaattttactattaa 41080684  T
Q  278 aatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||| |||||||||||||| | ||| | || |||| |||| |||| ||||||    
T  41080685 aatcaacacaattaatcatttttttaaaattcatgcataaaccttaatcgacta 41080738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 258
Target Start/End: Complemental strand, 25089212 - 25089136
Alignment:
Q  183 tatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaa-tatgttttagtaaata 258  Q
    |||||| ||||||||||||||||||||||||||| |  | ||||||||||||||||||||  |||||||||||||||    
T  25089212 tatacccttatttattgaatttcatccaacttaactacttcactaactacaattaataaaggatgttttagtaaata 25089136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 194 - 329
Target Start/End: Original strand, 12151179 - 12151314
Alignment:
Q  194 ttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaat 293  Q
    |||| ||||| || ||||||||| || ||||||||||||||||||| |  || |||||||||||  |||||||||||  ||||||||||| | |||||||    
T  12151179 ttatagaattccacccaacttaactgctccactaactacaattaattacaatattttagtaaatgatactaattttatcattgaaatcaacataattaat 12151278  T
Q  294 catttctataataatcgtgcaaaaactttaaacgac 329  Q
     || ||  |||||||| | || |||| |||||||||    
T  12151279 aatctccttaataatcatacacaaaccttaaacgac 12151314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 161 - 240
Target Start/End: Original strand, 27721503 - 27721581
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaata 240  Q
    ||||||||||| |||| |||||||||| |||||||||||||||| |||||| |||| | ||| |||||||||||||||||    
T  27721503 atttattattt-tttccactattatacttttatttattgaattttatccaatttaactattctactaactacaattaata 27721581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 4659713 - 4659816
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgtt 221  Q
    |||| ||||||||||||||||||     |||||||||| |||  |||||| |||| ||||||||| | |||||||||||||||||| ||||||||||  |    
T  4659713 caaaataattgtcactttacaat-----accaatgcaacattatttattt-tttccactattatatccttatttattgaatttcattcaacttaattact 4659806  T
Q  222 ccactaacta 231  Q
    ||||||||||    
T  4659807 ccactaacta 4659816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 44426836 - 44426761
Alignment:
Q  211 acttaattgttccactaactacaattaataaatatgttttagtaa---atactactaattttactattgaaatcaa 283  Q
    ||||||||| |||||||| ||||||||||||| ||||||||||||   ||||||| |||||||| |||||||||||    
T  44426836 acttaattgctccactaattacaattaataaagatgttttagtaaatgatactacaaattttaccattgaaatcaa 44426761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 2137523 - 2137436
Alignment:
Q  154 atgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaa 242  Q
    |||||| ||||||||||| |||||  ||||||| ||||||||||||||||| ||||||||||| |  |||| |||| ||||||||||||    
T  2137523 atgcaacatttattatttttttcat-tattatatctttatttattgaattttatccaacttaaatactccaataacaacaattaataaa 2137436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 330
Target Start/End: Complemental strand, 5179510 - 5179378
Alignment:
Q  198 tgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatt 297  Q
    |||||||||||||| |||  |  ||||||||||||||||||||   |   ||||||||||  |||| ||||| ||||||||||||| |||||||||||||    
T  5179510 tgaatttcatccaatttatctactccactaactacaattaatatgaaaactttagtaaatgatactcattttgctattgaaatcaacacaattaatcatt 5179411  T
Q  298 tctataataatcgtgcaaaaactttaaacgact 330  Q
    |   ||| ||||||| | |||| ||||||||||    
T  5179410 ttgttaagaatcgtgtacaaaccttaaacgact 5179378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 242
Target Start/End: Original strand, 39887798 - 39887886
Alignment:
Q  155 tgcaatatttattatttgtttca-actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaa 242  Q
    |||||||||| |||||| ||||  ||| |||||| |||||||||||||||||||| |||||||||  || ||||||||| |||||||||    
T  39887798 tgcaatatttgttatttttttctcactgttatacatttatttattgaatttcatcaaacttaattactcaactaactactattaataaa 39887886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 328
Target Start/End: Original strand, 52429333 - 52429481
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||| ||||||| |||||||||| |||||||| |  |||||||||||||||||||||   | ||||| |||||   | ||| ||||| || | ||    
T  52429333 tattatacccttatttaatgaatttcattcaacttaactactccactaactacaattaataagggtattttaataaatgacattaaatttaccatcgtaa 52429432  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacga 328  Q
    ||||   |||||||||||||  | ||||||||||| |||| ||||||||    
T  52429433 tcaaccaaattaatcatttccttcataatcgtgcacaaaccttaaacga 52429481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 298
Target Start/End: Original strand, 6365663 - 6365738
Alignment:
Q  223 cactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcattt 298  Q
    |||||||||||||||| ||  || ||||| |||||| ||||||||| | |||||||||||| ||||||||||||||    
T  6365663 cactaactacaattaacaatgatattttaataaataatactaatttgattattgaaatcaacacaattaatcattt 6365738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 248 - 330
Target Start/End: Original strand, 27687298 - 27687380
Alignment:
Q  248 tttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgact 330  Q
    ||||||||||| || ||||||||| ||||||||||| |||| ||||||||| | ||||||| ||||| |||| ||||| ||||    
T  27687298 tttagtaaataatattaattttaccattgaaatcaacacaactaatcatttttttaataattgtgcacaaaccttaaaagact 27687380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 298
Target Start/End: Original strand, 29074885 - 29074991
Alignment:
Q  192 atttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaatta 291  Q
    ||||||||||||||||||||||||| | || |  |||| ||||||||||   |||||||| |||||  || ||||||||| ||| ||||||| |||| ||    
T  29074885 atttattgaatttcatccaacttaactattacgttaacaacaattaatatggatgttttaataaatgatattaattttaccattaaaatcaacacaacta 29074984  T
Q  292 atcattt 298  Q
    |||||||    
T  29074985 atcattt 29074991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 29778515 - 29778425
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaat 280  Q
    ||||||||||||||| ||||||||||  |  |  ||||||||||||||||||  || |||||||||||  |||||||||||| ||||||||    
T  29778515 ttatttattgaattttatccaacttaggttcttaactaactacaattaataatgatattttagtaaatgatactaattttaccattgaaat 29778425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 152 - 298
Target Start/End: Original strand, 31154091 - 31154235
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||||||| ||| ||||||| |||||| || |||||  ||||||| ||||||||||| |||||||    || || |||||||||||||||||    ||||    
T  31154091 caatgcaacattaattattt-tttcaa-tactatacacttatttactgaatttcatcaaacttaagcactctaccaactacaattaataaatgcaattta 31154188  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcattt 298  Q
    ||| ||| |||||||||||  ||| ||||||| ||||||||||||||    
T  31154189 gtagataatactaattttatcattaaaatcaacacaattaatcattt 31154235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 150 - 331
Target Start/End: Original strand, 45331298 - 45331481
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccac---taactacaattaataaatatg 246  Q
    |||||||||| ||||||||||| |||| | |||  |||| | |||||||||| |||||||||||||| | |||| |   ||||||||||||||||   ||    
T  45331298 accaatgcaacatttattattt-tttccattatattaccctaatttattgaacttcatccaacttaactattcctccattaactacaattaataagggtg 45331396  T
Q  247 ttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||||||||  || ||||||||| ||  ||||||| | ||||||| ||||   |||||| |||||   ||| |||||||||||    
T  45331397 ttttagtaaatgatattaattttaccatcaaaatcaacataattaattattttcttaataaccgtgcgtcaaccttaaacgacta 45331481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 238
Target Start/End: Original strand, 37539097 - 37539174
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaa 238  Q
    |||||| |||| |||| ||||| ||||| ||||||||||||||||||| ||||||| |  || |||||||||||||||    
T  37539097 atttataatttttttccactatgatacccttatttattgaatttcatcaaacttaactactctactaactacaattaa 37539174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 299
Target Start/End: Complemental strand, 51028576 - 51028503
Alignment:
Q  226 taactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttc 299  Q
    ||||||||||||||||| || ||||| ||||| ||||||| |||| |||| ||||||| |||||||||| ||||    
T  51028576 taactacaattaataaaaatattttaataaatgctactaactttattattaaaatcaacacaattaatcgtttc 51028503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 328
Target Start/End: Complemental strand, 21910133 - 21909987
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||||| |||||||||||| |||| ||||||| |  ||| | ||||| | |||||||   |||||||| |||   |||||||||||| ||  |||    
T  21910133 tattatacctt-atttattgaattccatcaaacttaactactcctcaaactatagttaataagg-tgttttagcaaacgatactaattttaccatcaaaa 21910036  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacga 328  Q
    |||| |||||||||||||||  ||||||| ||||| |||| ||||||||    
T  21910035 tcaacacaattaatcatttccttaataattgtgcataaaccttaaacga 21909987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 26252555 - 26252509
Alignment:
Q  285 acaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||||||||||| | |||||||| |||||||||||||||||||||    
T  26252555 acaattaatcatttttttaataatcatgcaaaaactttaaacgacta 26252509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 299
Target Start/End: Complemental strand, 41121913 - 41121835
Alignment:
Q  221 tccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttc 299  Q
    |||||||||||||||||||||   | |||||||||||  | |||||||||| ||  ||||||| |||||||||||||||    
T  41121913 tccactaactacaattaataagggtattttagtaaattatgctaattttaccatcaaaatcaacacaattaatcatttc 41121835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 331
Target Start/End: Complemental strand, 43500848 - 43500762
Alignment:
Q  245 tgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||||||||||   ||||||| ||| ||  ||||||| ||||||||| |||||  ||||||||||||| |||| |||||||||||    
T  43500848 tgttttagtaaatgaaactaattataccatcaaaatcaacacaattaataatttccttaataatcgtgcataaaccttaaacgacta 43500762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 271
Target Start/End: Complemental strand, 9412922 - 9412841
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttac 271  Q
    |||||||||||||||||||||||  || | ||||| |||||||||||||| |  || ||||| ||||| || ||||||||||    
T  9412922 ttatttattgaatttcatccaacccaactattccattaactacaattaatcagaatattttattaaatgcttctaattttac 9412841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 331
Target Start/End: Complemental strand, 6267918 - 6267834
Alignment:
Q  247 ttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||||| ||  ||||| |||||  ||| ||||||| |||||||||||||||| ||| ||| ||||| |||| |||||||||||    
T  6267918 ttttagtacatgatactagttttatcattaaaatcaacacaattaatcatttctttaaaaatagtgcacaaaccttaaacgacta 6267834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 300
Target Start/End: Original strand, 3312141 - 3312220
Alignment:
Q  221 tccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttct 300  Q
    ||||||||||||||||||||   || || ||||||||  ||||||||| |  ||| ||||||| ||||||||||||||||    
T  3312141 tccactaactacaattaatatcaatattatagtaaatgatactaatttaatcattaaaatcaacacaattaatcatttct 3312220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 331
Target Start/End: Complemental strand, 7439963 - 7439893
Alignment:
Q  261 actaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||||| ||||||||  | ||  |||||||||| | ||| |||||||||||||| |||||||||||    
T  7439963 actaattttaccattgaaattgacacggttaatcatttttctaaaaatcgtgcaaaaaccttaaacgacta 7439893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 283
Target Start/End: Original strand, 15057464 - 15057521
Alignment:
Q  226 taactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaa 283  Q
    |||||| |||||||||| |||||||| || ||  |||||||||||||||| |||||||    
T  15057464 taactataattaataaaaatgttttaatatatgatactaattttactattaaaatcaa 15057521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 52837269 - 52837330
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataa 241  Q
    ||||||||||||| |||||||||||||| ||  |||| |  ||||||| |||||||||||||    
T  52837269 tattatacctttaattattgaatttcattcatattaactactccactagctacaattaataa 52837330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 295
Target Start/End: Complemental strand, 17988643 - 17988572
Alignment:
Q  226 taactacaattaataaatatgttttagtaaatacta--ctaattttactattgaaatcaatacaattaatca 295  Q
    ||||||||||||||||   | |||||||||||| ||  |||||||||  ||||||||||| |||||||||||    
T  17988643 taactacaattaataagagtattttagtaaataatatactaattttaacattgaaatcaacacaattaatca 17988572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 299
Target Start/End: Complemental strand, 20564112 - 20564076
Alignment:
Q  263 taattttactattgaaatcaatacaattaatcatttc 299  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  20564112 taattttactattgaaatcaataaaatttatcatttc 20564076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 331
Target Start/End: Complemental strand, 35367694 - 35367622
Alignment:
Q  260 tactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaac-tttaaacgacta 331  Q
    |||||||||||| ||  ||||||| ||||||||||||||   ||||||||||||| ||||  |||||||||||    
T  35367694 tactaattttaccatcaaaatcaacacaattaatcattttcttaataatcgtgcataaacgcttaaacgacta 35367622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 35538678 - 35538750
Alignment:
Q  226 taactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcattt 298  Q
    ||||||||||||||||  || |||||||||||| ||   ||||||  ||||||||||| ||||||||| ||||    
T  35538678 taactacaattaataaggatattttagtaaataatatccattttatcattgaaatcaacacaattaataattt 35538750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 8e-55; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 152 - 332
Target Start/End: Complemental strand, 36460570 - 36460390
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||  |||| ||||||||||||||||  || |||||    
T  36460570 caatgcaatatttattatttgtttccactattatacccttatttattgaatttcatccaacttaattactccattaactacaattaataagaatatttta 36460471  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
     |||||  ||||||||||||||||||||| || ||||||||| ||||   ||||||||||||| |||||||||||||||||    
T  36460470 ataaatgttactaattttactattgaaattaacacaattaataattttcttaataatcgtgcacaaactttaaacgactaa 36460390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 152 - 332
Target Start/End: Original strand, 11632044 - 11632221
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    ||||| |||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||  |||||||    
T  11632044 caatgtaatatttattattt-tttca-ctattatacttttatttattgaatttcatccaacttaacttttccactaactacaattaataaaggtgtttta 11632141  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    ||||||||||||||||||||  |||||||||| |||||||||||||| | ||||||||||||| |||  ||||| ||||||    
T  11632142 gtaaatactactaattttaccgttgaaatcaacacaattaatcattt-tttaataatcgtgcacaaatcttaaatgactaa 11632221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 122 - 328
Target Start/End: Complemental strand, 43254043 - 43253841
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatatttatta-tttgtttcaactattatacctttatttattgaatttcatccaacttaattgt 220  Q
    |||| ||||||||||||||||||     |||||||||| |||||||| ||| |||| ||||||||||| ||||||| |||||||||||| |||||| |      
T  43254043 caaaataattgtcactttacaat-----accaatgcaacatttattagtttttttccactattatacccttatttaatgaatttcatcccacttaactac 43253949  T
Q  221 tccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaact 320  Q
    |||||||||||||||||||||   ||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||  ||||||||||||| ||||     
T  43253948 tccactaactacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcacaaacc 43253849  T
Q  321 ttaaacga 328  Q
    ||||||||    
T  43253848 ttaaacga 43253841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 161 - 331
Target Start/End: Complemental strand, 8679198 - 8679029
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatact 260  Q
    ||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||  | ||||||||| |||||||||  || ||||||||||| ||    
T  8679198 atttattattt-tttccactattatacccttatttattgaatttcatccaacttaattaattcactaactataattaataaggatcttttagtaaatgct 8679100  T
Q  261 actaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||||| ||||||||||| |||||||||||||||  ||||||||||||| |||  |||||||||||    
T  8679099 actaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcataaatcttaaacgacta 8679029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 180 - 331
Target Start/End: Complemental strand, 29024091 - 29023941
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||| || ||||||||||||||  |||||||||||| ||  |||    
T  29024091 tattataccattatttattgaatttcatccaacttaattactccactaactacaattaat-aagatgttttagtaaatgatactaattttaccatcaaaa 29023993  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||| |||||||||||||| | ||||||||||||| |||| |||||||||||    
T  29023992 tcaacacaattaatcatttttttaataatcgtgcataaaccttaaacgacta 29023941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 150 - 331
Target Start/End: Complemental strand, 37695823 - 37695640
Alignment:
Q  150 accaatgcaatatttattatttgttt-caactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtt 248  Q
    |||||||||| ||||||||||| ||| | | ||||||||| ||||||||||||||||||| ||||||| |  |||||||||||||||||||||   ||||    
T  37695823 accaatgcaacatttattattttttttccattattatacccttatttattgaatttcatctaacttaactactccactaactacaattaataagggtgtt 37695724  T
Q  249 ttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgca-aaaactttaaacgacta 331  Q
    |||||||||  || ||||||||| ||||||||||| |||||||||||||||  ||||||||||||| ||||| |||||||||||    
T  37695723 ttagtaaatgatattaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcacaaaaccttaaacgacta 37695640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 150 - 331
Target Start/End: Original strand, 19822971 - 19823151
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||  ||||||||||| |||||  || |||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||   |||||    
T  19822971 accaatgcagcatttattatttttttcat-taatatacccttatttattgaatttcatccaacttaactattccactaactacaattaataagggtgttt 19823069  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||  |||||||| ||| ||  ||||||| |||||||||||||||  ||||||||||||| |||| |||||| ||||    
T  19823070 tagtaaatgatactaattctaccatcaaaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacaacta 19823151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 181 - 326
Target Start/End: Complemental strand, 28690907 - 28690762
Alignment:
Q  181 attatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaat 280  Q
    ||||||| |||||||||||||||||||||||||||| | |  |||||||||||||||||||| || |||||||||||  || |||||||||  |||||||    
T  28690907 attatacatttatttattgaatttcatccaacttaactatctcactaactacaattaataaagatattttagtaaatgatattaattttaccgttgaaat 28690808  T
Q  281 caatacaattaatcatttctataataatcgtgcaaaaactttaaac 326  Q
    ||| |||||||||||||||| ||||||||||||| |||| ||||||    
T  28690807 caacacaattaatcatttctttaataatcgtgcacaaaccttaaac 28690762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 127 - 332
Target Start/End: Original strand, 37311890 - 37312091
Alignment:
Q  127 taattgtcactttacaatgcaacaccaatgcaatatttattatt-tgtttcaactattatacctttatttattgaatttcatccaacttaattgttccac 225  Q
    ||||||||||||||||||     | |||||||  |||||||||| | |||| | ||||||||  ||||||||||||||||||  || |||| |  |||||    
T  37311890 taattgtcactttacaat-----atcaatgcagcatttattattatttttctattattatactcttatttattgaatttcattaaatttaactactccac 37311984  T
Q  226 taactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaa 325  Q
    ||||||||||||||||   | ||||||||||| ||||||||||||| ||||||||||| |||||||||||||||  ||||||||||||| |||| |||||    
T  37311985 taactacaattaataagggttttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcataaaccttaaa 37312084  T
Q  326 cgactaa 332  Q
    |||||||    
T  37312085 cgactaa 37312091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 150 - 330
Target Start/End: Complemental strand, 10366805 - 10366618
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaata----- 244  Q
    |||||||||| ||||||||||| || | | ||||||||| ||||||||||||||||||||||||||| |  | ||||||||||||||||||| ||         
T  10366805 accaatgcaacatttattattttttcccattattatacccttatttattgaatttcatccaacttaactacttcactaactacaattaataattaataag 10366706  T
Q  245 --tgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgact 330  Q
      ||||||| |||||  |||||||||||| ||||||||||| ||||||||||||||   ||||||||||||| |||| ||||||||||    
T  10366705 agtgttttaataaatgatactaattttaccattgaaatcaacacaattaatcattttcttaataatcgtgcacaaaccttaaacgact 10366618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 180 - 330
Target Start/End: Original strand, 14194545 - 14194694
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||||||||| |||||||||||||||||||||||  ||||||||| |||||| |||||  | |||||||||||  |||||||||||  |||||||    
T  14194545 tattatacctttattaattgaatttcatccaacttaattactccactaac-acaattcataaaagtattttagtaaatggtactaattttatcattgaaa 14194643  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgact 330  Q
    |||| |||||| ||||||||| ||| ||||||||| |||| ||||||||||    
T  14194644 tcaacacaattgatcatttctttaaaaatcgtgcacaaaccttaaacgact 14194694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 161 - 331
Target Start/End: Complemental strand, 30190805 - 30190635
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatact 260  Q
    ||||||||||  |||| | |||| |||| ||||| ||||||||||||||||||||| |  |||||||||||||||||||||   | |||||||||||  |    
T  30190805 atttattattaatttccattattttacccttattaattgaatttcatccaacttaactactccactaactacaattaataagggtattttagtaaatgat 30190706  T
Q  261 actaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||||| ||||||||||| |||||||||||||||  | |||| |||||| |||| |||||||||||    
T  30190705 actaattttaccattgaaatcaacacaattaatcatttccttcataaccgtgcacaaaccttaaacgacta 30190635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 150 - 298
Target Start/End: Complemental strand, 3901305 - 3901157
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    ||||||| || ||||||||||| |||| | ||||||||| ||||||||||||||||||||||||||| |   ||||||||||||| ||||||  ||||||    
T  3901305 accaatgtaacatttattatttttttccattattatacccttatttattgaatttcatccaacttaagtaccccactaactacaactaataagaatgttt 3901206  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcattt 298  Q
    ||||||||  || ||||||||  |||||||| |||||||||||||||||    
T  3901205 tagtaaatgatattaattttatcattgaaattaatacaattaatcattt 3901157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 180 - 332
Target Start/End: Original strand, 1778632 - 1778783
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||| ||||||||||||||||||||||||||  |  ||||||||||||||| |||||  ||||||||||||||   | ||||||||  |||||||    
T  1778632 tattatacccttatttattgaatttcatccaacttatctactccactaactacaat-aataaggatgttttagtaaatgtcattaattttatcattgaaa 1778730  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    |||| |||||||||||||||  |||||||| |||| |||| ||||||||||||    
T  1778731 tcaacacaattaatcatttccttaataatcatgcacaaaccttaaacgactaa 1778783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 152 - 328
Target Start/End: Original strand, 11905784 - 11905959
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||||||| ||||||||||| |||| | ||||||| |||||||||||||||||||||||||||||    |||| ||||||||||||||||   || ||||    
T  11905784 caatgcaacatttattattt-tttccattattatatctttatttattgaatttcatccaacttaacaactccattaactacaattaataagggtgcttta 11905882  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacga 328  Q
    ||||||  |||||||||||  ||  |||| || ||||||||||||||   ||||||||||||| |||||||||||||    
T  11905883 gtaaatgatactaattttatcatcaaaattaacacaattaatcattttcttaataatcgtgcataaactttaaacga 11905959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 148 - 308
Target Start/End: Complemental strand, 23004539 - 23004380
Alignment:
Q  148 acaccaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgt 247  Q
    |||||||||||  |||| || ||| ||||| || ||| ||| |||||||||||||||||| |||||||| |  |||||||||||||||||||||   |||    
T  23004539 acaccaatgcagcattttttttttttttca-cttttacacccttatttattgaatttcatacaacttaactactccactaactacaattaataagggtgt 23004441  T
Q  248 tttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataat 308  Q
    ||||||| |||||||||||||||| ||||||||| | |||||||||||||||  |||||||    
T  23004440 tttagtatatactactaattttaccattgaaatcgacacaattaatcatttccttaataat 23004380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 122 - 327
Target Start/End: Complemental strand, 37773145 - 37772943
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatattta--ttatttgtttcaactattatacctttatttattgaatttcatccaacttaattg 219  Q
    |||| ||||||||||||||||||     |||||||||  |||||  |||||| |||| | ||||||||| ||||||| |||||||||| |||||||| |     
T  37773145 caaaataattgtcactttacaat-----accaatgcagcatttattttatttttttccattattatacccttatttaatgaatttcattcaacttaacta 37773051  T
Q  220 ttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaac 319  Q
    ||||||| |||| |||||||||   | |||||||||||  || ||||||||| |||| ||||||||||||||||||||||  |||||||| |||| ||||    
T  37773050 ttccactgactataattaataagggtattttagtaaatgatattaattttaccattgtaatcaatacaattaatcatttccttaataatcatgcacaaac 37772951  T
Q  320 tttaaacg 327  Q
     |||||||    
T  37772950 cttaaacg 37772943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 153 - 331
Target Start/End: Original strand, 17652715 - 17652888
Alignment:
Q  153 aatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttag 252  Q
    |||||| ||||||| |||| |||||| ||||||||| ||||||||| ||||||||||||||||| |    |||||||||||||||||||  |||||||||    
T  17652715 aatgcagtatttataattt-tttcaattattatacccttatttattaaatttcatccaacttaactacctcactaactacaattaataaggatgttttag 17652813  T
Q  253 taaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||    ||||| |||||| ||  ||||||| |||||||||||||||  ||||||||||||| |||| | |||||||||    
T  17652814 taa----tactagttttaccatcaaaatcaacacaattaatcatttccttaataatcgtgcataaacctcaaacgacta 17652888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 144 - 332
Target Start/End: Complemental strand, 38137608 - 38137417
Alignment:
Q  144 tgcaacaccaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaat 243  Q
    ||||| || ||||||||||||||||||  |||| ||||||||| ||||||||||||||||||||| || |||| |   |||||||||||| |||||||      
T  38137608 tgcaatactaatgcaatatttattattattttccactattatatctttatttattgaatttcatcgaatttaactaccccactaactacagttaataaga 38137509  T
Q  244 atgttttagtaaat---actactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    || |||||||| ||   | |||||||||||||||||||||| | ||||| ||| |||||  | |||||| |||| |||| ||||||||||||    
T  38137508 atattttagtagatgtcagtactaattttactattgaaatcgacacaatgaattatttcatttataatcatgcacaaaccttaaacgactaa 38137417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 180 - 328
Target Start/End: Original strand, 37497481 - 37497629
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    |||||||| |||||||||||||||||||||||||||| |  ||||||||||||| |||| ||   |||||||||||||  |||||||||||| ||  |||    
T  37497481 tattatacgtttatttattgaatttcatccaacttaactactccactaactacagttaacaacggtgttttagtaaatgatactaattttaccatcaaaa 37497580  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacga 328  Q
    |||| ||||| |||||||||  ||||||||||||| |||  ||||||||    
T  37497581 tcaacacaataaatcatttccttaataatcgtgcataaatcttaaacga 37497629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 162 - 298
Target Start/End: Original strand, 12904835 - 12904972
Alignment:
Q  162 tttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaat-aaatatgttttagtaaatact 260  Q
    |||||| ||| |||| ||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||| ||| || ||||  |||||  |    
T  12904835 tttattttttttttccactattatacccttatttattgaatttcatccaacttaattactccactaactacaattaataaaagatattttgataaatcat 12904934  T
Q  261 actaattttactattgaaatcaatacaattaatcattt 298  Q
    ||||||||||  ||||||||||| | ||||||| ||||    
T  12904935 actaattttataattgaaatcaacataattaattattt 12904972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 187 - 331
Target Start/End: Complemental strand, 24569219 - 24569075
Alignment:
Q  187 cctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatac 286  Q
    |||| ||||| |||||||||| |||||||| |  |||||||||||||||||||||   | |||||||||||| || ||||||||| ||||||||||| ||    
T  24569219 ccttcatttaatgaatttcattcaacttaactactccactaactacaattaataagggtattttagtaaataatattaattttaccattgaaatcaacac 24569120  T
Q  287 aattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||||||   ||||||||||||| |||  |||| ||||||    
T  24569119 aattaatcattttcttaataatcgtgcataaatcttaagcgacta 24569075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 161 - 328
Target Start/End: Original strand, 27471305 - 27471472
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatact 260  Q
    ||||||||||| | || ||||  |||||||||||||||||||||||| |||||||| |  |||||||  || |||||||||   ||||||||||||| |     
T  27471305 atttattatttttgtccactaccatacctttatttattgaatttcattcaacttaactactccactacttataattaataagagtgttttagtaaatgca 27471404  T
Q  261 actaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacga 328  Q
    |||||||| || ||||||||||| | ||||||||||||   ||||||||||||| |||  ||||||||    
T  27471405 actaatttcaccattgaaatcaacataattaatcattttcttaataatcgtgcacaaatcttaaacga 27471472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 152 - 307
Target Start/End: Original strand, 30711035 - 30711189
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||| ||| ||||||||||| ||||| ||||||||   ||||||||||||||||||| |||||||||| |||| ||||||||||||||||   |||||||    
T  30711035 caatacaacatttattatttttttca-ctattataatcttatttattgaatttcatctaacttaattgctccattaactacaattaataatggtgtttta 30711133  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatttctataataa 307  Q
    ||||||  || ||||||||  ||| ||||||| | ||||||| |||||| ||||||    
T  30711134 gtaaatgatattaattttatcattaaaatcaacataattaattatttctttaataa 30711189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 178 - 325
Target Start/End: Original strand, 34750483 - 34750630
Alignment:
Q  178 actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattga 277  Q
    ||||||||||| ||||||||| | |||||||||| |||| |  ||||| |||||||||||||||  ||||||||||||||  |||||||||||| ||| |    
T  34750483 actattataccattatttattaattttcatccaagttaactactccaccaactacaattaataaggatgttttagtaaatgatactaattttaccattaa 34750582  T
Q  278 aatcaatacaattaatcatttctataataatcgtgcaaaaactttaaa 325  Q
    |||||| ||||| |||||||||   || ||||||||| |||| |||||    
T  34750583 aatcaacacaatcaatcatttcatcaaaaatcgtgcacaaaccttaaa 34750630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 150 - 288
Target Start/End: Complemental strand, 39043911 - 39043772
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||| ||||||||||| |||||  ||||||||| |||||||||||||||||| |||||||| |  ||||||||||||||||||||||  | |||    
T  39043911 accaatgcaacatttattattt-tttcat-tattatacccttatttattgaatttcattcaacttaactactccactaactacaattaataaaggtattt 39043814  T
Q  250 tagtaa---atactactaattttactattgaaatcaatacaa 288  Q
    ||||||   |||||| ||||||||| ||||||||||| ||||    
T  39043813 tagtaaatgatactattaattttaccattgaaatcaacacaa 39043772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 190 - 332
Target Start/End: Original strand, 3313253 - 3313391
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaat 289  Q
    ||||||||||||||||||||||||||| |  |||| ||||||||||||||||   ||||||||| ||| ||||||||||||| ||||||||| | |        
T  3313253 ttatttattgaatttcatccaacttaaatactccattaactacaattaataagggtgttttagttaattctactaattttaccattgaaatcgaca---- 3313348  T
Q  290 taatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    |||||||||   ||||||||||||| |||| ||||||||||||    
T  3313349 taatcattttcttaataatcgtgcacaaaccttaaacgactaa 3313391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 160 - 331
Target Start/End: Complemental strand, 12736717 - 12736547
Alignment:
Q  160 tatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatac 259  Q
    |||||||||||  ||||| |||||||||| ||||||||||||||| |||||| |||| |  | |||||| ||||||||||||   | || ||||||||      
T  12736717 tatttattattgttttca-ctattatacccttatttattgaattttatccaaattaactactacactaagtacaattaataagggtattgtagtaaatga 12736619  T
Q  260 tactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||||||||  |||  |||||| |||||||||||||||  ||| ||||||||| ||||||||||| ||||    
T  12736618 tactaattttatcattagaatcaacacaattaatcatttccttaaaaatcgtgcacaaactttaaacaacta 12736547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 180 - 331
Target Start/End: Original strand, 49830125 - 49830270
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    |||||||| ||||||||||||||||||| |||||  |       ||||||||||||||||||   | |||||||||||  || |||||||||||||||||    
T  49830125 tattatacatttatttattgaatttcattcaactcca-------actaactacaattaataatggtattttagtaaatgatattaattttactattgaaa 49830217  T
Q  280 tcaatacaattaatca-tttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||| ||||||||||| ||| | ||||||||||||| |||| |||||||||||    
T  49830218 tcaacacaattaatcattttttttaataatcgtgcacaaacgttaaacgacta 49830270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 326
Target Start/End: Original strand, 19611896 - 19612043
Alignment:
Q  178 actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattga 277  Q
    ||||| |||| |||||||||||||||||||| ||||||| |  ||||||||| |||||||||||  || |||||||||||  || ||||||||  |||||    
T  19611896 actataatacatttatttattgaatttcatcaaacttaactactccactaacaacaattaataaggatattttagtaaattata-taattttaacattga 19611994  T
Q  278 aatcaatacaattaatca-tttctataataatcgtgcaaaaactttaaac 326  Q
    |||||| ||||||||||| ||||| ||| |||||| || |||||||||||    
T  19611995 aatcaacacaattaatcactttct-taaaaatcgtacacaaactttaaac 19612043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 190 - 331
Target Start/End: Original strand, 45710849 - 45710990
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaat 289  Q
    |||||||||||| |||||||||||||| |  ||||||||||||||||||||||  |||||||||||||  || ||||||||| ||  ||||||| | |||    
T  45710849 ttatttattgaacttcatccaacttaactactccactaactacaattaataaaagtgttttagtaaatgatattaattttaccatcaaaatcaacataat 45710948  T
Q  290 taatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||||||   ||| || ||||||  ||| |||||||||||    
T  45710949 taatcattttcttaacaaccgtgcatcaaccttaaacgacta 45710990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 150 - 298
Target Start/End: Original strand, 36476543 - 36476691
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||  |||||||| || |||| | ||||||||| ||||||||||||||||||| ||||||| |  || ||||||||||||||||||   | |||    
T  36476543 accaatgcagcatttattacttttttctattattatacccttatttattgaatttcatcaaacttaactactctactaactacaattaataagggtattt 36476642  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcattt 298  Q
    ||||||||  || ||||||||| |||| |||||| ||||| ||| ||||    
T  36476643 tagtaaatgatattaattttaccattgcaatcaacacaatcaattattt 36476691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 160 - 283
Target Start/End: Complemental strand, 24245238 - 24245117
Alignment:
Q  160 tatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatac 259  Q
    |||||||||||| ||||||||||||||   |||||||||||||| ||||| | |||| |  |  ||||| |||||||||||| ||||||||||||||||     
T  24245238 tatttattattt-tttcaactattatattattatttattgaattgcatccgatttaactactttactaagtacaattaataa-tatgttttagtaaataa 24245141  T
Q  260 tactaattttactattgaaatcaa 283  Q
    ||||||||||| ||||||||||||    
T  24245140 tactaattttattattgaaatcaa 24245117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 152 - 332
Target Start/End: Complemental strand, 49447946 - 49447768
Alignment:
Q  152 caatgcaatatttat-tatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttt 250  Q
    ||||||| ||||||| ||||| |||| ||||||||||| ||||||||| ||||||||| || |||| | ||| ||||||||||||||||||   | ||||    
T  49447946 caatgcactatttatatatttttttctactattatacccttatttattaaatttcatcaaatttaactattctactaactacaattaataagggtatttt 49447847  T
Q  251 agtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
     ||||||| || || |||     |||||||||| |||||||||||||||  |||| ||||| || |||| ||||||||||||    
T  49447846 ggtaaataatattatttt---cgttgaaatcaacacaattaatcatttcgttaattatcgtacacaaacattaaacgactaa 49447768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 153 - 331
Target Start/End: Complemental strand, 51838113 - 51837934
Alignment:
Q  153 aatgcaatatttattatttgttt-caactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    ||||||| ||||||||||| ||| | ||||||||||| ||||||| |||||||||| |||| ||| |  ||||||| |||||| ||||||   | |||||    
T  51838113 aatgcaacatttattattttttttccactattatacccttatttaatgaatttcattcaacgtaactactccactagctacaactaataagggtatttta 51838014  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||  || ||||||||  ||||||||||| ||||||||||||||   ||||| || |||| |||| ||||| |||||    
T  51838013 gtaaatgatattaattttatcattgaaatcaacacaattaatcatttacttaatactcatgcacaaaccttaaatgacta 51837934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 329
Target Start/End: Original strand, 44301522 - 44301700
Alignment:
Q  152 caatgcaatatttattatt-tgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttt 250  Q
    |||||||| |||||||| | | |||| ||||||||||  ||||||||||||||||||||||||||| |  |||||||| ||||||| ||||   | ||||    
T  44301522 caatgcaacatttattaatatttttccactattatactcttatttattgaatttcatccaacttaactactccactaattacaattgataagggtatttt 44301621  T
Q  251 agtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgac 329  Q
    |||||||  |||||||||||  ||||||||||| | ||||||  |||||  ||| | ||| ||| |||| |||||||||    
T  44301622 agtaaatgatactaattttatcattgaaatcaacataattaaatatttccttaaaagtcgggcacaaaccttaaacgac 44301700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 299
Target Start/End: Complemental strand, 30682182 - 30682073
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaat 289  Q
    |||||||||||||||| |||||||||||| ||||| ||||||||||||||||   | |||||||||||  |||| ||||||  ||| |||| || |||||    
T  30682182 ttatttattgaatttcgtccaacttaattattccattaactacaattaataagattattttagtaaatgatactcattttaacattaaaattaaaacaat 30682083  T
Q  290 taatcatttc 299  Q
    ||||||||||    
T  30682082 taatcatttc 30682073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 150 - 331
Target Start/End: Original strand, 38795303 - 38795484
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||||||||  | ||  |||| |||||||| || || |||||| |||||||||||||||||    ||||| |||||||||||||||     |||    
T  38795303 accaatgcaatattttattttattttccactattatgcccttttttattaaatttcatccaacttaacaactccaccaactacaattaataagggcattt 38795402  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
      ||||||  |||||||||||| |||||||| || |||||||||||||||  |||  |||||||| |||| |||||||||||    
T  38795403 gggtaaatgatactaattttaccattgaaataaacacaattaatcatttccttaaatatcgtgcacaaacattaaacgacta 38795484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 298
Target Start/End: Original strand, 54726447 - 54726592
Alignment:
Q  153 aatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttag 252  Q
    ||||||| |||||||| || || | | ||| ||||| ||||||||| || |||||| ||||||| |  |||| ||||||||||||||||| |||||||||    
T  54726447 aatgcaacatttattagtttttcccattataatacccttatttattaaacttcatctaacttaactactccattaactacaattaataaagatgttttag 54726546  T
Q  253 taaatactactaattttactattgaaatcaatacaattaatcattt 298  Q
    |||||  || ||||||||| ||  ||||||| ||| ||||||||||    
T  54726547 taaatgatattaattttaccatcaaaatcaacacatttaatcattt 54726592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 153 - 332
Target Start/End: Complemental strand, 31158663 - 31158496
Alignment:
Q  153 aatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttag 252  Q
    |||||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| ||||||| | |||          || |||||    ||||||||    
T  31158663 aatgcagtatttattatttttttca-ctattataccattatttattgaatttcatctaacttaactattc----------aaataataggagtgttttag 31158575  T
Q  253 taaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    |||||  || |||||||||||| |||||||  |||||||||||||| | ||||||||||||| |||| ||||||||||||    
T  31158574 taaatgttattaattttactatcgaaatcagcacaattaatcattt-tttaataatcgtgcacaaaccttaaacgactaa 31158496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 264 - 332
Target Start/End: Complemental strand, 33491125 - 33491057
Alignment:
Q  264 aattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    |||||||||||||||||||| |||||||||||||||  ||||||||||||| |||| ||||||||||||    
T  33491125 aattttactattgaaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgactaa 33491057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 307
Target Start/End: Complemental strand, 36463090 - 36462945
Alignment:
Q  160 tatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatac 259  Q
    |||||||||||| ||| || |||||||  |||||||||| |||||||||||||||||||  ||||| ||| |||||||||||   | ||||||||||| |    
T  36463090 tatttattattttttttaa-tattatat-tttatttatttaatttcatccaacttaattactccacaaacaacaattaataaggttattttagtaaatgc 36462993  T
Q  260 tactaattttactattgaaatcaatacaattaatcatttctataataa 307  Q
    ||| |||||||  ||| |||||||||| || |||||||| | ||||||    
T  36462992 taccaattttaacattaaaatcaatactatcaatcatttttttaataa 36462945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 5323088 - 5322914
Alignment:
Q  155 tgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagta 254  Q
    |||| |||||||||  | |||| | ||||||||| ||||||||||||||||||| ||||||| |  |  ||||| || ||||||||| | | ||||||||    
T  5323088 tgcagtatttattacctttttccattattatacccttatttattgaatttcatcaaacttaactactttactaattataattaataagtgtattttagta 5322989  T
Q  255 aatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||  || ||||||||  | ||||||||| | |||||||||||  | ||||||||||||| |||| |||||| ||||    
T  5322988 aatgatattaattttatcactgaaatcaacataattaatcatt--tttaataatcgtgcacaaaccttaaacaacta 5322914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 24703622 - 24703687
Alignment:
Q  151 ccaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaa 216  Q
    |||||| ||||||| |||||| |||| ||||||||| |||||||||||||||||||||||||||||    
T  24703622 ccaatgtaatatttgttatttctttccactattatatctttatttattgaatttcatccaacttaa 24703687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 332
Target Start/End: Complemental strand, 51064864 - 51064792
Alignment:
Q  260 tactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    |||||||||||| ||||||| ||| |||||||||||||| | ||||| ||||||| |||||||||||||||||    
T  51064864 tactaattttaccattgaaagcaacacaattaatcatttttttaatattcgtgcataaactttaaacgactaa 51064792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 298
Target Start/End: Original strand, 52290892 - 52291000
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaat 289  Q
    |||||||||||| || || |||||||| |  ||||||||||| |||||||||   ||||||| |||||  |||||||||||| ||  |||||||||||||    
T  52290892 ttatttattgaactttattcaacttaactactccactaactataattaataaggctgttttaataaatggtactaattttaccatcaaaatcaatacaat 52290991  T
Q  290 taatcattt 298  Q
    |||||||||    
T  52290992 taatcattt 52291000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 196 - 331
Target Start/End: Original strand, 43719272 - 43719406
Alignment:
Q  196 attgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatca 295  Q
    |||||||| ||||||| |||| |  |||||||||||||||||||||  |||||| ||| |||  || ||||||||| ||| ||||||| |||||||||||    
T  43719272 attgaattccatccaatttaactactccactaactacaattaataaggatgtttcagtgaatgata-taattttaccattaaaatcaacacaattaatca 43719370  T
Q  296 tttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||   |||| |||||| | ||||||||| ||||||    
T  43719371 ttttattaatgatcgtgtacaaactttaaccgacta 43719406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 201 - 300
Target Start/End: Complemental strand, 54477564 - 54477465
Alignment:
Q  201 atttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttct 300  Q
    ||||||| |||||||| |  |||| ||||||||||||||||| || |||||||||||  || ||||||||| ||| ||||||| |||||||| |||||||    
T  54477564 atttcattcaacttaactactccattaactacaattaataaaaatattttagtaaatgatattaattttaccattaaaatcaacacaattaaccatttct 54477465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 298
Target Start/End: Original strand, 19609288 - 19609406
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    |||||||| |||||||||||||||| ||| ||||||  |  ||||||||| |||| ||||||  || |||| ||||||  || ||||||||| |||||||    
T  19609288 tattatacatttatttattgaattttatcaaacttatctactccactaacaacaagtaataagaatatttttgtaaatgatattaattttacgattgaaa 19609387  T
Q  280 tcaatacaattaatcattt 298  Q
    |||| |||| |||||||||    
T  19609388 tcaacacaaataatcattt 19609406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 23068187 - 23068248
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataa 241  Q
    |||||||| |||||||||||||||||||| ||||||| | || ||| |||||||||||||||    
T  23068187 tattatacttttatttattgaatttcatctaacttaaatatttcacaaactacaattaataa 23068248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 331
Target Start/End: Original strand, 34957502 - 34957643
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaat 289  Q
    ||||||||||||||||||  |||| || |  ||||||||||| |||||||||  || ||| |||||||  ||| |||||||| ||  || |||| |||||    
T  34957502 ttatttattgaatttcatttaactgaactactccactaactataattaataaggatatttaagtaaattatacaaattttaccatcaaattcaacacaat 34957601  T
Q  290 taatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||||  || |||| || || |||| |||||||||||    
T  34957602 taatcatttccttagtaattgtccataaaccttaaacgacta 34957643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 331
Target Start/End: Original strand, 38512012 - 38512165
Alignment:
Q  178 actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattga 277  Q
    |||| |||||| |||||| || |||| |||| ||||||| |  |||| ||| |||||| ||||||||| ||||| |||||  ||  |||||||  ||| |    
T  38512012 actactatacccttattttttaaattccatcaaacttaactactccaataattacaatcaataaatatattttaataaatgatatcaattttatcattaa 38512111  T
Q  278 aatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||||| ||||||| |||| || || |||| | || ||||||||||||||||    
T  38512112 aatcaataaaattaattatttttaaaaaaatcatacacaaactttaaacgacta 38512165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 325
Target Start/End: Complemental strand, 50035299 - 50035198
Alignment:
Q  224 actaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaacttta 323  Q
    ||||||||||||||| ||   |||||| |||||| |||||||||||| |||||||||||| | ||||| ||||||   |||||||| |||| |||| |||    
T  50035299 actaactacaattaacaacggtgttttggtaaatgctactaattttattattgaaatcaacataattattcattttcttaataatcatgcacaaacctta 50035200  T
Q  324 aa 325  Q
    ||    
T  50035199 aa 50035198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 331
Target Start/End: Original strand, 53560216 - 53560357
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaat 289  Q
    |||||||||||| ||||| |||||||| |  || |||||||| | |||||||   |||||||||||||  ||| |||||||| ||  ||||||| | |||    
T  53560216 ttatttattgaacttcattcaacttaactactctactaactatatttaataagggtgttttagtaaatgatacaaattttaccatcaaaatcaacataat 53560315  T
Q  290 taatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||||  |||| ||||||||  ||| |||||| ||||    
T  53560316 taatcatttccttaatcatcgtgcatcaaccttaaacaacta 53560357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 190 - 281
Target Start/End: Original strand, 38705174 - 38705267
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaa---atactactaattttactattgaaatc 281  Q
    ||||||||||||||||||| |||||||||  || ||||||||||||||||||  ||  ||||||||   ||| |||||||||||| |||||||||    
T  38705174 ttatttattgaatttcatctaacttaattactcaactaactacaattaataagaat-atttagtaaatgatagtactaattttaccattgaaatc 38705267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 41351688 - 41351628
Alignment:
Q  182 ttatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaa 242  Q
    |||||||||||||||||||||||||| |||||||| |  |||||||||||  |||||||||    
T  41351688 ttatacctttatttattgaatttcattcaacttaactactccactaactatcattaataaa 41351628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 263
Target Start/End: Complemental strand, 33491540 - 33491402
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatatttattatttgtttca-actattatacctttatttattgaa-tttcatccaacttaattg 219  Q
    |||| ||||||||||||||||||     || |||| | ||||||| |||| ||||  ||||||||||| ||||||||| || |||||| |||||||| |     
T  33491540 caaaataattgtcactttacaat-----actaatgtagtatttatgatttttttcgcactattatacccttatttattaaaatttcatacaacttaacta 33491446  T
Q  220 ttccactaactacaattaataaatatgttttagtaaatactact 263  Q
     ||||||||||| |||||||||   ||||||||||||| |||||    
T  33491445 ctccactaactataattaataagagtgttttagtaaattctact 33491402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 50036576 - 50036522
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaa 216  Q
    ||||||||||| ||||  |||||||||||||||||||||||||||||| |||||||    
T  50036576 atttattattt-tttccgctattatacctttatttattgaatttcatcaaacttaa 50036522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 299
Target Start/End: Complemental strand, 52206921 - 52206854
Alignment:
Q  232 caattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttc 299  Q
    |||||||||||||| |||||||||||  || ||||||||| ||||||||||||  || ||||||||||    
T  52206921 caattaataaatatattttagtaaatgatattaattttaccattgaaatcaatttaactaatcatttc 52206854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 298
Target Start/End: Complemental strand, 29595809 - 29595735
Alignment:
Q  224 actaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcattt 298  Q
    ||||| || |||||||||| || ||||| |||||| || ||||||||||||| ||||||||| |||||| |||||    
T  29595809 actaattataattaataaaaatattttaataaataatattaattttactattaaaatcaatataattaaccattt 29595735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 268
Target Start/End: Complemental strand, 27549440 - 27549323
Alignment:
Q  152 caatgcaatatttattatttgtttca-actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttt 250  Q
    |||||||| ||||||||||| ||||  ||||||||| ||||||||||||||||| ||  || |||| |   |||||||||| || ||||||   ||||||    
T  27549440 caatgcaacatttattatttttttcccactattataactttatttattgaatttaatttaatttaactacgccactaactataactaataatgttgtttt 27549341  T
Q  251 agtaaatactactaattt 268  Q
    ||||||| | ||||||||    
T  27549340 agtaaatgcaactaattt 27549323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 282
Target Start/End: Original strand, 33459046 - 33459141
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaa---atactactaattttactattgaaatca 282  Q
    ||||||| | |||||||| ||| |||| | ||| ||||||||||||||||||| || ||||| |||   |||||||||||||||  ||||||||||    
T  33459046 ttatttaataaatttcattcaatttaagtattctactaactacaattaataaagatattttaataaatgatactactaattttataattgaaatca 33459141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 40194485 - 40194553
Alignment:
Q  173 tttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataa 241  Q
    |||| ||||||||| ||||||||||| |||||| ||||||| || |   ||||||||||||||||||||    
T  40194485 tttccactattatatctttatttattaaatttcttccaactcaactacgccactaactacaattaataa 40194553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 299
Target Start/End: Original strand, 42278694 - 42278773
Alignment:
Q  220 ttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttc 299  Q
    |||||||||||| ||||||||    |||||||||||||  |  ||||||||| |||||||||||| ||| ||||||||||    
T  42278694 ttccactaactataattaatatgagtgttttagtaaatgatgttaattttacgattgaaatcaattcaactaatcatttc 42278773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 241
Target Start/End: Complemental strand, 41038538 - 41038458
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataa 241  Q
    ||||||||||| |||| | ||| ||| | |||||||||||| |||| ||||||||| |  | || ||||||||||||||||    
T  41038538 atttattatttttttccattataatatccttatttattgaacttcaaccaacttaactacttcattaactacaattaataa 41038458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 8e-52; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 122 - 328
Target Start/End: Complemental strand, 8947231 - 8947028
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgtt 221  Q
    |||| ||||||||| |||||||  ||| |||||||||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||||||| |  |    
T  8947231 caaaataattgtcattttacaa--caataccaatgcaatatttattatttttttcat-tattatacccttatttattgaatttcatccaacttaactact 8947135  T
Q  222 ccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactt 321  Q
    |||||||||| |||||||||  ||||||||||||||| |||||||||||  ||||||||||| |||||||||||||||  |||||||  |||| ||||||    
T  8947134 ccactaactataattaataaggatgttttagtaaatattactaattttatcattgaaatcaacacaattaatcatttccttaataattatgcacaaactt 8947035  T
Q  322 taaacga 328  Q
    |||||||    
T  8947034 taaacga 8947028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 122 - 332
Target Start/End: Complemental strand, 5789824 - 5789620
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgtt 221  Q
    |||| ||||||||||||||||||     | |||||||  ||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||| | ||    
T  5789824 caaaataattgtcactttacaat-----atcaatgcatcatttattattt-tttccactattataccattatttattgaatttcatccaacttaactatt 5789731  T
Q  222 ccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactt 321  Q
     |||||||||||||||||||   ||||||||||||| | |||||||||||||||||| ||||||||||||||||||||  ||||||||||||| |||| |    
T  5789730 tcactaactacaattaataagggtgttttagtaaatgccactaattttactattgaattcaatacaattaatcatttccttaataatcgtgcacaaacct 5789631  T
Q  322 taaacgactaa 332  Q
    |||| ||||||    
T  5789630 taaatgactaa 5789620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 153 - 314
Target Start/End: Original strand, 35313849 - 35314010
Alignment:
Q  153 aatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttag 252  Q
    ||||||| |||||||| || |||| ||||||||||  ||||||||||||||||||| ||||||| |  |||||||||||||||||||||   || ||||     
T  35313849 aatgcaacatttattacttttttccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataaggttgctttaa 35313948  T
Q  253 taaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgca 314  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||  |||||||||||||    
T  35313949 taaatactactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgca 35314010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 150 - 327
Target Start/End: Complemental strand, 34120591 - 34120416
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||  ||||||||||| |||| | ||||||||  ||| ||||||||||||||||||||||| | |||||||||||||||||||||||||  |||    
T  34120591 accaatgcagcatttattatttttttccattattatactcttacttattgaatttcatccaacttaactattccactaactacaattaataaata--ttt 34120494  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacg 327  Q
    ||||||||| ||||| |||||| ||  ||||||| ||||||||||||||   |||||||| |||| ||||||||||||    
T  34120493 tagtaaataatactagttttaccatcaaaatcaacacaattaatcattttcttaataatcatgcataaactttaaacg 34120416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 161 - 331
Target Start/End: Complemental strand, 43115945 - 43115775
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatact 260  Q
    ||||||||||| |||| | ||||||||| |||||  ||||||||||| |||||||| |  ||||||||||||||| |||||   | ||||||||||| ||    
T  43115945 atttattatttttttccattattataccattattcgttgaatttcattcaacttaactactccactaactacaataaataagagtattttagtaaatgct 43115846  T
Q  261 actaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||| ||||  ||||||||||| |||||||||||||||| ||||||||| ||| ||||||||||||||||    
T  43115845 actaactttatcattgaaatcaacacaattaatcatttctttaataatcgcgcacaaactttaaacgacta 43115775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 163 - 328
Target Start/End: Original strand, 17695303 - 17695467
Alignment:
Q  163 ttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactac 262  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |  || |||||||| |||||||||  || |||| ||||||  ||     
T  17695303 ttattattt-tttccactattatacccttatttattgaatttcatccaacttaactactctactaactataattaataagaatatttttgtaaatgatat 17695401  T
Q  263 taattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacga 328  Q
     |||||||| |||||||||||||||||||||||||||  ||||||||||||| |||| ||||||||    
T  17695402 caattttaccattgaaatcaatacaattaatcatttccttaataatcgtgcacaaaccttaaacga 17695467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 150 - 326
Target Start/End: Original strand, 34225549 - 34225725
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    ||||||||| |||||||||||| |||  | ||||||||| ||||||||| |||||||| |||||||| |  |||| ||||||||||||||||   |||||    
T  34225549 accaatgcagtatttattattttttttcattattatacccttatttattaaatttcattcaacttaaatactccattaactacaattaataagggtgttt 34225648  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaac 326  Q
    ||||||||| |||||| ||||| ||| ||||||||| ||||| |||||||  ||||||||||||| |||| ||||||    
T  34225649 tagtaaataatactaagtttaccattaaaatcaatataattattcatttccttaataatcgtgcacaaaccttaaac 34225725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 150 - 292
Target Start/End: Complemental strand, 35242451 - 35242309
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    ||||||||||||||||||||| ||||  |||||||||| |||||||||||||||||||||||||||| |  || |||||||||||||||||||||| ||     
T  35242451 accaatgcaatatttattattagttttcactattatacttttatttattgaatttcatccaacttaactactcaactaactacaattaataaatatattc 35242352  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaa 292  Q
    ||||||||  | |||||||||  ||| ||||||| ||||||||    
T  35242351 tagtaaatgattctaattttaacattaaaatcaacacaattaa 35242309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 152 - 331
Target Start/End: Complemental strand, 14523524 - 14523345
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||||||| ||||||||||  |||| | ||||||| | ||||| ||||||||||||| ||||||| |  |||||||||||||||||||||  || |||||    
T  14523524 caatgcaacatttattattattttccattattatatccttattaattgaatttcatctaacttaactactccactaactacaattaataaggatatttta 14523425  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||  || ||||||||| ||||||||||| ||||  |||||||||  |||||| | |||| ||||||||||||||||    
T  14523424 gtaaatgatattaattttaccattgaaatcaacacaaaaaatcatttccttaataaccttgcataaactttaaacgacta 14523345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 190 - 331
Target Start/End: Original strand, 16805880 - 16806021
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaat 289  Q
    |||| |||| ||||| |||||||||||    |||||||||||||||||||||  || |||||||||||  |||||||||||||||| ||||||| |||||    
T  16805880 ttatctattaaatttaatccaacttaacaactccactaactacaattaataaggatattttagtaaatgatactaattttactattaaaatcaacacaat 16805979  T
Q  290 taatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||||| ||||||||||||| |||| |||||| ||||    
T  16805980 taatcatttctttaataatcgtgcacaaaccttaaactacta 16806021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 190 - 331
Target Start/End: Original strand, 16845161 - 16845302
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaat 289  Q
    |||| |||| ||||| |||||||||||    |||||||||||||||||||||  || |||||||||||  |||||||||||||||| ||||||| |||||    
T  16845161 ttatctattaaatttaatccaacttaacaactccactaactacaattaataaggatattttagtaaatgatactaattttactattaaaatcaacacaat 16845260  T
Q  290 taatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||||| ||||||||||||| |||| |||||| ||||    
T  16845261 taatcatttctttaataatcgtgcacaaaccttaaactacta 16845302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 150 - 331
Target Start/End: Complemental strand, 36354596 - 36354416
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||  ||||||||||| |||| | ||||||||| ||||||||||||||||||||||||||| |  |||||||||||||||||||||   |||||    
T  36354596 accaatgcagaatttattattt-tttccattattataccattatttattgaatttcatccaacttaactactccactaactacaattaataagagtgttt 36354498  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
     | |||||| |||||||||||| ||  ||||||| |||| || |||||||  |||||||||| || |||| ||||| |||||    
T  36354497 caataaataatactaattttaccatcaaaatcaacacaactagtcatttccttaataatcgtacataaaccttaaatgacta 36354416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 190 - 331
Target Start/End: Original strand, 45235580 - 45235721
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaat 289  Q
    ||||||||||||||||||| ||||||| | || || ||||||||||||||||   |||||||||||||  || ||||||||| ||||||||||| |||||    
T  45235580 ttatttattgaatttcatcaaacttaactatttcattaactacaattaataagggtgttttagtaaatgatattaattttaccattgaaatcaacacaat 45235679  T
Q  290 taatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
     |||||||||  ||||||||||||| |||| |||||||||||    
T  45235680 caatcatttccttaataatcgtgcacaaaccttaaacgacta 45235721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 161 - 331
Target Start/End: Original strand, 37322399 - 37322569
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatact 260  Q
    ||||||||||| |||| | ||||||||| ||||||||||||||||||| ||||||| |  |||||||||||||||||||||   | ||||| |||||  |    
T  37322399 atttattattt-tttccattattatacccttatttattgaatttcatctaacttaactactccactaactacaattaataagggtattttaataaatgat 37322497  T
Q  261 actaattttactattgaaatcaatacaattaatca-tttctataataatcgtgcaaaaactttaaacgacta 331  Q
    | ||||||||| ||||||||||| ||||| ||||| ||||  ||||||||||||| |||| |||||||||||    
T  37322498 attaattttaccattgaaatcaacacaatcaatcattttccttaataatcgtgcataaaccttaaacgacta 37322569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 153 - 331
Target Start/End: Original strand, 43410388 - 43410566
Alignment:
Q  153 aatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttag 252  Q
    ||||||| ||||||||||| |||| | ||||||||  | |||||||||||||||| |||||||| |  |||| ||||||||||||||||  || ||||||    
T  43410388 aatgcaacatttattatttttttccattattatactctcatttattgaatttcattcaacttaactactccattaactacaattaataaggatattttag 43410487  T
Q  253 taaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||  || ||||||||  ||||| ||||| ||||||||| |||||  ||||||||||||| |||| ||||| |||||    
T  43410488 taaatgatattaattttatcattgatatcaacacaattaataatttccttaataatcgtgcacaaacattaaaggacta 43410566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 178 - 328
Target Start/End: Complemental strand, 16377786 - 16377632
Alignment:
Q  178 actattatacctttatttattgaatttcatccaacttaattgt----tccactaactacaattaataaatatgttttagtaaatactactaattttacta 273  Q
    |||||||||| ||||||||||||||||||||||||||||||      |||||||||||||||||||||   | |||| ||||||  || ||||||||| |    
T  16377786 actattatacttttatttattgaatttcatccaacttaattaactactccactaactacaattaataaggttattttggtaaatgatattaattttacca 16377687  T
Q  274 ttgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacga 328  Q
    ||| |||||| |||||||||||||||| ||||||||||||| |||  ||||||||    
T  16377686 ttgtaatcaacacaattaatcatttctttaataatcgtgcacaaatcttaaacga 16377632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 163 - 331
Target Start/End: Original strand, 16463662 - 16463829
Alignment:
Q  163 ttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactac 262  Q
    ||||||||| |||| | |||| |||| ||||||||| ||||||||| ||||| | |  |||||||||||||||||||||   |||||||||||||  |||    
T  16463662 ttattattt-tttccattattttaccattatttattaaatttcatcaaactttactactccactaactacaattaataagggtgttttagtaaatgatac 16463760  T
Q  263 taattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||| ||  ||||||| |||||||||||||||  |||||| |||||| |||| |||||||||||    
T  16463761 taattttaccatcaaaatcaacacaattaatcatttccttaataaccgtgcataaaccttaaacgacta 16463829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 150 - 332
Target Start/End: Complemental strand, 3323426 - 3323258
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||  ||||||||||| || | ||||||| ||  ||| ||||||||||||||||||||||| |  ||||||||||||||||||||||| |        
T  3323426 accaatgcagcatttattattttttcccactattacactcttacttattgaatttcatccaacttaactactccactaactacaattaataaatgt---- 3323331  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
              |||||||||||| ||||||||||| |||||||||||||| ||||||||||||||| |||| ||||||||||||    
T  3323330 ----------tactaattttaccattgaaatcaacacaattaatcatttttataataatcgtgcacaaaccttaaacgactaa 3323258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 185 - 331
Target Start/End: Complemental strand, 31448812 - 31448666
Alignment:
Q  185 tacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaat-actactaattttactattgaaatcaa 283  Q
    |||| ||||||||||||||||||||||||||| | || |||||||| |||||| |||   ||||||||||||| ||| |||||||||| ||  |||||||    
T  31448812 tacccttatttattgaatttcatccaacttaactatttcactaactgcaattagtaagggtgttttagtaaatgact-ctaattttaccatcaaaatcaa 31448714  T
Q  284 tacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
     |||||||||||||||  ||||||||||||| |||| |||||||||||    
T  31448713 cacaattaatcatttccttaataatcgtgcacaaaccttaaacgacta 31448666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 161 - 328
Target Start/End: Original strand, 39691460 - 39691627
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatact 260  Q
    ||||||||||  |||| | ||||||||| |||||||||||||||||| |||||| | |  |||||||||| ||||||||||   | |||||||||||  |    
T  39691460 atttattattattttccattattatacccttatttattgaatttcattcaactttactactccactaactgcaattaataagagtattttagtaaatgat 39691559  T
Q  261 actaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacga 328  Q
    | ||||||||  ||||||||||| ||||||||||||||   ||||||||||||| |||| ||||||||    
T  39691560 attaattttatcattgaaatcaacacaattaatcattttcttaataatcgtgcacaaaccttaaacga 39691627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 188 - 311
Target Start/End: Complemental strand, 17346478 - 17346356
Alignment:
Q  188 ctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaataca 287  Q
    |||||||||||||||||| |||||||||| |  |||||||||||||||||||||| || ||||| |||||  || |||||||||| |||||||||| | |    
T  17346478 ctttatttattgaatttcttccaacttaactactccactaactacaattaataaaaatattttaataaatgatattaattttacttttgaaatcaaaata 17346379  T
Q  288 attaatcatttctataataatcgt 311  Q
    |||||| |||||| ||||||||||    
T  17346378 attaat-atttctttaataatcgt 17346356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 150 - 331
Target Start/End: Original strand, 25637439 - 25637620
Alignment:
Q  150 accaatgcaatatttattatttgttt-caactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtt 248  Q
    |||||||||  ||||||||||| ||| | | ||||| ||| ||||||||| ||||||||||||||||| |  |||  |||||||||||||||||  ||||    
T  25637439 accaatgcagcatttattattttttttccattattacacccttatttattaaatttcatccaacttaactactcctataactacaattaataaaggtgtt 25637538  T
Q  249 ttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||||||   ||||||||||| ||  ||||||| |||||||||||||||  | ||||||||||| |||| |||||| ||||    
T  25637539 ttagtaaatgacactaattttaccatcaaaatcaacacaattaatcatttc-cttataatcgtgcataaaccttaaacaacta 25637620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 161 - 319
Target Start/End: Complemental strand, 28170726 - 28170568
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatact 260  Q
    ||||||||||| |||  ||||||||||  |||||||| ||||||||||||| |||||| ||| | |||||||||||||||||  |||  |||||||| |     
T  28170726 atttattattttttttcactattatactcttatttatagaatttcatccaatttaattattctattaactacaattaataaagctgtactagtaaatgca 28170627  T
Q  261 actaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaac 319  Q
    |||||||||||  |||||||||| | |||||||||||| |  |||| ||||||| ||||    
T  28170626 actaattttacccttgaaatcaacataattaatcattttttaaatactcgtgcacaaac 28170568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 150 - 331
Target Start/End: Original strand, 39785544 - 39785728
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||  ||||| ||||| || | | ||| ||||| |||||||||||| |||||||||||||| |  |||| ||||||||||||||||   |||||    
T  39785544 accaatgcagcatttactattttttcccattataatacccttatttattgaacttcatccaacttaactactccattaactacaattaataagagtgttt 39785643  T
Q  250 tagtaa---atactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||   ||| |||||||||||| ||  ||||||| |||||||||||||||  |||||| ||||||  ||| |||||||||||    
T  39785644 tagtaaatgatagtactaattttaccatcaaaatcaacacaattaatcatttccttaataaccgtgcatcaaccttaaacgacta 39785728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 150 - 331
Target Start/End: Original strand, 36794243 - 36794424
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||  ||||||||||| |||  | ||| ||||| |||||||||||| |||||||||||||| |  ||||||||||||| |||||||    ||||    
T  36794243 accaatgcagcatttattattttttttcattataatacccttatttattgaacttcatccaacttaactactccactaactacagttaataagggcgttt 36794342  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||||   |||||||||||| ||  ||||||| |||||||||||||||  |||||| | ||||  ||  |||||||||||    
T  36794343 tagtaaaagatactaattttaccatcaaaatcaacacaattaatcatttccttaataaccatgcatcaatcttaaacgacta 36794424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 331
Target Start/End: Complemental strand, 15359207 - 15359060
Alignment:
Q  184 atacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaa 283  Q
    ||||| |||||||||||| |||||||||||||| |  |||||||||||||||||||||   |||||||||||||  || ||||||||  ||  |||||||    
T  15359207 atacccttatttattgaacttcatccaacttaactactccactaactacaattaataagggtgttttagtaaatgatattaattttatcatcaaaatcaa 15359108  T
Q  284 tacaattaatcat-ttctataataatcgtgcaaaaactttaaacgacta 331  Q
     |||||||||||| |||| |||||| ||||||  ||| |||||||||||    
T  15359107 cacaattaatcatcttct-taataaccgtgcatcaaccttaaacgacta 15359060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 161 - 332
Target Start/End: Complemental strand, 39329805 - 39329633
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatact 260  Q
    ||||||||||| |||| |||||| || | |||||||||||||||||||||| |||| |  |||| ||||||||||||||||   ||||||||||||| ||    
T  39329805 atttattattt-tttccactattgtatcgttatttattgaatttcatccaatttaactactcca-taactacaattaataagagtgttttagtaaatgct 39329708  T
Q  261 actaattttactattgaaatcaat--acaattaatcatttctataataatcgtgca-aaaactttaaacgactaa 332  Q
    | ||||||||  ||||||||||||  |||||| |||||||   ||  ||||||||| ||||| ||||||||||||    
T  39329707 attaattttatcattgaaatcaatacacaattgatcattttcttagaaatcgtgcacaaaacgttaaacgactaa 39329633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 247 - 331
Target Start/End: Original strand, 19937733 - 19937817
Alignment:
Q  247 ttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||||||||  || ||||||||| ||||||||||| |||||||||||||||  ||||||||||||| |||| |||||||||||    
T  19937733 ttttagtaaatgatattaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgacta 19937817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 5272289 - 5272204
Alignment:
Q  153 aatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaat 239  Q
    ||||||| ||||||||||| || | | ||||||||| |||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  5272289 aatgcaacatttattattt-ttcccattattatacccttatttattgaatttcatccaatttaattactccactaactacaattaat 5272204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 180 - 298
Target Start/End: Complemental strand, 34451459 - 34451341
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    |||||| ||||||||||||||||||||||||||| || | || || |||||| ||||||| || || |||||||||||| ||||||||||   || ||||    
T  34451459 tattatgcctttatttattgaatttcatccaactaaactatttcaataactagaattaatgaaaatattttagtaaataatactaattttctcatcgaaa 34451360  T
Q  280 tcaatacaattaatcattt 298  Q
    |||| | ||||||| ||||    
T  34451359 tcaacataattaataattt 34451341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 178 - 298
Target Start/End: Complemental strand, 43699722 - 43699605
Alignment:
Q  178 actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattga 277  Q
    ||||||||||| || |||||||||||| |||||||||||||  ||||||||    ||||||||  | | ||||| |||||  ||||||||||||||||||    
T  43699722 actattatacccttgtttattgaattttatccaacttaattactccactaaa---aattaataggtgtattttaataaatgatactaattttactattga 43699626  T
Q  278 aatcaatacaattaatcattt 298  Q
    |||||| ||| ||||||||||    
T  43699625 aatcaacacagttaatcattt 43699605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 258
Target Start/End: Complemental strand, 26863489 - 26863404
Alignment:
Q  173 tttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaata 258  Q
    |||| |||||||||| |||||||| |||||||||||| |||||| |  ||||||||||||||||||||||  ||||||| ||||||    
T  26863489 tttccactattatacatttatttaatgaatttcatccgacttaactactccactaactacaattaataaaagtgttttaataaata 26863404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 9458419 - 9458329
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataa 241  Q
    |||||||||  ||||||||||| |||| | ||||||||| ||||||||| ||||||||||||||| | |  |||||||||||||||||||||    
T  9458419 accaatgcagcatttattattt-tttccattattatacccttatttattaaatttcatccaactttactactccactaactacaattaataa 9458329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 184 - 332
Target Start/End: Complemental strand, 11742648 - 11742501
Alignment:
Q  184 atacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaa 283  Q
    ||||| |||||||||||| |||||| ||||||| |  |||| ||||||||||||||||   ||||||| |||||| || | | ||||| ||  |||||||    
T  11742648 atacccttatttattgaacttcatcaaacttaactactccattaactacaattaataagggtgttttaataaataatattga-tttaccatcaaaatcaa 11742550  T
Q  284 tacaatt-aatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    ||||||| ||  |||||| ||||||||||||| |||| ||||||||||||    
T  11742549 tacaattaaaaaatttct-taataatcgtgcataaacgttaaacgactaa 11742501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 19937374 - 19937435
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataa 241  Q
    ||||||||||||||||||||||||| || |||||||| |  |||||||||||||||||||||    
T  19937374 tattatacctttatttattgaattttattcaacttaactactccactaactacaattaataa 19937435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 276
Target Start/End: Complemental strand, 32831296 - 32831203
Alignment:
Q  183 tatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattg 276  Q
    |||||| |||||||||||||||||||  | |||| |  |||| ||||||||||||||||| ||||||||||||||  || ||||||||| ||||    
T  32831296 tataccattatttattgaatttcatctcatttaactactccaataactacaattaataaagatgttttagtaaatgatattaattttaccattg 32831203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 296
Target Start/End: Complemental strand, 41221058 - 41220954
Alignment:
Q  192 atttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaatta 291  Q
    |||||||||| ||||||  |||||| |  | || ||||||||||||||||| || ||||| |||||  |||||||||||  ||||||||||| |||||||    
T  41221058 atttattgaacttcatctgacttaactacttcattaactacaattaataaaaatattttaataaatgatactaattttataattgaaatcaacacaatta 41220959  T
Q  292 atcat 296  Q
    |||||    
T  41220958 atcat 41220954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 1206781 - 1206709
Alignment:
Q  226 taactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcattt 298  Q
    ||||||||||||||||  || |||||||||||  |||||||||||| | ||||||||| | ||||||||||||    
T  1206781 taactacaattaataaggatattttagtaaatgttactaattttaccactgaaatcaacataattaatcattt 1206709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 190 - 331
Target Start/End: Complemental strand, 18853315 - 18853173
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaatt--ttactattgaaatcaataca 287  Q
    |||||||||||||||||||||| ||||||  || ||||||||||| ||||||   | |||| ||||||  ||| ||||  |||  ||||||||||| |||    
T  18853315 ttatttattgaatttcatccaaattaattactctactaactacaactaataagagtattttggtaaatgatac-aattaattatcattgaaatcaacaca 18853217  T
Q  288 attaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||| |||||  |||  |||||||| ||| ||||||||||||    
T  18853216 attaattatttccttaaagatcgtgcacaaattttaaacgacta 18853173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 270
Target Start/End: Original strand, 19444107 - 19444225
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||||||| ||||||||||| |||  | ||||||||| || ||||||||| || ||||| ||||| |  || ||||| ||||||||||||  |  |||||    
T  19444107 caatgcaacatttattatttttttacattattatacccttgtttattgaaatttatccatcttaactactcgactaattacaattaataataacatttta 19444206  T
Q  252 gtaaatactactaatttta 270  Q
    ||||||| || ||||||||    
T  19444207 gtaaataatattaatttta 19444225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 326
Target Start/End: Complemental strand, 26608008 - 26607946
Alignment:
Q  264 aattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaac 326  Q
    |||||||| ||||||||||| ||||||||||||||   ||||||||||||| |||| ||||||    
T  26608008 aattttaccattgaaatcaacacaattaatcattttcttaataatcgtgcacaaaccttaaac 26607946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 7494962 - 7494909
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactaca 233  Q
    ||||||||| ||||||||||||||||||||||||||| |  ||| |||||||||    
T  7494962 tattatacccttatttattgaatttcatccaacttaactactccgctaactaca 7494909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 161 - 312
Target Start/End: Original strand, 19426428 - 19426577
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatact 260  Q
    ||||||||||| || | ||||||||||| || |||||  || || ||||||||||| |  || ||| ||||||||||||||  || |||||||||||  |    
T  19426428 atttattattt-ttcccactattataccgttgtttat--aactttatccaacttaactactcgacttactacaattaataatgatattttagtaaatgtt 19426524  T
Q  261 actaattttactattg-aaatcaatacaattaatcatttctataataatcgtg 312  Q
     |||||||||  |||| ||||||| ||||||||||||||| || | |||||||    
T  19426525 gctaattttatcattgaaaatcaacacaattaatcatttcaattaaaatcgtg 19426577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 36173488 - 36173424
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaat 217  Q
    |||||||  ||||||||||  ||||||||||||||| |||||||||||||||||||  ||||||||    
T  36173488 caatgcatcatttattatta-tttcaactattatacttttatttattgaatttcattaaacttaat 36173424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 332
Target Start/End: Original strand, 39443789 - 39443854
Alignment:
Q  267 tttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    ||||||||||||||||| | ||||||||||||   ||||||| ||||| |||| ||||||||||||    
T  39443789 tttactattgaaatcaacaaaattaatcattttcttaataattgtgcacaaaccttaaacgactaa 39443854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 7438995 - 7438940
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaa 216  Q
    |||||||||||  | | ||||||||||| |||||||||||||||||| ||||||||    
T  7438995 atttattattttgtcccactattatacccttatttattgaatttcattcaacttaa 7438940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 298
Target Start/End: Complemental strand, 10005197 - 10005130
Alignment:
Q  231 acaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcattt 298  Q
    |||||||||||| || |||||||||||  ||||||||||| |  ||||||||| |||||| |||||||    
T  10005197 acaattaataaagatattttagtaaatgatactaattttattgctgaaatcaacacaattgatcattt 10005130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 298
Target Start/End: Original strand, 32783404 - 32783471
Alignment:
Q  231 acaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcattt 298  Q
    ||||||||||||  |||||||||||||  || ||||||||||||  |||| || ||||||||||||||    
T  32783404 acaattaataaaggtgttttagtaaatgatattaattttactatcaaaataaacacaattaatcattt 32783471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 25904757 - 25904815
Alignment:
Q  161 atttattatt-tgtttcaactattatacctttatttattgaatttcatccaacttaatt 218  Q
    |||||||||| | |||| ||||||||||| | |||||||||||||||| ||||||||||    
T  25904757 atttattattatttttccactattataccctaatttattgaatttcattcaacttaatt 25904815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 108
Target Start/End: Original strand, 35313782 - 35313812
Alignment:
Q  78 cgtctcacaattattgtctctttaacatttt 108  Q
    |||||||||||||||||||||||||||||||    
T  35313782 cgtctcacaattattgtctctttaacatttt 35313812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 16028278 - 16028330
Alignment:
Q  153 aatgcaatatttattatttgtttcaactattatacctttatttattgaatttca 206  Q
    ||||||| |||||| |||| ||||| ||||||||| ||||||||||||||||||    
T  16028278 aatgcaacatttataatttttttca-ctattatacatttatttattgaatttca 16028330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 329
Target Start/End: Complemental strand, 27501582 - 27501513
Alignment:
Q  260 tactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgac 329  Q
    |||||||||||| ||||||||||| | |||| ||||||||  |||||||| | || |||| |||||||||    
T  27501582 tactaattttaccattgaaatcaacataatttatcatttccttaataatcatacacaaaccttaaacgac 27501513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 122 - 332
Target Start/End: Complemental strand, 34197 - 33993
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgtt 221  Q
    |||| ||||||||||||||||||     | |||||||  ||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||| | ||    
T  34197 caaaataattgtcactttacaat-----atcaatgcatcatttattattt-tttccactattataccattatttattgaatttcatccaacttaactatt 34104  T
Q  222 ccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactt 321  Q
     |||||||||||||||||||   ||||||||||||| | |||||||||||||||||| ||||||||||||||||||||  ||||||||||||| |||| |    
T  34103 tcactaactacaattaataagggtgttttagtaaatgccactaattttactattgaattcaatacaattaatcatttccttaataatcgtgcacaaacct 34004  T
Q  322 taaacgactaa 332  Q
    |||| ||||||    
T  34003 taaatgactaa 33993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 1e-50; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 127 - 328
Target Start/End: Original strand, 34360596 - 34360792
Alignment:
Q  127 taattgtcactttacaatgcaacaccaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccact 226  Q
    ||||||||||||||||||     ||||||  || |||| || ||| |||| ||||||||||| ||||||||||||||| || |||||||| |  ||||||    
T  34360596 taattgtcactttacaat-----accaatttaacattttttttttttttccactattatacccttatttattgaattttattcaacttaactactccact 34360690  T
Q  227 aactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaac 326  Q
    |||||||||||||||   ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  34360691 aactacaattaataagagtgttttagtaaatgctactaattttaccattgaaatcaatacaattaatcatttctttaataatcgtgcacaaactttaaac 34360790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 6643799 - 6643640
Alignment:
Q  173 tttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttact 272  Q
    |||| ||||||||||| ||||||||||||||||||||||||||| | | ||||||||||||||||||||| |||||||||||||| |||||||||||||     
T  6643799 tttccactattatacccttatttattgaatttcatccaacttaactataccactaactacaattaataaagatgttttagtaaatgctactaattttacc 6643700  T
Q  273 attgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    ||||||||||| |||||||||||||||  ||||||||||||  |||| |||||| |||||    
T  6643699 attgaaatcaacacaattaatcatttccttaataatcgtgctcaaacattaaactactaa 6643640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 152 - 332
Target Start/End: Complemental strand, 7061824 - 7061644
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||| ||| ||||||||||| |||  ||||||||||| |||||||||||||||||| ||||||||||  |||||||||||||||||||||| || || ||    
T  7061824 caatacaacatttattatttattttcactattatacccttatttattgaatttcattcaacttaattaatccactaactacaattaataaagatattata 7061725  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    ||||||  |||||||||||| ||||||||||| |||||||||||||||  ||||||||||| | |||| ||||||||||||    
T  7061724 gtaaatgatactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgtacaaaccttaaacgactaa 7061644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 150 - 332
Target Start/End: Complemental strand, 47464528 - 47464345
Alignment:
Q  150 accaatgcaatatttattatttgttt-caactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtt 248  Q
    ||||||||| |||||||||||| ||| | ||||||||||| ||||||||||||||||||||||||||| |  ||||| |||||||||||||||   | ||    
T  47464528 accaatgcattatttattattttttttccactattatacccttatttattgaatttcatccaacttaactactccaccaactacaattaataagagtttt 47464429  T
Q  249 ttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||||||||||  ||||||||||||  |||| ||||||||||||    
T  47464428 ttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgctcaaaccttaaacgactaa 47464345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 152 - 331
Target Start/End: Complemental strand, 49428502 - 49428323
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||||||| |||||||| || |||| | ||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||   | |||||    
T  49428502 caatgcaacatttattacttttttccattattatacccttatttattgaatttcatccaacttaattactccactaactacaattaataagggtatttta 49428403  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||  || ||||||||| ||||||||||| |||| ||||||||||  |||||||||||||||||| |||||||||||    
T  49428402 gtaaattatattaattttaccattgaaatcaacacaaataatcatttccttaataatcgtgcaaaaaccttaaacgacta 49428323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 150 - 332
Target Start/End: Original strand, 22130001 - 22130188
Alignment:
Q  150 accaatgcaatatttattatttgttt-caactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtt 248  Q
    |||||||||| ||||||||||| ||| | | |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||  |||||    
T  22130001 accaatgcaacatttattattttttttccattattatacctttatttattgaatttcatccaacttaattactccactaactacaattaataaggatgtt 22130100  T
Q  249 ttagtaaatactactaattttactattgaaatca----atacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    || ||||||  |||||||| ||| ||||||||||    |||||||||||||||||  |||||| |||||| |||| ||||||||||||    
T  22130101 tttgtaaatgatactaattataccattgaaatcaacacatacaattaatcatttccttaataaccgtgcacaaaccttaaacgactaa 22130188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 122 - 327
Target Start/End: Complemental strand, 35311410 - 35311208
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatatttattatt--tgtttcaactattatacctttatttattgaatttcatccaacttaattg 219  Q
    |||| ||||||||||||||||||     |||||||||| ||||||||||  | |||| | |||||||||||||||||||||||||||||||||||||||     
T  35311410 caaaataattgtcactttacaat-----accaatgcaacatttattattattttttccaatattatacctttatttattgaatttcatccaacttaatta 35311316  T
Q  220 ttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaac 319  Q
     |||||||||||||||||||||   |||| |||||||| | | ||||||||| |||||||| || | |||||||||||||  ||||||||||||| ||||    
T  35311315 ctccactaactacaattaataagagtgttctagtaaatgcaattaattttaccattgaaattaacataattaatcatttccttaataatcgtgcacaaac 35311216  T
Q  320 tttaaacg 327  Q
     |||||||    
T  35311215 cttaaacg 35311208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 163 - 332
Target Start/End: Original strand, 43237216 - 43237384
Alignment:
Q  163 ttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactac 262  Q
    ||||||||| ||||| |||||||||  ||||||||||||||||||||||||||| |  | ||||||||| |||||||||  || |||||||||||| |||    
T  43237216 ttattatttttttca-ctattatacacttatttattgaatttcatccaacttaactacttcactaactataattaataatgattttttagtaaatattac 43237314  T
Q  263 taattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    ||||||||| |||||||| || |||||||||||||||  ||||||||||||| |||| ||||||||||||    
T  43237315 taattttaccattgaaataaacacaattaatcatttccttaataatcgtgcataaaccttaaacgactaa 43237384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 152 - 331
Target Start/End: Complemental strand, 38405263 - 38405083
Alignment:
Q  152 caatgcaatatttatta-tttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttt 250  Q
    |||||||| |||||||| ||| |||| | ||||||||||||||||||||||||||||||||||||| |   ||||||||||||||||||||   | ||||    
T  38405263 caatgcaacatttattactttttttccattattatacctttatttattgaatttcatccaacttaactacaccactaactacaattaataagggtatttt 38405164  T
Q  251 agtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||||  || ||||||||| ||| ||||||| | |||||||||||||  ||||||||||||| |||| |||||||||||    
T  38405163 agtaaatgatattaattttaccatttaaatcaacagaattaatcatttccttaataatcgtgcacaaaccttaaacgacta 38405083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 160 - 331
Target Start/End: Complemental strand, 17237448 - 17237277
Alignment:
Q  160 tatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatac 259  Q
    ||||||||| || |||| ||||||||||| ||||||||||||||||||||||||||| |  |||||||||||||||||||||   |||||||||||||      
T  17237448 tatttattagttttttccactattatacccttatttattgaatttcatccaacttaactactccactaactacaattaataaggttgttttagtaaatgt 17237349  T
Q  260 tactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||||||||| |||| |||||| ||||||||| ||||   |||||||| |||| |||| ||||| |||||    
T  17237348 tactaattttaccattgcaatcaacacaattaattattttcttaataatcatgcacaaaccttaaatgacta 17237277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 32884783 - 32884942
Alignment:
Q  173 tttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttact 272  Q
    |||| ||||||||| | |||||||||||||| |||||||||||| |  |||||||||||||||||||||   ||||||| ||||| ||||||||| |||     
T  32884783 tttccactattatatccttatttattgaattccatccaacttaactactccactaactacaattaataagagtgttttactaaatgctactaattctacc 32884882  T
Q  273 attgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    ||||||||||| ||||||||||||||   ||||||||||||| |||| ||||||||||||    
T  32884883 attgaaatcaacacaattaatcattttcttaataatcgtgcacaaaccttaaacgactaa 32884942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 122 - 314
Target Start/End: Original strand, 49746896 - 49747083
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatatttattatt-tgtttcaactattatacctttatttattgaatttcatccaacttaattgt 220  Q
    |||| ||||||||||||||||||     |||||||||| |||||||||| | |||| | ||||||||| ||||||||||||||||||||||||||| |      
T  49746896 caaaataattgtcactttacaat-----accaatgcaacatttattattatttttccattattatacccttatttattgaatttcatccaacttaactac 49746990  T
Q  221 tccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgca 314  Q
    || |||||||| ||||||| ||  | ||||||||||||||||||||||||  ||||||||||| ||||||||| |||| | |||||||||||||    
T  49746991 tcaactaactataattaatgaaggtattttagtaaatactactaattttatcattgaaatcaacacaattaattattt-tttaataatcgtgca 49747083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 153 - 328
Target Start/End: Original strand, 6609722 - 6609898
Alignment:
Q  153 aatgcaatatttattatttgttt-caactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    ||||||| ||||||||||| ||| | | ||||||||  ||||||||||| ||||||||||||||| |  |||| ||| ||||||||||||| |||||||     
T  6609722 aatgcaacatttattattttttttccattattatactcttatttattgagtttcatccaacttaactactccaataattacaattaataaagatgttttt 6609821  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacga 328  Q
    ||||||  |||||||||||| ||  ||||||| |||||||||||||||  ||||||||||||| |||||||||||||    
T  6609822 gtaaatgatactaattttaccatcaaaatcaacacaattaatcatttccttaataatcgtgcataaactttaaacga 6609898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 150 - 332
Target Start/End: Complemental strand, 16821494 - 16821311
Alignment:
Q  150 accaatgcaatatttattatt-tgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtt 248  Q
    |||||||||  |||||||||| | |||  ||||||||||| |||||||||||||||||| |||||||| |  ||||||||||| |||||||||  || ||    
T  16821494 accaatgcagcatttattattatttttgcactattatacccttatttattgaatttcattcaacttaaatactccactaactataattaataaggatatt 16821395  T
Q  249 ttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
     ||||||||  |||||||||||  ||||||||||| ||||||||||||| |  ||||||||||||| |||| ||||||||||||    
T  16821394 atagtaaatgatactaattttatcattgaaatcaacacaattaatcattgcattaataatcgtgcacaaaccttaaacgactaa 16821311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 150 - 312
Target Start/End: Complemental strand, 35380496 - 35380333
Alignment:
Q  150 accaatgcaatatttattatttgttt-caactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtt 248  Q
    |||||||||| ||||||||||| ||| | | ||||||||  |||||||||||||||||||||||||||    |||||||||||||||||||||  |||||    
T  35380496 accaatgcaacatttattattttttttccattattatactcttatttattgaatttcatccaacttaaccactccactaactacaattaataatgatgtt 35380397  T
Q  249 ttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtg 312  Q
    ||||||||| ||||||||||||| ||| ||||||| | ||||||||||||   |||||||||||    
T  35380396 ttagtaaatgctactaattttaccattaaaatcaacataattaatcattttcttaataatcgtg 35380333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 150 - 332
Target Start/End: Complemental strand, 40123017 - 40122834
Alignment:
Q  150 accaatgcaatatttattatttgtttca-actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtt 248  Q
    |||||||||| ||||||||||| ||||  || ||| |||| |||||||||||||||| || ||||||| || ||||||||||||||| |||||   ||||    
T  40123017 accaatgcaacatttattatttttttcccaccattgtacccttatttattgaatttcgtcgaacttaactgctccactaactacaatcaataagggtgtt 40122918  T
Q  249 ttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    ||||||||| ||||||||||||  ||| |||||||  ||||||||||||||  ||||||||||||| |||  ||||||||||||    
T  40122917 ttagtaaatgctactaattttaacattaaaatcaacgcaattaatcatttccttaataatcgtgcacaaagcttaaacgactaa 40122834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 153 - 331
Target Start/End: Complemental strand, 42617062 - 42616884
Alignment:
Q  153 aatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttag 252  Q
    ||||||| ||||||||||  |||| | ||||||||  |||||||||||||||||| | |||||| |  |||||| ||||||||||||||| || ||||||    
T  42617062 aatgcaacatttattattattttccattattatacacttatttattgaatttcattcgacttaactactccacttactacaattaataaaaatattttag 42616963  T
Q  253 taaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||  || ||||||||| ||||||||||| ||| |||||||||||| |||||||| |||| |||  |||||||||||    
T  42616962 taaatgatattaattttaccattgaaatcaacacagttaatcatttctttaataatcatgcacaaaacttaaacgacta 42616884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 150 - 331
Target Start/End: Complemental strand, 11907761 - 11907580
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||  ||||||||||| |||| | ||| |||| ||||||||||||| |||||||||||||| |  |||| ||||||||||||||||   |||||    
T  11907761 accaatgcagcatttattatttttttccattataatacatttatttattgaacttcatccaacttaactactccaataactacaattaataagggtgttt 11907662  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||  |||||||||||| ||  ||||||| |||||||||||||||  |||||||||||||  ||| ||||| |||||    
T  11907661 tagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttccttaataatcgtgcattaaccttaaatgacta 11907580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 178 - 294
Target Start/End: Original strand, 53412095 - 53412211
Alignment:
Q  178 actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattga 277  Q
    |||||||||| |||||||||||||||||||||||||||| | |||||| ||||| |||||||||| || |||||||||||  |||||||||||| |||||    
T  53412095 actattatacttttatttattgaatttcatccaacttaactattccacaaactataattaataaaaatattttagtaaatgatactaattttaccattga 53412194  T
Q  278 aatcaatacaattaatc 294  Q
    |||||||| ||||||||    
T  53412195 aatcaataaaattaatc 53412211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 180 - 331
Target Start/End: Original strand, 2066778 - 2066929
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||||||||||||||||||||||| ||||||| |   |||||||||| |||||||||   ||||||| |||||| |||||| ||||| ||  |||    
T  2066778 tattatacctttatttattgaatttcatctaacttaactaccccactaactaaaattaataagggtgttttaataaataatactaactttaccatcaaaa 2066877  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||| |||||||||||||||  ||||||||||||| |||| |||||||||||    
T  2066878 tcaacacaattaatcatttccttaataatcgtgcataaaccttaaacgacta 2066929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 180 - 331
Target Start/End: Complemental strand, 33790863 - 33790712
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||| ||||||||||||||||||||||||||| |  |||||||||||||||||||||   |||||||| ||||   ||||||||||| ||  |||    
T  33790863 tattatacccttatttattgaatttcatccaacttaactactccactaactacaattaataagggtgttttagcaaatgaaactaattttaccatcaaaa 33790764  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||| ||||||||||||||   ||||||||||||| |||| |||||||||||    
T  33790763 tcaacacaattaatcattttcttaataatcgtgcataaaccttaaacgacta 33790712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 36985776 - 36985894
Alignment:
Q  181 attatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaat 280  Q
    |||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||    | |||||||||||  |||||||||||| ||||||||    
T  36985776 attatacccttatttattgaatttcatccaacttaattattctactaactacaattaatacgggtattttagtaaatgatactaattttaccattgaaat 36985875  T
Q  281 caatacaattaatcatttc 299  Q
    ||| |||||||||||||||    
T  36985876 caacacaattaatcatttc 36985894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 163 - 332
Target Start/End: Complemental strand, 2942793 - 2942625
Alignment:
Q  163 ttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactac 262  Q
    ||||||||| |||| ||||||||| |||| ||||||||| ||||| ||||||||    |||||||||||||||||||||   ||||||||||||| ||||    
T  2942793 ttattatttttttccactattatatctttgtttattgaaattcattcaacttaaccactccactaactacaattaataagg-tgttttagtaaatgctac 2942695  T
Q  263 taattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    ||||||||  || |||||||| |||||||||||||||| |||||||| |  | |||| ||||||||||||    
T  2942694 taattttatcatcgaaatcaacacaattaatcatttctttaataatcttatacaaaccttaaacgactaa 2942625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 173 - 326
Target Start/End: Complemental strand, 44536334 - 44536182
Alignment:
Q  173 tttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttact 272  Q
    |||| ||||||||||| |||||| |||||||||||| ||||||  |  |||||||||||||||||||||   ||||||| ||||| || ||||||||||     
T  44536334 tttccactattatacccttattt-ttgaatttcatctaacttagctactccactaactacaattaataagggtgttttaataaatcctgctaattttacc 44536236  T
Q  273 attgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaac 326  Q
    ||| ||||||| |||||||||||||||  ||||||||||||| |||||||||||    
T  44536235 attaaaatcaacacaattaatcatttccttaataatcgtgcataaactttaaac 44536182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 150 - 331
Target Start/End: Complemental strand, 47773181 - 47773000
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||  ||||||||||| |||| | ||| ||||| |||||||||||| |||||||||||||| |  |||||||||||||||||||||   |||||    
T  47773181 accaatgcagcatttattatttttttccattataatacccttatttattgaacttcatccaacttaactactccactaactacaattaataagggtgttt 47773082  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||  |||||||||||| ||  ||||||| ||||||||| |||||  ||||||  |||||  ||| |||||||||||    
T  47773081 tagtaaatgatactaattttaccatcaaaatcaacacaattaattatttccttaataactgtgcatcaaccttaaacgacta 47773000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 154 - 331
Target Start/End: Original strand, 3689525 - 3689702
Alignment:
Q  154 atgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagt 253  Q
    |||||| ||||||||||  |||| | ||||||||| ||||| ||| ||||||||| |||||||    || |||||||| |||||||||   |||||||||    
T  3689525 atgcaacatttattattattttccattattatacccttattaatttaatttcatctaacttaacaactcaactaactataattaataagagtgttttagt 3689624  T
Q  254 aaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||  |||||||||||| ||  |||||||||||||||||||||||| |||||| ||| || |||| |||||||||||    
T  3689625 aaatgatactaattttaccatcaaaatcaatacaattaatcatttctttaataaccgtacataaaccttaaacgacta 3689702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 162 - 331
Target Start/End: Original strand, 17114411 - 17114580
Alignment:
Q  162 tttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatacta 261  Q
    |||||||||| |||| | ||| |||||||||||||||||| ||| ||||| |||| |  |||||||||||||||||||||   |||||||||||||  ||    
T  17114411 tttattatttttttccattataatacctttatttattgaacttcctccaaattaactactccactaactacaattaataagggtgttttagtaaatgata 17114510  T
Q  262 ctaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||||||| ||  ||||||| |||||||||||||||  ||||||  |||||  ||| |||||||||||    
T  17114511 ctaattttaccatcaaaatcaacacaattaatcatttccttaataactgtgcatcaaccttaaacgacta 17114580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 150 - 331
Target Start/End: Complemental strand, 52859956 - 52859780
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||| ||||||||||| || | | ||||||||| |     |||||||||||| |||||||| |  |||||||||||||||||||||  ||||||    
T  52859956 accaatgcaacatttattattttttcccattattataccct-----attgaatttcattcaacttaactactccactaactacaattaataaggatgttt 52859862  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||  |||||||||||| ||  ||||||| |||||||||||||||  ||||||||||||| || | |||| ||||||    
T  52859861 tagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttccttaataatcgtgcataagccttaagcgacta 52859780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 152 - 331
Target Start/End: Complemental strand, 5841588 - 5841408
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaactt-aattgttccactaactacaattaataaatatgtttt 250  Q
    |||||||  ||||||||||  |||| | ||||||||||||||||||||||||||||||||||| || |  |||||||||||||||||||||   | ||||    
T  5841588 caatgcatcatttattattaatttccattattatacctttatttattgaatttcatccaacttaaactactccactaactacaattaataagggtatttt 5841489  T
Q  251 agtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||||  || ||||||||| ||| |||||||  |||| |||||||||  ||||| | ||||| |||| |||||||||||    
T  5841488 agtaaatgatattaattttaccattaaaatcaacgcaatcaatcatttccttaatagttgtgcacaaaccttaaacgacta 5841408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 298
Target Start/End: Original strand, 2653381 - 2653527
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||||||| ||||||||| | |||| | ||||||||||||||||||| |||||||||||| |||| |  |||  ||||||||||||||||   | |||||    
T  2653381 caatgcaacatttattatctttttccattattatacctttatttattaaatttcatccaatttaactactcctttaactacaattaataagagtatttta 2653480  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcattt 298  Q
     |||||  |||||||||||| ||||||||||| ||||||||||||||    
T  2653481 ataaatgatactaattttacaattgaaatcaacacaattaatcattt 2653527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 331
Target Start/End: Complemental strand, 49176097 - 49175915
Alignment:
Q  150 accaatgcaatatttattatttgtttca-actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtt 248  Q
    |||||||||| | ||||||||| ||||  ||||||||||| ||||||||||||||| ||||||||||| |  ||| |||||||||||||||||   | ||    
T  49176097 accaatgcaacaattattatttttttcccactattatacccttatttattgaattttatccaacttaactactccgctaactacaattaataaggttatt 49175998  T
Q  249 ttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||||||  |||||||||||  |||||||||   ||||||||||||||   ||| |||| |||| |||| |||||||||||    
T  49175997 ttagtaaatgatactaattttatcattgaaatctccacaattaatcattttcttaaaaatcatgcacaaaccttaaacgacta 49175915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 181 - 331
Target Start/End: Complemental strand, 52247559 - 52247409
Alignment:
Q  181 attatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaat 280  Q
    |||||||  ||||||| |||||||||| |||||||| |  |||||||||||||||||||||  || |||||||||||  || ||||||||| ||||||||    
T  52247559 attatacacttatttaatgaatttcattcaacttaactactccactaactacaattaataaggatattttagtaaattgtattaattttaccattgaaat 52247460  T
Q  281 caatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
     || ||||||||||||||   ||||||||||||| || | |||||||||||    
T  52247459 taacacaattaatcattttcttaataatcgtgcacaatccttaaacgacta 52247409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 180 - 308
Target Start/End: Complemental strand, 21240836 - 21240708
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||| ||||||||||||||||||||||||||| |  || ||||||||||||||||||  |||| |||||||||  |||||||||||| ||  |||    
T  21240836 tattatacccttatttattgaatttcatccaacttaactactcaactaactacaattaataaggatgtgttagtaaatgatactaattttaccatcaaaa 21240737  T
Q  280 tcaatacaattaatcatttctataataat 308  Q
    |||| ||| |||||||||||  |||||||    
T  21240736 tcaacacagttaatcatttccttaataat 21240708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 189 - 328
Target Start/End: Complemental strand, 11288752 - 11288614
Alignment:
Q  189 tttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaa 288  Q
    |||||||||||||||| ||||||||||| |  ||||| |||||||||||||||  || |||||||||||  || ||||||| | ||||||||||||||||    
T  11288752 tttatttattgaattttatccaacttaactactccaccaactacaattaataag-atattttagtaaatgatattaattttgccattgaaatcaatacaa 11288654  T
Q  289 ttaatcatttctataataatcgtgcaaaaactttaaacga 328  Q
    ||||||||||   |||||||||| || |||| ||||||||    
T  11288653 ttaatcattttcttaataatcgtacataaaccttaaacga 11288614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 166 - 292
Target Start/End: Complemental strand, 26147762 - 26147635
Alignment:
Q  166 ttatttgtttcaactattatacctttatttattgaat-ttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactacta 264  Q
    |||||| |||| | ||||||||| ||||||||||||  ||||||||||||||||  |||||||||||||||||||||  ||||||||||||||  |||||    
T  26147762 ttatttttttccattattatacccttatttattgaaaattcatccaacttaattactccactaactacaattaataagaatgttttagtaaatgatacta 26147663  T
Q  265 attttactattgaaatcaatacaattaa 292  Q
    ||||||| ||  ||||||| ||||||||    
T  26147662 attttaccatcaaaatcaacacaattaa 26147635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 178 - 332
Target Start/End: Original strand, 53346746 - 53346900
Alignment:
Q  178 actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattga 277  Q
    ||||||||||   |||||||||||||||||| ||||||| |  ||||||||||| |||||||||   ||||||||||||| ||| ||||||||| |||||    
T  53346746 actattatactcatatttattgaatttcatcaaacttaactactccactaactaaaattaataagggtgttttagtaaatgctattaattttaccattga 53346845  T
Q  278 aatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    ||  || ||||| ||| ||||   ||||||||||||| ||| |||||||||||||    
T  53346846 aactaacacaatcaattattttcttaataatcgtgcacaaattttaaacgactaa 53346900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 180 - 298
Target Start/End: Original strand, 461947 - 462065
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||| |||||| |||||||| || |||||||| |  ||| |||| ||||||||||||  || |||||||||||| || || |||||| |||||||    
T  461947 tattatacccttatttgttgaattttattcaacttaactactccgctaattacaattaataaggatattttagtaaataatattacttttaccattgaaa 462046  T
Q  280 tcaatacaattaatcattt 298  Q
    |||||||||||||||||||    
T  462047 tcaatacaattaatcattt 462065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 245 - 331
Target Start/End: Original strand, 51625137 - 51625223
Alignment:
Q  245 tgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||||||||||  |||||||||||| ||||||||||| ||||||||||||||   ||||||||||||| ||||||||||||||||    
T  51625137 tgttttagtaaatgttactaattttaccattgaaatcaacacaattaatcattttcttaataatcgtgcacaaactttaaacgacta 51625223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 161 - 326
Target Start/End: Original strand, 35998782 - 35998946
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatact 260  Q
    ||||||||||  |||  ||||||||| |||||||||||||||| |||||||||||| |  ||||  |||||||||||||||  || ||||| |||||  |    
T  35998782 atttattattctttttcactattatatctttatttattgaatt-catccaacttaactactccatcaactacaattaataatgatattttaataaatgtt 35998880  T
Q  261 actaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaac 326  Q
    |||||||||||| || ||||||| | || |||| |||| | |||||||||| ||||||| ||||||    
T  35998881 actaattttactgttaaaatcaacataaataataatttttttaataatcgtacaaaaacattaaac 35998946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 122 - 251
Target Start/End: Original strand, 51624722 - 51624846
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgtt 221  Q
    |||| ||||||||||||||||||     | ||||| || ||||||||||| |||| ||||| ||||| ||||||||||||||||||||||||||| |  |    
T  51624722 caaaataattgtcactttacaat-----atcaatgtaacatttattatttttttccactatcatacccttatttattgaatttcatccaacttaactact 51624816  T
Q  222 ccactaactacaattaataaatatgtttta 251  Q
    ||||||||||||| |||||||  |||||||    
T  51624817 ccactaactacaaataataaaagtgtttta 51624846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 177 - 292
Target Start/End: Complemental strand, 18741609 - 18741494
Alignment:
Q  177 aactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattg 276  Q
    ||||||||||   ||||||||||||||||||||||||||| |  |||| ||||||||||||||||| || ||||| |||||   |||||||||||  |||    
T  18741609 aactattataaacttatttattgaatttcatccaacttaactactccattaactacaattaataaagatattttaataaatgacactaattttaccgttg 18741510  T
Q  277 aaatcaatacaattaa 292  Q
    ||||||||| ||||||    
T  18741509 aaatcaatataattaa 18741494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 152 - 307
Target Start/End: Original strand, 25233143 - 25233297
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||||||| ||||||||||| |||||  ||| ||| |||||||||||||| |||||||||||||| |  | ||||||||| ||||||||    |||||||    
T  25233143 caatgcaacatttattatttttttcat-tataatatctttatttattgaacttcatccaacttaactacttcactaactataattaatactagtgtttta 25233241  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatttctataataa 307  Q
    ||||||  |||||||||||| ||  |||| || ||||||||| |||||| ||||||    
T  25233242 gtaaatgatactaattttaccatcaaaattaacacaattaattatttctttaataa 25233297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 150 - 327
Target Start/End: Complemental strand, 28501047 - 28500876
Alignment:
Q  150 accaatgcaatatttattatttgttt--caactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgt 247  Q
    |||||| ||| ||||||||||| |||  | | ||||||||| ||||||||||||||||||| |||||||        |||||| ||||||||||   | |    
T  28501047 accaatacaacatttattattttttttcccattattatacccttatttattgaatttcatcaaacttaa--------ctaactgcaattaataagggtat 28500956  T
Q  248 tttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacg 327  Q
    ||||||||||  || ||||||||| ||||||||||| ||||| |||||||||  ||||||||||||| |||| |||||||    
T  28500955 tttagtaaatgatattaattttaccattgaaatcaacacaatcaatcatttccttaataatcgtgcacaaacattaaacg 28500876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 180 - 331
Target Start/End: Complemental strand, 30682328 - 30682177
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    |||||| | ||||||||||||||||||| ||| |||| |  || ||||||||||| ||||||  || || ||||||||  || ||||||||| | | |||    
T  30682328 tattatgcttttatttattgaatttcattcaaattaactactctactaactacaactaataaggatattatagtaaatgatattaattttaccaataaaa 30682229  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    | || |||||||||||||| | ||||| |||||||||||| |||||||||||    
T  30682228 ttaacacaattaatcatttttttaatagtcgtgcaaaaaccttaaacgacta 30682177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 38663586 - 38663428
Alignment:
Q  173 tttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttact 272  Q
    |||| |||||| ||||  |||||||| ||||||||||||||||| |  |  ||||||||| |||||||||  ||||||||||||| |||||||||||||     
T  38663586 tttccactattgtacccatatttattaaatttcatccaacttaactactttactaactacgattaataaaagtgttttagtaaatgctactaattttacc 38663487  T
Q  273 attgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    ||||||| |||   |||||| | ||| | |||||||||| | ||||| ||||||||||||    
T  38663486 attgaaaacaacggaattaaccgtttttgtaataatcgttc-aaaaccttaaacgactaa 38663428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 190 - 328
Target Start/End: Complemental strand, 49579300 - 49579162
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactatt-gaaatcaatacaa 288  Q
    |||||||||||||||||||||||||||   || || |||||||||||||||||  ||||||||| |||| || ||||||||  |||  ||||||| ||||    
T  49579300 ttatttattgaatttcatccaacttaacaatttcaataactacaattaataaaagtgttttagt-aataataataattttatcattaaaaatcaacacaa 49579202  T
Q  289 ttaatcatttctataataatcgtgcaaaaactttaaacga 328  Q
    |||||||||| | ||| |||| |||| |||||||||||||    
T  49579201 ttaatcatttatttaaaaatcatgcacaaactttaaacga 49579162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 226 - 327
Target Start/End: Complemental strand, 46396969 - 46396868
Alignment:
Q  226 taactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaa 325  Q
    ||||||||||||||||   ||||||||||||| ||| ||||||||| ||||||||||| ||||||||||||||   |||| |||||||| |||| |||||    
T  46396969 taactacaattaataagagtgttttagtaaatgctattaattttaccattgaaatcaacacaattaatcatttacttaatgatcgtgcacaaaccttaaa 46396870  T
Q  326 cg 327  Q
    ||    
T  46396869 cg 46396868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 180 - 328
Target Start/End: Original strand, 19265797 - 19265945
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||| ||| ||| |||||||||||||| |||||||| |  ||||||||||| |||||||||   | ||||| ||||||  | |||||||| ||||||||    
T  19265797 tattacacccttaattattgaatttcattcaacttaactactccactaactataattaataaggttattttaataaataacattaattttattattgaaa 19265896  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacga 328  Q
    | |||| ||||||||||||   |||||| |||||| ||| |||||||||    
T  19265897 taaatataattaatcattttcttaataaccgtgcagaaagtttaaacga 19265945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 241
Target Start/End: Original strand, 10754333 - 10754423
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataa 241  Q
    |||||||||| | ||||||||| || |||| |||||||  ||||||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  10754333 accaatgcaacaattattattt-ttccaaccattatactcttatttattaaatttcattcaacttaattattccactaactacaattaataa 10754423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 241
Target Start/End: Original strand, 10968102 - 10968192
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataa 241  Q
    |||||||||| | ||||||||| || |||| |||||||  ||||||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  10968102 accaatgcaacaattattattt-ttccaaccattatactcttatttattaaatttcattcaacttaattattccactaactacaattaataa 10968192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 226 - 332
Target Start/End: Original strand, 4972595 - 4972701
Alignment:
Q  226 taactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaa 325  Q
    ||||||||||||||||   |||||||||||||   || |||||| | ||||||||||| |||||||||||||||  ||||||||||||| |||  |||||    
T  4972595 taactacaattaataagagtgttttagtaaatgtcaccaatttttcaattgaaatcaacacaattaatcatttcattaataatcgtgcacaaatcttaaa 4972694  T
Q  326 cgactaa 332  Q
    |||||||    
T  4972695 cgactaa 4972701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 180 - 290
Target Start/End: Complemental strand, 50264212 - 50264102
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||| |||||||||||||||||| |||||||| | || |||||||||||||||||||   | |||||||||||  |  ||||||||  |||||||    
T  50264212 tattatacccttatttattgaatttcattcaacttaaatatttcactaactacaattaataagagtattttagtaaatgatgttaattttaacattgaaa 50264113  T
Q  280 tcaatacaatt 290  Q
    |||| ||||||    
T  50264112 tcaacacaatt 50264102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 298
Target Start/End: Complemental strand, 47359088 - 47358963
Alignment:
Q  173 tttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttact 272  Q
    |||| ||||||  ||| |||||||||||||||||| ||||||||||  |||||| |||||||||||||||  | |||||| ||||  | |||||||||      
T  47359088 tttccactattgcacccttatttattgaatttcattcaacttaattactccactgactacaattaataaaagtattttagaaaattattctaattttatc 47358989  T
Q  273 attgaaatcaatacaattaatcattt 298  Q
    ||||||||||| ||||| ||| ||||    
T  47358988 attgaaatcaacacaatcaataattt 47358963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 298
Target Start/End: Original strand, 54506787 - 54506895
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaat 289  Q
    ||||| ||||||||||||| ||||||| |  |||||||||||||||| ||||  || ||||| |||||  || ||||||||| ||||||||||| ||| |    
T  54506787 ttattaattgaatttcatcaaacttaactactccactaactacaattgataatgatattttaataaatgatattaattttaccattgaaatcaacacagt 54506886  T
Q  290 taatcattt 298  Q
    |||||||||    
T  54506887 taatcattt 54506895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 152 - 331
Target Start/End: Original strand, 18532140 - 18532319
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    ||||| |||||||||||||  |||  ||||||||| | | |||||||||||||||||| | ||||    |||||| |||| ||||||||||  | |||||    
T  18532140 caatgtaatatttattattatttttcactattatatcataatttattgaatttcatcctagttaaccactccacttactataattaataaaactatttta 18532239  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
     |||||  |||||||||||| ||| ||||  ||| |||||||||||| | ||| |||| |||| |||| |||||| ||||    
T  18532240 ataaatcatactaattttaccattaaaatttatataattaatcatttatgtaaaaatcatgcacaaaccttaaacaacta 18532319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 332
Target Start/End: Original strand, 52869107 - 52869213
Alignment:
Q  226 taactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaa 325  Q
    |||||||||||||||||  | ||||| ||||   || |||| |||||||||||||||| ||||||||| |||||  ||||||| ||||| |||| |||||    
T  52869107 taactacaattaataaaggtattttaataaacgatattaatcttactattgaaatcaacacaattaattatttccttaataattgtgcacaaaccttaaa 52869206  T
Q  326 cgactaa 332  Q
    |||||||    
T  52869207 cgactaa 52869213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 257
Target Start/End: Original strand, 44526377 - 44526445
Alignment:
Q  189 tttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaat 257  Q
    |||||||||| ||||||||||||||| | | ||||||||||||||||||||||  |||||||| |||||    
T  44526377 tttatttattaaatttcatccaacttcactattccactaactacaattaataaggatgttttaataaat 44526445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 298
Target Start/End: Complemental strand, 32470091 - 32469962
Alignment:
Q  168 atttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaatt 267  Q
    |||| |||| ||||| ||| ||||||||||||||||| ||| |||||||    |  | |||||||| |||||||  |||||||| |||||  ||||||||    
T  32470091 atttttttccactatgatatctttatttattgaattt-atcaaacttaaaaactttattaactacagttaataagaatgttttaataaatgatactaatt 32469993  T
Q  268 ttactattgaaatcaatacaattaatcattt 298  Q
    |||| ||| ||||||| ||||||||||||||    
T  32469992 ttaccattaaaatcaacacaattaatcattt 32469962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 329
Target Start/End: Original strand, 5618536 - 5618680
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||| |||| ||||||||||||||| |||||| |     ||||| || |||||||||||  || ||||| |||||| |  ||||||||| ||| |||    
T  5618536 tattataactttttttattgaatttcattcaacttta-----ccactcacaacaattaataaggatattttaataaataattttaattttaccattaaaa 5618630  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgac 329  Q
    |||| |||| | ||||||| | ||||||||| ||| |||| |||||||||    
T  5618631 tcaacacaactcatcatttttttaataatcgagcacaaacattaaacgac 5618680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 241
Target Start/End: Original strand, 10672614 - 10672703
Alignment:
Q  153 aatgcaatatttattatttgttt-caactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataa 241  Q
    ||||||| ||||||||||| ||| |||| |||||||  ||||||||||||||||||||||||||| | || || | |||| |||||||||    
T  10672614 aatgcaagatttattattttttttcaaccattatactcttatttattgaatttcatccaacttaactatttcattgactaaaattaataa 10672703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 241
Target Start/End: Original strand, 10886254 - 10886343
Alignment:
Q  153 aatgcaatatttattatttgttt-caactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataa 241  Q
    ||||||| ||||||||||| ||| |||| |||||||  ||||||||||||||||||||||||||| | || || | |||| |||||||||    
T  10886254 aatgcaagatttattattttttttcaaccattatactcttatttattgaatttcatccaacttaactatttcattgactaaaattaataa 10886343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 331
Target Start/End: Complemental strand, 38502604 - 38502463
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaat 289  Q
    ||||||||||||||| ||||||||||| |  | || |||||| ||||||||||  | ||||| |||||  |||||||||||| ||  ||||||| |||||    
T  38502604 ttatttattgaattttatccaacttaactactacattaactataattaataaaagtattttaataaatgatactaattttaccatcaaaatcaacacaat 38502505  T
Q  290 taatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||| |||||  ||||||   ||||  ||| |||||||||||    
T  38502504 taattatttccttaataactatgcatcaaccttaaacgacta 38502463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 312
Target Start/End: Complemental strand, 42517773 - 42517638
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattg---ttccactaactacaattaataaatatgttttagtaaatactactaattttactattg 276  Q
    ||||||||  ||||||||||||||||||| ||||| | |    || ||||||||| |||||||||   | |||||||||||  |  ||||||||| ||||    
T  42517773 tattatactgttatttattgaatttcatctaactttactagtatttcactaactataattaataagggtattttagtaaatgatcttaattttaccattg 42517674  T
Q  277 aaatcaatacaattaatcatttctataataatcgtg 312  Q
    ||||||| ||||||||||||||   |||||||||||    
T  42517673 aaatcaacacaattaatcattttcttaataatcgtg 42517638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 1038873 - 1038961
Alignment:
Q  183 tatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttac 271  Q
    |||||||||||||||| |||||||  |  |||||||| ||||| |||||| ||||||||| || ||||| || ||| ||||||||||||    
T  1038873 tatacctttatttattcaatttcactctgcttaattgctccacgaactactattaataaaaatattttaatacataatactaattttac 1038961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 28911316 - 28911252
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaa 216  Q
    |||||||| ||||||||||| |||| | ||||||||  ||||||||||||||||||| |||||||    
T  28911316 caatgcaacatttattatttttttccattattatactcttatttattgaatttcatcaaacttaa 28911252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 178 - 258
Target Start/End: Original strand, 43902238 - 43902318
Alignment:
Q  178 actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaata 258  Q
    |||||||| || |||||||||||||||||| ||||||||||  |||||||||||  ||||||||  || ||||| ||||||    
T  43902238 actattatgcccttatttattgaatttcatgcaacttaattactccactaactatgattaataagaatattttaataaata 43902318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 31370432 - 31370373
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaat 239  Q
    |||||||| |||||||||||| ||||||||||||||| |  ||||||||||| |||||||    
T  31370432 tattatacatttatttattgattttcatccaacttaactactccactaactataattaat 31370373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 48914278 - 48914156
Alignment:
Q  182 ttatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaat-----actactaattttactattg 276  Q
    ||||||| | ||||||||||||||||  |||||||||  | |||||||||||| ||||||  || |||||||| ||     | |||||||||||| ||||    
T  48914278 ttataccctaatttattgaatttcattaaacttaattacttcactaactacaaataataaggatattttagtatatgatggagtactaattttaccattg 48914179  T
Q  277 aaatcaatacaattaatcatttc 299  Q
    |||| || ||||||||| |||||    
T  48914178 aaatgaacacaattaattatttc 48914156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 298
Target Start/End: Original strand, 3098757 - 3098825
Alignment:
Q  230 tacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcattt 298  Q
    ||||||||||||| || |||||||||||  ||  |||||||  ||||||||||||| ||||||||||||    
T  3098757 tacaattaataaagatattttagtaaatgatatcaattttatcattgaaatcaatataattaatcattt 3098825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 331
Target Start/End: Complemental strand, 41711608 - 41711437
Alignment:
Q  161 atttattatttgttt-caactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatac 259  Q
    ||||||||||| ||| | |||||| || | ||||||||||||||||||  |||||||    ||| |||| || |||||| ||  || |||||  ||||      
T  41711608 atttattattttttttccactattgtatccttatttattgaatttcataaaacttaacaactccgctaaataaaattaaaaatgatattttaaaaaatga 41711509  T
Q  260 tactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    || ||||||||| ||| ||||||| | ||||||||||||| |||| ||| ||||| |||| |||||| ||||    
T  41711508 tattaattttaccattaaaatcaacataattaatcatttccataaaaattgtgcacaaaccttaaacaacta 41711437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 4972532 - 4972589
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatc 208  Q
    ||||||| || ||||||||||| ||||| |||||||||  |||||||||||||||||||    
T  4972532 accaatgtaacatttattatttttttca-ctattatacacttatttattgaatttcatc 4972589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 299
Target Start/End: Original strand, 26885504 - 26885542
Alignment:
Q  261 actaattttactattgaaatcaatacaattaatcatttc 299  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  26885504 actaattttatcattgaaatcaatacaattaatcatttc 26885542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 298
Target Start/End: Original strand, 30192238 - 30192312
Alignment:
Q  224 actaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcattt 298  Q
    ||||||||||||||||||  || |||||| ||||   | ||||||||  ||||||||||| ||||||||||||||    
T  30192238 actaactacaattaataagaatattttagcaaatgacattaattttataattgaaatcaacacaattaatcattt 30192312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 108
Target Start/End: Complemental strand, 47464593 - 47464563
Alignment:
Q  78 cgtctcacaattattgtctctttaacatttt 108  Q
    |||||||||||||||||||||||||||||||    
T  47464593 cgtctcacaattattgtctctttaacatttt 47464563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 27880363 - 27880330
Alignment:
Q  180 tattatacctttatttattgaatttcatccaact 213  Q
    ||||||||||||||||||| ||||||||||||||    
T  27880363 tattatacctttatttattaaatttcatccaact 27880330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 242
Target Start/End: Original strand, 54202167 - 54202247
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaa 242  Q
    ||||||||||| |||| ||| |||||   |||||||||||||||||||| ||| ||||  | |||||| |||||||||||||    
T  54202167 atttattattt-tttctactgttatattcttatttattgaatttcatcccactcaattacttcactaattacaattaataaa 54202247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 283
Target Start/End: Original strand, 7986962 - 7987066
Alignment:
Q  179 ctattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaa 278  Q
    ||||||||| |||||||||| ||||||||  ||||||| |  || |||||| | |||||||||  || |||||||| ||  |||||||||||  ||| ||    
T  7986962 ctattatacttttatttatttaatttcattaaacttaactactctactaacaataattaataataatattttagtagatgatactaattttatcattaaa 7987061  T
Q  279 atcaa 283  Q
    |||||    
T  7987062 atcaa 7987066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 257
Target Start/End: Complemental strand, 16506324 - 16506288
Alignment:
Q  221 tccactaactacaattaataaatatgttttagtaaat 257  Q
    |||| |||||||||||||||||| |||||||||||||    
T  16506324 tccattaactacaattaataaatgtgttttagtaaat 16506288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 304
Target Start/End: Complemental strand, 17512499 - 17512347
Alignment:
Q  153 aatgcaatatttattatttgtttcaactattatacctttat-ttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||| |||||||||||||| |||| |||| ||| |  |||| ||||||||||  |  | |||||||| ||| || |||||||||||||||   | |||||    
T  17512499 aatgtaatatttattatttttttccactaatatgcacttatattattgaattcaactctacttaattattcgacaaactacaattaataatggtatttta 17512400  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatttctataa 304  Q
    ||||||  || |||||||||  || |||||||  ||| ||||||||| |||||    
T  17512399 gtaaattatattaattttacctttaaaatcaactcaactaatcatttttataa 17512347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 19627169 - 19627114
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatc 208  Q
    |||| ||| ||| ||||||| ||||| |||||||| |||||||||||||||||||||    
T  19627169 caatacaacattaattatttttttca-ctattatatctttatttattgaatttcatc 19627114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 300
Target Start/End: Original strand, 31257518 - 31257558
Alignment:
Q  260 tactaattttactattgaaatcaatacaattaatcatttct 300  Q
    |||||||||||| ||| ||||||||| ||||||||||||||    
T  31257518 tactaattttacaattaaaatcaataaaattaatcatttct 31257558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 35251888 - 35251936
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaa 228  Q
    ||||||| | ||||||||||||||||||| |||||||||  ||||||||    
T  35251888 tattatatccttatttattgaatttcatctaacttaattactccactaa 35251936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 5e-50; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 152 - 332
Target Start/End: Original strand, 181517 - 181696
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||||||| ||||||||||  |||  ||||||||||| ||||||||||||||||||||||||||| |  ||||||||||| |||||||||  ||||||||    
T  181517 caatgcaacatttattattatttttcactattatacccttatttattgaatttcatccaacttaactactccactaactataattaataatgatgtttta 181616  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||  |||| ||| ||||||||    
T  181617 gtaaatactactaattttactattgaaatcaatacaattaat-atttttttaataatcgtgctcaaaccttagacgactaa 181696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 178 - 332
Target Start/End: Complemental strand, 3720368 - 3720214
Alignment:
Q  178 actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattga 277  Q
    ||||||||||  ||||||| |||||||||| |||||||| | ||||||||||||||||||||||   |||||| ||||||||||| |||||||  |||||    
T  3720368 actattatactcttatttactgaatttcattcaacttaactattccactaactacaattaataagagtgtttttgtaaatactacaaattttataattga 3720269  T
Q  278 aatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    |||||| |||||||||||||||  ||||||||||||| |||| ||||||||||||    
T  3720268 aatcaacacaattaatcatttcattaataatcgtgcacaaaccttaaacgactaa 3720214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 160 - 331
Target Start/End: Complemental strand, 3291913 - 3291742
Alignment:
Q  160 tatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatac 259  Q
    |||||||||||| | || | | ||||||  ||||||||||||||| ||||||||||| |  | ||||||||||||||||||||  | ||||||||||||     
T  3291913 tatttattatttttgtccattgttatacacttatttattgaattttatccaacttaactacttcactaactacaattaataaaggtattttagtaaataa 3291814  T
Q  260 tactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||| |||| ||| ||||| |||||||||||||||||  |||||||||||||||||| |||||||||||    
T  3291813 tactaatattaccattaaaatcgatacaattaatcatttccttaataatcgtgcaaaaaccttaaacgacta 3291742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 152 - 298
Target Start/End: Complemental strand, 31894361 - 31894217
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||||||| ||||||||||| ||||| |||||||||| ||||||||| ||||||||||||||||| |  | |||||||||||||||||||  | ||||||    
T  31894361 caatgcaacatttattattt-tttca-ctattatacccttatttattaaatttcatccaacttaactacttcactaactacaattaataatgacgtttta 31894264  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcattt 298  Q
    |||||| ||||||||||||| ||||||||||| ||||||||||||||    
T  31894263 gtaaatgctactaattttaccattgaaatcaacacaattaatcattt 31894217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 154 - 332
Target Start/End: Original strand, 15058081 - 15058258
Alignment:
Q  154 atgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagt 253  Q
    |||||| ||||||||||| |||  ||||||||||| ||||||||||||||||||||||||||| |  | |||||||||||||||||||   | |||||||    
T  15058081 atgcaacatttattattt-tttgtactattatacccttatttattgaatttcatccaacttaaatacttcactaactacaattaataagggtattttagt 15058179  T
Q  254 aaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    |||| | ||||||||||| |||||||| ||   ||||||||||||   ||||||||||||| |||| ||||||||||||    
T  15058180 aaatgccactaattttaccattgaaattaacttaattaatcattttcttaataatcgtgcacaaaccttaaacgactaa 15058258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 152 - 325
Target Start/End: Original strand, 13909384 - 13909558
Alignment:
Q  152 caatgcaatatttattatttgtttca-actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttt 250  Q
    |||| ||| ||||||||||| ||||  | ||||||||  ||||||||| ||||||||| |||||||||  |||||||||||||||||||||   | ||||    
T  13909384 caatacaacatttattatttttttctcattattatactcttatttattcaatttcatctaacttaattactccactaactacaattaataagggtatttt 13909483  T
Q  251 agtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaa 325  Q
    |||||||   ||||||||||| ||||||||||| ||| |||||||||||  ||||||||||||| ||||||||||    
T  13909484 agtaaatgtcactaattttaccattgaaatcaacacatttaatcatttccttaataatcgtgcacaaactttaaa 13909558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 163 - 331
Target Start/End: Original strand, 29363279 - 29363446
Alignment:
Q  163 ttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactac 262  Q
    ||||||||| |||| | ||||||||  ||||||||||||||||||||||||||| |  ||| |||||||||||||||||  ||||||||||||||  |||    
T  29363279 ttattattt-tttccattattatactcttatttattgaatttcatccaacttaactaatccgctaactacaattaataaggatgttttagtaaatgatac 29363377  T
Q  263 taattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    || |||||| ||  ||||||| ||||||||||||||   ||||||| ||||| |||| |||||||||||    
T  29363378 tagttttaccatcaaaatcaacacaattaatcattttcttaataattgtgcataaaccttaaacgacta 29363446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 152 - 330
Target Start/End: Complemental strand, 11656100 - 11655921
Alignment:
Q  152 caatgcaatatttattatttgtttca-actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttt 250  Q
    |||||||  ||||||||||| ||||  | ||||||||| ||||||||||||||||||||||||| | |  |||||||||||||||||||||   ||||||    
T  11656100 caatgcagcatttattatttttttcccattattatacccttatttattgaatttcatccaactttactactccactaactacaattaataagggtgtttt 11656001  T
Q  251 agtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgact 330  Q
    |||||||   ||||||||||| ||  ||||||| ||||||||||||||   |||||| |||||| |||| ||||||||||    
T  11656000 agtaaatgacactaattttaccatcaaaatcaacacaattaatcattttcttaataaccgtgcataaaccttaaacgact 11655921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 152 - 331
Target Start/End: Complemental strand, 32440798 - 32440619
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||||||  ||||||||||  |||| | |||| ||||||||||||||  |||||||||||||||| |  || ||||| ||||||||||||   |||||||    
T  32440798 caatgcagcatttattattattttccattattgtacctttatttattacatttcatccaacttaactactctactaattacaattaataagggtgtttta 32440699  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||| |||||||||||| ||  ||||||| |||||||||||||||   ||||| |||||| |||  |||||||||||    
T  32440698 gtaaataatactaattttaccatcaaaatcaacacaattaatcatttcctaaataaccgtgcataaatcttaaacgacta 32440619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 178 - 328
Target Start/End: Original strand, 1781791 - 1781939
Alignment:
Q  178 actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattga 277  Q
    |||||||||||||| ||||||||||||||| ||||||||    |||||||||||||||||||||   ||||||||||||| ||||||||||||| |||||    
T  1781791 actattataccttt-tttattgaatttcattcaacttaa-cactccactaactacaattaataagggtgttttagtaaatgctactaattttaccattga 1781888  T
Q  278 aatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacga 328  Q
     ||||| | ||||||||||||   ||| ||||||||| |||| ||||||||    
T  1781889 gatcaacataattaatcattttcttaacaatcgtgcataaaccttaaacga 1781939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 13087529 - 13087650
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaat 289  Q
    |||||||||||||||||||||||||||||  | ||||||||| |||||||||  ||||||||||||||  || ||||||||| ||||||||||| |||||    
T  13087529 ttatttattgaatttcatccaacttaattacttcactaactataattaataaggatgttttagtaaatgatattaattttaccattgaaatcaacacaat 13087628  T
Q  290 taatca-tttctataataatcgt 311  Q
    |||||| ||||| ||||||||||    
T  13087629 taatcactttct-taataatcgt 13087650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 194 - 323
Target Start/End: Complemental strand, 21804639 - 21804511
Alignment:
Q  194 ttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaat 293  Q
    ||||| |||||| |||||||||||| ||||||||||||||||||||||  || ||| |||||||  |||||||||||| |||||||| ||||||||||||    
T  21804639 ttattaaatttcttccaacttaatttttccactaactacaattaataag-atatttaagtaaatgatactaattttacaattgaaattaatacaattaat 21804541  T
Q  294 catttctataataatcgtgcaaaaacttta 323  Q
    ||||||| ||| |||  |||| ||||||||    
T  21804540 catttctttaaaaattatgcacaaacttta 21804511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 180 - 314
Target Start/End: Original strand, 1225037 - 1225170
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||| ||||||||| ||||| ||||||||||| |  | ||||||||| |||||||||  || |||||||||||| || ||||||||||||| |||    
T  1225037 tattatacccttatttattcaattt-atccaacttaacttcttcactaactaaaattaataagaatattttagtaaataatattaattttactatttaaa 1225135  T
Q  280 tcaatacaattaatcatttctataataatcgtgca 314  Q
    |||| |||||||||||||||| ||| | |||||||    
T  1225136 tcaacacaattaatcatttctttaaaactcgtgca 1225170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 327
Target Start/End: Original strand, 7920226 - 7920374
Alignment:
Q  178 actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattga 277  Q
    ||||||||||| |||||||||||||||||| ||| |||| |  | ||||||||||||||||| || || |||||||||||  |  ||||||||| |||||    
T  7920226 actattataccattatttattgaatttcattcaaattaaatacttcactaactacaattaat-aagatattttagtaaatggttttaattttaccattga 7920324  T
Q  278 aatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacg 327  Q
    |||||| | |||||||||||||| ||| ||||||||| |||  |||||||    
T  7920325 aatcaacaaaattaatcatttctttaaaaatcgtgcacaaatcttaaacg 7920374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 299
Target Start/End: Complemental strand, 24983576 - 24983455
Alignment:
Q  178 actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattga 277  Q
    |||| |||||| ||||||||||||||||| ||||||||| |  |||||||||||||||||||||   |||||||||||||   ||||||||||| |||||    
T  24983576 actaatatacccttatttattgaatttcacccaacttaactactccactaactacaattaataagggtgttttagtaaatgacactaattttaccattga 24983477  T
Q  278 aatcaatacaattaatcatttc 299  Q
    ||||||  ||| ||||||||||    
T  24983476 aatcaactcaactaatcatttc 24983455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 325
Target Start/End: Original strand, 23142604 - 23142801
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgtt 221  Q
    |||| ||||||||||||||||||     | |||||||| ||||||  ||| || | | |||||||||||  |||||||||||||||| | ||||| |  |    
T  23142604 caaaataattgtcactttacaat-----atcaatgcaacatttatcgttttttcccattattataccttc-tttattgaatttcatctagcttaactact 23142697  T
Q  222 ccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactt 321  Q
    |||||| |||||||||||||   ||||||||||||| | |||| |||||| ||||||||||| ||||||||||||||   ||||||||||| | |||| |    
T  23142698 ccactacctacaattaataagggtgttttagtaaatgccactatttttaccattgaaatcaacacaattaatcattttcttaataatcgtggataaacct 23142797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 173 - 258
Target Start/End: Complemental strand, 34657694 - 34657609
Alignment:
Q  173 tttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaata 258  Q
    |||| |||||||||| |||||||||||||||||||||||||||| |  ||||||||||||||||||||||  ||||||| ||||||    
T  34657694 tttccactattatacatttatttattgaatttcatccaacttaactactccactaactacaattaataaaagtgttttaataaata 34657609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 163 - 325
Target Start/End: Complemental strand, 6834510 - 6834349
Alignment:
Q  163 ttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactac 262  Q
    ||||||||| |||| | |||||||  |||||||||||||| |||| ||| |||  | ||| |||||||| ||||||||||  |||||||||||||  ||     
T  6834510 ttattatttttttccattattatat-tttatttattgaatctcattcaatttatctattctactaactataattaataaaggtgttttagtaaatgatat 6834412  T
Q  263 taattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaa 325  Q
    |||||| |||||  ||||||| ||||||||| ||||   ||||||||||||| ||||||||||    
T  6834411 taatttgactatcaaaatcaacacaattaattattttcttaataatcgtgcataaactttaaa 6834349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 298
Target Start/End: Original strand, 5302321 - 5302458
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatact 260  Q
    ||||||||||| |||| | ||| |||||  ||||||||||| |||||||||||||| |  |||| ||||||||||||||||  ||||||| ||||||  |    
T  5302321 atttattatttttttccattataatacccgtatttattgaacttcatccaacttaactactccattaactacaattaataaggatgttttggtaaattat 5302420  T
Q  261 actaattttactattgaaatcaatacaattaatcattt 298  Q
    | ||||||||| ||  ||||||| ||| ||||||||||    
T  5302421 attaattttaccatcaaaatcaacacatttaatcattt 5302458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 299
Target Start/End: Original strand, 17828939 - 17829048
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaat 289  Q
    ||||| ||| |||||||||||||||||||  | |||||||||||||||||||| || |||||||||||  || |||||||||| ||||||| || || ||    
T  17828939 ttattaattaaatttcatccaacttaattacttcactaactacaattaataaagatattttagtaaatgatattaattttactgttgaaattaacactat 17829038  T
Q  290 taatcatttc 299  Q
    |||| |||||    
T  17829039 taataatttc 17829048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 298
Target Start/End: Original strand, 6801891 - 6802038
Alignment:
Q  152 caatgcaatatttattatttgttt-caactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttt 250  Q
    |||||||| ||||||||||| ||| | | ||| ||||| |||||||| ||| |||||||||||||| |  |||||||||||||||||||||    |||||    
T  6801891 caatgcaacatttattattttttttccattataatacccttatttatcgaacttcatccaacttaactactccactaactacaattaataagggcgtttt 6801990  T
Q  251 agtaaatactactaattttactattgaaatcaatacaattaatcattt 298  Q
    |||||||  || ||||||||| ||  ||||||| | ||||||||||||    
T  6801991 agtaaatgatattaattttaccatcaaaatcaacataattaatcattt 6802038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 181 - 331
Target Start/End: Complemental strand, 1063727 - 1063577
Alignment:
Q  181 attatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaat 280  Q
    |||||||| ||| ||||| ||||||||  ||||||| |  ||||||||||||||||| | |   | |||||||||||| |||||||||||  ||||||||    
T  1063727 attatacccttacttattaaatttcatttaacttaactactccactaactacaattactcagagtattttagtaaataatactaattttatcattgaaat 1063628  T
Q  281 caatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||| ||||||||||||||   ||| |||  | || ||||||||||||||||    
T  1063627 caacacaattaatcattttcttaaaaattatacataaactttaaacgacta 1063577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 150 - 331
Target Start/End: Original strand, 30716858 - 30717040
Alignment:
Q  150 accaatgcaatatttattatttgttt-caactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtt 248  Q
    |||| ||||| ||||||||||| ||| | | ||| ||||  ||||||||||||||| ||||||||| | |  |||||||||||||||||||||   ||||    
T  30716858 accagtgcaacatttattattttttttccattataatactcttatttattgaattttatccaactttactactccactaactacaattaataagggtgtt 30716957  T
Q  249 ttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    | |||||||  |||||||||||| ||  || |||||| |||||||||||||  ||||||  |||||  ||  |||||||||||    
T  30716958 taagtaaatgatactaattttaccatcaaagtcaataaaattaatcatttccttaataactgtgcatcaatcttaaacgacta 30717040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 1956132 - 1955990
Alignment:
Q  152 caatgcaatatttattatttgtttca-actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttt 250  Q
    |||||||| ||||||||||| ||||  | ||||||||||| ||||||||||||| ||| |||  |  |  | |||||||||||||||||||   | | ||    
T  1956132 caatgcaacatttattatttttttctcattattatacctt-atttattgaattttatcgaacacagctacttcactaactacaattaataagagtatatt 1956034  T
Q  251 agtaaatactactaattttactattgaaatcaatacaattaatc 294  Q
    |||||||  |||||||||||| ||||||||||||||||||||||    
T  1956033 agtaaatgatactaattttaccattgaaatcaatacaattaatc 1955990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 331
Target Start/End: Original strand, 21010162 - 21010317
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccac----taactacaattaataaatatgttttagtaaatactactaattttactatt 275  Q
    ||||||||  ||||||||||||||||||||||||||| |  |||||    ||||||||||| ||||   |||||||||||||  |||||||||| | ||     
T  21010162 tattatactgttatttattgaatttcatccaacttaactactccactaattaactacaatttataagggtgttttagtaaatgatactaatttttccatc 21010261  T
Q  276 gaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
     |||| || ||||||||||||||   ||||||| ||||| |||| |||||| ||||    
T  21010262 aaaattaacacaattaatcattttcttaataattgtgcataaaccttaaacaacta 21010317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 328
Target Start/End: Complemental strand, 27448231 - 27448133
Alignment:
Q  230 tacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacga 328  Q
    ||||||||||||  ||||||||||||||  ||||||||| |  ||  ||||||| |||||||||||||||  ||||||| |||||||||| ||||||||    
T  27448231 tacaattaataatgatgttttagtaaatgatactaatttcatcatcaaaatcaacacaattaatcatttccttaataattgtgcaaaaaccttaaacga 27448133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 152 - 297
Target Start/End: Original strand, 15582246 - 15582389
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||||||||| ||||||||| ||||| |||| ||| | ||||||||||||||||||  |||||||    | ||||||||||||  | ||||| | |||||    
T  15582246 caatgcaataattattattt-tttca-ctatcatatccttatttattgaatttcattaaacttaaccacttcactaactacaacaagtaaatgtatttta 15582343  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatt 297  Q
     |||||  |||| ||||||| ||||||||||| |||||||||||||    
T  15582344 ataaatgatactgattttaccattgaaatcaacacaattaatcatt 15582389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 152 - 288
Target Start/End: Original strand, 34299955 - 34300092
Alignment:
Q  152 caatgcaatatttattatttg-tttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttt 250  Q
    |||| ||| |||||||||||  |||| |||| |||| | |||||||||||||  |||||||||||| |  | ||||||| |||||||||||  || ||||    
T  34299955 caatacaacatttattattttctttccactaatatatccttatttattgaataccatccaacttaactacttcactaaccacaattaataaggatatttt 34300054  T
Q  251 agtaaatactactaattttactattgaaatcaatacaa 288  Q
    |||||||| |||||||||||  ||| ||||||| ||||    
T  34300055 agtaaataatactaattttatcattcaaatcaaaacaa 34300092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 270
Target Start/End: Complemental strand, 11143741 - 11143622
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||  ||||||||||| |||||  ||| ||||| |||||||||||| |||||||||||||| |  | ||||||||| |||||||||   || ||    
T  11143741 accaatgcagcatttattatttttttcat-tataatacccttatttattgaacttcatccaacttaactacttcactaactataattaataagggtgatt 11143643  T
Q  250 tagtaaatactactaatttta 270  Q
    ||||||||  |||||||||||    
T  11143642 tagtaaatgatactaatttta 11143622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 298
Target Start/End: Original strand, 17835345 - 17835491
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||| |||| |||||| || | | ||||||||| ||||| || |||| ||||||||||||| |  |  || ||||||||||||||||| | |||    
T  17835345 accaatgcaacatttgttattttttccta-tattataccattattaat-gaatatcatccaacttaactactaaacaaactacaattaataaatgtattt 17835442  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcattt 298  Q
    ||||||||   | |||||||| |||| ||||||||||||||||| ||||    
T  17835443 tagtaaatgagattaattttattattaaaatcaatacaattaattattt 17835491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 270
Target Start/End: Complemental strand, 10923507 - 10923413
Alignment:
Q  176 caactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaatttta 270  Q
    |||||||||||   ||||||||||||||||||| || |||||| |||||||| |||||||||| ||   | |||||||||||| || ||||||||    
T  10923507 caactattatattcttatttattgaatttcatctaatttaattattccactagctacaattaacaacggtattttagtaaataatattaatttta 10923413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 270
Target Start/End: Original strand, 33510129 - 33510218
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaatttta 270  Q
    ||||||||| ||||||| | ||||||||||||||||| |  || | ||| ||||||||||||| || |||||||||||| |||||||||||    
T  33510129 tattatacccttatttaataaatttcatccaacttaactactcaattaattacaattaataaaaatattttagtaaata-tactaatttta 33510218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 15046111 - 15046171
Alignment:
Q  178 actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaat 239  Q
    ||||||||||| ||||||||||||||||||||||| ||| |  |||||||||||||||||||    
T  15046111 actattatacccttatttattgaatttcatccaac-taactactccactaactacaattaat 15046171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 314
Target Start/End: Complemental strand, 27367496 - 27367427
Alignment:
Q  245 tgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgca 314  Q
    ||||||||||||| | | ||||||||| | | ||||||| |||||||||||||||| |||||||||||||    
T  27367496 tgttttagtaaatgcaattaattttacaactaaaatcaacacaattaatcatttctttaataatcgtgca 27367427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 314
Target Start/End: Complemental strand, 27457843 - 27457774
Alignment:
Q  245 tgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgca 314  Q
    ||||||||||||| | | ||||||||| | | ||||||| |||||||||||||||| |||||||||||||    
T  27457843 tgttttagtaaatgcaattaattttacaactaaaatcaacacaattaatcatttctttaataatcgtgca 27457774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 16205273 - 16205206
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaata 258  Q
    ||||||||||| ||||||| ||||||| | |||||||||||||||||||| || || ||||||||||||    
T  16205273 ttatttattgagtttcatctaacttaaatattccactaactacaattaat-aagatattttagtaaata 16205206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 157 - 311
Target Start/End: Original strand, 21018723 - 21018879
Alignment:
Q  157 caatatttattatttgttt-caactattatacctttatttattgaatttcatccaact-taattgttccactaactacaattaataaatatgttttagta 254  Q
    ||||||||||||||| ||| | |||| || |||||||||||||| ||||||  || || ||||| ||||| |||||| || ||||||   ||||||||||    
T  21018723 caatatttattattttttttctactaatacacctttatttattgtatttcaatcatctataattattccattaactataactaataatggtgttttagta 21018822  T
Q  255 aatactactaattttactattgaaatcaatacaattaatcatttctataataatcgt 311  Q
    |||| |||  ||||||  ||| |||||||||  | ||||||||||  ||||||||||    
T  21018823 aataatacatattttatcattaaaatcaatagtagtaatcatttccttaataatcgt 21018879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 8695077 - 8695124
Alignment:
Q  223 cactaactacaattaataaatatgttttagtaaatactactaatttta 270  Q
    |||||||||||||||||||  |||||||||||||| ||| ||||||||    
T  8695077 cactaactacaattaataagaatgttttagtaaatgctattaatttta 8695124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 21425712 - 21425646
Alignment:
Q  152 caatgcaatatttattatt--tgtttcaactattatacctttatttattgaatttcatccaacttaa 216  Q
    |||||||| ||||||||||  | |||| || |||||| | |||||||||||||||||||||||||||    
T  21425712 caatgcaacatttattattattttttccaccattatatccttatttattgaatttcatccaacttaa 21425646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 23397705 - 23397643
Alignment:
Q  221 tccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaa 283  Q
    ||||||||||||| |||||| || |||||||||||||   ||||||||||| ||| |||||||    
T  23397705 tccactaactacacttaatagatgtgttttagtaaattacactaattttaccatttaaatcaa 23397643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 206
Target Start/End: Complemental strand, 27367600 - 27367524
Alignment:
Q  127 taattgtcactttacaatgcaacaccaatgcaatatttatta--tttgtttcaactattatacctttatttattgaatttca 206  Q
    ||||||||||||||||||     ||||||| || ||||||||  ||| |||| ||||||||||| |||||||||||||||||    
T  27367600 taattgtcactttacaat-----accaatgtaacatttattagttttttttccactattatacccttatttattgaatttca 27367524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 206
Target Start/End: Complemental strand, 27457947 - 27457871
Alignment:
Q  127 taattgtcactttacaatgcaacaccaatgcaatatttatta--tttgtttcaactattatacctttatttattgaatttca 206  Q
    ||||||||||||||||||     ||||||| || ||||||||  ||| |||| ||||||||||| |||||||||||||||||    
T  27457947 taattgtcactttacaat-----accaatgtaacatttattagttttttttccactattatacccttatttattgaatttca 27457871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 108
Target Start/End: Original strand, 181454 - 181482
Alignment:
Q  80 tctcacaattattgtctctttaacatttt 108  Q
    |||||||||||||||||||||||||||||    
T  181454 tctcacaattattgtctctttaacatttt 181482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 22398411 - 22398463
Alignment:
Q  189 tttatttattgaatttcatccaacttaattgttccactaactacaattaataa 241  Q
    |||||||||||||||||||| ||||||| |  | || ||||||||||||||||    
T  22398411 tttatttattgaatttcatctaacttaactacttcaataactacaattaataa 22398463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 31283526 - 31283490
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaa 216  Q
    ||||||| | |||||||||||||||||||||||||||    
T  31283526 tattatatccttatttattgaatttcatccaacttaa 31283490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 8e-49; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 150 - 332
Target Start/End: Original strand, 31655012 - 31655194
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||| ||||| ||||||||| |||| ||||||||||| |||||||||||||||||| |||| |||||  |||||||||||||||||||||  || ||     
T  31655012 accaatacaataattattatttatttccactattatacccttatttattgaatttcattcaacataattactccactaactacaattaataaggatatta 31655111  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    ||||||||  || ||||||||| ||||||||||| |||||||||||||||| |||||||||| || |||||||||||||||||    
T  31655112 tagtaaatgatattaattttaccattgaaatcaacacaattaatcatttctttaataatcgtacacaaactttaaacgactaa 31655194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 122 - 332
Target Start/End: Original strand, 41496016 - 41496221
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgtt 221  Q
    |||| ||||||||||||||||||     || ||||||| ||||||||||  |||| |||||||||||||||||||||| ||||||||||| |||| |  |    
T  41496016 caaaataattgtcactttacaat-----actaatgcaacatttattattcttttccactattatacctttatttattgcatttcatccaatttaactact 41496110  T
Q  222 ccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactt 321  Q
    ||||||||||||||||||||  |||||||| ||||| | ||||||||||| ||||||||||| ||||||||| |||| | ||||||||||| | |||| |    
T  41496111 ccactaactacaattaataatgatgttttactaaatgcaactaattttaccattgaaatcaacacaattaattatttttttaataatcgtgtacaaacct 41496210  T
Q  322 taaacgactaa 332  Q
    ||| |||||||    
T  41496211 taatcgactaa 41496221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 161 - 329
Target Start/End: Original strand, 4818520 - 4818689
Alignment:
Q  161 atttattatttgtttca-actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatac 259  Q
    ||||||||||| ||||  ||||||||||| ||||||||||||||||||| ||||||||   |||||||||||||||||||||   ||||||||||||| |    
T  4818520 atttattatttttttcccactattatacccttatttattgaatttcatctaacttaatcactccactaactacaattaataagggtgttttagtaaatgc 4818619  T
Q  260 tactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgac 329  Q
    |||||||||||| ||||||||||| ||||||||| |||||  ||||||||||||| |||| |||||||||    
T  4818620 tactaattttacaattgaaatcaacacaattaattatttccttaataatcgtgcacaaaccttaaacgac 4818689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 122 - 326
Target Start/End: Original strand, 8698244 - 8698444
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatatttattatttgttt-caactattatacctttatttattgaatttcatccaacttaattgt 220  Q
    |||| ||||||||||||||||||     | ||||| | |||||||||||| ||| | ||||||||||| |||||||||||||||||||||||||||        
T  8698244 caaaataattgtcactttacaat-----atcaatgtagtatttattattttttttccactattatacccttatttattgaatttcatccaacttaaccac 8698338  T
Q  221 tccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaact 320  Q
    |||||||||||||||||||||   |||||| |||||| | ||||||||||| ||||||||||| |||||||||||||||| ||||||||||||| ||||     
T  8698339 tccactaactacaattaataagggtgttttggtaaatgcaactaattttaccattgaaatcaacacaattaatcatttctttaataatcgtgcacaaacc 8698438  T
Q  321 ttaaac 326  Q
    ||||||    
T  8698439 ttaaac 8698444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 150 - 332
Target Start/End: Complemental strand, 15818636 - 15818452
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||| ||| |||| ||||||| |||||||| |||||||||||| |||||||||||| |||| |  |||||| | |||||||||||||  |||||    
T  15818636 accaatgcaacattaattacttgtttccactattatgcctttatttattaaatttcatccaatttaactactccactgattacaattaataaaggtgttt 15818537  T
Q  250 tagtaaata--ctactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    |||||||||  ||||||||||||| ||||||||||| |||||||| ||||||  ||||||||||||| |||| ||||||||||||    
T  15818536 tagtaaatatgctactaattttaccattgaaatcaacacaattaaacatttccttaataatcgtgcataaaccttaaacgactaa 15818452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 122 - 329
Target Start/End: Complemental strand, 40530402 - 40530199
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatatttattatttgtttca-actattatacctttatttattgaatttcatccaacttaattgt 220  Q
    |||| ||||||||||||||||||     |||||||||  ||||||||||| ||||  ||||||||||| ||||||||| |||||||||||||||||        
T  40530402 caaaataattgtcactttacaat-----accaatgcagcatttattatttatttcccactattatacccttatttatttaatttcatccaacttaaccac 40530308  T
Q  221 tccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaact 320  Q
    |||||||||||||||||||||   ||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||   ||||||||||||| | ||     
T  40530307 tccactaactacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcattttcttaataatcgtgcacagacc 40530208  T
Q  321 ttaaacgac 329  Q
    |||||||||    
T  40530207 ttaaacgac 40530199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 178 - 332
Target Start/End: Original strand, 29570379 - 29570533
Alignment:
Q  178 actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattga 277  Q
    ||||||||||  ||||||||||||||||||||||||||| | ||||| |||||||||||||||||  |||||||| |||||||| ||||||||  ||| |    
T  29570379 actattatactcttatttattgaatttcatccaacttaactattccattaactacaattaataaaggtgttttagcaaatactaataattttaacattaa 29570478  T
Q  278 aatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    |||||| |||||||||||||||| ||||||||||||| |||  ||||||||||||    
T  29570479 aatcaacacaattaatcatttctttaataatcgtgcacaaatcttaaacgactaa 29570533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 150 - 331
Target Start/End: Complemental strand, 6753812 - 6753632
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||| ||||||||| | |||| | ||||||||| ||||||||| ||||||||||||||||| |  |||||||||||||||||||||   | |||    
T  6753812 accaatgcaacatttattatctttttccattattatacccttatttattaaatttcatccaacttaactactccactaactacaattaataagggtattt 6753713  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||  |||||||||||| |||||||| |||| ||||||||||||   ||||||||||||| |||| |||||||||||    
T  6753712 tagtaaatgatactaattttaccattgaaattaata-aattaatcattttcttaataatcgtgcataaaccttaaacgacta 6753632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 180 - 326
Target Start/End: Complemental strand, 8725133 - 8724987
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||  |||||||||||||||||| ||| |||| |  ||||||||||||||||||||| | |||||||||||||  || ||||||||| |||||||    
T  8725133 tattatactattatttattgaatttcattcaagttaactactccactaactacaattaataagtgtgttttagtaaatgatattaattttaccattgaaa 8725034  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaac 326  Q
    |||| |||||||||||||||| ||||||||||||| |||| ||||||    
T  8725033 tcaacacaattaatcatttctttaataatcgtgcacaaaccttaaac 8724987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 122 - 314
Target Start/End: Complemental strand, 6616057 - 6615870
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatatttattatttgttt-caactattatacctttatttattgaatttcatccaacttaattgt 220  Q
    |||| ||||||||||||||||||     ||| |||||| ||||||||||| ||| | ||||||||||| |||||||||||||| ||||||||||||        
T  6616057 caaaataattgtcactttacaat-----acctatgcaacatttattattttttttccactattatacccttatttattgaatt-catccaacttaaccac 6615964  T
Q  221 tccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgca 314  Q
    ||||||||||| |||||||||  ||||||| |||||| ||||||||||||| ||||||||||| ||||||||| |||| | |||||||||||||    
T  6615963 tccactaactaaaattaataaggatgttttggtaaatgctactaattttaccattgaaatcaacacaattaattatttatttaataatcgtgca 6615870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 180 - 326
Target Start/End: Complemental strand, 42803744 - 42803598
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||  |||||||||||||||||||||||||||    |||| ||||||||||||||||   ||||||||||||||||||||||||||| |||||||    
T  42803744 tattatactcttatttattgaatttcatccaacttaaccactccattaactacaattaataatggtgttttagtaaatactactaattttacaattgaaa 42803645  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaac 326  Q
    | || ||||||||| |||||| | ||||||||||| |||| ||||||    
T  42803644 tgaacacaattaattatttctttgataatcgtgcataaaccttaaac 42803598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 161 - 298
Target Start/End: Original strand, 4440991 - 4441128
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatact 260  Q
    ||||||||||| |||| ||||||||||| |||||||||||||||||||||| |||| |  |||||||||||||||||||||| || |||||||||||| |    
T  4440991 atttattatttttttctactattataccgttatttattgaatttcatccaatttaactactccactaactacaattaataaaaatattttagtaaataat 4441090  T
Q  261 actaattttactattgaaatcaatacaattaatcattt 298  Q
    | ||||||||  ||| ||||||| ||||||||| ||||    
T  4441091 attaattttatcattaaaatcaacacaattaattattt 4441128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 163 - 331
Target Start/End: Complemental strand, 2232210 - 2232046
Alignment:
Q  163 ttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactac 262  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |  ||||||||    |||||||||   | ||||| ||||| ||||    
T  2232210 ttattatttttttctactattatacccttatttattgaatttcatccaacttaactactccactaa----aattaataagagttttttaataaatgctac 2232115  T
Q  263 taattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||| ||||||||||| ||||||| ||||||   ||||||||||||| |||| |||||||||||    
T  2232114 taattttaccattgaaatcaacacaattattcattttcttaataatcgtgcacaaaccttaaacgacta 2232046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 180 - 331
Target Start/End: Original strand, 21060619 - 21060770
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||| ||||||||||||||| ||||||||||| |  |||||||||||||||||||||   | |||||||||||| |||||||||||| ||  |||    
T  21060619 tattataccattatttattgaattttatccaacttaactactccactaactacaattaataagagtattttagtaaataatactaattttaccatcaaaa 21060718  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    | || |||||||||||||||  |||||| |||||| |||| |||||||||||    
T  21060719 taaacacaattaatcatttccctaataaccgtgcataaaccttaaacgacta 21060770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 161 - 331
Target Start/End: Original strand, 40899888 - 40900058
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatact 260  Q
    ||||||||||  |||| | ||||||||| ||||||||||||||||||| ||||||| |  |||||||||||||||||||||   |||||||||||||  |    
T  40899888 atttattattattttccattattatacccttatttattgaatttcatctaacttaactactccactaactacaattaataagggtgttttagtaaatgat 40899987  T
Q  261 actaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||| | ||  ||||||| |||||||||||||||  |||||| |||||| |||| ||||| |||||    
T  40899988 actaattttgccatcaaaatcaacacaattaatcatttccttaataaccgtgcataaaccttaaatgacta 40900058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 180 - 329
Target Start/End: Original strand, 27542784 - 27542933
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||  ||||||||||||||| ||||||||||| |  |||||||||||||||||||||   | |||||||||||  || ||||||||| |||||||    
T  27542784 tattatactcttatttattgaattttatccaacttaactactccactaactacaattaataagagtattttagtaaatggtattaattttaccattgaaa 27542883  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgac 329  Q
    |||| ||||| |||||||||  ||||||||||||| |||| |||||||||    
T  27542884 tcaacacaatcaatcatttccttaataatcgtgcacaaaccttaaacgac 27542933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 152 - 328
Target Start/End: Complemental strand, 7828078 - 7827902
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||||||||||||||||| | |||  | ||||||| | ||||||||| ||||||||||||||||| |  |||||||||||||||||||||   | |||||    
T  7828078 caatgcaatatttattatcttttttcattattatatccttatttattaaatttcatccaacttaactactccactaactacaattaataagggtatttta 7827979  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacga 328  Q
     |||||  |||||||||||| ||||||||||| ||||||||| ||||   ||||||||||| | |||| ||||||||    
T  7827978 ataaatgatactaattttaccattgaaatcaacacaattaattattttcttaataatcgtgtacaaaccttaaacga 7827902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 150 - 314
Target Start/End: Original strand, 19929905 - 19930069
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||| ||||||||||  |||| | ||||||||| ||||||||||||||||||||||||||| | || |||||||||||||||||||  ||||||    
T  19929905 accaatgcaacatttattattattttccattattatacccttatttattgaatttcatccaacttaactatttcactaactacaattaataaggatgttt 19930004  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgca 314  Q
    ||||||||    ||| |||||| ||  ||||||| | ||||||||||||   |||||||||||||    
T  19930005 tagtaaatgacgctagttttaccatcaaaatcaacaaaattaatcattttcttaataatcgtgca 19930069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 178 - 332
Target Start/End: Complemental strand, 22848510 - 22848356
Alignment:
Q  178 actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattga 277  Q
    ||||||||||| ||||||||||||||||||||||  ||| |  |||| ||||||||||||||||   ||||||| ||||||||| |||||||||||||||    
T  22848510 actattatacccttatttattgaatttcatccaatctaactactccattaactacaattaataagggtgttttaataaatactattaattttactattga 22848411  T
Q  278 aatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    |||||| ||||||||||  |||  |||||||| || | || | ||||||||||||    
T  22848410 aatcaacacaattaatcgcttccttaataatcttgtacaagccttaaacgactaa 22848356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 150 - 331
Target Start/End: Complemental strand, 6315931 - 6315750
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||| ||||||||||  |||| | ||||||||| ||||||||||||||||||||||||||| |  | |||||||||||||||||||   | |||    
T  6315931 accaatgcaacatttattattattttccattattatacccttatttattgaatttcatccaacttaactacttcactaactacaattaataagggtattt 6315832  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||  || ||||||||  |||||||| || ||||| |||||||||  ||||||||| | | || | |||||||||||    
T  6315831 tagtaaatgatattaattttatcattgaaattaacacaatcaatcatttccttaataatcgagtacaacccttaaacgacta 6315750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 150 - 298
Target Start/End: Original strand, 6753988 - 6754135
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||| |||| || ||| |||| |  | |||||| ||||||||||||||||||||||||||| |  |||||||||||||||||||||   |||||    
T  6753988 accaatgcaacattttttttttttttccatcaatatacccttatttattgaatttcatccaacttaactactccactaactacaattaataagagtgttt 6754087  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcattt 298  Q
    ||||||||   | ||||||||||||||||||||| | ||||||||||||    
T  6754088 tagtaaatgacattaattttactattgaaatcaaca-aattaatcattt 6754135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 181 - 331
Target Start/End: Complemental strand, 30512809 - 30512658
Alignment:
Q  181 attatacctttatttattgaatttcatccaacttaattgttccactaactacaa-ttaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    |||||| | ||||||||| ||||||||||||||||| | || |||||||||||  |||||||   | | |||||||||  |  ||||||||| |||||||    
T  30512809 attatatccttatttattaaatttcatccaacttaactatttcactaactacatgttaataagagtatcttagtaaatgatgttaattttaccattgaaa 30512710  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||||||||||||||  ||||||||||||| |||||||| |||||||    
T  30512709 tcaatacaattaatcatttccttaataatcgtgcataaactttatacgacta 30512658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 181 - 331
Target Start/End: Complemental strand, 30553149 - 30552998
Alignment:
Q  181 attatacctttatttattgaatttcatccaacttaattgttccactaactacaa-ttaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    |||||| | ||||||||| ||||||||||||||||| | || |||||||||||  |||||||   | | |||||||||  |  ||||||||| |||||||    
T  30553149 attatatccttatttattaaatttcatccaacttaactatttcactaactacatgttaataagagtatcttagtaaatgatgttaattttaccattgaaa 30553050  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||||||||||||||  ||||||||||||| |||||||| |||||||    
T  30553049 tcaatacaattaatcatttccttaataatcgtgcataaactttatacgacta 30552998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 180 - 325
Target Start/End: Original strand, 27580589 - 27580735
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    |||||||| |||||||| | |||||||| |||||||| |  |||||||||||||||||||||   | |||||||||||  || ||||||||| |||||||    
T  27580589 tattatacatttatttaattaatttcattcaacttaactactccactaactacaattaataagggtattttagtaaatgatattaattttaccattgaaa 27580688  T
Q  280 tcaatacaattaatcattt-ctataataatcgtgcaaaaactttaaa 325  Q
    |||| |||||||||||||| ||| | |||||||||| |||| |||||    
T  27580689 tcaacacaattaatcatttcctaaattaatcgtgcagaaaccttaaa 27580735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 178 - 298
Target Start/End: Original strand, 29374329 - 29374449
Alignment:
Q  178 actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattga 277  Q
    ||||||||||| ||||||||||||||| || ||| |||| |  ||||||||||||||||||||||  | ||||||||||| ||| ||||||||  |||||    
T  29374329 actattatacccttatttattgaattttattcaatttaactactccactaactacaattaataaaggtcttttagtaaatgctattaattttatcattga 29374428  T
Q  278 aatcaatacaattaatcattt 298  Q
    |||||| | ||||||||||||    
T  29374429 aatcaacataattaatcattt 29374449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 331
Target Start/End: Complemental strand, 1248756 - 1248577
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||||||| ||||||||||  |||  | ||||||||| ||||| ||||||||| || |||||||| |  | |||||||||||||||||||   | |||||    
T  1248756 caatgcaacatttattattatttttcattattatacccttattaattgaattttattcaacttaactacttcactaactacaattaataagggtatttta 1248657  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||  || ||||||||| ||||||||||| | ||||||| |||||  |||||| |||||| |||  |||||||||||    
T  1248656 gtaaatgatattaattttaccattgaaatcaacataattaataatttccttaataaccgtgcacaaatcttaaacgacta 1248577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 298
Target Start/End: Complemental strand, 37184229 - 37184085
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    ||||| ||||||||||||||  || || |||||||  |||||||||||||||||||| ||||||||   || | |||||||||| |||||| || |||||    
T  37184229 caatgaaatatttattattt--ttaaattattatatatttatttattgaatttcatcaaacttaatcagtctattaactacaatgaataaagatatttta 37184132  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcattt 298  Q
    ||||||  || ||||||||| |||||||||||  |||||||||||||    
T  37184131 gtaaatgatattaattttaccattgaaatcaactcaattaatcattt 37184085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 163 - 332
Target Start/End: Original strand, 9515708 - 9515887
Alignment:
Q  163 ttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaat----------taataaatatgttttag 252  Q
    ||||||||  |||| ||||||||||  ||||||| |||||||||| |||||||| |  |||||||||||| ||          ||||||  |||||||||    
T  9515708 ttattattattttccactattatactcttatttaatgaatttcattcaacttaactactccactaactactatgacctactattaataaggatgttttag 9515807  T
Q  253 taaatactactaattttactattgaaatcaatacaattaatcatt-tctataataatcgtgcaaaaactttaaacgactaa 332  Q
    |||||  |||||||||||| ||||||||||| ||||||||||||| ||| ||||||||||||| |||| ||||||||||||    
T  9515808 taaatgatactaattttaccattgaaatcaacacaattaatcattatct-taataatcgtgcacaaaccttaaacgactaa 9515887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 150 - 270
Target Start/End: Complemental strand, 41062313 - 41062194
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||| ||||||||||| |||| | ||| ||||| |||||||||||| | |||||| ||||||| ||| ||||||||||||||||||   |||||    
T  41062313 accaatgcaacatttattattt-tttccattataatacccttatttattgaactccatccagcttaattattctactaactacaattaataagggtgttt 41062215  T
Q  250 tagtaaatactactaatttta 270  Q
    ||||||||  |||||||||||    
T  41062214 tagtaaatgatactaatttta 41062194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 153 - 299
Target Start/End: Complemental strand, 15439469 - 15439324
Alignment:
Q  153 aatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttag 252  Q
    ||||||| ||||||||||  ||| || ||||||||| ||||||||| ||||  ||| ||||||| |  | | |||| |||||||||||||  | ||||||    
T  15439469 aatgcaacatttattattatttttaattattatacccttatttattaaatta-atcaaacttaactactactctaaatacaattaataaaagtattttag 15439371  T
Q  253 taaatactactaattttactattgaaatcaatacaattaatcatttc 299  Q
    |||||  |||||||||||| |||||||| ||||||||||||||||||    
T  15439370 taaatgatactaattttaccattgaaattaatacaattaatcatttc 15439324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 298
Target Start/End: Original strand, 18841477 - 18841586
Alignment:
Q  189 tttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaa 288  Q
    |||||||||||||||||| |||| |||||| || |||||||||||||||||||   | ||||| |||||  || ||||||||| ||| ||||||||| ||    
T  18841477 tttatttattgaatttcacccaatttaattatttcactaactacaattaataacggtattttattaaatgatattaattttaccatttaaatcaatataa 18841576  T
Q  289 ttaatcattt 298  Q
    ||||||||||    
T  18841577 ttaatcattt 18841586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 166 - 298
Target Start/End: Complemental strand, 11796305 - 11796173
Alignment:
Q  166 ttatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaa 265  Q
    |||||| |||| |||| |||||  ||||||||| ||||||||| ||||||| |  | |||||||||||||||||||  || |||||||||||| || |||    
T  11796305 ttatttttttccactagtatactcttatttattaaatttcatctaacttaactactacactaactacaattaataataatattttagtaaataatattaa 11796206  T
Q  266 ttttactattgaaatcaatacaattaatcattt 298  Q
    |||||  ||| ||||||| |||||||| |||||    
T  11796205 ttttatcattaaaatcaacacaattaaccattt 11796173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 41478744 - 41478810
Alignment:
Q  152 caatgcaatatttattatt--tgtttcaactattatacctttatttattgaatttcatccaacttaa 216  Q
    |||||||| ||||||||||  | |||| |||||||||||||||||||||||||||||||||||||||    
T  41478744 caatgcaacatttattattattttttctactattatacctttatttattgaatttcatccaacttaa 41478810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 41480124 - 41480176
Alignment:
Q  163 ttattatttgtttcaactattatacctttatttattgaatttcatccaacttaa 216  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  41480124 ttattatttttttca-ctattatacctttatttattgaatttcatccaacttaa 41480176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 331
Target Start/End: Original strand, 41478815 - 41478967
Alignment:
Q  179 ctattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataa-atatgttttagtaaatactactaattttactattga 277  Q
    |||||||||| ||||||||||||||||||| ||||||| |  |||| ||||| ||||||| ||   || |||||||||||   ||||||||||| |||||    
T  41478815 ctattatacccttatttattgaatttcatctaacttaact-atccattaactgcaattaacaagggatattttagtaaatgacactaattttaccattga 41478913  T
Q  278 aatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||| |  ||||||||||||||   ||| ||||| ||| |||| ||| |||||||    
T  41478914 aataagcacaattaatcattttcttaaaaatcgcgcacaaaccttagacgacta 41478967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 331
Target Start/End: Original strand, 41492290 - 41492442
Alignment:
Q  179 ctattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataa-atatgttttagtaaatactactaattttactattga 277  Q
    |||||||||| ||||||||||||||||||| ||||||| |  |||| |||||||| |||| ||   || |||||||||||   ||||||||||| |||||    
T  41492290 ctattatacccttatttattgaatttcatctaacttaact-atccattaactacatttaacaagggatattttagtaaatgtcactaattttaccattga 41492388  T
Q  278 aatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||| |  ||||||||||||||   ||| ||||| ||| |||| ||| |||||||    
T  41492389 aataagcacaattaatcattttcttaaaaatcgcgcacaaaccttagacgacta 41492442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 258
Target Start/End: Complemental strand, 3348284 - 3348176
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||  ||||||||||| |||| | ||| ||| | |||||||||||| ||||||||||||||||  | ||| ||||||| |||||||   |||||    
T  3348284 accaatgcagcatttattatttttttccattataatatccttatttattgaacttcatccaacttaattacttcaccaactacatttaataagggtgttt 3348185  T
Q  250 tagtaaata 258  Q
    || ||||||    
T  3348184 taataaata 3348176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 331
Target Start/End: Original strand, 11904192 - 11904346
Alignment:
Q  178 actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaata-tgttttagtaaatactactaattttactattg 276  Q
    ||||||||| | ||| ||||||| ||| ||| || |||| |  ||||| ||||||||||||  || | | |||||||||||  || |||||||| |||||    
T  11904192 actattatagccttaattattgatttttatcgaatttaactactccaccaactacaattaaataagagtattttagtaaatgatattaattttattattg 11904291  T
Q  277 aaatcaatacaattaatca-tttctataataatcgtgcaaaaactttaaacgacta 331  Q
    || |||||||||||||||| ||||| |||  |||||||| |||| |||||||||||    
T  11904292 aactcaatacaattaatcactttct-taaagatcgtgcacaaacattaaacgacta 11904346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 331
Target Start/End: Original strand, 32440174 - 32440281
Alignment:
Q  224 actaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaacttta 323  Q
    ||||| ||||||||||||   | |||||||||||  || ||||||||  |||||||| || |||||||||||||||| ||| |||| |||| |||| ||     
T  32440174 actaagtacaattaataagggtattttagtaaatgatattaattttatcattgaaattaacacaattaatcatttctttaaaaatcatgcacaaaccttt 32440273  T
Q  324 aacgacta 331  Q
    ||||||||    
T  32440274 aacgacta 32440281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 41492248 - 41492285
Alignment:
Q  179 ctattatacctttatttattgaatttcatccaacttaa 216  Q
    |||||||| |||||||||||||||||||||||||||||    
T  41492248 ctattatatctttatttattgaatttcatccaacttaa 41492285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 108
Target Start/End: Complemental strand, 2232291 - 2232260
Alignment:
Q  77 tcgtctcacaattattgtctctttaacatttt 108  Q
    ||||||||||||||||||||||||||||||||    
T  2232291 tcgtctcacaattattgtctctttaacatttt 2232260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 10598294 - 10598228
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaa 216  Q
    ||||||| | || ||||| ||| |||||||| ||||| ||||||||||| ||||| |||||||||||    
T  10598294 accaatgtagtagttattttttttttcaactgttatatctttatttattaaattttatccaacttaa 10598228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 298
Target Start/End: Complemental strand, 26285598 - 26285484
Alignment:
Q  184 atacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaa 283  Q
    |||| |||||||||||||||| || |||||||| |  | || |||||||||||||||  | ||||||  |||||  ||||||||||||  || |||||||    
T  26285598 atacatttatttattgaattttatacaacttaactacttcattaactacaattaatacgtgtgttttcataaatgatactaattttaccgttaaaatcaa 26285499  T
Q  284 tacaattaatcattt 298  Q
      ||| |||||||||    
T  26285498 gtcaactaatcattt 26285484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 41495978 - 41496007
Alignment:
Q  79 gtctcacaattattgtctctttaacatttt 108  Q
    ||||||||||||||||||||||||||||||    
T  41495978 gtctcacaattattgtctctttaacatttt 41496007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 37101347 - 37101274
Alignment:
Q  160 tatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaat 235  Q
    |||||||||||| |||  | |||||||  |||||||||||||||||||| || ||||||  || ||||||||||||    
T  37101347 tatttattattttttt--attattatatttttatttattgaatttcatcaaatttaattactctactaactacaat 37101274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 38161515 - 38161459
Alignment:
Q  201 atttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaat 257  Q
    |||||||||||||||| |  |||||||||||| ||||||||  || |||||||||||    
T  38161515 atttcatccaacttaactactccactaactacgattaataaggatattttagtaaat 38161459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 2e-46; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 150 - 332
Target Start/End: Original strand, 22738668 - 22738849
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    ||||||| || ||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||| |  || |||||||||||||||| |  || |||    
T  22738668 accaatggaacatttattattt-tttccactattatacctttatttattaaatttcatccaacttaactaatctactaactacaattaatgaggatattt 22738766  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    ||||||||  |||||||||||| ||||||||| | |||||||||||||||| ||||||||||||| |||| ||||||||||||    
T  22738767 tagtaaatgatactaattttaccattgaaatctacacaattaatcatttctttaataatcgtgcataaaccttaaacgactaa 22738849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 150 - 331
Target Start/End: Original strand, 34947466 - 34947647
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||| ||||||||||| |||| | ||||||||| | ||||||||||||||||||||||||| |  |||||||||||||||||||||   |||||    
T  34947466 accaatgcaacatttattatttttttccattattataccctcatttattgaatttcatccaacttaactactccactaactacaattaataagggtgttt 34947565  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||  || ||||||||| ||||||||||| |||||||||||||||| |||||| | |||| |||| |||||||||||    
T  34947566 tagtaaatgataataattttaccattgaaatcaacacaattaatcatttctttaataaacatgcacaaaccttaaacgacta 34947647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 122 - 332
Target Start/End: Complemental strand, 21350812 - 21350609
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatatttattatttgttt-caactattatacctttatttattgaatttcatccaacttaattgt 220  Q
    |||| ||||||||||||||||||     |||||||||  ||||||||||| ||| | ||||||||||| ||||||||||||||||||||||||||| |      
T  21350812 caaaataattgtcactttacaat-----accaatgcagcatttattattttttttccactattatacccttatttattgaatttcatccaacttaactac 21350718  T
Q  221 tccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaact 320  Q
    |||||||||||||||||||||   ||||||||||||||| |||| |||||| ||||||||||| |||||||   |||||  ||||||||||||| ||||     
T  21350717 tccactaactacaattaataagggtgttttagtaaatacaactatttttaccattgaaatcaacacaatta---atttccttaataatcgtgcacaaacc 21350621  T
Q  321 ttaaacgactaa 332  Q
    ||||||||||||    
T  21350620 ttaaacgactaa 21350609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 152 - 332
Target Start/End: Complemental strand, 11373589 - 11373409
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||||||  ||||||||||| || | ||||||||||  ||||||||||||||||||||||||||| |  |||||||||||||||||||||   |||||||    
T  11373589 caatgcagcatttattattttttcccactattatactcttatttattgaatttcatccaacttaactactccactaactacaattaataagggtgtttta 11373490  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    |||||| ||||||||||||| || |||||||| |||||||| ||||||  ||||||||||||| || | ||||||||||||    
T  11373489 gtaaatgctactaattttaccatcgaaatcaacacaattaaacatttccttaataatcgtgcacaatccttaaacgactaa 11373409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 152 - 324
Target Start/End: Complemental strand, 41506226 - 41506054
Alignment:
Q  152 caatgcaatatttatta-tttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttt 250  Q
    ||||||||||||||||| ||| |||||| ||||||||  ||||||||||||||||||||||||||| |  |||||||||||||||||||||   ||||||    
T  41506226 caatgcaatatttattaatttttttcaa-tattatactcttatttattgaatttcatccaacttaactactccactaactacaattaataagagtgtttt 41506128  T
Q  251 agtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaa 324  Q
    ||||||| ||||||||||||| ||| |||| || |||||||||||||||  ||||||||||||| |||| ||||    
T  41506127 agtaaatgctactaattttaccattaaaattaacacaattaatcatttccttaataatcgtgcataaaccttaa 41506054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 152 - 332
Target Start/End: Complemental strand, 24516450 - 24516270
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||||||| ||||||||| | || | |||||| || ||||||||||||||||||||||||||||| |  |||||||||||||||||||||   | |||||    
T  24516450 caatgcaacatttattatcttttcccactattttatctttatttattgaatttcatccaacttaactactccactaactacaattaataaggttttttta 24516351  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    ||||||  |||||||||||| ||||||||||| ||||||||||||||   ||||||||||| | |||| ||||||||||||    
T  24516350 gtaaatgttactaattttaccattgaaatcaacacaattaatcattttattaataatcgtgtataaaccttaaacgactaa 24516270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 127 - 311
Target Start/End: Complemental strand, 34100728 - 34100549
Alignment:
Q  127 taattgtcactttacaatgcaacaccaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccact 226  Q
    ||||||||||||||||||     || ||||||| ||||||||| | |||  ||||||||||| ||||||||||||| ||||||||||||| |  | || |    
T  34100728 taattgtcactttacaat-----actaatgcaacatttattatgttttttcactattatacccttatttattgaatgtcatccaacttaactacttcagt 34100634  T
Q  227 aactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgt 311  Q
    |||||||||||||||| || ||||||||||| ||||||||||||||||||||||||| ||||||||||||||   ||||||||||    
T  34100633 aactacaattaataaagatattttagtaaatgctactaattttactattgaaatcaacacaattaatcattttcttaataatcgt 34100549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 150 - 332
Target Start/End: Original strand, 2459437 - 2459617
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||  ||||||||||| |||  ||||||||||| |||||||||||||||||||| |||||| |  |||||||||||||||||||||   ||||     
T  2459437 accaatgcagcatttattattttttttcactattatacccttatttattgaatttcatcctacttaactactccactaactacaattaataagggtgttg 2459536  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    ||||||||   |||||||||||  |||||||||| |||||||||||||||  ||||||||||||| |||| ||||||||||||    
T  2459537 tagtaaat--gactaattttaccgttgaaatcaacacaattaatcatttccttaataatcgtgcacaaacattaaacgactaa 2459617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 150 - 331
Target Start/End: Complemental strand, 759254 - 759073
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||  ||||||||||| |||| | ||||||||| ||||||||||||||||||||||||||| |  ||| |||||||||||||||||  ||||||    
T  759254 accaatgcagcatttattatttttttccattattatacccttatttattgaatttcatccaacttaactactccgctaactacaattaataaggatgttt 759155  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||  ||||| |||||| ||  ||||||| |||||||||||||||  ||||||| ||||| |||| ||||| |||||    
T  759154 tagtaaatgatactagttttaccatcaaaatcaacacaattaatcatttccttaataattgtgcataaaccttaaatgacta 759073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 152 - 332
Target Start/End: Complemental strand, 8592601 - 8592421
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||||||  ||||||||||| || | ||||||||||  ||||||||| ||||||||| ||||| | |  |||||||||||||||||||||   |||||||    
T  8592601 caatgcagcatttattattttttcctactattatactcttatttattaaatttcatctaactttactactccactaactacaattaataagggtgtttta 8592502  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
     |||||||||||||||| || ||||||||||| |||||||||||||||| |||||||| |||| |||| ||||||| ||||    
T  8592501 ttaaatactactaatttaaccattgaaatcaacacaattaatcatttctttaataatcatgcacaaaccttaaacggctaa 8592421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 150 - 332
Target Start/End: Complemental strand, 19271895 - 19271714
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||| ||||||||||| || ||| ||||||||| ||||||||| | ||||||||||||||| |  ||||||||||||||||||||||  | |||    
T  19271895 accaatgcaacatttattattttttccaa-tattatacccttatttattaattttcatccaacttaactactccactaactacaattaataaaagtattt 19271797  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    |||| ||| | |||||||| |  ||||||||||| |||||||||||||| | ||||||||||||| || | ||||||||||||    
T  19271796 tagtcaatgccactaatttgatcattgaaatcaacacaattaatcatttttttaataatcgtgcacaagcattaaacgactaa 19271714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 180 - 328
Target Start/End: Original strand, 38391744 - 38391892
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||   |||||||||||||  |||||||||||| ||  |||    
T  38391744 tattatacttttatttattgaatttcatccaacttaattattccactaactacaattaacaagagtgttttagtaaatgatactaattttaccatcaaaa 38391843  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacga 328  Q
    |||| ||||||||||||||   ||||||| ||||| |||| ||||||||    
T  38391844 tcaacacaattaatcattttcttaataattgtgcataaaccttaaacga 38391892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 163 - 329
Target Start/End: Original strand, 28103712 - 28103878
Alignment:
Q  163 ttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactac 262  Q
    ||||| ||| |||| ||||||||||  |||||||||||||||||||||||||||    | |||||||||||||||||||   |||||| |||||| || |    
T  28103712 ttattttttttttccactattatacgcttatttattgaatttcatccaacttaaccacttcactaactacaattaataagggtgttttggtaaatgctgc 28103811  T
Q  263 taattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgac 329  Q
    ||||||||| ||||||||||| ||||||||||||||   ||||||||||||| |||| |||||||||    
T  28103812 taattttaccattgaaatcaacacaattaatcattttcttaataatcgtgcacaaaccttaaacgac 28103878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 173 - 329
Target Start/End: Original strand, 5524366 - 5524525
Alignment:
Q  173 tttcaactattatacctttatttattga---atttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaatttt 269  Q
    |||| ||||||||||||||||||||| |   |||||||||||||||| |  || |||||||| ||||||||||  ||||||| |||||  ||||||||||    
T  5524366 tttccactattatacctttatttattaataaatttcatccaacttaactactcaactaactataattaataaaagtgttttattaaatgttactaatttt 5524465  T
Q  270 actattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgac 329  Q
    || ||||||||||| ||||||||||||||   ||||||||||||| ||||||||||||||    
T  5524466 accattgaaatcaacacaattaatcattttcttaataatcgtgcacaaactttaaacgac 5524525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 122 - 332
Target Start/End: Original strand, 7463155 - 7463361
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgtt 221  Q
    |||| |||| |||||||||||||  ||||  ||||||  ||||||||||  |||  |||||| || ||||||||||||||||||||||||||||| |  |    
T  7463155 caaaataatcgtcactttacaat--aaca--aatgcatcatttattattatttttcactattctatctttatttattgaatttcatccaacttaactact 7463250  T
Q  222 ccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactt 321  Q
    |||||||||||||||||| |   | ||| ||||||| ||||||||||||  ||||||||||| |||||||||||||||  |||||| |||||| || | |    
T  7463251 ccactaactacaattaatgagggtatttaagtaaatgctactaattttatcattgaaatcaacacaattaatcatttccttaataaccgtgcacaatcct 7463350  T
Q  322 taaacgactaa 332  Q
    |||||||||||    
T  7463351 taaacgactaa 7463361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 154 - 332
Target Start/End: Complemental strand, 46478453 - 46478274
Alignment:
Q  154 atgcaatatttattatttgttt-caactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttag 252  Q
    |||||| ||||||||||| ||| | ||||||||||  ||||||||||||||||||||||||||| |  || | ||||||||||||||||   | ||||||    
T  46478453 atgcaacatttattattttttttccactattatactcttatttattgaatttcatccaacttaactactcaattaactacaattaataagggtattttag 46478354  T
Q  253 taaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    ||||| ||||||| ||||||||| |||| || ||||||||||||||   ||||||||||| |  ||||||||||||||||    
T  46478353 taaatgctactaactttactattaaaattaacacaattaatcatttaattaataatcgtgtatgaactttaaacgactaa 46478274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 150 - 331
Target Start/End: Original strand, 83350 - 83532
Alignment:
Q  150 accaatgcaatatttattatttgttt-caactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtt 248  Q
    |||||||||  ||||||||||| ||| | | ||| ||||  ||||||||||||||||||| ||||||| |  ||| |||||||||||||||||  |||||    
T  83350 accaatgcagcatttattattttttttccattatcatactcttatttattgaatttcatcaaacttaactactccgctaactacaattaataagaatgtt 83449  T
Q  249 ttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||||||  |||||||||||| ||  ||||||| |||||||||||||||  ||||||| ||||| |||| |||||||||||    
T  83450 ttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttccttaataattgtgcataaaccttaaacgacta 83532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 152 - 325
Target Start/End: Complemental strand, 7457581 - 7457409
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||||||| ||||||||||| |||| ||||||||||  ||||||||||||||| ||  ||||||||| |||| ||||||||| |||||||   | |||||    
T  7457581 caatgcaacatttattattt-tttccactattatactcttatttattgaatttaatttaacttaattattccgctaactacatttaataagggtctttta 7457483  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaa 325  Q
    ||||||   ||||||||||| ||||||||||| | |||||||||||| | ||||||||||||| |||| |||||    
T  7457482 gtaaatgtaactaattttaccattgaaatcaacataattaatcatttttttaataatcgtgcacaaacattaaa 7457409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 150 - 330
Target Start/End: Original strand, 21390260 - 21390441
Alignment:
Q  150 accaatgcaatatttattatttgttt-caactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtt 248  Q
    ||||||||||  |||||||||| ||| | | ||||||||| ||||||||||||||||||| ||||||| |  ||||||||||||||| |||||  |||||    
T  21390260 accaatgcaacgtttattattttttttccattattatacccttatttattgaatttcatctaacttaactactccactaactacaatcaataaggatgtt 21390359  T
Q  249 ttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgact 330  Q
    |||||||||  || || |||||| ||  |||| || |||||||||||||||  ||||||||||||| |||| ||||||||||    
T  21390360 ttagtaaatgatattagttttaccatcaaaattaacacaattaatcatttccttaataatcgtgcataaaccttaaacgact 21390441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 224 - 332
Target Start/End: Original strand, 12631345 - 12631453
Alignment:
Q  224 actaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaacttta 323  Q
    ||||||||||||||||||  |||||||  ||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||| |||| |||    
T  12631345 actaactacaattaataaggatgttttgataaatactactaattttactattgaaatcaatacaattaattatttccttaataatcgtgcacaaacctta 12631444  T
Q  324 aacgactaa 332  Q
    || ||||||    
T  12631445 aatgactaa 12631453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 150 - 331
Target Start/End: Original strand, 40076284 - 40076462
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||  ||||||||||| |||| | ||| | ||| ||||||||||||||||||||||||||| |  ||   ||| ||||||||||||   |||||    
T  40076284 accaatgcagcatttattatttttttccattatcacacccttatttattgaatttcatccaacttaactaatc---taagtacaattaataatagtgttt 40076380  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||  |||||||||||| ||  |||| || |||||||||||||||| ||||||||||||| |||| |||||||||||    
T  40076381 tagtaaatgatactaattttaccatcaaaattaacacaattaatcatttctttaataatcgtgcataaaccttaaacgacta 40076462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 159 - 331
Target Start/End: Complemental strand, 3178358 - 3178186
Alignment:
Q  159 atatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaata 258  Q
    ||||||||||| | || | | || |||||| ||||||||||||||||||||||||||| |  ||||||||||||||||||||||  |||||||||||||     
T  3178358 atatttattatgttttcccattaatatacccttatttattgaatttcatccaacttaactactccactaactacaattaataaaggtgttttagtaaatg 3178259  T
Q  259 ctactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
     || ||||||||| ||  ||||||| ||||| ||||||||   |||||||| |||| |||| |||||| ||||    
T  3178258 atattaattttaccatcaaaatcaacacaatcaatcatttacttaataatcatgcacaaaccttaaacaacta 3178186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 122 - 294
Target Start/End: Original strand, 37245633 - 37245799
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgtt 221  Q
    |||| ||||||||||||||||||     |||||||||| ||||||||||| ||   ||||||||||| |||||||||||||||||||||||||||    |    
T  37245633 caaaataattgtcactttacaat-----accaatgcaacatttattattttttctcactattatacccttatttattgaatttcatccaacttaaccact 37245727  T
Q  222 ccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatc 294  Q
    ||||| | ||||||||||||   ||||||||||||| ||||||| ||||| ||||||||||| | ||||||||    
T  37245728 ccacttattacaattaataagagtgttttagtaaatgctactaa-tttaccattgaaatcaacagaattaatc 37245799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 180 - 331
Target Start/End: Original strand, 9785984 - 9786135
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||| ||||||||||||||| ||||||||||| |  | |||||||||||||||||||   |||||||||||||   | ||||||||| ||  |||    
T  9785984 tattatacccttatttattgaattttatccaacttaactacttcactaactacaattaataagcgtgttttagtaaatgaaattaattttaccatcaaaa 9786083  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||| |||||||||||||||  ||||||||||||| | || |||||||||||    
T  9786084 tcaacacaattaatcatttccttaataatcgtgcacagaccttaaacgacta 9786135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 180 - 327
Target Start/End: Original strand, 30865963 - 30866110
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||| ||||||||||||||||||||| ||||||| |  |||||||| || |||||||||   | |||||||||||  || ||||| ||| |||||||    
T  30865963 tattatatctttatttattgaatttcatctaacttaactactccactaattataattaataagagtattttagtaaatgatattaattataccattgaaa 30866062  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacg 327  Q
    | || |||||||||||||||| ||||||||||||| |||| |||||||    
T  30866063 ttaacacaattaatcatttctttaataatcgtgcacaaaccttaaacg 30866110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 178 - 331
Target Start/End: Original strand, 26974020 - 26974176
Alignment:
Q  178 actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatact---actaattttactat 274  Q
    |||||||||| |||||||| | |||||||| |||||||| |  |||||||||||||||||||||   | |||||||||||  |   | ||||||||| ||    
T  26974020 actattatacatttatttaataaatttcattcaacttaactactccactaactacaattaataagagtattttagtaaatgatgatattaattttaccat 26974119  T
Q  275 tgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||| |||||||||||||||  ||||||||||||| |||| |||||||||||    
T  26974120 tgaaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgacta 26974176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 161 - 331
Target Start/End: Complemental strand, 28202461 - 28202291
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatact 260  Q
    ||||||||||| |||| | ||||||||  ||||||||||||||||||||||||| | |  |||||||||||||||||||||  ||||||||||||||       
T  28202461 atttattatttttttccattattatactcttatttattgaatttcatccaactttactactccactaactacaattaataaggatgttttagtaaatgac 28202362  T
Q  261 actaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    | ||||||||| ||  ||||||| ||||||||| ||||   |||||| |||||| |||| |||||| ||||    
T  28202361 attaattttaccatcaaaatcaacacaattaattattttcttaataaccgtgcataaaccttaaacaacta 28202291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 163 - 331
Target Start/End: Original strand, 16904359 - 16904526
Alignment:
Q  163 ttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactac 262  Q
    ||||||||| |||| ||||||||||| ||||||||||||||| ||||||||||||| || ||||||||| ||||||||    | |||||| || |  ||     
T  16904359 ttattattt-tttccactattatacccttatttattgaatttgatccaacttaattatttcactaactataattaatacgagtattttagaaagtgataa 16904457  T
Q  263 taattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||||||||||||||| ||||||||||||||   ||| |||  |||| |||| |||||||||||    
T  16904458 taattttactattgaaatcaacacaattaatcattttcttaaaaattttgcacaaaccttaaacgacta 16904526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 122 - 311
Target Start/End: Original strand, 33819155 - 33819341
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatatttattatt--tgtttcaactattatacctttatttattgaatttcatccaacttaattg 219  Q
    |||| ||||||||||||||||||     |||||||||  ||||||||||  | |||  ||||||||||| ||||||| |||||||||| |||||| | |     
T  33819155 caaaataattgtcactttacaat-----accaatgcagcatttattattattattttcactattatacccttatttaatgaatttcattcaacttcacta 33819249  T
Q  220 ttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgt 311  Q
     ||||| ||| |||||||||||   || ||| |||||| ||||||||||||| ||||||||||| |||||||||||||||  ||||||||||    
T  33819250 ctccacaaacaacaattaataagagtgattttgtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataatcgt 33819341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 152 - 331
Target Start/End: Complemental strand, 21760145 - 21759966
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||||||| ||||||||| | ||||   ||||||||| | | ||||||||||||||||||||||| |  |||| |||||||||||| |||   |||||||    
T  21760145 caatgcaacatttattatatttttcctttattataccctcaattattgaatttcatccaacttaactactccattaactacaattagtaagggtgtttta 21760046  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
     |||||  |||||||||||| ||  ||||||| ||||||||||||||   |||||||| |||| |||| |||||||||||    
T  21760045 ttaaatgatactaattttaccatcaaaatcaacacaattaatcattttcttaataatcatgcacaaaccttaaacgacta 21759966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 161 - 328
Target Start/End: Complemental strand, 29835565 - 29835399
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatact 260  Q
    |||||||||||  ||| ||||||||| |||||||||||||||| ||||||||| || |  |||  ||||| ||||||||||   ||||||||||||| ||    
T  29835565 atttattattttgttccactattatatctttatttattgaattacatccaact-aactactccgttaactgcaattaataagagtgttttagtaaatgct 29835467  T
Q  261 actaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacga 328  Q
    ||||||||||| ||| ||||||| | |||||||||||||  |||||| || ||| |||| ||||||||    
T  29835466 actaattttaccatttaaatcaacataattaatcatttccttaataagcgcgcacaaaccttaaacga 29835399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 152 - 331
Target Start/End: Original strand, 43873891 - 43874070
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||||||  ||||||||||| || | | ||| |||| |||||||||| || |||||||||||||| |  ||||||||||||| |||||||   |||||||    
T  43873891 caatgcagcatttattattttttcccattataatacatttatttattaaacttcatccaacttaactactccactaactacatttaataagggtgtttta 43873990  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||  || ||||||||| ||  ||||||| |||||||||||||||| |||||| | ||||  ||| |||||||||||    
T  43873991 gtaaatgatattaattttaccatcaaaatcaacacaattaatcatttctttaataaccatgcatcaaccttaaacgacta 43874070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 153 - 331
Target Start/End: Original strand, 48608836 - 48609009
Alignment:
Q  153 aatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttag 252  Q
    |||||| |||||||||||| |||| | ||||||||  ||||||||||||||||||||||||||| |    |||||||||| ||||||||  |||||||||    
T  48608836 aatgcagtatttattattt-tttccattattatactcttatttattgaatttcatccaacttaactacatcactaactacgattaataaggatgttttag 48608934  T
Q  253 taaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||    ||||| |||||| ||  ||||||| |||||||||||||||  |||||||| |||| |||| | |||||||||    
T  48608935 taa----tactagttttaccatcaaaatcaacacaattaatcatttccttaataatcatgcataaacctcaaacgacta 48609009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 150 - 257
Target Start/End: Original strand, 25571386 - 25571492
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||| ||||||||||| ||| || ||||||||| ||||||||||||||||||||||||||| | ||||||||||||||| ||||||   | |||    
T  25571386 accaatgcaacatttattattttttt-aattattatacccttatttattgaatttcatccaacttaactattccactaactacaactaataagggtattt 25571484  T
Q  250 tagtaaat 257  Q
    ||||||||    
T  25571485 tagtaaat 25571492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 331
Target Start/End: Complemental strand, 32018865 - 32018694
Alignment:
Q  161 atttattatttgtttca-actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatac 259  Q
    ||||||||||| ||||  |||||||  || ||||||||| ||||| |||||||||||||  || |||||| |||||||||||   | |||||||||||      
T  32018865 atttattatttttttcccactattaagcccttatttattaaatttaatccaacttaattactctactaacgacaattaataagagtattttagtaaatga 32018766  T
Q  260 tactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||  |||||||||||||||||||| ||||||| |||||||  ||| |||||| |||||| |||||| |||||    
T  32018765 tagaaattttactattgaaatcaacacaattattcatttcattaaaaatcgtacaaaaattttaaatgacta 32018694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 153 - 331
Target Start/End: Original strand, 42935627 - 42935808
Alignment:
Q  153 aatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttcc---actaactacaattaataaatatgttt 249  Q
    ||||||| ||||||||||| || ||| ||| ||||  |||||||||||| |||||||||||||| |  |||   ||||||||||||||||||   |||||    
T  42935627 aatgcaacatttattattttttccaattataatactcttatttattgaacttcatccaacttaactcctcctccactaactacaattaataagggtgttt 42935726  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||  || ||||||||| ||  ||||||| ||||||||||||||   |||||| ||||||  ||| |||||||||||    
T  42935727 tagtaaatgatattaattttaccatcaaaatcaacacaattaatcattttcttaataaccgtgcatcaaccttaaacgacta 42935808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 179 - 328
Target Start/End: Original strand, 23670481 - 23670629
Alignment:
Q  179 ctattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaa 278  Q
    |||||||||  ||||||||| ||||||||| ||||||| |  |||||||||||| ||||||||   ||||||||||||| ||| ||||||||| || |||    
T  23670481 ctattatactcttatttattaaatttcatcaaacttaactactccactaactaccattaataagagtgttttagtaaatgctattaattttaccatggaa 23670580  T
Q  279 atcaatacaattaatcatttctataataatcgtgcaaaaactttaaacga 328  Q
    ||||| ||||||||| ||| |  ||||||| ||||| |||| ||||||||    
T  23670581 atcaacacaattaat-attcccttaataattgtgcacaaaccttaaacga 23670629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 180 - 271
Target Start/End: Complemental strand, 6495067 - 6494976
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttac 271  Q
    ||||||||| ||||||||| ||||||||||||||| | |  ||||||||||||||||||||||  ||||||||||||||  |||||||||||    
T  6495067 tattatacccttatttattaaatttcatccaactttactactccactaactacaattaataaaagtgttttagtaaataacactaattttac 6494976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 161 - 299
Target Start/End: Complemental strand, 32019068 - 32018929
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatact 260  Q
    ||||||||||| || | |||||||  || ||||||||| |||||||||||||||||||  ||||||||| |||||||||||   | |||||||||||  |    
T  32019068 atttattattttttcccactattaatcccttatttattaaatttcatccaacttaattactccactaacaacaattaataagagtattttagtaaatgat 32018969  T
Q  261 actaattttactatt-gaaatcaatacaattaatcatttc 299  Q
    |  ||||||||||||  ||||||| |||||||||||||||    
T  32018968 agaaattttactattcaaaatcaacacaattaatcatttc 32018929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 331
Target Start/End: Complemental strand, 32346204 - 32346034
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatact 260  Q
    ||||||||| | |||| | ||||||||| |||||||||||||||||| |||||||| |  |||||||| || |||||||||   | |||||||| ||  |    
T  32346204 atttattatctttttccattattatacccttatttattgaatttcattcaacttaactactccactaattataattaataagagtattttagtagatgat 32346105  T
Q  261 actaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    | ||||||||| ||||||||||| ||||| ||| |||||  |||||| ||| || |||| |||||| ||||    
T  32346104 attaattttaccattgaaatcaacacaatcaattatttccttaataaccgtacacaaaccttaaacaacta 32346034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 331
Target Start/End: Original strand, 13961965 - 13962106
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaat 289  Q
    ||||||||| ||||||||||||||||| |  ||||||||||||| |||||||  || ||||| ||| |  || ||||||||  ||| ||||||| |||||    
T  13961965 ttatttattaaatttcatccaacttaactactccactaactacacttaataaggatattttattaagtgatattaattttatcattaaaatcaacacaat 13962064  T
Q  290 taatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||||  |||||| |||||| |||| ||||| |||||    
T  13962065 taatcatttccttaataaacgtgcataaaccttaaatgacta 13962106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 190 - 331
Target Start/End: Complemental strand, 31930622 - 31930479
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgt--tccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaataca 287  Q
    ||||||||||||||||||| ||||||| | |  |||||||||||||||||||||   | |||||  ||||   | || |||||| ||| ||||||| |||    
T  31930622 ttatttattgaatttcatcaaacttaactatactccactaactacaattaataagggtattttaaaaaattagattagttttaccattaaaatcaacaca 31930523  T
Q  288 attaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
     | |||||||||| ||||||||||||| ||||||||||||||||    
T  31930522 gtcaatcatttctttaataatcgtgcataaactttaaacgacta 31930479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 331
Target Start/End: Complemental strand, 16560679 - 16560552
Alignment:
Q  204 tcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctata 303  Q
    ||||||||||||| |   ||||||||||||||||||||  ||||||||||||||  ||||| |||||| ||  |||| || |||||||||||||||  ||    
T  16560679 tcatccaacttaactaccccactaactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaataaacacaattaatcatttcctta 16560580  T
Q  304 ataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||||| |||  ||||| |||||    
T  16560579 ataatcgtgcataaatcttaaatgacta 16560552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 331
Target Start/End: Original strand, 16604983 - 16605110
Alignment:
Q  204 tcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctata 303  Q
    ||||||||||||| |   ||||||||||||||||||||  ||||||||||||||  ||||| |||||| ||  |||| || |||||||||||||||  ||    
T  16604983 tcatccaacttaactaccccactaactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaataaacacaattaatcatttcctta 16605082  T
Q  304 ataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||||| |||  ||||| |||||    
T  16605083 ataatcgtgcataaatcttaaatgacta 16605110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 331
Target Start/End: Complemental strand, 17828483 - 17828334
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||| | |||||||||||||| ||||||||||||||  |||||||||||||||| ||||   |  ||| ||||||  || ||||||||| |||||||    
T  17828483 tattatatcattatttattgaatt-catccaacttaattactccactaactacaattgataagagtaattttgtaaatgatattaattttaccattgaaa 17828385  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||| | || ||||| ||||  |||| |||||||| ||||||||||||||||    
T  17828384 tcaacaaaaataatcgtttccttaat-atcgtgcacaaactttaaacgacta 17828334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 298
Target Start/End: Original strand, 27920994 - 27921102
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaat 289  Q
    ||||| |||||| |||||||||||||| |  | |||||||||||||||||||   ||||||| |||||  |||||||||||| ||| ||||||| | |||    
T  27920994 ttattgattgaacttcatccaacttaactaatgcactaactacaattaataagagtgttttaataaatgatactaattttaccattaaaatcaacataat 27921093  T
Q  290 taatcattt 298  Q
    |||||||||    
T  27921094 taatcattt 27921102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 331
Target Start/End: Original strand, 44180268 - 44180352
Alignment:
Q  247 ttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||||||||  |||||||||||| ||||||||||| ||||||||||||||   ||||||||||| | |||| |||||||||||    
T  44180268 ttttagtaaattatactaattttaccattgaaatcaacacaattaatcattttcttaataatcgtgtataaaccttaaacgacta 44180352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 192 - 301
Target Start/End: Original strand, 35333051 - 35333160
Alignment:
Q  192 atttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaatta 291  Q
    |||| |||||||||||| ||||||| |  |||||||||||||||||||||  || ||||| |||||| || ||||| ||  ||||||||||| |||||||    
T  35333051 atttgttgaatttcatctaacttaactactccactaactacaattaataataatattttaataaataatattaattatataattgaaatcaacacaatta 35333150  T
Q  292 atcatttcta 301  Q
    |  |||||||    
T  35333151 actatttcta 35333160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 152 - 241
Target Start/End: Original strand, 44424113 - 44424201
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataa 241  Q
    |||||||  ||||||||||| |||||  ||| ||||| |||||||||||| ||||||||||||||||  ||||||||||||| |||||||    
T  44424113 caatgcagcatttattatttttttcat-tataatacccttatttattgaacttcatccaacttaattactccactaactacatttaataa 44424201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 258
Target Start/End: Original strand, 17610896 - 17610976
Alignment:
Q  178 actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaata 258  Q
    ||||||||| |||| | |||||||||||||||||||||| | || || ||||||||||||||| | || ||||||||||||    
T  17610896 actattatatctttgtgtattgaatttcatccaacttaactatttcaataactacaattaatacaaatattttagtaaata 17610976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 331
Target Start/End: Original strand, 46211472 - 46211578
Alignment:
Q  228 actacaattaataaatatgttttagtaaat---actactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaa 324  Q
    ||||||||||||||  ||||||||||||||   | ||||| |||||| ||  ||||||| |||||||||||||||  ||||||| ||||| |||| ||||    
T  46211472 actacaattaataaggatgttttagtaaatgatagtactagttttaccatcaaaatcaacacaattaatcatttccttaataattgtgcataaaccttaa 46211571  T
Q  325 acgacta 331  Q
    |||||||    
T  46211572 acgacta 46211578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 49101659 - 49101719
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaata 240  Q
    |||||||| ||||||||||||||||||| |||||||| |  ||||||||||||||||||||    
T  49101659 tattatacttttatttattgaatttcattcaacttaactactccactaactacaattaata 49101719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 331
Target Start/End: Complemental strand, 2850947 - 2850863
Alignment:
Q  247 ttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||||||||| || ||||||||  ||||||||||| | |||||||||||||  |||||||| |||| ||||  ||||||||||    
T  2850947 ttttagtaaataatattaattttatcattgaaatcaacataattaatcatttccttaataatcatgcacaaaccataaacgacta 2850863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 331
Target Start/End: Complemental strand, 19060529 - 19060383
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||| | |||||| ||||||||||||||| || |    | ||||||||||||||||||| |||     | |||||| || ||||||||| ||| |||    
T  19060529 tattatatccttatttgttgaatttcatccaagttgacaaattcactaactacaattaataagtat-----aataaataatattaattttacaatttaaa 19060435  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||| |||||||||||||||| | | |||  | || ||||||||||||||||    
T  19060434 tcaacacaattaatcatttctttcaaaattatacacaaactttaaacgacta 19060383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 36790720 - 36790797
Alignment:
Q  163 ttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataa 241  Q
    ||||||||| |||| | ||||||||| |||||||||||||||||||| || ||| |  || ||||||||||||||||||    
T  36790720 ttattattt-tttccattattatacccttatttattgaatttcatccgacataactactcaactaactacaattaataa 36790797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 306
Target Start/End: Complemental strand, 17783183 - 17783098
Alignment:
Q  221 tccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataata 306  Q
    ||||||||||| |||||||||| ||||||||||||| |  ||  ||||||||||| | ||||| || ||||||||| ||| |||||    
T  17783183 tccactaactataattaataaagatgttttagtaaacaacacatattttactattaagatcaaaactattaatcatctctttaata 17783098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 30546485 - 30546413
Alignment:
Q  183 tatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaa 255  Q
    |||||| |||||||||||||||||  | |||||| |  |||| |||||||||||||||||  |||||||||||    
T  30546485 tatacccttatttattgaatttcactccacttaactactccaataactacaattaataaaggtgttttagtaa 30546413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 29835618 - 29835567
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaa 201  Q
    |||||||||| |||||||||||  ||| ||||||||| ||||||||||||||    
T  29835618 accaatgcaacatttattattttgttccactattatatctttatttattgaa 29835567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 108
Target Start/End: Original strand, 33819113 - 33819143
Alignment:
Q  78 cgtctcacaattattgtctctttaacatttt 108  Q
    |||||||||||||||||||||||||||||||    
T  33819113 cgtctcacaattattgtctctttaacatttt 33819143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 45725036 - 45724978
Alignment:
Q  184 atacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaa 242  Q
    |||| ||||| |||| ||||||||||||||| ||| |||||| ||||| ||||||||||    
T  45725036 atacatttatatattaaatttcatccaacttgattattccaccaactaaaattaataaa 45724978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 271
Target Start/End: Original strand, 24166938 - 24167078
Alignment:
Q  127 taattgtcactttacaatgcaacaccaatgcaatatttattatttgt-ttcaactattatacctttatttattgaatttcatccaacttaattgttccac 225  Q
    ||||||||||||||||||     |||||||||||||||||||||| | ||  ||| |||| || |||||| ||||||||||| |||  ||| |  | |||    
T  24166938 taattgtcactttacaat-----accaatgcaatatttattatttttatttcacttttattcccttatttcttgaatttcattcaatgtaactactgcac 24167032  T
Q  226 taactacaattaataaatatgttttagtaaatactactaattttac 271  Q
    ||||||| ||||||||   | ||||||||||||  | |||||||||    
T  24167033 taactactattaataagggtattttagtaaataacattaattttac 24167078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 298
Target Start/End: Complemental strand, 31665840 - 31665731
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaat-actactaattttactattgaaatcaatacaa 288  Q
    |||||||||||| || ||| || |||| |  || ||||||||| |||||||||||| ||||||||||| |  | ||||||||| ||| ||||||| ||||    
T  31665840 ttatttattgaaatttatctaatttaactactctactaactactattaataaatatattttagtaaatgaaaattaattttaccattaaaatcaacacaa 31665741  T
Q  289 ttaatcattt 298  Q
     |||| ||||    
T  31665740 ctaattattt 31665731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 37490341 - 37490422
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaacta 231  Q
    |||||||||| ||||||||||  |||  |||| ||| |  |||||||||||||||||| ||| ||||||  |||||||||||    
T  37490341 accaatgcaacatttattattattttttactagtatgctcttatttattgaatttcattcaatttaattactccactaacta 37490422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 238
Target Start/End: Complemental strand, 47045611 - 47045546
Alignment:
Q  173 tttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaa 238  Q
    |||| ||||||||||  |||||| |||||||||||||||||||| |  | ||||||| ||||||||    
T  47045611 tttccactattatactcttatttgttgaatttcatccaacttaactactacactaaccacaattaa 47045546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 44424214 - 44424282
Alignment:
Q  263 taattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||| ||  ||||||| |||||||||||||||  |||||| ||||||  ||| |||||||||||    
T  44424214 taattttaccatcaaaatcaacacaattaatcatttccttaataaccgtgcatcaaccttaaacgacta 44424282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 7e-46; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 21216275 - 21216078
Alignment:
Q  127 taattgtcactttacaatgcaacaccaatgcaatatttatt-atttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccac 225  Q
    ||||||||||||||||||     |||||||||| ||||||| |||| |||| ||||||||||| ||  ||||||||||||||||||||||| |  |||||    
T  21216275 taattgtcactttacaat-----accaatgcaacatttatttatttttttctactattataccatt--ttattgaatttcatccaacttaactactccac 21216183  T
Q  226 taactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaa 325  Q
    ||||||||||||||||  |||||||||||||| | ||||||||||| ||||||||||| |||||||||||||||  |||||||| |||| |||| |||||    
T  21216182 taactacaattaataaggatgttttagtaaatgcaactaattttaccattgaaatcaacacaattaatcatttccttaataatcatgcacaaaccttaaa 21216083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 161 - 308
Target Start/End: Original strand, 7172884 - 7173031
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatact 260  Q
    ||||||||||| |||| ||||||||||| |||||||||||||||||| |||||||| |  | || |||||||||||||||||||||||||||||||| ||    
T  7172884 atttattatttttttccactattatacccttatttattgaatttcattcaacttaactacttcattaactacaattaataaatatgttttagtaaatgct 7172983  T
Q  261 actaattttactattgaaatcaatacaattaatcatttctataataat 308  Q
    ||||||||||  ||||||||||| |||||||||||||||| |||||||    
T  7172984 actaattttatcattgaaatcaacacaattaatcatttctttaataat 7173031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 150 - 331
Target Start/End: Complemental strand, 17719415 - 17719234
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||| ||||||||| | |||| | ||||||||||||||||||| ||||||||||||||||| |  ||||||||||| |||||||||  || |||    
T  17719415 accaatgcaacatttattatctttttccattattatacctttatttattaaatttcatccaacttaactactccactaactataattaataaggatattt 17719316  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||| |||||| ||||| ||| |||||| ||||||||||||||| | ||||||||||||| |||  |||||||||||    
T  17719315 tagtaaataatactaactttaccattaaaatcattacaattaatcatttttttaataatcgtgcacaaatcttaaacgacta 17719234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 161 - 332
Target Start/End: Complemental strand, 11977082 - 11976911
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatact 260  Q
    ||||||||||| ||||  |||||||||||||||||||||||||||||| ||||||| |  || ||||||||||||||||||   | ||||||||||| ||    
T  11977082 atttattatttttttccgctattatacctttatttattgaatttcatctaacttaactactctactaactacaattaataagggtattttagtaaatgct 11976983  T
Q  261 actaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    ||| ||| ||| ||||||||||| ||||||||| ||||| ||||||||| |||| |||| ||||||||||||    
T  11976982 actgattataccattgaaatcaacacaattaatgatttccataataatcatgcacaaaccttaaacgactaa 11976911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 150 - 308
Target Start/End: Complemental strand, 34948842 - 34948686
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||||||||||||||| |||||  | ||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||||| |||||    
T  34948842 accaatgcaatatttattatttttttcat-tgttatacctt-atttattgaatttcatccaacttaactactccactaactacaattaataaatgtgttt 34948745  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataat 308  Q
      ||||||  |||||||||||||||| ||||||| |||||||||||||||  |||||||    
T  34948744 ctgtaaatgatactaattttactatttaaatcaacacaattaatcatttccttaataat 34948686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 150 - 331
Target Start/End: Complemental strand, 10180104 - 10179923
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||| ||||||||||  |||| | ||||||||  ||||| |||||||||||| |||||||| |  ||||||||||||||||||||| | | |||    
T  10180104 accaatgcaacatttattattattttctattattatacacttattaattgaatttcattcaacttaactactccactaactacaattaataagtgtattt 10180005  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||  |||||||||||| |||||||||||||||| || ||||||   ||||||||||||| |||| |||||||||||    
T  10180004 tagtaaattatactaattttaccattgaaatcaatacaactactcattttcttaataatcgtgcacaaaccttaaacgacta 10179923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 122 - 332
Target Start/End: Original strand, 39482548 - 39482756
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatatttattatttgtttcaactattat---acctttatttattgaatttcatccaacttaatt 218  Q
    |||| ||||||||||||||||||     ||||||||| |||||||||||| || | ||||||||   ||| |||||||||||||||||| | |||||| |    
T  39482548 caaaataattgtcactttacaat-----accaatgcagtatttattattttttcccactattattatacccttatttattgaatttcattccacttaact 39482642  T
Q  219 gttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaa 318  Q
      ||||||||||| |||||||||   ||||||||||||| |||||||||||||  |||||||||| ||||||||||||||   ||||||||||||| |||    
T  39482643 agtccactaactataattaataagggtgttttagtaaattctactaattttacccttgaaatcaacacaattaatcattttcttaataatcgtgcacaaa 39482742  T
Q  319 ctttaaacgactaa 332  Q
      ||||||||||||    
T  39482743 tcttaaacgactaa 39482756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 164 - 299
Target Start/End: Complemental strand, 44761637 - 44761502
Alignment:
Q  164 tattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactact 263  Q
    ||||| || |||| ||||||||||| | ||||||||||||||||||||||||| |  |||||||||||||||||||||   ||||||||||||| |||||    
T  44761637 tattagttttttccactattataccctcatttattgaatttcatccaacttaactactccactaactacaattaataagggtgttttagtaaatgctact 44761538  T
Q  264 aattttactattgaaatcaatacaattaatcatttc 299  Q
    |||||||| ||||||||||| |||||||||||||||    
T  44761537 aattttaccattgaaatcaacacaattaatcatttc 44761502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 122 - 332
Target Start/End: Complemental strand, 45425847 - 45425641
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatatttattatttgttt-caactattatacctttatttattgaatttcatccaacttaattgt 220  Q
    |||| ||||||||||||||||||     | ||||| || ||||||||||| ||| | ||||||||||| |||||||||||||||||| ||||||||||      
T  45425847 caaaataattgtcactttacaat-----atcaatgtaacatttattattttttttccactattatacccttatttattgaatttcatacaacttaattac 45425753  T
Q  221 tccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaact 320  Q
    |||||||||||||||||||||  |||||||| |||||  || ||||||||| ||| ||||||| ||||||||||||||   |||||||| |||| |||      
T  45425752 tccactaactacaattaataagaatgttttaataaatgttattaattttaccattaaaatcaacacaattaatcattttcttaataatcatgcataaaac 45425653  T
Q  321 ttaaacgactaa 332  Q
    ||||||||||||    
T  45425652 ttaaacgactaa 45425641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 152 - 332
Target Start/End: Original strand, 39405723 - 39405903
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||||||  ||||||||||  |||  ||||||||||| ||||||||| |||||||| ||||||||||  ||||||||||  |||||||||| || || ||    
T  39405723 caatgcagcatttattattatttttcactattatacccttatttatttaatttcattcaacttaattactccactaactgtaattaataaagatattata 39405822  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    ||||||  |||||||||||  |||||||| || |||||||||||||||  ||||||||||||| |||| ||||||||||||    
T  39405823 gtaaatgatactaattttatcattgaaattaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgactaa 39405903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 150 - 328
Target Start/End: Original strand, 13335176 - 13335353
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||| ||||||||||| |||| | ||||||||| | ||||||||||||||||| ||||||| |  || ||||||| |||||||||||| |||||    
T  13335176 accaatgcaacatttattattt-tttccattattataccctgatttattgaatttcatcaaacttaactactctactaactgcaattaataaatgtgttt 13335274  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacga 328  Q
    || |||||  |||||||||||| ||  ||||||| |||||||| ||||||  ||||||||||||| |||| ||||||||    
T  13335275 tactaaatgatactaattttaccatcaaaatcaacacaattaaccatttccttaataatcgtgcataaaccttaaacga 13335353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 180 - 332
Target Start/End: Original strand, 31082608 - 31082760
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||||||||||||| ||||||||||||||||| |  ||||||||||| |||||||||   ||||||||||||||| ||||||||||  ||| |||    
T  31082608 tattatacctttatttattaaatttcatccaacttaactactccactaactataattaataagggtgttttagtaaataccactaattttatcattaaaa 31082707  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    |||| |||||||||||||||  |||| |||||||| ||||  ||||| |||||    
T  31082708 tcaagacaattaatcatttccttaattatcgtgcacaaaccataaacaactaa 31082760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 122 - 326
Target Start/End: Complemental strand, 9300295 - 9300094
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatatttattatttgtttca--actattatacctttatttattgaatttcatccaacttaattg 219  Q
    |||| ||||||||||||||||||     ||||||||| |||||||||||| ||||   ||||||||| | |||||||||||||||||| |||||||| |     
T  9300295 caaaataattgtcactttacaat-----accaatgcagtatttattatttctttccccactattatatccttatttattgaatttcattcaacttaacta 9300201  T
Q  220 ttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaac 319  Q
     ||||||||||| |||||||||   ||||||||||||| ||| ||||||||| ||| ||||||| ||||  ||||||||   ||||||||||||| ||||    
T  9300200 ctccactaactaaaattaataagggtgttttagtaaatgctattaattttaccattaaaatcaacacaaacaatcattttcttaataatcgtgcataaac 9300101  T
Q  320 tttaaac 326  Q
     ||||||    
T  9300100 cttaaac 9300094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 223 - 332
Target Start/End: Complemental strand, 1875676 - 1875567
Alignment:
Q  223 cactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaacttt 322  Q
    |||||||||||||||||||   ||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||  ||||||||||||| |||| ||    
T  1875676 cactaactacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcacaaacctt 1875577  T
Q  323 aaacgactaa 332  Q
    ||||||||||    
T  1875576 aaacgactaa 1875567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 183 - 324
Target Start/End: Complemental strand, 27294183 - 27294042
Alignment:
Q  183 tatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatca 282  Q
    ||||| ||||||||||||||||||||||||||||||  |||||||||| |||||||||||||| ||||||||||   |||||||||||  ||| |||| |    
T  27294183 tatacatttatttattgaatttcatccaacttaattactccactaactgcaattaataaatatattttagtaaaagatactaattttatcattcaaatga 27294084  T
Q  283 atacaattaatcatttctataataatcgtgcaaaaactttaa 324  Q
    | ||||||||| | |||| ||| ||||||||| |||| ||||    
T  27294083 acacaattaataacttctttaaaaatcgtgcacaaaccttaa 27294042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 161 - 331
Target Start/End: Complemental strand, 43719382 - 43719211
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaat-ac 259  Q
    ||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||   | ||||| ||||| ||    
T  43719382 atttactattttattcaactattatacctttatttattgaatttcatccaacttaattattcaactaactataattaataatgttattttaataaatgac 43719283  T
Q  260 tactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
      |||||||||  ||| ||||||||| ||||||| |||| | ||| || | |||| || |||||||||||||    
T  43719282 acctaattttataattaaaatcaatataattaataatttatttaaaaaccatgcataatctttaaacgacta 43719211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 152 - 331
Target Start/End: Complemental strand, 26626267 - 26626088
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||||||  ||||||||||| || | | ||||||||| |||||||||||||||||| ||||   | |  |||||||||||||||||||||  || |||||    
T  26626267 caatgcagcatttattattttttcccattattatacccttatttattgaatttcattcaaccggactactccactaactacaattaataaggatatttta 26626168  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
     |||||  ||| |||||||| ||  || |||| |||||||||||||||  ||||||||||||| |||| |||||||||||    
T  26626167 ataaattatacaaattttaccatcaaattcaacacaattaatcatttccttaataatcgtgcataaaccttaaacgacta 26626088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 153 - 331
Target Start/End: Original strand, 31270985 - 31271161
Alignment:
Q  153 aatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttag 252  Q
    ||||||||||||||||||| |||  | || |||||| ||||||||||||||| ||||||||||| |  ||||||||||| |||||||||   | ||||||    
T  31270985 aatgcaatatttattattttttt--attactatacccttatttattgaattttatccaacttaactactccactaactataattaataagagtattttag 31271082  T
Q  253 taaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    || ||  || ||||||||| ||| ||||||| ||||| ||||||||   |||||||||| || |||| |||||||||||    
T  31271083 tatatgatattaattttaccattaaaatcaacacaatcaatcattttcttaataatcgtacacaaaccttaaacgacta 31271161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 150 - 328
Target Start/End: Complemental strand, 22771992 - 22771814
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||| ||||||||||  |||  | ||||||||| ||||||||||||||||||||||| |||||  | |||||||||||||||||||   |||||    
T  22771992 accaatgcaacatttattattacttttcattattatacccttatttattgaatttcatccaacataattacttcactaactacaattaataagggtgttt 22771893  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacga 328  Q
    || |||||   ||||||||||| ||  |||||||  |||||||||| |||  ||||||  ||||| |||| ||||||||    
T  22771892 taataaatgacactaattttaccatcaaaatcaacccaattaatcaattccttaataactgtgcataaaccttaaacga 22771814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 181 - 295
Target Start/End: Original strand, 42886990 - 42887104
Alignment:
Q  181 attatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaat 280  Q
    |||||||  ||||||||||||||| ||||||||||| |   |||||||||||||||||||||  | |||||||||||  |||||||||| ||||||||||    
T  42886990 attatactcttatttattgaattttatccaacttaactacgccactaactacaattaataaaggtattttagtaaatgatactaattttgctattgaaat 42887089  T
Q  281 caatacaattaatca 295  Q
    ||| |||||||||||    
T  42887090 caacacaattaatca 42887104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 202 - 299
Target Start/End: Original strand, 31331419 - 31331516
Alignment:
Q  202 tttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttc 299  Q
    |||||||||||||||||  | |||||||||||||||||||  || |||||||||||| || ||||||||  |||||||||||||||||||||||||||    
T  31331419 tttcatccaacttaattacttcactaactacaattaataatgatattttagtaaataataataattttataattgaaatcaatacaattaatcatttc 31331516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 188 - 331
Target Start/End: Complemental strand, 10098110 - 10097967
Alignment:
Q  188 ctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaataca 287  Q
    |||||||||||||| |||||||||||||| |  |||||||||||||||||||||   |||| ||||||||  || ||||||||| ||  |||||||||||    
T  10098110 ctttatttattgaacttcatccaacttaactactccactaactacaattaataagggtgttatagtaaatgatattaattttaccatcaaaatcaataca 10098011  T
Q  288 attaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||||||||   |||||| | ||||  ||| |||||||||||    
T  10098010 attaatcattttcttaataaccatgcatcaaccttaaacgacta 10097967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 328
Target Start/End: Complemental strand, 40996482 - 40996344
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaat 289  Q
    |||||||||||||||||||||||||||   || |||||||||||||||||||   |||||||||||||   |||||||||||  |  ||||||| |||||    
T  40996482 ttatttattgaatttcatccaacttaaccatttcactaactacaattaataagggtgttttagtaaatgaaactaattttacattcaaaatcaacacaat 40996383  T
Q  290 taatcatttctataataatcgtgcaaaaactttaaacga 328  Q
    ||||||||||  ||| ||| ||||| |||| ||||||||    
T  40996382 taatcatttccttaacaattgtgcataaaccttaaacga 40996344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 210 - 331
Target Start/End: Original strand, 51132 - 51252
Alignment:
Q  210 aacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatc 309  Q
    |||||||||  ||||||||||||||||||||||| |||||| ||||||  |||| ||||||| ||| ||||||| ||||||||||||||   ||||||||    
T  51132 aacttaattaatccactaactacaattaataaatgtgtttttgtaaatgatacttattttac-attaaaatcaacacaattaatcattttcttaataatc 51230  T
Q  310 gtgcaaaaactttaaacgacta 331  Q
    ||||| |||| |||||| ||||    
T  51231 gtgcacaaaccttaaacaacta 51252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 173 - 298
Target Start/End: Complemental strand, 4428485 - 4428360
Alignment:
Q  173 tttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttact 272  Q
    |||| |||||||||| |||||||||||||||||||| ||||||| |  | ||||||||||||||||||| | | |||||||||||  || ||||||||      
T  4428485 tttccactattatacttttatttattgaatttcatctaacttaactaattcactaactacaattaataattgtattttagtaaatgataataattttatc 4428386  T
Q  273 attgaaatcaatacaattaatcattt 298  Q
    ||| ||||||| |||| |||||||||    
T  4428385 attaaaatcaacacaaataatcattt 4428360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 298
Target Start/End: Complemental strand, 14855090 - 14854943
Alignment:
Q  153 aatgcaatatttattatttgttt--caactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttt 250  Q
    ||||||||||||||||||| |||  | ||||||||||| || ||||||||||||||| || | ||| |  ||||||||||||||||||||||  ||||||    
T  14855090 aatgcaatatttattatttttttttccactattataccattctttattgaatttcattcagcctaactactccactaactacaattaataaaggtgtttt 14854991  T
Q  251 agtaaatactactaattttactattgaaatcaatacaattaatcattt 298  Q
    || |||| | | ||||||||| ||| ||||||| ||||| | ||||||    
T  14854990 agcaaatgcaattaattttaccattaaaatcaacacaatgattcattt 14854943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 150 - 314
Target Start/End: Original strand, 31231689 - 31231853
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||  ||||||||||| |||| | ||| ||||| |||||||||||| || ||||||||||| |  |||||||||||||||||||||   |||||    
T  31231689 accaatgcatcatttattatttttttccattataatacccttatttattgaactttatccaacttaactactccactaactacaattaataagggtgttt 31231788  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgca 314  Q
     |||||||  || ||||||||| ||  ||||| | |||||| ||||||||  |||||| ||||||    
T  31231789 cagtaaatgatattaattttaccatcaaaatcgacacaattcatcatttccttaataaccgtgca 31231853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 331
Target Start/End: Complemental strand, 34394075 - 34393930
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgttccac----taactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaata 285  Q
    |||||||||||| || ||||||||||| |  |||||    |||||| ||||||||||  |||||||||||||  |||||||||||| ||  ||||||| |    
T  34394075 ttatttattgaactttatccaacttaactactccactagttaactataattaataaaggtgttttagtaaattatactaattttaccatcaaaatcaaca 34393976  T
Q  286 caattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||||||||||||  |||||| ||||||  |||||||||||||||    
T  34393975 caattaatcatttccttaataaccgtgcatcaactttaaacgacta 34393930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 194 - 298
Target Start/End: Complemental strand, 34057731 - 34057627
Alignment:
Q  194 ttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaat 293  Q
    ||||||||||||||||||||||| | || |||||||||||| ||| ||  || |||||||||||| ||||| ||||| |||||||||||| | |||||||    
T  34057731 ttattgaatttcatccaacttaactatttcactaactacaaataacaacgatattttagtaaataatactagttttattattgaaatcaacataattaat 34057632  T
Q  294 cattt 298  Q
     ||||    
T  34057631 tattt 34057627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 299
Target Start/End: Complemental strand, 5053280 - 5053161
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||  ||||||||||||| |||||||| |||| |  ||| |||||||||||||||||   |||||||||||||  || ||||||||| ||  |||    
T  5053280 tattatactcttatttattgaatctcatccaatttaactactccgctaactacaattaataagactgttttagtaaatgatattaattttaccatcaaaa 5053181  T
Q  280 tcaatacaattaatcatttc 299  Q
    |||| |||||||||||||||    
T  5053180 tcaacacaattaatcatttc 5053161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 150 - 299
Target Start/End: Complemental strand, 396768 - 396619
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||| ||||||||||  |||  | ||||||||| ||||| ||||||||| ||||||  ||| |  | || ||||||||||||||||  || ||     
T  396768 accaatgcaacatttattattatttttcattattatacccttattaattgaattttatccaatataactacttcattaactacaattaataaggatattg 396669  T
Q  250 tagtaaatactactaattttactattgaaatcaatacaattaatcatttc 299  Q
    ||||||||  ||||||||||||  |||||||||| | |||||||||||||    
T  396668 tagtaaatgatactaattttaccgttgaaatcaacataattaatcatttc 396619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 292
Target Start/End: Original strand, 17823883 - 17824022
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||| |||||||||||||||  | || |||||||||  ||||||||| ||||||||||||||||| |  | ||||||||||||||||||||  | || ||    
T  17823883 caatacaatatttattatttcctcca-ctattatactattatttatttaatttcatccaacttaactacttcactaactacaattaataaaggtattcta 17823981  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaa 292  Q
    |||||   |||||||||||  ||||||||||| || |||||    
T  17823982 gtaaaagatactaattttatcattgaaatcaacacgattaa 17824022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 330
Target Start/End: Original strand, 32476278 - 32476426
Alignment:
Q  182 ttatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatc 281  Q
    ||||||| ||||||||||||||||||| ||||||| |  | || ||||||||||||||||   | ||||| |||||  || ||||||||  |||||||||    
T  32476278 ttatacccttatttattgaatttcatcaaacttaactacttcattaactacaattaataagggtattttaataaatgatattaattttatcattgaaatc 32476377  T
Q  282 aatacaattaatcatttctataataatcgtgcaaaaactttaaacgact 330  Q
    || | ||| ||||||||   |||||| |||||| |||| ||||||||||    
T  32476378 aacagaatcaatcattttcttaataaccgtgcacaaaccttaaacgact 32476426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 298
Target Start/End: Original strand, 40028482 - 40028623
Alignment:
Q  161 atttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaac----tacaattaataaatatgttttagtaaa 256  Q
    ||||||||||| |||| | |||||||   || |||||||||||||||| |||||||||  | |||||||    ||||||||||||  || ||||| ||||    
T  40028482 atttattatttttttccagtattatattcttgtttattgaatttcatctaacttaattacttcactaactaaatacaattaataatgatattttaataaa 40028581  T
Q  257 tactactaattttactattgaaatcaatacaattaatcattt 298  Q
    | ||| ||||||||| ||||||||||| | ||||||||||||    
T  40028582 tgctattaattttaccattgaaatcaacataattaatcattt 40028623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 314
Target Start/End: Original strand, 40109789 - 40109857
Alignment:
Q  246 gttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgca 314  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||||||||||||| ||| || ||||||    
T  40109789 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttaaaaaccgtgca 40109857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 325
Target Start/End: Complemental strand, 42972625 - 42972490
Alignment:
Q  193 tttattgaatttcatccaacttaatt--gt-tccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaat 289  Q
    ||||||||||||||| |||||||| |  || ||||||||||| |||||||||   | ||||||||||   || ||||||||| ||||||||||| |||||    
T  42972625 tttattgaatttcattcaacttaactacgtctccactaactataattaataagggtattttagtaaacgatattaattttaccattgaaatcaaaacaat 42972526  T
Q  290 taatcatttctataataatcgtgcaaaaactttaaa 325  Q
    |||||||||   ||||||||||||| |||| |||||    
T  42972525 taatcattttcttaataatcgtgcacaaaccttaaa 42972490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 4924225 - 4924094
Alignment:
Q  150 accaatgcaatatttattatt-tgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtt 248  Q
    |||||| || ||||||||||| | |||  |||| |||||| ||||||||| | |||||| |||||||| |  || | ||||||||||||||||| || ||    
T  4924225 accaatacattatttattattattttttcactaatatacccttatttattaagtttcattcaacttaactactctattaactacaattaataaagatatt 4924126  T
Q  249 ttagtaaatactactaattttactattgaaat 280  Q
    |||||||||| |||||||||||| ||| ||||    
T  4924125 ttagtaaataatactaattttaccattaaaat 4924094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 190 - 257
Target Start/End: Original strand, 32678402 - 32678469
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaat 257  Q
    ||||||||| ||||||||||||||||| |  |||||||||||||||||||||  ||||||||||||||    
T  32678402 ttatttatttaatttcatccaacttaactactccactaactacaattaataaggatgttttagtaaat 32678469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 299
Target Start/End: Original strand, 5356602 - 5356707
Alignment:
Q  193 tttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaa 292  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||  |   |||||||||  || ||||||||  ||| ||||||| |||| |||    
T  5356602 tttattgaatttcatccaacttaattattccattaactacaattaataaa-gtacattagtaaatgatattaattttatcattaaaatcaacacaactaa 5356700  T
Q  293 tcatttc 299  Q
    |||||||    
T  5356701 tcatttc 5356707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 331
Target Start/End: Original strand, 36967415 - 36967501
Alignment:
Q  245 tgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||||||||||  || ||||||||| ||  ||||||| |||||||||||||||  ||||||||||||| |||| |||||||||||    
T  36967415 tgttttagtaaatgatattaattttaccatcaaaatcaacacaattaatcatttccttaataatcgtgcataaaccttaaacgacta 36967501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 158 - 331
Target Start/End: Complemental strand, 35505019 - 35504848
Alignment:
Q  158 aatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaat 257  Q
    |||||||||||||| ||||| |||||||||  ||||||||||||||| ||| || |||| | ||| | ||||||||||||||||| || ||||| | |||    
T  35505019 aatatttattatttttttca-ctattatactcttatttattgaattttatcgaatttaactattctattaactacaattaataaaaatattttaat-aat 35504922  T
Q  258 actactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
       |  |||||||  ||| |||| ||||||||||||||||||| ||| | |||| || | | ||||||||||||    
T  35504921 gaaataaattttaacattaaaattaatacaattaatcatttctttaaaagtcgtccatacattttaaacgacta 35504848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 178 - 311
Target Start/End: Original strand, 41091982 - 41092114
Alignment:
Q  178 actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattga 277  Q
    ||||||||||| |||||||||||||| |||  ||||||| | ||   |||||||||||||||||   | ||||| |||||  || ||||||||| |||||    
T  41091982 actattatacccttatttattgaattacata-aacttaaatatttttctaactacaattaataagagtattttaataaatgatattaattttaccattga 41092080  T
Q  278 aatcaatacaattaatcatttctataataatcgt 311  Q
    |||||| |||||||||| ||||| ||| ||||||    
T  41092081 aatcaacacaattaatcgtttctttaaaaatcgt 41092114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 331
Target Start/End: Complemental strand, 7703216 - 7703132
Alignment:
Q  247 ttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||||||||  || ||||||||| ||||||||||| ||||||||| |||||  |||||||| | || ||||||||||||||||    
T  7703216 ttttagtaaatgatattaattttaccattgaaatcaacacaattaattatttccttaataatcttacacaaactttaaacgacta 7703132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 293
Target Start/End: Complemental strand, 36007004 - 36006901
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaat 289  Q
    ||||||||||||||||||| |||||||||   |||||||||||||||||||   || ||||||| |||| || ||||||||  ||| ||||||| ||||     
T  36007004 ttatttattgaatttcatcaaacttaattaccccactaactacaattaatagggatattttagtcaataatattaattttatcattaaaatcaacacaac 36006905  T
Q  290 taat 293  Q
    ||||    
T  36006904 taat 36006901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 258
Target Start/End: Complemental strand, 29226655 - 29226577
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaata 258  Q
    |||| |||| ||||||||||||||||||| ||||||| |  |||||||||||||||||||||   ||||||| ||||||    
T  29226655 tattgtacccttatttattgaatttcatctaacttaactactccactaactacaattaataagagtgttttaataaata 29226577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 44648618 - 44648556
Alignment:
Q  221 tccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaa 283  Q
    |||||||| |||||||| ||| |||||||||||||||  |||||||||||| |||||||||||    
T  44648618 tccactaattacaattagtaagtatgttttagtaaatgatactaattttaccattgaaatcaa 44648556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 2767377 - 2767284
Alignment:
Q  221 tccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgca 314  Q
    |||||||||||||| ||||||  |||||||| |||||  |||||||||||| ||  ||||||| ||||||||| |||||  |||||| ||||||    
T  2767377 tccactaactacaaataataaggatgttttaataaatgatactaattttaccatcaaaatcaacacaattaattatttccttaataaccgtgca 2767284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 310
Target Start/End: Original strand, 39890663 - 39890740
Alignment:
Q  233 aattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcg 310  Q
    |||||||||  |||||||||||||| |||||||||||| ||||||| ||||  ||| ||||||||||| ||| |||||    
T  39890663 aattaataagaatgttttagtaaatgctactaattttattattgaagtcaactcaactaatcatttctttaaaaatcg 39890740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 260 - 332
Target Start/End: Original strand, 1739709 - 1739781
Alignment:
Q  260 tactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    |||||||||||| ||||||||||| ||||||||| |||||  |||||||||| || |||| ||| ||||||||    
T  1739709 tactaattttaccattgaaatcaacacaattaattatttccttaataatcgtacacaaaccttagacgactaa 1739781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 331
Target Start/End: Complemental strand, 39301001 - 39300917
Alignment:
Q  247 ttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||||||||  || ||||||||| || |||||||| | |||||||||||||| |||||||||| || |||  |||||||||||    
T  39301001 ttttagtaaatgatattaattttaccatcgaaatcaacataattaatcatttctttaataatcgtacacaaatcttaaacgacta 39300917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 12559635 - 12559702
Alignment:
Q  233 aattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttct 300  Q
    |||||||||| || |||||||||||  || |||||||| |||| ||||||| ||||||||||||||||    
T  12559635 aattaataaaaatattttagtaaatggtattaattttattattaaaatcaacacaattaatcatttct 12559702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 331
Target Start/End: Original strand, 32678787 - 32678858
Alignment:
Q  260 tactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    ||||| |||||| ||  ||||||| |||||||||||||||  ||||||||||| | ||||||||||||||||    
T  32678787 tactagttttaccatcaaaatcaacacaattaatcatttccttaataatcgtgtataaactttaaacgacta 32678858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 325
Target Start/End: Original strand, 33765663 - 33765794
Alignment:
Q  194 ttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaat 293  Q
    ||||||||||||| |||| |||  || | ||| ||||||||||||||||  | | |||||||||  || |||||||| |||| ||||||| | |||||||    
T  33765663 ttattgaatttcacccaatttatctgattcaccaactacaattaataaaagtatattagtaaatgatagtaattttagtattaaaatcaacataattaat 33765762  T
Q  294 catttctataataatcgtgcaaaaactttaaa 325  Q
    ||||||  ||| ||| ||||| |||| |||||    
T  33765763 catttccttaaaaattgtgcacaaaccttaaa 33765794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 39301101 - 39301022
Alignment:
Q  162 tttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataa 241  Q
    |||||||||  |||| | |||||||| ||||||||||||||||||| ||||| || |  | |||||||||||||||||||    
T  39301101 tttattattattttccattattatacttttatttattgaatttcattcaactgaactacttcactaactacaattaataa 39301022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 299
Target Start/End: Complemental strand, 5879139 - 5878997
Alignment:
Q  158 aatatttattatttgtttcaactattatacctttatttattgaatttcatccaact-taattgttccactaactacaattaataaatatgttttagtaaa 256  Q
    ||||||||||| || |||| ||||  ||||  |||||||||| ||||||  || || ||||| |||||||||| | ||||||||||| ||||||||| ||    
T  5879139 aatatttattacttttttcgactaaaatactcttatttattgcatttcaatcatctataattattccactaaccataattaataaatgtgttttagtgaa 5879040  T
Q  257 tactactaattttactattgaaatcaatacaattaatcatttc 299  Q
    |  |||  ||||||| ||| ||||||| |  ||||||||||||    
T  5879039 tgatacatattttaccattaaaatcaacaatattaatcatttc 5878997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 241
Target Start/End: Original strand, 32631376 - 32631464
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataa 241  Q
    ||||||||||| |||||||| |||| ||||||| ||  ||||| ||| |||||||  ||||||||||  ||||||||| |||||||||||    
T  32631376 caatgcaatatctattattt-tttctactattacacacttattcattaaatttcacacaacttaattactccactaacaacaattaataa 32631464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 207
Target Start/End: Complemental strand, 1875914 - 1875839
Alignment:
Q  127 taattgtcactttacaatgcaacaccaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcat 207  Q
    ||||||||||||||||||     |||||||||| |||||||| || |||| |||| |||||| ||||||||| ||||||||    
T  1875914 taattgtcactttacaat-----accaatgcaacatttattacttttttccactagtatacccttatttattaaatttcat 1875839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 312
Target Start/End: Original strand, 6611762 - 6611818
Alignment:
Q  256 atactactaattttactattgaaatcaatacaattaatcatttctataataatcgtg 312  Q
    |||| ||||||||||| ||||||||||| | |||||||||||| | |||||||||||    
T  6611762 ataccactaattttaccattgaaatcaacataattaatcatttttttaataatcgtg 6611818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 299
Target Start/End: Complemental strand, 9839909 - 9839834
Alignment:
Q  224 actaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttc 299  Q
    |||||||| ||||||| ||| | ||||| |||||| |||||||||||   |||||||||| ||| |||||||||||    
T  9839909 actaactataattaatgaatgtattttaataaataatactaattttatcgttgaaatcaaaacatttaatcatttc 9839834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 152 - 332
Target Start/End: Original strand, 50165 - 50345
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtttta 251  Q
    |||||||  ||||||||||  |||  ||||||||||| ||||||||| |||||||| ||||||||||  ||||||||||  |||||||||| || || ||    
T  50165 caatgcagcatttattattatttttcactattatacccttatttatttaatttcattcaacttaattactccactaactgtaattaataaagatattata 50264  T
Q  252 gtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    ||||||  |||||||||||  |||||||| || |||||||||||||||  ||||||||||||| |||| ||||||||||||    
T  50265 gtaaatgatactaattttatcattgaaattaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgactaa 50345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 122 - 293
Target Start/End: Complemental strand, 862 - 697
Alignment:
Q  122 caaagtaattgtcactttacaatgcaacaccaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgtt 221  Q
    |||| ||||||||||||||||||     |||| ||||| ||| | ||||| |||| ||||||||||| |||||||||||||||||||||| ||||    |    
T  862 caaaataattgtcactttacaat-----accattgcaacattgaatattt-tttccactattatacccttatttattgaatttcatccaatttaaacact 769  T
Q  222 ccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaat 293  Q
    |||||||||||||| ||||||  ||||||||||||| ||| ||||||||| ||||||||||| |||||||||    
T  768 ccactaactacaatcaataaaggtgttttagtaaatgctattaattttaccattgaaatcaacacaattaat 697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 136170 - 136011
Alignment:
Q  173 tttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttact 272  Q
    |||| ||||||||||| ||||||||| ||||||||| ||||||| |  | ||||||||| |||||||||   ||||||||||||| ||| |||||||||     
T  136170 tttctactattataccattatttatttaatttcatcaaacttaactacttcactaactataattaataagggtgttttagtaaatgctattaattttacc 136071  T
Q  273 attgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    ||||||||||| |  ||||||||||| | ||||||||||||| |||  ||||||||||||    
T  136070 attgaaatcaacattattaatcatttatttaataatcgtgcataaatcttaaacgactaa 136011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 180 - 330
Target Start/End: Original strand, 2014 - 2164
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||| ||||||||||||||||||| ||  |||||  |||||||||||||||||||||  ||||||||||||||  || ||||||||  |||||||    
T  2014 tattatacccttatttattgaatttcatcgaatgtaattaatccactaactacaattaataaggatgttttagtaaatgatattaattttatcattgaaa 2113  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgact 330  Q
    | || ||||||||||| |||  |||||||||||||  ||| ||||||||||    
T  2114 ttaacacaattaatcacttccttaataatcgtgcatgaaccttaaacgact 2164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 17017 - 17176
Alignment:
Q  173 tttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttact 272  Q
    |||| |||||||||  ||||||||||||||||||| |||| |||||   ||| |||||| |||||||||   |||| || ||||| |||||||||||||     
T  17017 tttccactattataattttatttattgaatttcattcaacgtaattacgccattaactataattaataagggtgttctaataaatgctactaattttacc 17116  T
Q  273 attgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgactaa 332  Q
    ||||||||||| ||||||||||||||   |||||||| |||| |||| ||||||||||||    
T  17117 attgaaatcaacacaattaatcattttcttaataatcatgcacaaaccttaaacgactaa 17176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 331
Target Start/End: Complemental strand, 8138 - 7956
Alignment:
Q  150 accaatgcaatatttattatttgtttca-actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgtt 248  Q
    |||||||||  ||||||||||| ||||  | ||| ||||| |||||||||||| ||||||||||||||||  |||||||||||||||||||||   ||||    
T  8138 accaatgcagcatttattatttttttcccattataatacccttatttattgaacttcatccaacttaattactccactaactacaattaataagggtgtt 8039  T
Q  249 ttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    || ||||||| || ||||||||| ||  ||||||| | |||||||||||||  |||||| ||||||  |||  ||||||||||    
T  8038 ttggtaaataatattaattttaccatccaaatcaacaaaattaatcatttccttaataaccgtgcatcaaccgtaaacgacta 7956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 312
Target Start/End: Original strand, 16097 - 16219
Alignment:
Q  190 ttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaat 289  Q
    ||||||||||||||||||||| ||||| || | || |||||||||||||||| | ||||||||||||| ||| ||||||||  ||| ||||||| |||||    
T  16097 ttatttattgaatttcatccatcttaactgcttcattaactacaattaataagtgtgttttagtaaatgctattaattttatcattaaaatcaacacaat 16196  T
Q  290 taatcatttctataataatcgtg 312  Q
    ||||||||||  |||||||||||    
T  16197 taatcatttccttaataatcgtg 16219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 183 - 328
Target Start/End: Original strand, 5382 - 5527
Alignment:
Q  183 tatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatca 282  Q
    |||||||||||||||||||||||||||||||||| |  ||||||||||| |||||||||  || |||||||||||  || ||||||||| |||||| |||    
T  5382 tatacctttatttattgaatttcatccaacttaactactccactaactaaaattaataaggatattttagtaaatgatattaattttaccattgaattca 5481  T
Q  283 atacaattaatcatttctataataatcgtgcaaaaactttaaacga 328  Q
    | ||| ||||||||||   |||||||| || | |||| ||||||||    
T  5482 acacagttaatcattttcttaataatcatgtacaaaccttaaacga 5527  T

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Target: scaffold0012 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 327
Target Start/End: Original strand, 105673 - 105820
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||| |||||||| ||||||||| |||||||| |  | |||||||||||||||||||   ||||||||||||  ||| ||||||||| |||||||    
T  105673 tattatacccttatttatcgaatttcattcaacttaactacttcactaactacaattaataagggtgttttagtaaacgctattaattttaccattgaaa 105772  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacg 327  Q
    | || ||||||||||||||   |||||||| |||| |||  |||||||    
T  105773 taaacacaattaatcatttacttaataatcatgcataaatcttaaacg 105820  T

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Target: scaffold0012; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 105586 - 105619
Alignment:
Q  75 attcgtctcacaattattgtctctttaacatttt 108  Q
    |||||||||| |||||||||||||||||||||||    
T  105586 attcgtctcataattattgtctctttaacatttt 105619  T

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Target: scaffold0110 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 331
Target Start/End: Original strand, 1693 - 1844
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||| ||||||||||||||| ||||||||||| |  |||||| |||||||||||||    ||||| |||||||  |||||||||||| ||  |||    
T  1693 tattatacccttatttattgaatttaatccaacttaactactccactgactacaattaatacgggtgtttaagtaaatgatactaattttaccatcaaaa 1792  T
Q  280 tcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||| | ||||||||||||   |||||| |||| | |||  |||||||||||    
T  1793 tcaacataattaatcattttcttaataaccgtgtataaatcttaaacgacta 1844  T

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Target: scaffold0182 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 180 - 298
Target Start/End: Complemental strand, 20479 - 20361
Alignment:
Q  180 tattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaa 279  Q
    ||||||||| | ||||||||||||||||||||||||| |  | |||||||| ||||||||||   | ||||| |||||  |||||||||||| ||  |||    
T  20479 tattataccctcatttattgaatttcatccaacttaactacttcactaactgcaattaataagggtattttactaaatgatactaattttacaatcaaaa 20380  T
Q  280 tcaatacaattaatcattt 298  Q
    |||| ||||||||||||||    
T  20379 tcaacacaattaatcattt 20361  T

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Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 328
Target Start/End: Original strand, 39127 - 39225
Alignment:
Q  230 tacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacga 328  Q
    ||||||||||||  ||||||||||||||  ||||||||| |  ||  ||||||| |||||||||||||||  ||||||| |||||||||| ||||||||    
T  39127 tacaattaataatgatgttttagtaaatgatactaatttcatcatcaaaatcaacacaattaatcatttccttaataattgtgcaaaaaccttaaacga 39225  T

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Target: scaffold0003; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 257
Target Start/End: Complemental strand, 252959 - 252854
Alignment:
Q  150 accaatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttt 249  Q
    |||||||||| ||||||||||| |||||  ||||||||  |||||||||||||||||| |||||||| |  |||| | ||||||||||||||  || |||    
T  252959 accaatgcaacatttattatttttttcat-tattatactcttatttattgaatttcattcaacttaactactccaat-actacaattaataacgatattt 252862  T
Q  250 tagtaaat 257  Q
    ||||||||    
T  252861 tagtaaat 252854  T

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Target: scaffold0003; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 331
Target Start/End: Complemental strand, 252575 - 252504
Alignment:
Q  260 tactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||||||||| ||| ||||||| | |||||||||||||| |||||||| | |  |||| |||||||||||    
T  252575 tactaattttaccattaaaatcaacataattaatcatttctttaataatcatacgcaaaccttaaacgacta 252504  T

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Target: scaffold0016 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 76253 - 76317
Alignment:
Q  152 caatgcaatatttattatttgtttcaactattatacctttatttattgaatttcatccaacttaa 216  Q
    ||||||| |||||||||||| |||  ||||||||||| ||||||||||||||||||| |||||||    
T  76253 caatgcagtatttattattttttttgactattatacccttatttattgaatttcatctaacttaa 76317  T

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Target: scaffold1391 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1391
Description:

Target: scaffold1391; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 325
Target Start/End: Complemental strand, 1897 - 1798
Alignment:
Q  226 taactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaa 325  Q
    |||||| ||||||||||  |||||||||||||  || |||||| |||||  ||||||| ||||||||| ||||   ||||||||||||| ||||||||||    
T  1897 taactataattaataaaggtgttttagtaaatgatattaatttgactatcaaaatcaacacaattaattattttcttaataatcgtgcataaactttaaa 1798  T

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Target: scaffold0188 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 299
Target Start/End: Original strand, 6741 - 6845
Alignment:
Q  194 ttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatcaatacaattaat 293  Q
    ||||| |||||||||  |||||| | ||| | |||||| |||||||||| |  |||||||||||| |||||||||||  |||||||| || |||||||||    
T  6741 ttattaaatttcatcatacttaactattctagtaacta-aattaataaagacattttagtaaataatactaattttatcattgaaattaaaacaattaat 6839  T
Q  294 catttc 299  Q
    ||||||    
T  6840 catttc 6845  T

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Target: scaffold0068 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 56659 - 56708
Alignment:
Q  189 tttatttattgaatttcatccaacttaattgttccactaactacaattaa 238  Q
    |||| |||||||||||| |||||||||||| |||||||||||||||||||    
T  56659 tttagttattgaatttcttccaacttaattattccactaactacaattaa 56708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 298
Target Start/End: Complemental strand, 14296 - 14178
Alignment:
Q  178 actattatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattga 277  Q
    ||||||||||||||||||||||||||||||| || |||| |  |||| |||||| |||||||||| |   ||   |||||  |||||||||||| ||| |    
T  14296 actattatacctttatttattgaatttcatcaaatttaactactccattaactataattaataaaaaaaatt--ataaatgatactaattttacgattaa 14199  T
Q  278 aatcaatacaattaatcattt 298  Q
    |||||| ||| ||||||||||    
T  14198 aatcaacacatttaatcattt 14178  T

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Target: scaffold0015 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 183 - 299
Target Start/End: Original strand, 42869 - 42985
Alignment:
Q  183 tatacctttatttattgaatttcatccaacttaattgttccactaactacaattaataaatatgttttagtaaatactactaattttactattgaaatca 282  Q
    ||||| ||||||||||||||||||    |||||||| || |||||| || |||||||||  ||||||||| |||   || |||||||||||||||||| |    
T  42869 tatacatttatttattgaatttcacttcacttaattatttcactaattataattaataagaatgttttagcaaaatatattaattttactattgaaatta 42968  T
Q  283 atacaattaatcatttc 299  Q
    || ||  ||||||||||    
T  42969 attcatctaatcatttc 42985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 331
Target Start/End: Complemental strand, 6331 - 6260
Alignment:
Q  260 tactaattttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||||||||||  |||  |||||| |||||||||||||||  ||| ||||||||| ||||||||||||||||    
T  6331 tactaattttatcattagaatcaacacaattaatcatttcgttaaaaatcgtgcacaaactttaaacgacta 6260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0470 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 312
Target Start/End: Original strand, 1050 - 1106
Alignment:
Q  256 atactactaattttactattgaaatcaatacaattaatcatttctataataatcgtg 312  Q
    |||| ||||||||||| ||||||||||| | |||||||||||| | |||||||||||    
T  1050 ataccactaattttaccattgaaatcaacataattaatcatttttttaataatcgtg 1106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 331
Target Start/End: Complemental strand, 3750 - 3687
Alignment:
Q  268 ttactattgaaatcaatacaattaatcatttctataataatcgtgcaaaaactttaaacgacta 331  Q
    |||| ||||||||||||||||| |||||||| | ||||| ||||| | ||||||||||| ||||    
T  3750 ttaccattgaaatcaatacaatcaatcatttttttaatagtcgtgtacaaactttaaacaacta 3687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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