View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4793-Insertion-16 (Length: 465)
Name: NF4793-Insertion-16
Description: NF4793
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4793-Insertion-16 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 437; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 437; E-Value: 0
Query Start/End: Original strand, 13 - 465
Target Start/End: Original strand, 45143792 - 45144244
Alignment:
| Q |
13 |
taactacaaagtgggcattgaactaacccattttcattacaatcaacacacttaacaacaacagtgttcccctgtttctgtttattcaccatcttacagc |
112 |
Q |
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|||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45143792 |
taactacaaattgggcactgaactaacccattttcattacaatcaccacacttaacaacaacagtgttcccctgtttctgtttattcaccatcttacagc |
45143891 |
T |
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| Q |
113 |
ttccgttacatcgaaaacaaggcaagaatctcatatcaccacaaccctcacatacacctcctccaccaacagcttttcttggcaaaccctgaataacctc |
212 |
Q |
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| T |
45143892 |
ttccgttacatcgaaaacaaggcaagaatctcatatcaccacaaccctcacatacacctcctccaccaacagcttttcttggcaaaccctgaataacctc |
45143991 |
T |
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| Q |
213 |
tcccaacaaaccctcttccacaaccttcaacatctcttcagcaccaccgatataatatcccttcacaaacactctcggcggaatcaccatcttctctttc |
312 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
45143992 |
tcccaacaaaccctcttccacaaccttcaacatctcttcagcaccaccgatataatatcccttcacaaacactctcggcggaaccaccatcttctctttc |
45144091 |
T |
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| Q |
313 |
agaagctccctcagttcctctttaaacccactatccatcgaaacgtcacgctcgcatatttgtacaccaaatgcatcaaaagctgctctcaccgcattgc |
412 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45144092 |
agaagctccctcagttcctctttaaacccactatccatcgaaacgtcacgctcgcatatttgtacaccaaatgcatcaaaagctgctctcaccgcattgc |
45144191 |
T |
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| Q |
413 |
aagcctcaaatgtcctccgaacacctctcaacgttgttgtatagatcaccact |
465 |
Q |
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| T |
45144192 |
aagcctcaaatgtcctccgaacacctctcaacgttgttgtatagatcaccact |
45144244 |
T |
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