View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4793-Insertion-15 (Length: 469)
Name: NF4793-Insertion-15
Description: NF4793
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4793-Insertion-15 |
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Alignment Details
Target: chr1 (Bit Score: 398; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 398; E-Value: 0
Query Start/End: Original strand, 8 - 461
Target Start/End: Complemental strand, 8406104 - 8405648
Alignment:
| Q |
8 |
ttgtgacaccatatgttttagtctaagaacataagcctaggttaacaacaaggttccgtggttatcctgtttgggagataatctagtattttgcctatcg |
107 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
8406104 |
ttgtgacatcatatgttttagtctaagaacataagcctaggttaacaacaaggttcgctggttatcctgtttgggagataatctagtattttgcctatcg |
8406005 |
T |
|
| Q |
108 |
tgattgcctcacgagcaaacatttcagagatgtggcattagtcttttgagaatcgt-tgaagtgtaccattatctctctaccctttatgcttttataaac |
206 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
8406004 |
tgattgcctcacgagcaaacatttcagagatgtggcattagtcttttgagaatcgtgtgaagtgtaccgttatctctctaccctttatgcttttataaac |
8405905 |
T |
|
| Q |
207 |
gttacatttccaaggtctggacttatcccttttgttaggtcaaaccctaatttaggcgtatgatccccaacaaatattctcccatgattgacaataatta |
306 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |
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| T |
8405904 |
gttacatttccaaggtttggacttatcccttttgttaggtcaaaccctaatttaggcgtatgatccccaacatatattctcccatgattaacaataatta |
8405805 |
T |
|
| Q |
307 |
ggtgagggacatggaatgga--cacaactctgtatggaaatggtattttacggttggagtcttatctaaccgaccgagcatgctagccatgagtaggtct |
404 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8405804 |
ggtgagggacatggaatggacacacaactctgtatggaaatggtcttttacagttggagtcttatctaaccgaccgagcatgctagccatgagtaggtct |
8405705 |
T |
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| Q |
405 |
aagcttaatattagatcatgctcacttaacccgtccttctgcctatgtctcaatcaa |
461 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
8405704 |
aagcttaatattagatcatgctcacttaacccgtccctctgcctatgtctcaatcaa |
8405648 |
T |
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